Miyakogusa Predicted Gene
- Lj1g3v4117200.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4117200.1 Non Chatacterized Hit- tr|I1MZP8|I1MZP8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51466 PE,72.61,0,B3,B3
DNA binding domain; ZF_CW,Zinc finger, CW-type; B3 DNA binding
domain,B3 DNA binding domain; z,CUFF.31963.1
(853 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G30470.1 | Symbols: HSI2, VAL1 | high-level expression of sug... 648 0.0
AT4G32010.1 | Symbols: HSL1, HSI2-L1, VAL2 | HSI2-like 1 | chr4:... 619 e-177
AT4G21550.1 | Symbols: VAL3 | VP1/ABI3-like 3 | chr4:11463104-11... 226 4e-59
AT3G26790.1 | Symbols: FUS3 | AP2/B3-like transcriptional factor... 90 5e-18
AT3G24650.1 | Symbols: ABI3, SIS10 | AP2/B3-like transcriptional... 83 8e-16
AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor... 77 6e-14
AT1G28300.1 | Symbols: LEC2 | AP2/B3-like transcriptional factor... 76 8e-14
AT3G25730.1 | Symbols: EDF3 | ethylene response DNA binding fact... 76 1e-13
AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor fam... 75 2e-13
AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 | chr1... 75 2e-13
AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor... 75 3e-13
AT2G46870.1 | Symbols: NGA1 | AP2/B3-like transcriptional factor... 74 4e-13
AT1G68840.2 | Symbols: RAV2, AtRAV2 | related to ABI3/VP1 2 | ch... 73 9e-13
AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2, EDF2, AtRAV2 | relate... 73 9e-13
AT2G36080.2 | Symbols: | AP2/B3-like transcriptional factor fam... 72 2e-12
AT5G06250.2 | Symbols: | AP2/B3-like transcriptional factor fam... 72 2e-12
AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor... 72 2e-12
AT5G06250.1 | Symbols: | AP2/B3-like transcriptional factor fam... 71 3e-12
AT3G11580.2 | Symbols: | AP2/B3-like transcriptional factor fam... 66 8e-11
AT3G11580.1 | Symbols: | AP2/B3-like transcriptional factor fam... 66 1e-10
AT1G25560.1 | Symbols: TEM1, EDF1 | AP2/B3 transcription factor ... 65 2e-10
AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 | chr4:1... 57 6e-08
AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 | chr1:2... 56 1e-07
AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 fam... 56 1e-07
AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 | chr2:1... 55 3e-07
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor ... 53 7e-07
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 53 8e-07
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 53 8e-07
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 53 9e-07
AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 53 9e-07
AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 53 1e-06
>AT2G30470.1 | Symbols: HSI2, VAL1 | high-level expression of
sugar-inducible gene 2 | chr2:12980904-12984724 REVERSE
LENGTH=790
Length = 790
