Miyakogusa Predicted Gene

Lj1g3v4139540.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4139540.1 Non Chatacterized Hit- tr|I1JI56|I1JI56_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.30024
PE,73.68,0,Homeodomain-like,Homeodomain-like; myb_SHAQKYF: myb-like
DNA-binding domain, SHAQKYF ,Myb domain, pl,CUFF.31994.1
         (290 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G38090.1 | Symbols:  | Duplicated homeodomain-like superfamil...   269   1e-72
AT5G05790.1 | Symbols:  | Duplicated homeodomain-like superfamil...   247   8e-66
AT3G11280.2 | Symbols:  | Duplicated homeodomain-like superfamil...   244   5e-65
AT3G11280.1 | Symbols:  | Duplicated homeodomain-like superfamil...   244   5e-65
AT5G58900.1 | Symbols:  | Homeodomain-like transcriptional regul...   233   1e-61
AT5G01200.1 | Symbols:  | Duplicated homeodomain-like superfamil...   213   9e-56
AT5G08520.1 | Symbols:  | Duplicated homeodomain-like superfamil...   169   2e-42
AT1G49010.1 | Symbols:  | Duplicated homeodomain-like superfamil...   163   1e-40
AT5G04760.1 | Symbols:  | Duplicated homeodomain-like superfamil...   148   4e-36
AT5G23650.1 | Symbols:  | Homeodomain-like transcriptional regul...   147   7e-36
AT3G10580.2 | Symbols:  | Homeodomain-like superfamily protein |...   124   1e-28
AT3G10580.1 | Symbols:  | Homeodomain-like superfamily protein |...   123   1e-28
AT4G09450.1 | Symbols:  | Duplicated homeodomain-like superfamil...   114   6e-26
AT5G56840.1 | Symbols:  | myb-like transcription factor family p...   107   8e-24
AT5G47390.1 | Symbols:  | myb-like transcription factor family p...   106   2e-23
AT5G61620.1 | Symbols:  | myb-like transcription factor family p...   105   3e-23
AT3G16350.1 | Symbols:  | Homeodomain-like superfamily protein |...    98   5e-21
AT1G19000.2 | Symbols:  | Homeodomain-like superfamily protein |...    98   6e-21
AT1G19000.1 | Symbols:  | Homeodomain-like superfamily protein |...    98   6e-21
AT1G70000.2 | Symbols:  | myb-like transcription factor family p...    98   6e-21
AT1G70000.1 | Symbols:  | myb-like transcription factor family p...    98   6e-21
AT3G10590.1 | Symbols:  | Duplicated homeodomain-like superfamil...    97   1e-20
AT1G74840.1 | Symbols:  | Homeodomain-like superfamily protein |...    93   2e-19
AT1G74840.2 | Symbols:  | Homeodomain-like superfamily protein |...    93   3e-19
AT4G39250.1 | Symbols: ATRL1, RSM2, RL1 | RAD-like 1 | chr4:1827...    79   3e-15
AT1G75250.1 | Symbols: ATRL6, RSM3, RL6 | RAD-like 6 | chr1:2824...    78   6e-15
AT1G75250.2 | Symbols: ATRL6, RSM3, RL6 | RAD-like 6 | chr1:2824...    78   9e-15
AT2G21650.1 | Symbols: MEE3, ATRL2, RSM1 | Homeodomain-like supe...    75   5e-14
AT1G19510.1 | Symbols: ATRL5, RSM4, RL5 | RAD-like 5 | chr1:6756...    65   7e-11
AT3G10585.1 | Symbols:  | Homeodomain-like superfamily protein |...    65   7e-11
AT2G18328.1 | Symbols: ATRL4, RL4 | RAD-like 4 | chr2:7964478-79...    63   2e-10
AT3G10595.1 | Symbols:  | Duplicated homeodomain-like superfamil...    58   7e-09
AT4G36570.1 | Symbols: ATRL3, RL3 | RAD-like 3 | chr4:17254660-1...    57   1e-08
AT5G52660.2 | Symbols:  | Homeodomain-like superfamily protein |...    55   6e-08
AT5G52660.1 | Symbols:  | Homeodomain-like superfamily protein |...    55   6e-08
AT1G18330.1 | Symbols: EPR1, RVE7 | Homeodomain-like superfamily...    52   4e-07
AT1G18330.2 | Symbols: EPR1, RVE7 | Homeodomain-like superfamily...    52   5e-07
AT1G01520.1 | Symbols:  | Homeodomain-like superfamily protein |...    52   5e-07
AT3G10113.1 | Symbols:  | Homeodomain-like superfamily protein |...    52   6e-07
AT3G09600.2 | Symbols:  | Homeodomain-like superfamily protein |...    51   9e-07
AT3G09600.1 | Symbols:  | Homeodomain-like superfamily protein |...    51   9e-07
AT4G01280.2 | Symbols:  | Homeodomain-like superfamily protein |...    51   1e-06
AT4G01280.1 | Symbols:  | Homeodomain-like superfamily protein |...    51   1e-06
AT5G17300.1 | Symbols: RVE1 | Homeodomain-like superfamily prote...    50   2e-06
AT2G46830.1 | Symbols: CCA1 | circadian clock associated 1 | chr...    49   3e-06

>AT2G38090.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr2:15945278-15946775 FORWARD LENGTH=298
          Length = 298

 Score =  269 bits (688), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 147/295 (49%), Positives = 185/295 (62%), Gaps = 40/295 (13%)

Query: 3   LETLYSPCFMPNSNWFVQESAHSTEWSREDNKRFESALAIYDKDTPDRWLNVAAMIPGKT 62
           +E +    ++  SNW  QE+   T+W+ E+NK+FE+ALA YDKDTPDRW  VAAM+PGKT
Sbjct: 5   IEVMSPATYLETSNWLFQEN-RGTKWTAEENKKFENALAFYDKDTPDRWSRVAAMLPGKT 63

Query: 63  VLDVIKQYRELEEDVGEIEAGHVPVPGYHSSSFT-----FEVVENQN--------FDGLK 109
           V DVIKQYRELEEDV +IEAG +P+PGY S SFT     ++     N        F    
Sbjct: 64  VGDVIKQYRELEEDVSDIEAGLIPIPGYASDSFTLDWGGYDGASGNNGFNMNGYYFSAAG 123

Query: 110 RKPGTTLRGSDHERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHA 169
            K G+  R ++HERKKGVPWTEEEH++FLMGL KYGKGDWRNIARNFV T+TPTQVASHA
Sbjct: 124 GKRGSAARTAEHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHA 183

Query: 170 QKYYIRQKVSGGKDKRRPSIHDITTVNLTET------------------SITSENNKPLS 211
           QKY+IRQ V+GGKDKRR SIHDITTVN+ ++                  S+     +   
Sbjct: 184 QKYFIRQ-VNGGKDKRRSSIHDITTVNIPDSPDAAAADNATANAPCSPPSVGGNQRETSE 242

Query: 212 FKSTSNYNSGSLMVFNPNC--DDLLMMPSSSDIITSKTLKLQGQDLYDCSLHEAY 264
           ++  + Y+  +   +N N   + LL M S     T    KLQ Q   + S  E+Y
Sbjct: 243 WEGQTLYDETAAAFYNQNAFSETLLGMSS-----TPYMAKLQEQSFLNASQFESY 292


>AT5G05790.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr5:1740724-1741671 REVERSE LENGTH=277
          Length = 277

 Score =  247 bits (630), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 123/205 (60%), Positives = 154/205 (75%), Gaps = 6/205 (2%)

Query: 3   LETLYSPCFMPNSNWFVQE--SAHSTEWSREDNKRFESALAIYDKDTPDRWLNVAAMIPG 60
           L  L S     +  + VQE     S+ W++E+NK+FE ALA+Y  DTPDRW  VAAMIPG
Sbjct: 4   LHPLLSHVPTSDHRFVVQEMMCLQSSSWTKEENKKFERALAVYADDTPDRWFKVAAMIPG 63

Query: 61  KTVLDVIKQYRELEEDVGEIEAGHVPVPGYHSSSFTF--EVVENQNFDGLKRKPGTTLRG 118
           KT+ DV++QY +LEED+ +IEAG VP+PGY S +     +VV  ++FD  ++ P    RG
Sbjct: 64  KTISDVMRQYSKLEEDLFDIEAGLVPIPGYRSVTPCGFDQVVSPRDFDAYRKLPNGA-RG 122

Query: 119 SDHERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQKYYIRQKV 178
            D +R+KGVPWTEEEH+RFL+GLLKYGKGDWRNI+RNFV +KTPTQVASHAQKYY RQ +
Sbjct: 123 FDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQ-L 181

Query: 179 SGGKDKRRPSIHDITTVNLTETSIT 203
           SG KDKRRPSIHDITTVNL   +++
Sbjct: 182 SGAKDKRRPSIHDITTVNLLNANLS 206


>AT3G11280.2 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr3:3533477-3534393 REVERSE LENGTH=263
          Length = 263

 Score =  244 bits (623), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 128/208 (61%), Positives = 157/208 (75%), Gaps = 15/208 (7%)

Query: 3   LETLYSPCFMPNSN--WFVQE-----SAHSTEWSREDNKRFESALAIYDKDTPDRWLNVA 55
           +ETL+    +P S+  + VQE     S+ S  W++E+NK FE ALAIY +D+PDRW  VA
Sbjct: 1   METLHPFSHLPISDHRFVVQEMVSLHSSSSGSWTKEENKMFERALAIYAEDSPDRWFKVA 60

Query: 56  AMIPGKTVLDVIKQYRELEEDVGEIEAGHVPVPGYHSSSFTFEVVENQNFD-GLKRKPGT 114
           +MIPGKTV DV+KQY +LEEDV +IEAG VP+PGY ++S          FD  + RK  +
Sbjct: 61  SMIPGKTVFDVMKQYSKLEEDVFDIEAGRVPIPGYPAASSPL------GFDTDMCRKRPS 114

Query: 115 TLRGSDHERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQKYYI 174
             RGSD +RKKGVPWTEEEH+RFL+GLLKYGKGDWRNI+RNFV++KTPTQVASHAQKYY 
Sbjct: 115 GARGSDQDRKKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYYQ 174

Query: 175 RQKVSGGKDKRRPSIHDITTVNLTETSI 202
           RQ +SG KDKRRPSIHDITT NL   ++
Sbjct: 175 RQ-LSGAKDKRRPSIHDITTGNLLNANL 201


>AT3G11280.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr3:3533477-3534393 REVERSE LENGTH=263
          Length = 263

 Score =  244 bits (623), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 128/208 (61%), Positives = 157/208 (75%), Gaps = 15/208 (7%)

Query: 3   LETLYSPCFMPNSN--WFVQE-----SAHSTEWSREDNKRFESALAIYDKDTPDRWLNVA 55
           +ETL+    +P S+  + VQE     S+ S  W++E+NK FE ALAIY +D+PDRW  VA
Sbjct: 1   METLHPFSHLPISDHRFVVQEMVSLHSSSSGSWTKEENKMFERALAIYAEDSPDRWFKVA 60

Query: 56  AMIPGKTVLDVIKQYRELEEDVGEIEAGHVPVPGYHSSSFTFEVVENQNFD-GLKRKPGT 114
           +MIPGKTV DV+KQY +LEEDV +IEAG VP+PGY ++S          FD  + RK  +
Sbjct: 61  SMIPGKTVFDVMKQYSKLEEDVFDIEAGRVPIPGYPAASSPL------GFDTDMCRKRPS 114

Query: 115 TLRGSDHERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQKYYI 174
             RGSD +RKKGVPWTEEEH+RFL+GLLKYGKGDWRNI+RNFV++KTPTQVASHAQKYY 
Sbjct: 115 GARGSDQDRKKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYYQ 174

Query: 175 RQKVSGGKDKRRPSIHDITTVNLTETSI 202
           RQ +SG KDKRRPSIHDITT NL   ++
Sbjct: 175 RQ-LSGAKDKRRPSIHDITTGNLLNANL 201


