Miyakogusa Predicted Gene

Lj1g3v4139540.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4139540.2 CUFF.31994.2
         (152 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G38090.1 | Symbols:  | Duplicated homeodomain-like superfamil...   183   3e-47
AT3G11280.2 | Symbols:  | Duplicated homeodomain-like superfamil...   176   5e-45
AT3G11280.1 | Symbols:  | Duplicated homeodomain-like superfamil...   176   5e-45
AT5G05790.1 | Symbols:  | Duplicated homeodomain-like superfamil...   170   3e-43
AT5G58900.1 | Symbols:  | Homeodomain-like transcriptional regul...   163   4e-41
AT5G01200.1 | Symbols:  | Duplicated homeodomain-like superfamil...   147   2e-36
AT5G08520.1 | Symbols:  | Duplicated homeodomain-like superfamil...   123   4e-29
AT1G49010.1 | Symbols:  | Duplicated homeodomain-like superfamil...   115   1e-26
AT5G04760.1 | Symbols:  | Duplicated homeodomain-like superfamil...   110   3e-25
AT5G23650.1 | Symbols:  | Homeodomain-like transcriptional regul...   110   4e-25
AT3G10580.1 | Symbols:  | Homeodomain-like superfamily protein |...    95   2e-20
AT3G10580.2 | Symbols:  | Homeodomain-like superfamily protein |...    95   2e-20
AT5G47390.1 | Symbols:  | myb-like transcription factor family p...    94   4e-20
AT5G56840.1 | Symbols:  | myb-like transcription factor family p...    93   6e-20
AT1G70000.2 | Symbols:  | myb-like transcription factor family p...    93   6e-20
AT1G70000.1 | Symbols:  | myb-like transcription factor family p...    93   6e-20
AT3G16350.1 | Symbols:  | Homeodomain-like superfamily protein |...    91   3e-19
AT1G19000.2 | Symbols:  | Homeodomain-like superfamily protein |...    89   1e-18
AT1G19000.1 | Symbols:  | Homeodomain-like superfamily protein |...    89   1e-18
AT5G61620.1 | Symbols:  | myb-like transcription factor family p...    88   2e-18
AT1G74840.1 | Symbols:  | Homeodomain-like superfamily protein |...    86   9e-18
AT4G09450.1 | Symbols:  | Duplicated homeodomain-like superfamil...    86   9e-18
AT1G74840.2 | Symbols:  | Homeodomain-like superfamily protein |...    86   1e-17
AT3G10590.1 | Symbols:  | Duplicated homeodomain-like superfamil...    79   2e-15
AT1G75250.1 | Symbols: ATRL6, RSM3, RL6 | RAD-like 6 | chr1:2824...    68   2e-12
AT1G75250.2 | Symbols: ATRL6, RSM3, RL6 | RAD-like 6 | chr1:2824...    68   3e-12
AT4G39250.1 | Symbols: ATRL1, RSM2, RL1 | RAD-like 1 | chr4:1827...    65   2e-11
AT3G10595.1 | Symbols:  | Duplicated homeodomain-like superfamil...    63   1e-10
AT2G21650.1 | Symbols: MEE3, ATRL2, RSM1 | Homeodomain-like supe...    62   2e-10
AT3G10585.1 | Symbols:  | Homeodomain-like superfamily protein |...    54   4e-08
AT1G18330.2 | Symbols: EPR1, RVE7 | Homeodomain-like superfamily...    53   7e-08
AT3G10113.1 | Symbols:  | Homeodomain-like superfamily protein |...    53   7e-08
AT1G18330.1 | Symbols: EPR1, RVE7 | Homeodomain-like superfamily...    53   7e-08
AT1G19510.1 | Symbols: ATRL5, RSM4, RL5 | RAD-like 5 | chr1:6756...    53   8e-08
AT2G18328.1 | Symbols: ATRL4, RL4 | RAD-like 4 | chr2:7964478-79...    50   5e-07
AT3G09600.1 | Symbols:  | Homeodomain-like superfamily protein |...    50   6e-07
AT3G09600.2 | Symbols:  | Homeodomain-like superfamily protein |...    50   6e-07
AT4G36570.1 | Symbols: ATRL3, RL3 | RAD-like 3 | chr4:17254660-1...    50   8e-07
AT1G01520.1 | Symbols:  | Homeodomain-like superfamily protein |...    48   2e-06
AT4G01280.1 | Symbols:  | Homeodomain-like superfamily protein |...    48   3e-06
AT4G01280.2 | Symbols:  | Homeodomain-like superfamily protein |...    48   3e-06
AT2G46830.1 | Symbols: CCA1 | circadian clock associated 1 | chr...    47   3e-06
AT5G52660.2 | Symbols:  | Homeodomain-like superfamily protein |...    47   6e-06
AT5G52660.1 | Symbols:  | Homeodomain-like superfamily protein |...    47   6e-06
AT5G37260.1 | Symbols: RVE2, CIR1 | Homeodomain-like superfamily...    47   6e-06

>AT2G38090.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr2:15945278-15946775 FORWARD LENGTH=298
          Length = 298

 Score =  183 bits (465), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 97/189 (51%), Positives = 120/189 (63%), Gaps = 38/189 (20%)