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/777 (48%), Positives = 473/777 (60%), Gaps = 84/777 (10%)
Query: 1 MCFR--SSYESSVFCNKFHRQETGWKDCKFCNKPIHCGCIVSRSLFEYLDFGGIACVSCV 58
+C+R S+YESS+FC +FH+ ++GW++C C+K +HCGCI S+ E +D+GG+ C +C
Sbjct: 38 LCYRCGSAYESSLFCEQFHKDQSGWRECYLCSKRLHCGCIASKVTIELMDYGGVGCSTCA 97
Query: 59 NTSLLNMMRNHEHPNWSISFAQTSTMDRHSAHFDCRLFTGSVDEGNLMQLCRVVEASESS 118
LN+ E+P + DR + + +G +EG+L V+ +
Sbjct: 98 CCHQLNLNTRGENPGVFSRLPMKTLADRQHVNGE----SGGRNEGDLFSQPLVMGGDKRE 153
Query: 119 LWNNRSTRDITSISSNNMKPSVQSLTFAALENSRSTRDMTSIHESTA-QPSLGMYLG-NP 176
+ R + S + L A +HES+ QPSL M L NP
Sbjct: 154 EFMPH--RGFGKLMSPESTTTGHRLDAAG-----------EMHESSPLQPSLNMGLAVNP 200
Query: 177 SGSKSVPHSAGENVEGRLEGKTSPPFHQGQRSRPILPK----LLKTGNVETDKGTFSQSR 232
P A E VEG S + IL K + T V + +Q+R
Sbjct: 201 FS----PSFATEAVEGMKHISPSQSNMVHCSASNILQKPSRPAISTPPVASKS---AQAR 253
Query: 233 VARPPAEGRGKNQLLPRYWPRITDQELERLSGDLKSTVVPLFEKVLSASDAGRIGRLVLP 292
+ RPP EGRG+ LLPRYWP+ TD+E++++SG+L +VPLFEK LSASDAGRIGRLVLP
Sbjct: 254 IGRPPVEGRGRGHLLPRYWPKYTDKEVQQISGNLNLNIVPLFEKTLSASDAGRIGRLVLP 313
Query: 293 KACAEAYFPTISHSEGLPLHVQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLCA 352
KACAEAYFP IS SEG+PL +QDV+G EWTFQFR+WPNNNSRMYVLEGVTPCIQSM L A
Sbjct: 314 KACAEAYFPPISQSEGIPLKIQDVRGREWTFQFRYWPNNNSRMYVLEGVTPCIQSMMLQA 373
Query: 353 GDTVTFSRIDPGGKLVMGFRKASISIDAQDASTSALSNGISAKGTDFSGGTENLPS--GS 410
GDTVTFSR+DPGGKL+MG RKA+ +A D L+NG S + T SG TEN PS GS
Sbjct: 374 GDTVTFSRVDPGGKLIMGSRKAA---NAGDMQGCGLTNGTSTEDTSSSGVTENPPSINGS 430
Query: 411 NSTDLLNSTKGNGDSQLNGHPENLHLGTGAADLLKTENCEMTKNHSLQQQISVLEKKRAR 470
+ L+ +LNG PENL N E V EKKR R
Sbjct: 431 SCISLI-------PKELNGMPENL-------------NSETNGGRIGDDPTRVKEKKRTR 470
Query: 471 NIGPKSKRLLIDNEDSMELRLTWEEAQDLLRPPPSVKPSIVTIEDQVFEEYDEPPVFGKR 530
IG K+KRLL+ +E+SMELRLTWEEAQDLLRP PSVKP+IV IE+Q EEYDEPPVFGKR
Sbjct: 471 TIGAKNKRLLLHSEESMELRLTWEEAQDLLRPSPSVKPTIVVIEEQEIEEYDEPPVFGKR 530
Query: 531 TIFSACSSGGKEQWAQCDDCSKWRKLPVDALLPPKWTCSENVWDTSRSSCSTPQELRSGE 590
TI + SG +E+WA CDDCSKWR+LPVDALL KWTC +NVWD SR SCS P+E E
Sbjct: 531 TIVTTKPSGEQERWATCDDCSKWRRLPVDALLSFKWTCIDNVWDVSRCSCSAPEESLK-E 589
Query: 591 VENLLKTNKDSKKRRVVENGKPLQEHEPSGLDALASAAVFGENFVDPAESSAGATTKHPR 650
+EN+LK ++ KKRR E+ + EP GLDALASAAV G+ +P TT+HPR
Sbjct: 590 LENVLKVGREHKKRRTGESQAAKSQQEPCGLDALASAAVLGDTIGEP---EVATTTRHPR 646
Query: 651 HRPGCSCIVCIQPPSGKGRHKPTCTCNVCMTVKRRFKTLMLRKKKRREXXXXXXXXXXQK 710
HR GCSCIVCIQPPSGKGRHKPTC C VC TVKRRFKTLM+R+KK++ ++
Sbjct: 647 HRAGCSCIVCIQPPSGKGRHKPTCGCTVCSTVKRRFKTLMMRRKKKQ----------LER 696
Query: 711 DHSHQIDESDTNGAPQRDDTSHLEKEEGLNKGQSEVGESSAGQIDLNSHP-NREDMQ 766
D + D+ + D S EK E + +IDLNS P N+ED++
Sbjct: 697 DVTAAEDKKKKDMELAESDKSKEEK------------EVNTARIDLNSDPYNKEDVE 741
>AT4G32010.1 | Symbols: HSL1, HSI2-L1, VAL2 | HSI2-like 1 |
chr4:15481231-15484897 FORWARD LENGTH=780
Length = 780
Score = 619 bits (1596), Expect = e-177, Method: Compositional matrix adjust.