>AT5G58900.1 | Symbols:  | Homeodomain-like transcriptional
           regulator | chr5:23783275-23784667 REVERSE LENGTH=288
          Length = 288

 Score =  233 bits (593), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 126/218 (57%), Positives = 150/218 (68%), Gaps = 21/218 (9%)

Query: 8   SPCFMPNSNWFVQE-------SAHSTEWSREDNKRFESALAIYDKDTPDRWLNVAAMIPG 60
           S   +   NW ++E       S     W+  +NK FE+ALA+YD +TPDRW  VAA+IPG
Sbjct: 7   STSHVSGGNWLMEETKSGVAASGEGATWTAAENKAFENALAVYDDNTPDRWQKVAAVIPG 66

Query: 61  KTVLDVIKQYRELEEDVGEIEAGHVPVPGYHSSS-FTFE-VVENQNFDGLKRKPGTTL-- 116
           KTV DVI+QY +LE DV  IEAG +PVPGY +S  FT +        +G K  PG  +  
Sbjct: 67  KTVSDVIRQYNDLEADVSSIEAGLIPVPGYITSPPFTLDWAGGGGGCNGFK--PGHQVCN 124

Query: 117 ------RGSDHERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQ 170
                 R  + ERKKGVPWTEEEHK FLMGL KYGKGDWRNI+RNFV+T+TPTQVASHAQ
Sbjct: 125 KRSQAGRSPELERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQ 184

Query: 171 KYYIRQKVSGGKDKRRPSIHDITTVNLTETSITSENNK 208
           KY+IRQ +SGGKDKRR SIHDITTVNL E + + E NK
Sbjct: 185 KYFIRQ-LSGGKDKRRASIHDITTVNLEEEA-SLETNK 220


>AT5G01200.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr5:77116-78294 FORWARD LENGTH=267
          Length = 267

 Score =  213 bits (543), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 116/209 (55%), Positives = 148/209 (70%), Gaps = 22/209 (10%)

Query: 6   LYSPCFMPNSNWFVQESAHSTEWSREDNKRFESALA-IYDKDTPDRWLNVAAMIPGKTVL 64
           ++SP    N+NW  QE   +T W+ E+NKRFE ALA + DKD  + W  +A +IPGKTV 
Sbjct: 12  MFSPA---NTNWIFQEVREAT-WTAEENKRFEKALAYLDDKDNLESWSKIADLIPGKTVA 67

Query: 65  DVIKQYRELEEDVGEIEAGHVPVPGY------HSSSFTFEVVENQNFD------GLKRKP 112
           DVIK+Y+ELE+DV +IEAG +P+PGY       ++S  F  +EN ++       G +  P
Sbjct: 68  DVIKRYKELEDDVSDIEAGLIPIPGYGGDASSAANSDYFFGLENSSYGYDYVVGGKRSSP 127

Query: 113 GTT--LRGS--DHERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASH 168
             T   R    + ERKKGVPWTE+EH RFLMGL KYGKGDWRNIA++FV T+TPTQVASH
Sbjct: 128 AMTDCFRSPMPEKERKKGVPWTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASH 187

Query: 169 AQKYYIRQKVSGGKDKRRPSIHDITTVNL 197
           AQKY++RQ ++ GKDKRR SIHDITTVN+
Sbjct: 188 AQKYFLRQ-LTDGKDKRRSSIHDITTVNI 215


>AT5G08520.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr5:2755470-2757741 REVERSE LENGTH=298
          Length = 298

 Score =  169 bits (429), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 92/192 (47%), Positives = 124/192 (64%), Gaps = 12/192 (6%)

Query: 19  VQESAHSTEWSREDNKRFESALAIYDKDTPDRWLNVAAMIPGKTVLDVIKQYRELEEDVG 78
           V+E +  + WSRED+  FE ALA    ++ +RW  +AA +PGK+V  + + Y  L EDV 
Sbjct: 3   VEEVSDGSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVEDVT 62

Query: 79  EIEAGHVPVPGYHSSSFTFEVVENQNFDGLKRKPGTTLRG---------SDHERKKGVPW 129
            IE+G VP+P Y S   +     ++      +K G +  G         SD ER+KG+ W
Sbjct: 63  RIESGCVPLPAYGSPEGSNGHAGDEGAS--SKKGGNSHAGESNQAGKSKSDQERRKGIAW 120

Query: 130 TEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQKYYIRQKVSGGKDKRRPSI 189
           TE+EH+ FL+GL KYGKGDWR+I+RNFV+T+TPTQVASHAQKY+IR   S  KD+RR SI
Sbjct: 121 TEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLN-SMNKDRRRSSI 179

Query: 190 HDITTVNLTETS 201
           HDIT+V   + S
Sbjct: 180 HDITSVGNADVS 191


>AT1G49010.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr1:18132714-18133778 FORWARD LENGTH=314
          Length = 314

 Score =  163 bits (412), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/213 (43%), Positives = 133/213 (62%), Gaps = 28/213 (13%)

Query: 28  WSREDNKRFESALAIY---DKDTPDRWLNVAAMIPGKTVLDVIKQYRELEEDVGEIEAGH 84
           WSRE+ K FE+A+A++   ++ T D+W  +++M+P K + +V K Y+ L EDV  IE G 
Sbjct: 8   WSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLEDVKAIENGQ 67

Query: 85  VPVPGYH----------SSSFTFEVVENQNFDGL-KRKPGTTLRG-------------SD 120
           VP+P YH          +++ T     + +  G  ++KP     G             ++
Sbjct: 68  VPLPRYHHRKGLIVDEAAAAATSPANRDSHSSGSSEKKPNPGTSGISSSNGGRSGGSRAE 127

Query: 121 HERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQKYYIRQKVSG 180
            ER+KG+PWTEEEH+ FL+GL K+GKGDWR+I+RNFV+++TPTQVASHAQKY+IR   S 
Sbjct: 128 QERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLN-SM 186

Query: 181 GKDKRRPSIHDITTVNLTETSITSENNKPLSFK 213
            +D+RR SIHDITTVN    ++T    +P   K
Sbjct: 187 NRDRRRSSIHDITTVNNQAPAVTGGGQQPQVVK 219