Query: 1   MDLKTFYSNSNYFVQKSAPTEWTREDNEKFESAVSIYDKDTPDRWLKVAAMIPGKTVFDV 60
           M   T+   SN+  Q++  T+WT E+N+KFE+A++ YDKDTPDRW +VAAM+PGKTV DV
Sbjct: 8   MSPATYLETSNWLFQENRGTKWTAEENKKFENALAFYDKDTPDRWSRVAAMLPGKTVGDV 67

Query: 61  IKKFKELE-DILGIEAGHVPIPATVR---------------------------------- 85
           IK+++ELE D+  IEAG +PIP                                      
Sbjct: 68  IKQYRELEEDVSDIEAGLIPIPGYASDSFTLDWGGYDGASGNNGFNMNGYYFSAAGGKRG 127

Query: 86  --VRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLTKTPTQVASHARKYY 143
              R   H RKKGVPWTEEEHR FLMGL+KYG GDWRNIARNFV T+TPTQVASHA+KY+
Sbjct: 128 SAARTAEHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYF 187

Query: 144 KKQKVSGDK 152
            +Q V+G K
Sbjct: 188 IRQ-VNGGK 195


>AT3G11280.2 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr3:3533477-3534393 REVERSE LENGTH=263
          Length = 263

 Score =  176 bits (446), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 88/150 (58%), Positives = 110/150 (73%), Gaps = 20/150 (13%)

Query: 22  WTREDNEKFESAVSIYDKDTPDRWLKVAAMIPGKTVFDVIKKFKELE-DILGIEAGHVPI 80
           WT+E+N+ FE A++IY +D+PDRW KVA+MIPGKTVFDV+K++ +LE D+  IEAG VPI
Sbjct: 33  WTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDVMKQYSKLEEDVFDIEAGRVPI 92

Query: 81  PA------------------TVRVRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNI 122
           P                       RG +  RKKGVPWTEEEHR FL+GL KYG GDWRNI
Sbjct: 93  PGYPAASSPLGFDTDMCRKRPSGARGSDQDRKKGVPWTEEEHRRFLLGLLKYGKGDWRNI 152

Query: 123 ARNFVLTKTPTQVASHARKYYKKQKVSGDK 152
           +RNFV++KTPTQVASHA+KYY++Q +SG K
Sbjct: 153 SRNFVVSKTPTQVASHAQKYYQRQ-LSGAK 181


>AT3G11280.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr3:3533477-3534393 REVERSE LENGTH=263
          Length = 263

 Score =  176 bits (446), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 88/150 (58%), Positives = 110/150 (73%), Gaps = 20/150 (13%)

Query: 22  WTREDNEKFESAVSIYDKDTPDRWLKVAAMIPGKTVFDVIKKFKELE-DILGIEAGHVPI 80
           WT+E+N+ FE A++IY +D+PDRW KVA+MIPGKTVFDV+K++ +LE D+  IEAG VPI
Sbjct: 33  WTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDVMKQYSKLEEDVFDIEAGRVPI 92

Query: 81  PA------------------TVRVRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNI 122
           P                       RG +  RKKGVPWTEEEHR FL+GL KYG GDWRNI
Sbjct: 93  PGYPAASSPLGFDTDMCRKRPSGARGSDQDRKKGVPWTEEEHRRFLLGLLKYGKGDWRNI 152

Query: 123 ARNFVLTKTPTQVASHARKYYKKQKVSGDK 152
           +RNFV++KTPTQVASHA+KYY++Q +SG K
Sbjct: 153 SRNFVVSKTPTQVASHAQKYYQRQ-LSGAK 181


>AT5G05790.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr5:1740724-1741671 REVERSE LENGTH=277
          Length = 277

 Score =  170 bits (431), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 87/158 (55%), Positives = 110/158 (69%), Gaps = 26/158 (16%)

Query: 20  TEWTREDNEKFESAVSIYDKDTPDRWLKVAAMIPGKTVFDVIKKFKELE-DILGIEAGHV 78
           + WT+E+N+KFE A+++Y  DTPDRW KVAAMIPGKT+ DV++++ +LE D+  IEAG V
Sbjct: 29  SSWTKEENKKFERALAVYADDTPDRWFKVAAMIPGKTISDVMRQYSKLEEDLFDIEAGLV 88

Query: 79  PIPATVRV------------------------RGPNHVRKKGVPWTEEEHRGFLMGLQKY 114
           PIP    V                        RG +  R+KGVPWTEEEHR FL+GL KY
Sbjct: 89  PIPGYRSVTPCGFDQVVSPRDFDAYRKLPNGARGFDQDRRKGVPWTEEEHRRFLLGLLKY 148

Query: 115 GIGDWRNIARNFVLTKTPTQVASHARKYYKKQKVSGDK 152
           G GDWRNI+RNFV +KTPTQVASHA+KYY++Q +SG K
Sbjct: 149 GKGDWRNISRNFVGSKTPTQVASHAQKYYQRQ-LSGAK 185


>AT5G58900.1 | Symbols:  | Homeodomain-like transcriptional
           regulator | chr5:23783275-23784667 REVERSE LENGTH=288
          Length = 288

 Score =  163 bits (413), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 83/163 (50%), Positives = 108/163 (66%), Gaps = 33/163 (20%)