Identities = 347/713 (48%), Positives = 440/713 (61%), Gaps = 100/713 (14%)
Query: 6 SYESSVFCNKFHRQETGWKDCKFCNKPIHCGCIVSRSLFEYLDFGGIACVSCVNTS-LLN 64
+YE S+FC FH +E+GW++C C+K +HCGCI SR + E L+ GG+ C+SC S L++
Sbjct: 42 AYEQSIFCEVFHAKESGWRECNSCDKRLHCGCIASRFMMELLENGGVTCISCAKKSGLIS 101
Query: 65 MMRNHE-----HPNWSISFAQTSTMDR----HSAHFDCRLFTGSVDEGNLMQLCRVVEAS 115
M +HE P+++ + S ++R H HF + ++ +
Sbjct: 102 MNVSHESNGKDFPSFASAEHVGSVLERTNLKHLLHF------------------QRIDPT 143
Query: 116 ESSLWNNRSTRDITSISSNNMKPSVQSLTFAALENSRSTRDMTSIHESTAQPSLGMYLGN 175
SSL MK +SL ++L+ + R T E +AQP+L + LG
Sbjct: 144 HSSL---------------QMKQE-ESLLPSSLD---ALRHKTERKELSAQPNLSISLG- 183
Query: 176 PSGSKSVPHSAGENVEGRLEGKTSPPFHQGQRSRPILPKLLKTGNV----ETDKGTFSQS 231
P+ S H A V+ R KT+ F RSR +LPK + + E SQ
Sbjct: 184 PTLMTSPFHDAA--VDDR--SKTNSIFQLAPRSRQLLPKPANSAPIAAGMEPSGSLVSQI 239
Query: 232 RVARPPAEGRGKNQLLPRYWPRITDQELERLSGDL----KSTVVPLFEKVLSASDAGRIG 287
VARPP EGRGK QLLPRYWPRITDQEL +LSG S ++PLFEKVLSASDAGRIG
Sbjct: 240 HVARPPPEGRGKTQLLPRYWPRITDQELLQLSGQYPHLSNSKIIPLFEKVLSASDAGRIG 299
Query: 288 RLVLPKACAEAYFPTISHSEGLPLHVQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQS 347
RLVLPKACAEAYFP IS EGLPL +QD+KG EW FQFRFWPNNNSRMYVLEGVTPCIQS
Sbjct: 300 RLVLPKACAEAYFPPISLPEGLPLKIQDIKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQS 359
Query: 348 MQLCAGDTVTFSRIDPGGKLVMGFRKASISIDAQDASTSALSNGISAKGTDFSGGTENLP 407
MQL AGDTVTFSR +P GKLVMG+RKA
Sbjct: 360 MQLQAGDTVTFSRTEPEGKLVMGYRKA--------------------------------- 386
Query: 408 SGSNSTDLLNSTKGNGDSQLNGHPENLHLGTGAADLLKTENCE-MTKNHSLQQQISVLEK 466
+ S +T + KG+ + LN +L+ G G + K E E M K++ Q +
Sbjct: 387 TNSTATQMF---KGSSEPNLNMFSNSLNPGCGDINWSKLEKSEDMAKDNLFLQSSLTSAR 443
Query: 467 KRARNIGPKSKRLLIDNEDSMELRLTWEEAQDLLRPPPSVKPSIVTIEDQVFEEYDEPPV 526
KR RNIG KSKRLLID+ D +EL++TWEEAQ+LLRPP S KPSI T+E+Q FEEYDEPPV
Sbjct: 444 KRVRNIGTKSKRLLIDSVDVLELKITWEEAQELLRPPQSTKPSIFTLENQDFEEYDEPPV 503
Query: 527 FGKRTIFSACSSGGKEQWAQCDDCSKWRKLPVDALLPPKWTCSENVWDTSRSSCSTPQEL 586
FGKRT+F + +G +EQW QCD C KWR+LPVD LLPPKW+CS+N+ D RSSCS P EL
Sbjct: 504 FGKRTLFVSRQTGEQEQWVQCDACGKWRQLPVDILLPPKWSCSDNLLDPGRSSCSAPDEL 563
Query: 587 RSGEVENLLKTNKDSKKRRVVENGKPL-QEHEPSGLDALASAAVFGENFVDPAESSAGAT 645
E + L++ +K+ K+RR+ + + L Q + S L++L +A + + E + AT
Sbjct: 564 SPREQDTLVRQSKEFKRRRLASSNEKLNQSQDASALNSLGNAGITTTG--EQGEITVAAT 621
Query: 646 TKHPRHRPGCSCIVCIQPPSGKGRHKPTCTCNVCMTVKRRFKTLMLRKKKRRE 698
TKHPRHR GCSCIVC QPPSGKG+HKP+CTC VC VKRRF+TLMLRK+ + E
Sbjct: 622 TKHPRHRAGCSCIVCSQPPSGKGKHKPSCTCTVCEAVKRRFRTLMLRKRNKGE 674
>AT4G21550.1 | Symbols: VAL3 | VP1/ABI3-like 3 |
chr4:11463104-11468486 FORWARD LENGTH=713
Length = 713
Score = 226 bits (577), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 207/421 (49%), Gaps = 45/421 (10%)