>AT5G04760.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr5:1373752-1374529 REVERSE LENGTH=215
          Length = 215

 Score =  148 bits (374), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 82/177 (46%), Positives = 115/177 (64%), Gaps = 13/177 (7%)

Query: 25  STEWSREDNKRFESALAIYDKDTPDRWLNVAAMIPGKTVLDVIKQYRELEEDVGEIEAGH 84
           S++W+R ++K FE AL ++ + +P+RW  +A  +  K+  +V + Y  L  DV EI++G 
Sbjct: 3   SSQWTRSEDKMFEQALVLFPEGSPNRWERIADQLH-KSAGEVREHYEVLVHDVFEIDSGR 61

Query: 85  VPVPGYHSSSFTFEVVENQNFDGLKRKPGTTLRGSDH---ERKKGVPWTEEEHKRFLMGL 141
           V VP Y        + ++          G    GS H   ERK+G PWTE EHK FL+GL
Sbjct: 62  VDVPDY--------MDDSAAAAAGWDSAGQISFGSKHGESERKRGTPWTENEHKLFLIGL 113

Query: 142 LKYGKGDWRNIARNFVMTKTPTQVASHAQKYYIRQKVSGGKDKRRPSIHDITTVNLT 198
            +YGKGDWR+I+RN V+T+TPTQVASHAQKY++RQ  S  K+++R SIHDITTV+ T
Sbjct: 114 KRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQN-SVKKERKRSSIHDITTVDAT 169


>AT5G23650.1 | Symbols:  | Homeodomain-like transcriptional
           regulator | chr5:7969812-7971019 FORWARD LENGTH=337
          Length = 337

 Score =  147 bits (372), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 84/212 (39%), Positives = 123/212 (58%), Gaps = 24/212 (11%)

Query: 20  QESAHSTEWSREDNKRFESALAIYDKDTPDRWLNVAAMIPGKTVLDVIKQYRELEEDVGE 79
           QE +  + WS++D+  FE ALAIY+  T  RW  +A ++PGKT+  VI+ Y  L  DV  
Sbjct: 5   QEISVGSSWSKDDDIAFEKALAIYNDKTEIRWKKIATVVPGKTLEQVIEHYNILARDVML 64

Query: 80  IEAGHVPVPGYHSSSFTFEVVENQNFDGLKRKPGTTLRGSD--------------HERKK 125
           IE+G V +P Y       + +E  N +   ++      G+D               +R++
Sbjct: 65  IESGCVRLPDYD------DFLEEPNHNAFGKERSILEGGNDRKYESKHKGKSKLKQKRRR 118

Query: 126 GVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQKYYIRQKVSGGKDKR 185
           GVPW   EH++FL GL KYGKGDWR+I+R+ V+T+T TQVASHAQKY+     S  K ++
Sbjct: 119 GVPWKPFEHRQFLHGLKKYGKGDWRSISRHCVVTRTSTQVASHAQKYFAHIN-SEDKKRK 177

Query: 186 RPSIHDITTVNLTETSITSENNKPLSFKSTSN 217
           RPSIHDIT   + E    S   +P++++  +N
Sbjct: 178 RPSIHDIT---IAENKSISTKQRPITWQKINN 206


>AT3G10580.2 | Symbols:  | Homeodomain-like superfamily protein |
           chr3:3307083-3308230 REVERSE LENGTH=256
          Length = 256

 Score =  124 bits (310), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 104/180 (57%), Gaps = 17/180 (9%)

Query: 28  WSREDNKRFESALAIYDKD-TPDRWLNVAAMIPGKTVLDVIKQYRELEEDVGEIEAGHVP 86
           W R+D+KRFE AL  +  + +PD   N+A  +  K + +V   Y+ L +DV  IE+G  P
Sbjct: 8   WKRDDDKRFELALVRFPAEGSPDFLENIAQFL-QKPLKEVYSYYQALVDDVTLIESGKYP 66

Query: 87  VPGYHSSSFTFEVVENQNFDGLKRKPGTTLRGSDHERKKGVPWTEEEHKRFLMGLLKYGK 146
           +P Y    +            L     +  +G+   +KKG+PW+ EEH+ FL GL KYGK
Sbjct: 67  LPKYPEDDYV----------SLPEATKSKTQGTG--KKKGIPWSPEEHRLFLDGLNKYGK 114

Query: 147 GDWRNIARNFVMTKTPTQVASHAQKYYIRQKVSGGKDKRRPSIHDITTVNLTETSITSEN 206
           GDW++I+R  V +++P QVASHAQKY++RQK   GK   R SIHD+T  +    ++   N
Sbjct: 115 GDWKSISRECVTSRSPMQVASHAQKYFLRQKNKKGK---RFSIHDMTLGDAENVTVPVSN 171


>AT3G10580.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr3:3307083-3308230 REVERSE LENGTH=287
          Length = 287

 Score =  123 bits (309), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 104/180 (57%), Gaps = 17/180 (9%)

Query: 28  WSREDNKRFESALAIYDKD-TPDRWLNVAAMIPGKTVLDVIKQYRELEEDVGEIEAGHVP 86
           W R+D+KRFE AL  +  + +PD   N+A  +  K + +V   Y+ L +DV  IE+G  P
Sbjct: 8   WKRDDDKRFELALVRFPAEGSPDFLENIAQFL-QKPLKEVYSYYQALVDDVTLIESGKYP 66

Query: 87  VPGYHSSSFTFEVVENQNFDGLKRKPGTTLRGSDHERKKGVPWTEEEHKRFLMGLLKYGK 146
           +P Y    +            L     +  +G+   +KKG+PW+ EEH+ FL GL KYGK
Sbjct: 67  LPKYPEDDYV----------SLPEATKSKTQGTG--KKKGIPWSPEEHRLFLDGLNKYGK 114

Query: 147 GDWRNIARNFVMTKTPTQVASHAQKYYIRQKVSGGKDKRRPSIHDITTVNLTETSITSEN 206
           GDW++I+R  V +++P QVASHAQKY++RQK   GK   R SIHD+T  +    ++   N
Sbjct: 115 GDWKSISRECVTSRSPMQVASHAQKYFLRQKNKKGK---RFSIHDMTLGDAENVTVPVSN 171