Query: 22  WTREDNEKFESAVSIYDKDTPDRWLKVAAMIPGKTVFDVIKKFKELE-DILGIEAGHVPI 80
           WT  +N+ FE+A+++YD +TPDRW KVAA+IPGKTV DVI+++ +LE D+  IEAG +P+
Sbjct: 34  WTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQYNDLEADVSSIEAGLIPV 93

Query: 81  PATVRV-------------------------------RGPNHVRKKGVPWTEEEHRGFLM 109
           P  +                                 R P   RKKGVPWTEEEH+ FLM
Sbjct: 94  PGYITSPPFTLDWAGGGGGCNGFKPGHQVCNKRSQAGRSPELERKKGVPWTEEEHKLFLM 153

Query: 110 GLQKYGIGDWRNIARNFVLTKTPTQVASHARKYYKKQKVSGDK 152
           GL+KYG GDWRNI+RNFV+T+TPTQVASHA+KY+ +Q +SG K
Sbjct: 154 GLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQ-LSGGK 195


>AT5G01200.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr5:77116-78294 FORWARD LENGTH=267
          Length = 267

 Score =  147 bits (372), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 82/184 (44%), Positives = 107/184 (58%), Gaps = 41/184 (22%)

Query: 8   SNSNYFVQKSAPTEWTREDNEKFESAVS-IYDKDTPDRWLKVAAMIPGKTVFDVIKKFKE 66
           +N+N+  Q+     WT E+N++FE A++ + DKD  + W K+A +IPGKTV DVIK++KE
Sbjct: 16  ANTNWIFQEVREATWTAEENKRFEKALAYLDDKDNLESWSKIADLIPGKTVADVIKRYKE 75

Query: 67  LED-ILGIEAGHVPIPA---------------------------------------TVRV 86
           LED +  IEAG +PIP                                          R 
Sbjct: 76  LEDDVSDIEAGLIPIPGYGGDASSAANSDYFFGLENSSYGYDYVVGGKRSSPAMTDCFRS 135

Query: 87  RGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLTKTPTQVASHARKYYKKQ 146
             P   RKKGVPWTE+EH  FLMGL+KYG GDWRNIA++FV T+TPTQVASHA+KY+ +Q
Sbjct: 136 PMPEKERKKGVPWTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYFLRQ 195

Query: 147 KVSG 150
              G
Sbjct: 196 LTDG 199


>AT5G08520.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr5:2755470-2757741 REVERSE LENGTH=298
          Length = 298

 Score =  123 bits (309), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 65/153 (42%), Positives = 92/153 (60%), Gaps = 31/153 (20%)

Query: 22  WTREDNEKFESAVSIYDKDTPDRWLKVAAMIPGKTVFDVIKKFKEL-EDILGIEAGHVPI 80
           W+RED+  FE A++    ++ +RW K+AA +PGK+V  + + ++ L ED+  IE+G VP+
Sbjct: 12  WSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVEDVTRIESGCVPL 71

Query: 81  PATVRVRGPN------------------------------HVRKKGVPWTEEEHRGFLMG 110
           PA     G N                                R+KG+ WTE+EHR FL+G
Sbjct: 72  PAYGSPEGSNGHAGDEGASSKKGGNSHAGESNQAGKSKSDQERRKGIAWTEDEHRLFLLG 131

Query: 111 LQKYGIGDWRNIARNFVLTKTPTQVASHARKYY 143
           L KYG GDWR+I+RNFV+T+TPTQVASHA+KY+
Sbjct: 132 LDKYGKGDWRSISRNFVVTRTPTQVASHAQKYF 164


>AT1G49010.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr1:18132714-18133778 FORWARD LENGTH=314
          Length = 314

 Score =  115 bits (287), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/173 (36%), Positives = 97/173 (56%), Gaps = 51/173 (29%)

Query: 22  WTREDNEKFESAVSIY---DKDTPDRWLKVAAMIPGKTVFDVIKKFK-ELEDILGIEAGH 77
           W+RE+ + FE+A++++   ++ T D+W K+++M+P K + +V K ++  LED+  IE G 
Sbjct: 8   WSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLEDVKAIENGQ 67

Query: 78  VPIPATVRVRG---------------------------PN-------------------- 90
           VP+P     +G                           PN                    
Sbjct: 68  VPLPRYHHRKGLIVDEAAAAATSPANRDSHSSGSSEKKPNPGTSGISSSNGGRSGGSRAE 127

Query: 91  HVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLTKTPTQVASHARKYY 143
             R+KG+PWTEEEHR FL+GL K+G GDWR+I+RNFV+++TPTQVASHA+KY+
Sbjct: 128 QERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYF 180


>AT5G04760.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr5:1373752-1374529 REVERSE LENGTH=215
          Length = 215

 Score =  110 bits (275), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 93/148 (62%), Gaps = 20/148 (13%)

Query: 18  APTEWTREDNEKFESAVSIYDKDTPDRWLKVAAMIPGKTVFDVIKKFKEL-EDILGIEAG 76
           A ++WTR +++ FE A+ ++ + +P+RW ++A  +  K+  +V + ++ L  D+  I++G
Sbjct: 2   ASSQWTRSEDKMFEQALVLFPEGSPNRWERIADQL-HKSAGEVREHYEVLVHDVFEIDSG 60