Query: 5 SSYESSVFCNKFHRQETGWKDCKFCNKPIHCGCIVSRSLFEYLDFGGIACVSCVNTSLLN 64
S+YE FC+ FH++ +GW+ C+ C K IHCGCI S S + +D GGI C++C
Sbjct: 50 SAYEQGKFCDVFHQRASGWRCCESCGKRIHCGCIASASAYTLMDAGGIECLACARKKFAL 109
Query: 65 MMRNHEHP-----------------NWS-------ISFAQTSTMDRHSAHFDCRLFTGSV 100
P NWS IS+ S +D FD R
Sbjct: 110 GPNFSPSPSFLFQSPISEKFKDLSINWSSSTRSNQISYQPPSCLDPSVLQFDFR------ 163
Query: 101 DEGNLMQLCRVVEASESSLWNNRSTRDITSISSNNMKPSVQSLTFAALENSRSTRDMTSI 160
+ G + + + R + + M + + + N + S+
Sbjct: 164 NRGGNNEFSQPASKERVTACTMEKKRGMNDMIGKLMSENSKHYRVSPFPNVNVYHPLISL 223
Query: 161 HESTAQPSLGMYLGNPSGSKSVPHSAGENVEGRLEGKTSPPFHQGQRSRPILPKLLKTGN 220
E L + + + HS RL+G + S P L +L N
Sbjct: 224 KEGPCGTQLAFPVPITTPIEKTGHS-------RLDGSN---LWHTRNSSP-LSRLHNDLN 272
Query: 221 VETDKGTFSQSRVARPPAEGRGKNQLLPRYWPRIT--DQELERLSGDLKSTVVPLFEKVL 278
D S+SR E GK Q++PR+WP+++ +Q L+ S + +S V PLFEK+L
Sbjct: 273 GGADSPFESKSRNVMAHLETPGKYQVVPRFWPKVSYKNQVLQNQSKESESVVTPLFEKIL 332
Query: 279 SASDAGRIGRLVLPKACAEAYFPTISHSEGLPLHVQDVKGNEWTFQFRFWPNNNSRMYVL 338
SA+D G+ RLVLPK AEA+ P +SH++G+PL VQD G EW FQFRFWP++ R+YVL
Sbjct: 333 SATDTGK--RLVLPKKYAEAFLPQLSHTKGVPLTVQDPMGKEWRFQFRFWPSSKGRIYVL 390
Query: 339 EGVTPCIQSMQLCAGDTVTFSRIDPGGKLVMGFRKASISIDAQDASTSALSNGISAKGTD 398
EGVTP IQ++QL AGDTV FSR+DP KL++GFRKASI+ + A + + + K +
Sbjct: 391 EGVTPFIQTLQLQAGDTVIFSRLDPERKLILGFRKASITQSSDQADPADMHSPFEVKKSA 450
Query: 399 F 399
+
Sbjct: 451 Y 451
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Query: 645 TTKHPRHRPGCSCIVCIQPPSGKG-RHKPTCTCNVCMTVK 683
TTKHPRHR GC+CI+CIQ PSG G +H C+C VC T K
Sbjct: 549 TTKHPRHRDGCTCIICIQSPSGIGPKHDRCCSCAVCDTNK 588
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%)
Query: 466 KKRARNIGPKSKRLLIDNEDSMELRLTWEEAQDLLRPPPSVKPSIVTIEDQVFEEYDEPP 525
KK++ + +SKR ++ D L+LTWEEAQ L PPP++ PS V IED FEEY+E P
Sbjct: 465 KKKSSMMITRSKRQKVEKGDDNLLKLTWEEAQGFLLPPPNLTPSRVVIEDYEFEEYEEAP 524
Query: 526 VFGKRT 531
+ GK T
Sbjct: 525 IIGKPT 530
>AT3G26790.1 | Symbols: FUS3 | AP2/B3-like transcriptional factor
family protein | chr3:9854025-9855748 REVERSE LENGTH=313
Length = 313
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Query: 273 LFEKVLSASDAGRIGRLVLPKACAEAYFPTISHSEGLPLHVQDVKG-NEWTFQFRFWPNN 331
LF+K L SD + R++LPK AEA+ P + EG+P+ ++D+ G + WTF++R+WPNN
Sbjct: 91 LFQKELKNSDVSSLRRMILPKKAAEAHLPALECKEGIPIRMEDLDGFHVWTFKYRYWPNN 150
Query: 332 NSRMYVLEGVTPCIQSMQLCAGDTVTFSRIDPGGKLVMGFRKAS 375
NSRMYVLE + + L GD + + V+ RKAS
Sbjct: 151 NSRMYVLENTGDFVNAHGLQLGDFIMVYQDLYSNNYVIQARKAS 194
>AT3G24650.1 | Symbols: ABI3, SIS10 | AP2/B3-like transcriptional
factor family protein | chr3:8997911-9000780 FORWARD
LENGTH=720
Length = 720