>AT4G09450.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr4:5983277-5984500 FORWARD LENGTH=200
          Length = 200

 Score =  114 bits (286), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 105/186 (56%), Gaps = 19/186 (10%)

Query: 27  EWSREDNKRFESALAIYDKDTPDRWLNVAAMIPGKTVLDVIKQYRELEEDVGEIEAGHVP 86
           +W+R D+KRFE AL    + +P+   N+A  +  K V +V   Y  L  D+  IE+G   
Sbjct: 6   QWTRVDDKRFELALLQIPEGSPNFIENIAYYLQ-KPVKEVEYYYCALVHDIERIESGKYV 64

Query: 87  VPGYHSSSFTFEVVENQNFDGLKRKPGTTLRGSDHERKKGVPWTEEEHKRFLMGLLKYGK 146
           +P Y               D +K       +G+   +K G+PW+EEE + FL GL K+GK
Sbjct: 65  LPKYPED------------DYVKLTEAGESKGNG--KKTGIPWSEEEQRLFLEGLNKFGK 110

Query: 147 GDWRNIARNFVMTKTPTQVASHAQKYYIRQKVSGGKDKRRPSIHDIT---TVNLTETSIT 203
           GDW+NI+R  V ++T TQVASHAQKY+ RQK     + +RPSIHD+T    VN+  +++ 
Sbjct: 111 GDWKNISRYCVKSRTSTQVASHAQKYFARQKQE-STNTKRPSIHDMTLGVAVNVPGSNLE 169

Query: 204 SENNKP 209
           S   +P
Sbjct: 170 STGQQP 175


>AT5G56840.1 | Symbols:  | myb-like transcription factor family
           protein | chr5:22980789-22982152 FORWARD LENGTH=233
          Length = 233

 Score =  107 bits (268), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 50/83 (60%), Positives = 64/83 (77%), Gaps = 1/83 (1%)

Query: 122 ERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQKYYIRQKVSGG 181
           +RKKGVPWT EEH+ FL+GL K GKGDWR I+RNFV+TK+PTQVASHAQKY++RQ  +  
Sbjct: 86  DRKKGVPWTAEEHRTFLIGLEKLGKGDWRGISRNFVVTKSPTQVASHAQKYFLRQTTTLH 145

Query: 182 KDKRRPSIHDITTV-NLTETSIT 203
             +RR S+ D+ +  N+ E S T
Sbjct: 146 HKRRRTSLFDMVSAGNVEENSTT 168


>AT5G47390.1 | Symbols:  | myb-like transcription factor family
           protein | chr5:19227001-19228546 FORWARD LENGTH=365
          Length = 365

 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 49/74 (66%), Positives = 59/74 (79%), Gaps = 1/74 (1%)

Query: 119 SDHERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQKYYIRQKV 178
           S  ERKKG PWTEEEH+ FL+GL K GKGDWR I+RN+V T+TPTQVASHAQKY+IRQ  
Sbjct: 88  SSRERKKGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQS- 146

Query: 179 SGGKDKRRPSIHDI 192
           +  + KRR S+ D+
Sbjct: 147 NVSRRKRRSSLFDM 160


>AT5G61620.1 | Symbols:  | myb-like transcription factor family
           protein | chr5:24772383-24773507 FORWARD LENGTH=317
          Length = 317

 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 52/86 (60%), Positives = 65/86 (75%), Gaps = 1/86 (1%)

Query: 121 HERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQKYYIRQKVSG 180
           HE+KKG PWTEEEH+ FL+GL K GKGDWR IA++FV T+TPTQVASHAQKY+IR  V+ 
Sbjct: 102 HEKKKGKPWTEEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIRLNVN- 160

Query: 181 GKDKRRPSIHDITTVNLTETSITSEN 206
            K KRR S+ DI+  +  E    S++
Sbjct: 161 DKRKRRASLFDISLEDQKEKERNSQD 186


>AT3G16350.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr3:5547828-5549397 FORWARD LENGTH=387
          Length = 387

 Score = 98.2 bits (243), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 43/60 (71%), Positives = 51/60 (85%), Gaps = 3/60 (5%)

Query: 118 GSDH---ERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQKYYI 174
           GS H   ERK+GVPWTEEEH+ FL+GL K GKGDWR I+RN+V ++TPTQVASHAQKY+I
Sbjct: 125 GSSHRRGERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVASHAQKYFI 184


>AT1G19000.2 | Symbols:  | Homeodomain-like superfamily protein |
           chr1:6561335-6562684 REVERSE LENGTH=285
          Length = 285

 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 77/116 (66%), Gaps = 9/116 (7%)

Query: 116 LRGSDHERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQKYYIR 175
           +  S   RK+GVPWTE EHKRFL+GL K GKGDW+ I+RNFV ++TPTQVASHAQKY++R
Sbjct: 91  ISSSSGGRKRGVPWTENEHKRFLIGLQKVGKGDWKGISRNFVKSRTPTQVASHAQKYFLR 150

Query: 176 QKVSGGKDKRRPSIHDITTVNLTETSIT---SENNKPLSFKSTSNYNSG--SLMVF 226
           +     + +R     DITT  +TE ++    ++ N PL     +N +SG  ++ VF
Sbjct: 151 RTNLNRRRRRSSLF-DITTETVTEMAMEQDPTQENSPL---PETNISSGQQAMQVF 202


>AT1G19000.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr1:6561335-6562684 REVERSE LENGTH=285
          Length = 285

 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 77/116 (66%), Gaps = 9/116 (7%)

Query: 116 LRGSDHERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQKYYIR 175
           +  S   RK+GVPWTE EHKRFL+GL K GKGDW+ I+RNFV ++TPTQVASHAQKY++R
Sbjct: 91  ISSSSGGRKRGVPWTENEHKRFLIGLQKVGKGDWKGISRNFVKSRTPTQVASHAQKYFLR 150