Query: 77  HVPIPATVRVR---------------GPNH---VRKKGVPWTEEEHRGFLMGLQKYGIGD 118
            V +P  +                  G  H    RK+G PWTE EH+ FL+GL++YG GD
Sbjct: 61  RVDVPDYMDDSAAAAAGWDSAGQISFGSKHGESERKRGTPWTENEHKLFLIGLKRYGKGD 120

Query: 119 WRNIARNFVLTKTPTQVASHARKYYKKQ 146
           WR+I+RN V+T+TPTQVASHA+KY+ +Q
Sbjct: 121 WRSISRNVVVTRTPTQVASHAQKYFLRQ 148


>AT5G23650.1 | Symbols:  | Homeodomain-like transcriptional
           regulator | chr5:7969812-7971019 FORWARD LENGTH=337
          Length = 337

 Score =  110 bits (275), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 91/159 (57%), Gaps = 32/159 (20%)

Query: 17  SAPTEWTREDNEKFESAVSIYDKDTPDRWLKVAAMIPGKTVFDVIKKFKEL-EDILGIEA 75
           S  + W+++D+  FE A++IY+  T  RW K+A ++PGKT+  VI+ +  L  D++ IE+
Sbjct: 8   SVGSSWSKDDDIAFEKALAIYNDKTEIRWKKIATVVPGKTLEQVIEHYNILARDVMLIES 67

Query: 76  GHVPIPATVR-VRGPNHV------------------------------RKKGVPWTEEEH 104
           G V +P     +  PNH                               R++GVPW   EH
Sbjct: 68  GCVRLPDYDDFLEEPNHNAFGKERSILEGGNDRKYESKHKGKSKLKQKRRRGVPWKPFEH 127

Query: 105 RGFLMGLQKYGIGDWRNIARNFVLTKTPTQVASHARKYY 143
           R FL GL+KYG GDWR+I+R+ V+T+T TQVASHA+KY+
Sbjct: 128 RQFLHGLKKYGKGDWRSISRHCVVTRTSTQVASHAQKYF 166


>AT3G10580.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr3:3307083-3308230 REVERSE LENGTH=287
          Length = 287

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 12/138 (8%)

Query: 22  WTREDNEKFESAVSIYDKDTPDRWLKVAAMIPGKTVFDVIKKFKEL-EDILGIEAGHVPI 80
           W R+D+++FE A+  +  +    +L+  A    K + +V   ++ L +D+  IE+G  P+
Sbjct: 8   WKRDDDKRFELALVRFPAEGSPDFLENIAQFLQKPLKEVYSYYQALVDDVTLIESGKYPL 67

Query: 81  P-----------ATVRVRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLT 129
           P              + +     +KKG+PW+ EEHR FL GL KYG GDW++I+R  V +
Sbjct: 68  PKYPEDDYVSLPEATKSKTQGTGKKKGIPWSPEEHRLFLDGLNKYGKGDWKSISRECVTS 127

Query: 130 KTPTQVASHARKYYKKQK 147
           ++P QVASHA+KY+ +QK
Sbjct: 128 RSPMQVASHAQKYFLRQK 145


>AT3G10580.2 | Symbols:  | Homeodomain-like superfamily protein |
           chr3:3307083-3308230 REVERSE LENGTH=256
          Length = 256

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 12/138 (8%)

Query: 22  WTREDNEKFESAVSIYDKDTPDRWLKVAAMIPGKTVFDVIKKFKEL-EDILGIEAGHVPI 80
           W R+D+++FE A+  +  +    +L+  A    K + +V   ++ L +D+  IE+G  P+
Sbjct: 8   WKRDDDKRFELALVRFPAEGSPDFLENIAQFLQKPLKEVYSYYQALVDDVTLIESGKYPL 67

Query: 81  P-----------ATVRVRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLT 129
           P              + +     +KKG+PW+ EEHR FL GL KYG GDW++I+R  V +
Sbjct: 68  PKYPEDDYVSLPEATKSKTQGTGKKKGIPWSPEEHRLFLDGLNKYGKGDWKSISRECVTS 127

Query: 130 KTPTQVASHARKYYKKQK 147
           ++P QVASHA+KY+ +QK
Sbjct: 128 RSPMQVASHAQKYFLRQK 145


>AT5G47390.1 | Symbols:  | myb-like transcription factor family
           protein | chr5:19227001-19228546 FORWARD LENGTH=365
          Length = 365

 Score = 93.6 bits (231), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 40/55 (72%), Positives = 47/55 (85%)

Query: 93  RKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLTKTPTQVASHARKYYKKQK 147
           RKKG PWTEEEHR FL+GLQK G GDWR I+RN+V T+TPTQVASHA+KY+ +Q 
Sbjct: 92  RKKGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQS 146


>AT5G56840.1 | Symbols:  | myb-like transcription factor family
           protein | chr5:22980789-22982152 FORWARD LENGTH=233
          Length = 233

 Score = 93.2 bits (230), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 40/57 (70%), Positives = 49/57 (85%)

Query: 93  RKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLTKTPTQVASHARKYYKKQKVS 149
           RKKGVPWT EEHR FL+GL+K G GDWR I+RNFV+TK+PTQVASHA+KY+ +Q  +
Sbjct: 87  RKKGVPWTAEEHRTFLIGLEKLGKGDWRGISRNFVVTKSPTQVASHAQKYFLRQTTT 143


>AT1G70000.2 | Symbols:  | myb-like transcription factor family
           protein | chr1:26363674-26364635 REVERSE LENGTH=261
          Length = 261