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 273 LFEKVLSASDAGRIGRLVLPKACAEAYFPTISHSEGLPLHVQDVKGNE-WTFQFRFWPNN 331
L +KVL SD G +GR+VLPK AE + P + +G+ L ++D+ + W ++RFWPNN
Sbjct: 571 LLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISLAMEDIGTSRVWNMRYRFWPNN 630
Query: 332 NSRMYVLEGVTPCIQSMQLCAGD-TVTFSRIDPGGKLVMGFR 372
SRMY+LE +++ L GD V +S + G L+ G +
Sbjct: 631 KSRMYLLENTGDFVKTNGLQEGDFIVIYSDVKCGKYLIRGVK 672
>AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor
family protein | chr4:639791-640792 FORWARD LENGTH=333
Length = 333
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 273 LFEKVLSASDAGRIGRLVLPKACAEAYFPTISHSEGLPLHVQDVKGNEWTFQFRFWPNNN 332
+F+KVL+ SD G++ RLV+PK AE +FP + G L QD G W F++ +W N+
Sbjct: 35 MFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQNGTVLDFQDKNGKMWRFRYSYW--NS 92
Query: 333 SRMYVL-EGVTPCIQSMQLCAGDTVTFSR 360
S+ YV+ +G + ++ +L AGDTV+F R
Sbjct: 93 SQSYVMTKGWSRFVKEKKLFAGDTVSFYR 121
>AT1G28300.1 | Symbols: LEC2 | AP2/B3-like transcriptional factor
family protein | chr1:9897054-9899838 REVERSE LENGTH=363
Length = 363
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 273 LFEKVLSASDAGRIGRLVLPKACAEAYFPTISHSEGLPLHVQDVKGNE-WTFQFRFWPNN 331
L EK L SD G +GR+VLPK AEA P +S EG+ + ++DV + W+F+++FW NN
Sbjct: 170 LCEKELKNSDVGSLGRIVLPKRDAEANLPKLSDKEGIVVQMRDVFSMQSWSFKYKFWSNN 229
Query: 332 NSRMYVLEGVTPCIQSMQLCAGDTVTF 358
SRMYVLE ++ GD +T
Sbjct: 230 KSRMYVLENTGEFVKQNGAEIGDFLTI 256
>AT3G25730.1 | Symbols: EDF3 | ethylene response DNA binding factor
3 | chr3:9396505-9397506 FORWARD LENGTH=333
Length = 333
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 11/111 (9%)
Query: 273 LFEKVLSASDAGRIGRLVLPKACAEAYFP------TISHSEGLPLHVQDVKGNEWTFQFR 326
LFEK ++ SD G++ RLV+PK AE +FP +S +G+ L+ +DV G W F++
Sbjct: 182 LFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVS-VKGMLLNFEDVNGKVWRFRYS 240
Query: 327 FWPNNNSRMYVL-EGVTPCIQSMQLCAGDTVTFSRI-DPGGKLVMGFRKAS 375
+W N+S+ YVL +G + ++ +LCAGD ++F R D K +G++ S
Sbjct: 241 YW--NSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSKS 289
>AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr2:15148612-15151411 REVERSE LENGTH=244
Length = 244
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
Query: 273 LFEKVLSASDAGRIGRLVLPKACAEAYFPTISHS-----EGLPLHVQDVKGNEWTFQFRF 327
LFEK L+ SD G++ RLV+PK AE YFP + + +GL L +D +G W F++ +
Sbjct: 37 LFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSY 96
Query: 328 WPNNNSRMYVL-EGVTPCIQSMQLCAGDTVTFSRI-DPGGKLVMGFRK 373
W N+S+ YVL +G + ++ L AGD V F R GG+ +G+R+
Sbjct: 97 W--NSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 |
chr1:4542386-4543420 FORWARD LENGTH=344
Length = 344
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 60/92 (65%), Gaps = 6/92 (6%)