Query: 176 QKVSGGKDKRRPSIHDITTVNLTETSIT---SENNKPLSFKSTSNYNSG--SLMVF 226
           +     + +R     DITT  +TE ++    ++ N PL     +N +SG  ++ VF
Sbjct: 151 RTNLNRRRRRSSLF-DITTETVTEMAMEQDPTQENSPL---PETNISSGQQAMQVF 202


>AT1G70000.2 | Symbols:  | myb-like transcription factor family
           protein | chr1:26363674-26364635 REVERSE LENGTH=261
          Length = 261

 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 41/57 (71%), Positives = 48/57 (84%)

Query: 118 GSDHERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQKYYI 174
           G + ERK+G PWTEEEH+ FL GL K GKGDWR I+RNFV T+TPTQVASHAQKY++
Sbjct: 89  GRNRERKRGTPWTEEEHRLFLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFL 145


>AT1G70000.1 | Symbols:  | myb-like transcription factor family
           protein | chr1:26363674-26364635 REVERSE LENGTH=261
          Length = 261

 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 41/57 (71%), Positives = 48/57 (84%)

Query: 118 GSDHERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQKYYI 174
           G + ERK+G PWTEEEH+ FL GL K GKGDWR I+RNFV T+TPTQVASHAQKY++
Sbjct: 89  GRNRERKRGTPWTEEEHRLFLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFL 145


>AT3G10590.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr3:3310424-3311311 REVERSE LENGTH=206
          Length = 206

 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/200 (38%), Positives = 103/200 (51%), Gaps = 24/200 (12%)

Query: 23  AHSTEWSREDNKRFESALAIYDKDTPDRWLNVAAMIPGKTVLDVIKQYRELEEDVGEIEA 82
           A S  W+ +DN+RF+SAL+ +  D   R +NVA  +P K + +V   Y +L  DV     
Sbjct: 2   ASSPRWTEDDNRRFKSALSQFPPDN-KRLVNVAQHLP-KPLEEVKYYYEKLVNDV----- 54

Query: 83  GHVPVPGYHSSSFTFEVVENQNFDGLKRKPGTTLR-----------GSDHERKKGVP--W 129
            ++P P  + +    + +E +    +  K    +                 RKK  P  W
Sbjct: 55  -YLPKPLENVTQHLQKPMEMEEMKYMYEKMANDVNQMPEYVPLAESSQSKRRKKDTPNPW 113

Query: 130 TEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQKYYIRQKVSGGKDKRRPSI 189
           TEEEH+ FL GL KYG+G     + NFV TKTP QV+SHAQ YY RQK    K+KRR SI
Sbjct: 114 TEEEHRLFLQGLKKYGEGASTLTSTNFVKTKTPRQVSSHAQ-YYKRQKSDNKKEKRR-SI 171

Query: 190 HDITTVNLTETSITSENNKP 209
            DI T+  TE +  S N  P
Sbjct: 172 FDI-TLESTEGNPDSGNQNP 190


>AT1G74840.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr1:28116201-28117317 REVERSE LENGTH=265
          Length = 265

 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 39/52 (75%), Positives = 46/52 (88%)

Query: 122 ERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQKYY 173
           ERK+GVPWTEEEHK FL+GL + GKGDW+ I+RNFV T+T TQVASHAQKY+
Sbjct: 91  ERKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQKYF 142


>AT1G74840.2 | Symbols:  | Homeodomain-like superfamily protein |
           chr1:28116201-28117317 REVERSE LENGTH=239
          Length = 239

 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 39/52 (75%), Positives = 46/52 (88%)

Query: 122 ERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQKYY 173
           ERK+GVPWTEEEHK FL+GL + GKGDW+ I+RNFV T+T TQVASHAQKY+
Sbjct: 91  ERKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQKYF 142


>AT4G39250.1 | Symbols: ATRL1, RSM2, RL1 | RAD-like 1 |
          chr4:18271457-18271857 REVERSE LENGTH=100
          Length = 100

 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 45/67 (67%)

Query: 28 WSREDNKRFESALAIYDKDTPDRWLNVAAMIPGKTVLDVIKQYRELEEDVGEIEAGHVPV 87
          W+ + NK FE ALA YD+DTP+RW NVA ++ GKT  +V + Y  L +D+  IE GHVP 
Sbjct: 14 WTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIENGHVPF 73

Query: 88 PGYHSSS 94
          P Y +S 
Sbjct: 74 PNYRTSG 80


>AT1G75250.1 | Symbols: ATRL6, RSM3, RL6 | RAD-like 6 |
          chr1:28245073-28245453 REVERSE LENGTH=126
          Length = 126

 Score = 78.2 bits (191), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 36/63 (57%), Positives = 43/63 (68%)

Query: 28 WSREDNKRFESALAIYDKDTPDRWLNVAAMIPGKTVLDVIKQYRELEEDVGEIEAGHVPV 87
          W+   NK FE ALA+YDKDTPDRW NVA  + GKTV +V + Y  L ED+  IE G VP+
Sbjct: 12 WTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRVPL 71

Query: 88 PGY 90
          P Y
Sbjct: 72 PNY 74


>AT1G75250.2 | Symbols: ATRL6, RSM3, RL6 | RAD-like 6 |
          chr1:28244463-28245453 REVERSE LENGTH=97
          Length = 97

 Score = 77.8 bits (190), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 39/71 (54%), Positives = 46/71 (64%), Gaps = 4/71 (5%)

Query: 28 WSREDNKRFESALAIYDKDTPDRWLNVAAMIPGKTVLDVIKQYRELEEDVGEIEAGHVPV 87
          W+   NK FE ALA+YDKDTPDRW NVA  + GKTV +V + Y  L ED+  IE G VP+
Sbjct: 12 WTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRVPL 71

Query: 88 PGYHSSSFTFE 98
          P Y     TFE
Sbjct: 72 PNYK----TFE 78


>AT2G21650.1 | Symbols: MEE3, ATRL2, RSM1 | Homeodomain-like
          superfamily protein | chr2:9259654-9260419 FORWARD
          LENGTH=101
          Length = 101

 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 45/67 (67%)

Query: 28 WSREDNKRFESALAIYDKDTPDRWLNVAAMIPGKTVLDVIKQYRELEEDVGEIEAGHVPV 87
          W+ + NK FE ALA+YD+DTPDRW NVA  + GKT  +  +QY  L  D+  IE GHVP 
Sbjct: 14 WTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIESIENGHVPF 73