 Score = 93.2 bits (230), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 53/83 (63%)

Query: 61  IKKFKELEDILGIEAGHVPIPATVRVRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWR 120
           + +F +  D    + G       V   G N  RK+G PWTEEEHR FL GL K G GDWR
Sbjct: 62  LSQFDQTPDPNPTDDGGYASDDVVHASGRNRERKRGTPWTEEEHRLFLTGLHKVGKGDWR 121

Query: 121 NIARNFVLTKTPTQVASHARKYY 143
            I+RNFV T+TPTQVASHA+KY+
Sbjct: 122 GISRNFVKTRTPTQVASHAQKYF 144


>AT1G70000.1 | Symbols:  | myb-like transcription factor family
           protein | chr1:26363674-26364635 REVERSE LENGTH=261
          Length = 261

 Score = 93.2 bits (230), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 53/83 (63%)

Query: 61  IKKFKELEDILGIEAGHVPIPATVRVRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWR 120
           + +F +  D    + G       V   G N  RK+G PWTEEEHR FL GL K G GDWR
Sbjct: 62  LSQFDQTPDPNPTDDGGYASDDVVHASGRNRERKRGTPWTEEEHRLFLTGLHKVGKGDWR 121

Query: 121 NIARNFVLTKTPTQVASHARKYY 143
            I+RNFV T+TPTQVASHA+KY+
Sbjct: 122 GISRNFVKTRTPTQVASHAQKYF 144


>AT3G16350.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr3:5547828-5549397 FORWARD LENGTH=387
          Length = 387

 Score = 90.9 bits (224), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 38/51 (74%), Positives = 46/51 (90%)

Query: 93  RKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLTKTPTQVASHARKYY 143
           RK+GVPWTEEEHR FL+GLQK G GDWR I+RN+V ++TPTQVASHA+KY+
Sbjct: 133 RKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVASHAQKYF 183


>AT1G19000.2 | Symbols:  | Homeodomain-like superfamily protein |
           chr1:6561335-6562684 REVERSE LENGTH=285
          Length = 285

 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 39/79 (49%), Positives = 55/79 (69%)

Query: 65  KELEDILGIEAGHVPIPATVRVRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNIAR 124
            E +  + +  G+      V++   +  RK+GVPWTE EH+ FL+GLQK G GDW+ I+R
Sbjct: 70  NETDATVIVADGYASANDAVQISSSSGGRKRGVPWTENEHKRFLIGLQKVGKGDWKGISR 129

Query: 125 NFVLTKTPTQVASHARKYY 143
           NFV ++TPTQVASHA+KY+
Sbjct: 130 NFVKSRTPTQVASHAQKYF 148


>AT1G19000.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr1:6561335-6562684 REVERSE LENGTH=285
          Length = 285

 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 39/79 (49%), Positives = 55/79 (69%)

Query: 65  KELEDILGIEAGHVPIPATVRVRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNIAR 124
            E +  + +  G+      V++   +  RK+GVPWTE EH+ FL+GLQK G GDW+ I+R
Sbjct: 70  NETDATVIVADGYASANDAVQISSSSGGRKRGVPWTENEHKRFLIGLQKVGKGDWKGISR 129

Query: 125 NFVLTKTPTQVASHARKYY 143
           NFV ++TPTQVASHA+KY+
Sbjct: 130 NFVKSRTPTQVASHAQKYF 148


>AT5G61620.1 | Symbols:  | myb-like transcription factor family
           protein | chr5:24772383-24773507 FORWARD LENGTH=317
          Length = 317

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 39/59 (66%), Positives = 48/59 (81%)

Query: 91  HVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLTKTPTQVASHARKYYKKQKVS 149
           H +KKG PWTEEEHR FL+GL K G GDWR IA++FV T+TPTQVASHA+KY+ +  V+
Sbjct: 102 HEKKKGKPWTEEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIRLNVN 160


>AT1G74840.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr1:28116201-28117317 REVERSE LENGTH=265
          Length = 265

 Score = 85.9 bits (211), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 36/51 (70%), Positives = 45/51 (88%)

Query: 93  RKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLTKTPTQVASHARKYY 143
           RK+GVPWTEEEH+ FL+GLQ+ G GDW+ I+RNFV T+T TQVASHA+KY+
Sbjct: 92  RKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQKYF 142


>AT4G09450.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr4:5983277-5984500 FORWARD LENGTH=200
          Length = 200

 Score = 85.9 bits (211), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 82/141 (58%), Gaps = 11/141 (7%)

Query: 17  SAPTEWTREDNEKFESAVSIYDKDTPDRWLKVAAMIPGKTVFDVIKKFKEL-EDILGIEA 75
           +A  +WTR D+++FE A+    + +P+ +++  A    K V +V   +  L  DI  IE+
Sbjct: 2   AAFPQWTRVDDKRFELALLQIPEGSPN-FIENIAYYLQKPVKEVEYYYCALVHDIERIES 60

Query: 76  GHVPIP---------ATVRVRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNF 126
           G   +P          T       + +K G+PW+EEE R FL GL K+G GDW+NI+R  
Sbjct: 61  GKYVLPKYPEDDYVKLTEAGESKGNGKKTGIPWSEEEQRLFLEGLNKFGKGDWKNISRYC 120