Query: 273 LFEKVLSASDAGRIGRLVLPKACAEAYFPTISHS---EGLPLHVQDVKGNEWTFQFRFWP 329
LFEK ++ SD G++ RLV+PK AE +FP S + +G+ L+ +DV G W F++ +W
Sbjct: 187 LFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYW- 245
Query: 330 NNNSRMYVL-EGVTPCIQSMQLCAGDTVTFSR 360
N+S+ YVL +G + ++ L AGD V+FSR
Sbjct: 246 -NSSQSYVLTKGWSRFVKEKNLRAGDVVSFSR 276
>AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor
family protein | chr3:22951829-22952728 FORWARD
LENGTH=299
Length = 299
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 8/94 (8%)
Query: 273 LFEKVLSASDAGRIGRLVLPKACAEAYFP-----TISHSEGLPLHVQDVKGNEWTFQFRF 327
+F+KV++ SD G++ RLV+PK AE YFP T ++GL L+ +D GN W F++ +
Sbjct: 22 MFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLNFEDRSGNSWRFRYSY 81
Query: 328 WPNNNSRMYVL-EGVTPCIQSMQLCAGDTVTFSR 360
W N+S+ YV+ +G + ++ +L AGD V+F R
Sbjct: 82 W--NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQR 113
>AT2G46870.1 | Symbols: NGA1 | AP2/B3-like transcriptional factor
family protein | chr2:19261313-19262245 FORWARD
LENGTH=310
Length = 310
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 61/91 (67%), Gaps = 5/91 (5%)
Query: 273 LFEKVLSASDAGRIGRLVLPKACAEAYFPTISHS--EGLPLHVQDVKGNEWTFQFRFWPN 330
+F+KV++ SD G++ RLV+PK AE +FP S S +GL L+ +D+ G W F++ +W
Sbjct: 34 MFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLLLNFEDLTGKSWRFRYSYW-- 91
Query: 331 NNSRMYVL-EGVTPCIQSMQLCAGDTVTFSR 360
N+S+ YV+ +G + ++ +L AGD V+F R
Sbjct: 92 NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQR 122
>AT1G68840.2 | Symbols: RAV2, AtRAV2 | related to ABI3/VP1 2 |
chr1:25880442-25881500 FORWARD LENGTH=352
Length = 352
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 7/93 (7%)
Query: 273 LFEKVLSASDAGRIGRLVLPKACAEAYFPTISHS----EGLPLHVQDVKGNEWTFQFRFW 328
LFEK ++ SD G++ RLV+PK AE +FP S S +G+ ++ +DV G W F++ +W
Sbjct: 187 LFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYW 246
Query: 329 PNNNSRMYVL-EGVTPCIQSMQLCAGDTVTFSR 360
N+S+ YVL +G + ++ L AGD VTF R
Sbjct: 247 --NSSQSYVLTKGWSRFVKEKNLRAGDVVTFER 277
>AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2, EDF2, AtRAV2 | related
to ABI3/VP1 2 | chr1:25880442-25881500 FORWARD
LENGTH=352
Length = 352
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 7/93 (7%)
Query: 273 LFEKVLSASDAGRIGRLVLPKACAEAYFPTISHS----EGLPLHVQDVKGNEWTFQFRFW 328
LFEK ++ SD G++ RLV+PK AE +FP S S +G+ ++ +DV G W F++ +W
Sbjct: 187 LFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYW 246
Query: 329 PNNNSRMYVL-EGVTPCIQSMQLCAGDTVTFSR 360
N+S+ YVL +G + ++ L AGD VTF R
Sbjct: 247 --NSSQSYVLTKGWSRFVKEKNLRAGDVVTFER 277
>AT2G36080.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr2:15150890-15151411 REVERSE LENGTH=173
Length = 173