Query: 88 PGYHSSS 94
          P Y +++
Sbjct: 74 PDYKTTT 80


>AT1G19510.1 | Symbols: ATRL5, RSM4, RL5 | RAD-like 5 |
          chr1:6756483-6757290 REVERSE LENGTH=100
          Length = 100

 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 33 NKRFESALAIYDKDTPDRWLNVAAMIPGKTVLDVIKQYRELEEDVGEIEAGHVPVPGYHS 92
          NK FE ALA+YDKDTPDRW NVA  +  K+  +V + Y  L ED+  IE   VP+P Y +
Sbjct: 17 NKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQDLVPLPKYKT 76


>AT3G10585.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr3:3308567-3309429 REVERSE LENGTH=165
          Length = 165

 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 42/170 (24%)

Query: 28  WSREDNKRFESALAIYDKDTPDRWLNVAAMIPGKTVLDVIKQYRE--LEEDVGEIEAGHV 85
           W+R+++KRFE AL I+ + +P     +A  +  +  L+ +K Y +  L  DV  IE+G  
Sbjct: 7   WTRDNDKRFELALVIFPEGSPYFLEYIAEFL--QKPLEEVKYYYDAILVYDVVLIESGKY 64

Query: 86  PVPGYHSSSFT--FEVVENQNFDGLKRKPGTTLRGSDHERKKGVPWTEEEHKRFLMGLLK 143
            +P Y  + +    E  E+++             G  ++  + +PWTEEEH+ F+     
Sbjct: 65  ALPKYPEAYYVSLTEATESKH-------------GETNQIPRIIPWTEEEHREFV----- 106

Query: 144 YGKGDWRNIARNFVMTKTPTQVASHAQKYYIRQKVSGGKDKRRPSIHDIT 193
                            T TQVASHAQKY  RQK+   K ++R S+ DIT
Sbjct: 107 -----------------TSTQVASHAQKYDKRQKLDSKK-RKRWSVLDIT 138


>AT2G18328.1 | Symbols: ATRL4, RL4 | RAD-like 4 |
          chr2:7964478-7964711 FORWARD LENGTH=77
          Length = 77

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 1/65 (1%)

Query: 30 REDNKRFESALAIYDKDTPDRWLNVAAMIPGKTVLDVIKQYRELEEDVGEIEAGHVPVPG 89
          RED K+FE ALA +DKDTPDRW  +A  + GK+  +V + Y  L  DV +IE+G  P P 
Sbjct: 14 RED-KQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDVNDIESGRYPQPR 72

Query: 90 YHSSS 94
          Y +++
Sbjct: 73 YRNTN 77


>AT3G10595.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr3:3311905-3312815 REVERSE LENGTH=183
          Length = 183

 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 25/149 (16%)

Query: 28  WSREDNKRFESALAIYDKDTPDRWLNVAAMIPGKTVLDVIKQYRELEEDVGEIEAGHVPV 87
           W+ E+N+ F+ AL ++      R+ +VA  +  ++V DV + Y+EL  D+ E+ +  V  
Sbjct: 6   WTTEENEMFKDALVMFTAFLLTRFESVAEYVD-RSVDDVKEHYKELVNDLLEMGSSRVAF 64

Query: 88  PGYHSSSFTFEVVENQNFDGLKRKPGTTLRGSDHERKKGVPWTEEEHKRFLMGLLKYGKG 147
           P         E+ ++             +  S ++ ++ + WT+E H+ FL+GL ++GK 
Sbjct: 65  PN--------ELTKD-------------MAQSSYQAERTI-WTKETHEWFLIGLDRFGK- 101

Query: 148 DWRNIARNFVMTKTPTQVASHAQKYYIRQ 176
           DWR IA   +  K+P QV  +A+ +Y  Q
Sbjct: 102 DWRKIAV-LLDCKSPIQVEIYAENFYQWQ 129


>AT4G36570.1 | Symbols: ATRL3, RL3 | RAD-like 3 |
          chr4:17254660-17254836 FORWARD LENGTH=58
          Length = 58

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/43 (55%), Positives = 32/43 (74%)

Query: 28 WSREDNKRFESALAIYDKDTPDRWLNVAAMIPGKTVLDVIKQY 70
          W+R++NK FE ALA YD+DTPDRW NVA  + GK+  +V + Y
Sbjct: 12 WTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHY 54


>AT5G52660.2 | Symbols:  | Homeodomain-like superfamily protein |
           chr5:21359423-21362037 REVERSE LENGTH=331
          Length = 331

 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 13/113 (11%)

Query: 129 WTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQKYYIRQKVSGGKD----- 183
           WTE EH +FL  L  + + DW+ I   F+ +KT  Q+ SHAQKY+++ + SG  +     
Sbjct: 75  WTEPEHDKFLEALQLFDR-DWKKI-EAFIGSKTVIQIRSHAQKYFLKVQKSGTGEHLPPP 132

Query: 184 -KRRPSIHDITTVNLTETSITSENNKPLSFKSTSNYNSGSLMVFNPNCDDLLM 235
             +R + H           +      P SFKSTS  N  S M F P    +LM
Sbjct: 133 RPKRKAAHPYPQKAHKNVQL----QVPGSFKSTSEPNDPSFM-FRPESSSMLM 180


>AT5G52660.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr5:21359423-21362037 REVERSE LENGTH=330
          Length = 330

 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 13/113 (11%)

Query: 129 WTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQKYYIRQKVSGGKD----- 183
           WTE EH +FL  L  + + DW+ I   F+ +KT  Q+ SHAQKY+++ + SG  +     
Sbjct: 75  WTEPEHDKFLEALQLFDR-DWKKI-EAFIGSKTVIQIRSHAQKYFLKVQKSGTGEHLPPP 132

Query: 184 -KRRPSIHDITTVNLTETSITSENNKPLSFKSTSNYNSGSLMVFNPNCDDLLM 235
             +R + H           +      P SFKSTS  N  S M F P    +LM
Sbjct: 133 RPKRKAAHPYPQKAHKNVQL----QVPGSFKSTSEPNDPSFM-FRPESSSMLM 180