Query: 127 VLTKTPTQVASHARKYYKKQK 147
           V ++T TQVASHA+KY+ +QK
Sbjct: 121 VKSRTSTQVASHAQKYFARQK 141


>AT1G74840.2 | Symbols:  | Homeodomain-like superfamily protein |
           chr1:28116201-28117317 REVERSE LENGTH=239
          Length = 239

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 36/51 (70%), Positives = 45/51 (88%)

Query: 93  RKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLTKTPTQVASHARKYY 143
           RK+GVPWTEEEH+ FL+GLQ+ G GDW+ I+RNFV T+T TQVASHA+KY+
Sbjct: 92  RKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQKYF 142


>AT3G10590.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr3:3310424-3311311 REVERSE LENGTH=206
          Length = 206

 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 80/161 (49%), Gaps = 32/161 (19%)

Query: 22  WTREDNEKFESAVSIYDKDTPDRWLKVAAMIPG----------KTVFDV----------- 60
           WT +DN +F+SA+S +  D   R + VA  +P           K V DV           
Sbjct: 7   WTEDDNRRFKSALSQFPPDN-KRLVNVAQHLPKPLEEVKYYYEKLVNDVYLPKPLENVTQ 65

Query: 61  -IKKFKELEDI------LGIEAGHVPIPATVRVRGPNHVRKKGVP--WTEEEHRGFLMGL 111
            ++K  E+E++      +  +   +P    +     +  RKK  P  WTEEEHR FL GL
Sbjct: 66  HLQKPMEMEEMKYMYEKMANDVNQMPEYVPLAESSQSKRRKKDTPNPWTEEEHRLFLQGL 125

Query: 112 QKYGIGDWRNIARNFVLTKTPTQVASHARKYYKKQKVSGDK 152
           +KYG G     + NFV TKTP QV+SHA +YYK+QK    K
Sbjct: 126 KKYGEGASTLTSTNFVKTKTPRQVSSHA-QYYKRQKSDNKK 165


>AT1G75250.1 | Symbols: ATRL6, RSM3, RL6 | RAD-like 6 |
          chr1:28245073-28245453 REVERSE LENGTH=126
          Length = 126

 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 1/68 (1%)

Query: 15 QKSAPTEWTREDNEKFESAVSIYDKDTPDRWLKVAAMIPGKTVFDVIKKFKEL-EDILGI 73
           +S+ + WT   N+ FE A+++YDKDTPDRW  VA  + GKTV +V + +  L ED++ I
Sbjct: 5  SRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINI 64

Query: 74 EAGHVPIP 81
          E G VP+P
Sbjct: 65 ETGRVPLP 72


>AT1G75250.2 | Symbols: ATRL6, RSM3, RL6 | RAD-like 6 |
          chr1:28244463-28245453 REVERSE LENGTH=97
          Length = 97

 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 1/68 (1%)

Query: 15 QKSAPTEWTREDNEKFESAVSIYDKDTPDRWLKVAAMIPGKTVFDVIKKFKEL-EDILGI 73
           +S+ + WT   N+ FE A+++YDKDTPDRW  VA  + GKTV +V + +  L ED++ I
Sbjct: 5  SRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINI 64

Query: 74 EAGHVPIP 81
          E G VP+P
Sbjct: 65 ETGRVPLP 72


>AT4G39250.1 | Symbols: ATRL1, RSM2, RL1 | RAD-like 1 |
           chr4:18271457-18271857 REVERSE LENGTH=100
          Length = 100

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 6/92 (6%)

Query: 22  WTREDNEKFESAVSIYDKDTPDRWLKVAAMIPGKTVFDVIKKFKEL-EDILGIEAGHVPI 80
           WT + N+ FE A++ YD+DTP+RW  VA ++ GKT  +V + ++ L +DI  IE GHVP 
Sbjct: 14  WTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIENGHVPF 73

Query: 81  PATVRVRGPNHVRKKGVPWTEEEHRGFLMGLQ 112
           P      G  + R      ++EE R   M LQ
Sbjct: 74  PNYRTSGGCTNGR-----LSQEEKRMRNMRLQ 100


>AT3G10595.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr3:3311905-3312815 REVERSE LENGTH=183
          Length = 183

 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 5/131 (3%)

Query: 18  APTEWTREDNEKFESAVSIYDKDTPDRWLKVAAMIPGKTVFDVIKKFKEL-EDILGIEAG 76
           A   WT E+NE F+ A+ ++      R+  VA  +  ++V DV + +KEL  D+L + + 
Sbjct: 2   AENSWTTEENEMFKDALVMFTAFLLTRFESVAEYVD-RSVDDVKEHYKELVNDLLEMGSS 60

Query: 77  HVPIPATV-RVRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLTKTPTQV 135
            V  P  + +    +  + +   WT+E H  FL+GL ++G  DWR IA   +  K+P QV
Sbjct: 61  RVAFPNELTKDMAQSSYQAERTIWTKETHEWFLIGLDRFG-KDWRKIAV-LLDCKSPIQV 118

Query: 136 ASHARKYYKKQ 146
             +A  +Y+ Q
Sbjct: 119 EIYAENFYQWQ 129


>AT2G21650.1 | Symbols: MEE3, ATRL2, RSM1 | Homeodomain-like
          superfamily protein | chr2:9259654-9260419 FORWARD
          LENGTH=101
          Length = 101

