Miyakogusa Predicted Gene
- Lj1g3v4118220.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4118220.3 Non Chatacterized Hit- tr|K3XIG9|K3XIG9_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si001691,35.97,2e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; FBOX,F-box domain, cyclin-like; A Recepto,CUFF.31968.3
(166 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G26850.1 | Symbols: | F-box family protein | chr2:11449369-1... 102 2e-22
AT2G32560.1 | Symbols: | F-box family protein | chr2:13824820-1... 101 2e-22
AT2G41170.1 | Symbols: | F-box family protein | chr2:17159310-1... 87 4e-18
>AT2G26850.1 | Symbols: | F-box family protein |
chr2:11449369-11450889 REVERSE LENGTH=371
Length = 371
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 87/169 (51%), Gaps = 15/169 (8%)
Query: 9 SLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTIVGDFAFK 68
S+L+LP+ LDCIL+LL P EL M+ VC+ LR+ C SDHLWE H+ KWG I+G A K
Sbjct: 61 SILDLPDLPLDCILELLPPSELCTMARVCSSLRERCVSDHLWEKHLKTKWGKILGPSAHK 120
Query: 69 EWQWHLTKFKSXXXXXXALLDQNCSLGSFCGSCPLPCTGSYLQDFNQLRTF---LPNNSM 125
EWQ +L S + + LG + S +D + R + +P +S
Sbjct: 121 EWQCYL----SSPYHLDSPHHKTSHLGLAKIISLMRSLSSIFRDDDHRRRYPSSIPLDST 176
Query: 126 LALYFSLQGGKFWFPAQFYRGPRVR--------DALFRHEPTSQTFTAR 166
+ Y SL+ G+FWFPAQ Y DA ++ + TF AR
Sbjct: 177 MNFYLSLETGRFWFPAQVYNRENGHVGFMLSCYDAELSYDTDTNTFQAR 225
>AT2G32560.1 | Symbols: | F-box family protein |
chr2:13824820-13826761 FORWARD LENGTH=371
Length = 371
Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 88/169 (52%), Gaps = 14/169 (8%)
Query: 9 SLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTIVGDFAFK 68
S+L+LPE LDCIL LL P L M+ VC+ LR+ C SDHLWE H+ KWG I+G A +
Sbjct: 61 SVLDLPELALDCILDLLPPSGLCSMARVCSSLRERCVSDHLWEKHLKTKWGKILGPAAHR 120
Query: 69 EWQWHLTKFKSXXXXXXALLDQNCSLGSFCGSCPLPCTGSYLQDFNQLRTF---LPNNSM 125
EWQ +++ S + Q +LG + S ++ Q R + LP +S
Sbjct: 121 EWQCYIS---SSTYHLDSPHHQTGNLGFAKIISLIRSLSSVFREDKQRRGYASSLPLDSS 177
Query: 126 LALYFSLQGGKFWFPAQFYRGPRVR--------DALFRHEPTSQTFTAR 166
++ Y SL+ G+FWFPAQ Y DA ++ + TF AR
Sbjct: 178 MSCYLSLETGRFWFPAQVYNRENGHVGFMLSCYDAELSYDTHTDTFQAR 226
>AT2G41170.1 | Symbols: | F-box family protein |
chr2:17159310-17160845 REVERSE LENGTH=371
Length = 371
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 91/188 (48%), Gaps = 33/188 (17%)
Query: 2 EEDHIDRSLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTI 61
+ED SLL+LP+ LDCIL+ LSP EL M+ VC+ LRD C SDHLWE H+ KWG +
Sbjct: 51 QEDENKMSLLDLPDLTLDCILEKLSPSELCAMTSVCSELRDKCVSDHLWEKHMETKWGRL 110
Query: 62 VGDFAFKEWQWHLTKF---------------KSXXXXXXALLDQNCSLGSFCGSCPLPCT 106
+GD A +EW+ H+ + A L L S G C +
Sbjct: 111 MGDAAIQEWKSHVATIMRCLTSSSSSSRKSKPNWSSRFVANLKPFAWLSSNHG-CENRGS 169
Query: 107 GSYLQDFNQLRTFLPNNSMLALYFSLQGGKFWFPAQFYRGPRVR--------DALFRHEP 158
SYL P +S++ Y +L+ GKFWFPAQ Y DA R++
Sbjct: 170 SSYL---------APIDSVMYWYSNLENGKFWFPAQVYNRENGHVGFMMSCYDAKIRYDF 220
Query: 159 TSQTFTAR 166
+ TF AR
Sbjct: 221 KTDTFQAR 228