>AT1G18330.1 | Symbols: EPR1, RVE7 | Homeodomain-like superfamily
           protein | chr1:6306196-6307640 REVERSE LENGTH=346
          Length = 346

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 9/64 (14%)

Query: 110 RKPGTTLRGSDHERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHA 169
           RKP T  +    +R+K   W+EEEH RFL  +  YG+G WR I +  + TKT  Q+ SHA
Sbjct: 41  RKPYTVTK----QREK---WSEEEHDRFLEAIKLYGRG-WRQI-QEHIGTKTAVQIRSHA 91

Query: 170 QKYY 173
           QK++
Sbjct: 92  QKFF 95


>AT1G18330.2 | Symbols: EPR1, RVE7 | Homeodomain-like superfamily
           protein | chr1:6306196-6307718 REVERSE LENGTH=372
          Length = 372

 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 9/64 (14%)

Query: 110 RKPGTTLRGSDHERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHA 169
           RKP T  +    +R+K   W+EEEH RFL  +  YG+G WR I +  + TKT  Q+ SHA
Sbjct: 67  RKPYTVTK----QREK---WSEEEHDRFLEAIKLYGRG-WRQI-QEHIGTKTAVQIRSHA 117

Query: 170 QKYY 173
           QK++
Sbjct: 118 QKFF 121


>AT1G01520.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr1:190596-192139 FORWARD LENGTH=287
          Length = 287

 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 9/78 (11%)

Query: 110 RKPGTTLRGSDHERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHA 169
           RKP T  +  ++       WTE+EH +FL  L  + + DW+ I + FV +KT  Q+ SHA
Sbjct: 52  RKPYTITKSREN-------WTEQEHDKFLEALHLFDR-DWKKI-KAFVGSKTVIQIRSHA 102

Query: 170 QKYYIRQKVSGGKDKRRP 187
           QKY+++ + +G K+   P
Sbjct: 103 QKYFLKVQKNGTKEHLPP 120


>AT3G10113.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr3:3118043-3119391 REVERSE LENGTH=336
          Length = 336

 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 9/64 (14%)

Query: 110 RKPGTTLRGSDHERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHA 169
           RKP T  +    +R+K   W+EEEH RFL  +  YG+G WR I +  + TKT  Q+ SHA
Sbjct: 56  RKPYTVTK----QREK---WSEEEHDRFLEAIKLYGRG-WRQI-QEHIGTKTAVQIRSHA 106

Query: 170 QKYY 173
           QK++
Sbjct: 107 QKFF 110


>AT3G09600.2 | Symbols:  | Homeodomain-like superfamily protein |
           chr3:2946459-2948200 FORWARD LENGTH=282
          Length = 282

 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 129 WTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQKYYIRQKVSG 180
           WTEEEH +FL  L  + + DW+ I  +FV +KT  Q+ SHAQKY+++ + +G
Sbjct: 46  WTEEEHDKFLEALQLFDR-DWKKI-EDFVGSKTVIQIRSHAQKYFLKVQKNG 95


>AT3G09600.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr3:2946459-2948270 FORWARD LENGTH=298
          Length = 298

 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 129 WTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQKYYIRQKVSG 180
           WTEEEH +FL  L  + + DW+ I  +FV +KT  Q+ SHAQKY+++ + +G
Sbjct: 46  WTEEEHDKFLEALQLFDR-DWKKI-EDFVGSKTVIQIRSHAQKYFLKVQKNG 95


>AT4G01280.2 | Symbols:  | Homeodomain-like superfamily protein |
           chr4:535288-536854 FORWARD LENGTH=303
          Length = 303

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 2/76 (2%)

Query: 112 PGTTLRGSDHERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQK 171
           P T +R     +K    WT++EH +FL  L  + + DW+ I   FV +KT  Q+ SHAQK
Sbjct: 45  PTTKIRKPYTIKKSRENWTDQEHDKFLEALHLFDR-DWKKI-EAFVGSKTVVQIRSHAQK 102

Query: 172 YYIRQKVSGGKDKRRP 187
           Y+++ + SG  +   P
Sbjct: 103 YFLKVQKSGANEHLPP 118


>AT4G01280.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr4:535288-536854 FORWARD LENGTH=302
          Length = 302

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 2/76 (2%)

Query: 112 PGTTLRGSDHERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQK 171
           P T +R     +K    WT++EH +FL  L  + + DW+ I   FV +KT  Q+ SHAQK
Sbjct: 45  PTTKIRKPYTIKKSRENWTDQEHDKFLEALHLFDR-DWKKI-EAFVGSKTVVQIRSHAQK 102

Query: 172 YYIRQKVSGGKDKRRP 187
           Y+++ + SG  +   P
Sbjct: 103 YFLKVQKSGANEHLPP 118


>AT5G17300.1 | Symbols: RVE1 | Homeodomain-like superfamily protein
           | chr5:5690435-5692435 REVERSE LENGTH=387
          Length = 387

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 11/74 (14%)

Query: 110 RKPGTTLRGSDHERKKGVPWTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHA 169
           RKP T  +    ER++   WT+EEHK+F+  L  YG+  WR I  + V +KT  Q+ SHA
Sbjct: 46  RKPYTITK----ERER---WTDEEHKKFVEALKLYGRA-WRRIEEH-VGSKTAVQIRSHA 96

Query: 170 QKYY--IRQKVSGG 181
           QK++  + ++ +GG
Sbjct: 97  QKFFSKVAREATGG 110


>AT2G46830.1 | Symbols: CCA1 | circadian clock associated 1 |
           chr2:19246005-19248717 FORWARD LENGTH=608
          Length = 608

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)

Query: 129 WTEEEHKRFLMGLLKYGKGDWRNIARNFVMTKTPTQVASHAQKYYIR 175
           WTEEEH RF+  L  YG+  W+ I  + V TKT  Q+ SHAQK++ +
Sbjct: 27  WTEEEHNRFIEALRLYGRA-WQKIEEH-VATKTAVQIRSHAQKFFSK 71