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 9/108 (8%)
Query: 273 LFEKVLSASDAGRIGRLVLPKACAEAYFPTISH-----SEGLPLHVQDVKGNEWTFQFRF 327
LFEK L+ SD G++ RLV+PK AE YFP + +GL L +D +G W F++ +
Sbjct: 37 LFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSY 96
Query: 328 WPNNNSRMYVL-EGVTPCIQSMQLCAGDTVTFSR-IDPGGKLVMGFRK 373
W N+S+ YVL +G + ++ L AGD V F R GG+ +G+R+
Sbjct: 97 W--NSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>AT5G06250.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr5:1892714-1894058 REVERSE LENGTH=282
Length = 282
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 23/148 (15%)
Query: 262 LSGDLKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAYFP------------TISHSEGL 309
L DLK + LFEK L+ SD G++ RLV+PK AE YFP T S +G+
Sbjct: 37 LHDDLKES---LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGM 93
Query: 310 PLHVQDVKGNEWTFQFRFWPNNNSRMYVL-EGVTPCIQSMQLCAGDTVTFSRIDPGG-KL 367
L +D G W F++ +W N+S+ YVL +G + ++ QL GD V F R +L
Sbjct: 94 LLSFEDESGKSWRFRYSYW--NSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRL 151
Query: 368 VMGFRK----ASISIDAQDASTSALSNG 391
+G+R+ +S S+ A +++ + S G
Sbjct: 152 FIGWRRRGQGSSSSVAATNSAVNTSSMG 179
>AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor
family protein | chr1:11864-12940 REVERSE LENGTH=358
Length = 358
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 5/91 (5%)
Query: 273 LFEKVLSASDAGRIGRLVLPKACAEAYFPTIS--HSEGLPLHVQDVKGNEWTFQFRFWPN 330
+F+KV++ SD G++ RLV+PK AE YFP S + G L+ QD G W F++ +W
Sbjct: 55 MFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYSYW-- 112
Query: 331 NNSRMYVL-EGVTPCIQSMQLCAGDTVTFSR 360
N+S+ YV+ +G + ++ +L AGD V+F R
Sbjct: 113 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQR 143
>AT5G06250.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr5:1892714-1894058 REVERSE LENGTH=267
Length = 267
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 23/148 (15%)
Query: 262 LSGDLKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAYFP------------TISHSEGL 309
L DLK + LFEK L+ SD G++ RLV+PK AE YFP T S +G+
Sbjct: 37 LHDDLKES---LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGM 93
Query: 310 PLHVQDVKGNEWTFQFRFWPNNNSRMYVL-EGVTPCIQSMQLCAGDTVTFSRIDPGG-KL 367
L +D G W F++ +W N+S+ YVL +G + ++ QL GD V F R +L
Sbjct: 94 LLSFEDESGKSWRFRYSYW--NSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRL 151
Query: 368 VMGFRK----ASISIDAQDASTSALSNG 391
+G+R+ +S S+ A +++ + S G
Sbjct: 152 FIGWRRRGQGSSSSVAATNSAVNTSSMG 179
>AT3G11580.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr3:3650579-3651271 REVERSE LENGTH=230
Length = 230
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 273 LFEKVLSASDAGRIGRLVLPKACAEAYFP-------------TISHSEGLPLHVQDVKGN 319