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 1/61 (1%)

Query: 22 WTREDNEKFESAVSIYDKDTPDRWLKVAAMIPGKTVFDVIKKFKEL-EDILGIEAGHVPI 80
          WT + N+ FE A+++YD+DTPDRW  VA  + GKT  +  +++  L  DI  IE GHVP 
Sbjct: 14 WTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIESIENGHVPF 73

Query: 81 P 81
          P
Sbjct: 74 P 74


>AT3G10585.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr3:3308567-3309429 REVERSE LENGTH=165
          Length = 165

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 43/148 (29%)

Query: 22  WTREDNEKFESAVSIYDKDTPDRWLKVAAMIPG-----KTVFDVIKKFKELEDILGIEAG 76
           WTR+++++FE A+ I+ + +P     +A  +       K  +D I  +    D++ IE+G
Sbjct: 7   WTRDNDKRFELALVIFPEGSPYFLEYIAEFLQKPLEEVKYYYDAILVY----DVVLIESG 62

Query: 77  HVPIP------------ATVRVRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNIAR 124
              +P            AT    G  +   + +PWTEEEHR F+                
Sbjct: 63  KYALPKYPEAYYVSLTEATESKHGETNQIPRIIPWTEEEHREFV---------------- 106

Query: 125 NFVLTKTPTQVASHARKYYKKQKVSGDK 152
                 T TQVASHA+KY K+QK+   K
Sbjct: 107 ------TSTQVASHAQKYDKRQKLDSKK 128


>AT1G18330.2 | Symbols: EPR1, RVE7 | Homeodomain-like superfamily
           protein | chr1:6306196-6307718 REVERSE LENGTH=372
          Length = 372

 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 2/72 (2%)

Query: 80  IPATVRVRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLTKTPTQVASHA 139
           I   V+VR P  V K+   W+EEEH  FL  ++ YG G WR I +  + TKT  Q+ SHA
Sbjct: 60  IENVVKVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRG-WRQI-QEHIGTKTAVQIRSHA 117

Query: 140 RKYYKKQKVSGD 151
           +K++ K     D
Sbjct: 118 QKFFSKMAQEAD 129


>AT3G10113.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr3:3118043-3119391 REVERSE LENGTH=336
          Length = 336

 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 2/72 (2%)

Query: 80  IPATVRVRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLTKTPTQVASHA 139
           I   V+VR P  V K+   W+EEEH  FL  ++ YG G WR I +  + TKT  Q+ SHA
Sbjct: 49  IENVVKVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRG-WRQI-QEHIGTKTAVQIRSHA 106

Query: 140 RKYYKKQKVSGD 151
           +K++ K     D
Sbjct: 107 QKFFSKMAQEAD 118


>AT1G18330.1 | Symbols: EPR1, RVE7 | Homeodomain-like superfamily
           protein | chr1:6306196-6307640 REVERSE LENGTH=346
          Length = 346

 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 2/72 (2%)

Query: 80  IPATVRVRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLTKTPTQVASHA 139
           I   V+VR P  V K+   W+EEEH  FL  ++ YG G WR I +  + TKT  Q+ SHA
Sbjct: 34  IENVVKVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRG-WRQI-QEHIGTKTAVQIRSHA 91

Query: 140 RKYYKKQKVSGD 151
           +K++ K     D
Sbjct: 92  QKFFSKMAQEAD 103


>AT1G19510.1 | Symbols: ATRL5, RSM4, RL5 | RAD-like 5 |
          chr1:6756483-6757290 REVERSE LENGTH=100
          Length = 100

 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 27 NEKFESAVSIYDKDTPDRWLKVAAMIPGKTVFDVIKKFKEL-EDILGIEAGHVPIP 81
          N+ FE A+++YDKDTPDRW  VA  +  K+  +V + +  L ED++ IE   VP+P
Sbjct: 17 NKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQDLVPLP 72


>AT2G18328.1 | Symbols: ATRL4, RL4 | RAD-like 4 |
          chr2:7964478-7964711 FORWARD LENGTH=77
          Length = 77

 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 40/59 (67%), Gaps = 2/59 (3%)

Query: 24 REDNEKFESAVSIYDKDTPDRWLKVAAMIPGKTVFDVIKKFK-ELEDILGIEAGHVPIP 81
          RED ++FE A++ +DKDTPDRW K+A  + GK+  +V + ++  L D+  IE+G  P P
Sbjct: 14 RED-KQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDVNDIESGRYPQP 71


>AT3G09600.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr3:2946459-2948270 FORWARD LENGTH=298
          Length = 298

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)

Query: 85  RVRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLTKTPTQVASHARKYYK 144
           +VR P  + K    WTEEEH  FL  LQ +   DW+ I  +FV +KT  Q+ SHA+KY+ 
Sbjct: 32  KVRKPYTITKSRESWTEEEHDKFLEALQLFD-RDWKKI-EDFVGSKTVIQIRSHAQKYFL 89

Query: 145 KQKVSG 150
           K + +G
Sbjct: 90  KVQKNG 95


>AT3G09600.2 | Symbols:  | Homeodomain-like superfamily protein |
           chr3:2946459-2948200 FORWARD LENGTH=282
          Length = 282

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)

Query: 85  RVRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLTKTPTQVASHARKYYK 144
           +VR P  + K    WTEEEH  FL  LQ +   DW+ I  +FV +KT  Q+ SHA+KY+ 
Sbjct: 32  KVRKPYTITKSRESWTEEEHDKFLEALQLFD-RDWKKI-EDFVGSKTVIQIRSHAQKYFL 89

Query: 145 KQKVSG 150
           K + +G
Sbjct: 90  KVQKNG 95


>AT4G36570.1 | Symbols: ATRL3, RL3 | RAD-like 3 |
          chr4:17254660-17254836 FORWARD LENGTH=58
          Length = 58

 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 32/44 (72%)

Query: 22 WTREDNEKFESAVSIYDKDTPDRWLKVAAMIPGKTVFDVIKKFK 65
          WTR++N+ FE A++ YD+DTPDRW  VA  + GK+  +V + ++
Sbjct: 12 WTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYE 55


>AT1G01520.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr1:190596-192139 FORWARD LENGTH=287
          Length = 287

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 2/70 (2%)

Query: 83  TVRVRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLTKTPTQVASHARKY 142
           T +VR P  + K    WTE+EH  FL  L  +   DW+ I + FV +KT  Q+ SHA+KY
Sbjct: 48  TKKVRKPYTITKSRENWTEQEHDKFLEALHLFD-RDWKKI-KAFVGSKTVIQIRSHAQKY 105

Query: 143 YKKQKVSGDK 152
           + K + +G K
Sbjct: 106 FLKVQKNGTK 115


>AT4G01280.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr4:535288-536854 FORWARD LENGTH=302
          Length = 302

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 83  TVRVRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLTKTPTQVASHARKY 142
           T ++R P  ++K    WT++EH  FL  L  +   DW+ I   FV +KT  Q+ SHA+KY
Sbjct: 46  TTKIRKPYTIKKSRENWTDQEHDKFLEALHLFD-RDWKKI-EAFVGSKTVVQIRSHAQKY 103

Query: 143 YKKQKVSG 150
           + K + SG
Sbjct: 104 FLKVQKSG 111


>AT4G01280.2 | Symbols:  | Homeodomain-like superfamily protein |
           chr4:535288-536854 FORWARD LENGTH=303
          Length = 303

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 83  TVRVRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLTKTPTQVASHARKY 142
           T ++R P  ++K    WT++EH  FL  L  +   DW+ I   FV +KT  Q+ SHA+KY
Sbjct: 46  TTKIRKPYTIKKSRENWTDQEHDKFLEALHLFD-RDWKKI-EAFVGSKTVVQIRSHAQKY 103

Query: 143 YKKQKVSG 150
           + K + SG
Sbjct: 104 FLKVQKSG 111


>AT2G46830.1 | Symbols: CCA1 | circadian clock associated 1 |
           chr2:19246005-19248717 FORWARD LENGTH=608
          Length = 608

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 2/62 (3%)

Query: 84  VRVRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLTKTPTQVASHARKYY 143
           ++ R P  + K+   WTEEEH  F+  L+ YG   W+ I  + V TKT  Q+ SHA+K++
Sbjct: 12  IKTRKPYTITKQRERWTEEEHNRFIEALRLYGRA-WQKIEEH-VATKTAVQIRSHAQKFF 69

Query: 144 KK 145
            K
Sbjct: 70  SK 71


>AT5G52660.2 | Symbols:  | Homeodomain-like superfamily protein |
           chr5:21359423-21362037 REVERSE LENGTH=331
          Length = 331

 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 2/66 (3%)

Query: 85  RVRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLTKTPTQVASHARKYYK 144
           ++R P  + K    WTE EH  FL  LQ +   DW+ I   F+ +KT  Q+ SHA+KY+ 
Sbjct: 61  KIRKPYTITKSRESWTEPEHDKFLEALQLFD-RDWKKI-EAFIGSKTVIQIRSHAQKYFL 118

Query: 145 KQKVSG 150
           K + SG
Sbjct: 119 KVQKSG 124


>AT5G52660.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr5:21359423-21362037 REVERSE LENGTH=330
          Length = 330

 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 2/66 (3%)

Query: 85  RVRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLTKTPTQVASHARKYYK 144
           ++R P  + K    WTE EH  FL  LQ +   DW+ I   F+ +KT  Q+ SHA+KY+ 
Sbjct: 61  KIRKPYTITKSRESWTEPEHDKFLEALQLFD-RDWKKI-EAFIGSKTVIQIRSHAQKYFL 118

Query: 145 KQKVSG 150
           K + SG
Sbjct: 119 KVQKSG 124


>AT5G37260.1 | Symbols: RVE2, CIR1 | Homeodomain-like superfamily
           protein | chr5:14751344-14752972 REVERSE LENGTH=287
          Length = 287

 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)

Query: 84  VRVRGPNHVRKKGVPWTEEEHRGFLMGLQKYGIGDWRNIARNFVLTKTPTQVASHARKYY 143
           ++ R P  + K+   WTE EH  F+  L+ YG   WR I  + V TKT  Q+ SHA+K++
Sbjct: 24  LKTRKPYTITKQREKWTEAEHEKFVEALKLYGRA-WRRIEEH-VGTKTAVQIRSHAQKFF 81

Query: 144 KK 145
            K
Sbjct: 82  TK 83