LFEK L+ SD G++ RLV+PK AE YFP + +G+ L +D G
Sbjct: 28 LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESGK 87
Query: 320 EWTFQFRFWPNNNSRMYVL-EGVTPCIQSMQLCAGDTVTFS--RIDPGGKLVMGFRK 373
W F++ +W N+S+ YVL +G + ++ L AGD V F R D +L +G+R+
Sbjct: 88 CWKFRYSYW--NSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDL-HRLFIGWRR 141
>AT3G11580.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr3:3649165-3651271 REVERSE LENGTH=267
Length = 267
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 273 LFEKVLSASDAGRIGRLVLPKACAEAYFP-------------TISHSEGLPLHVQDVKGN 319
LFEK L+ SD G++ RLV+PK AE YFP + +G+ L +D G
Sbjct: 28 LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESGK 87
Query: 320 EWTFQFRFWPNNNSRMYVL-EGVTPCIQSMQLCAGDTVTFS--RIDPGGKLVMGFRK 373
W F++ +W N+S+ YVL +G + ++ L AGD V F R D +L +G+R+
Sbjct: 88 CWKFRYSYW--NSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDL-HRLFIGWRR 141
>AT1G25560.1 | Symbols: TEM1, EDF1 | AP2/B3 transcription factor
family protein | chr1:8981891-8982976 REVERSE LENGTH=361
Length = 361
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 13/99 (13%)
Query: 273 LFEKVLSASDAGRIGRLVLPKACAEAYFP----------TISHSEGLPLHVQDVKGNEWT 322
LFEK ++ SD G++ RLV+PK AE +FP S ++G+ ++++D G W
Sbjct: 194 LFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWR 253
Query: 323 FQFRFWPNNNSRMYVL-EGVTPCIQSMQLCAGDTVTFSR 360
F++ +W N+S+ YVL +G + ++ L AGD V F R
Sbjct: 254 FRYSYW--NSSQSYVLTKGWSRFVKEKNLRAGDVVCFER 290
>AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 |
chr4:14703369-14705564 REVERSE LENGTH=670
Length = 670
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 272 PLFEKVLSASDAGRIGRLVLPKACAEAYFPTISHSEGLPLH---VQDVKGNEWTFQFRFW 328
P F K L+ SDA G +P+ CAE FP + ++ P+ +DV G+ W F+ +
Sbjct: 118 PSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFR-HIY 176
Query: 329 PNNNSRMYVLEGVTPCIQSMQLCAGDTVTFSRIDPGGKLVMGFRKA 374
R + G + + +L AGD++ F R + G L +G R+A
Sbjct: 177 RGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAE-NGDLCVGIRRA 221
>AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 |
chr1:29272405-29275193 FORWARD LENGTH=585
Length = 585
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 261 RLSGDLK-STVVPLFEKVLSASDAGRIGRLVLPKACAEAYFPTISHSEGLP---LHVQDV 316
R GD+ + V F K+L+ SDA G +P+ CA++ FP ++ P L+V D+
Sbjct: 105 RFDGDVDDNNKVTTFAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDI 164
Query: 317 KGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLCAGDTVTFSRIDPGGKLVMGFRKASI 376
G W F+ + R + G + + S +L AGD+V F R ++ +G R+ I
Sbjct: 165 HGAVWDFR-HIYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRKS-ADEMFIGVRRTPI 222
>AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 family
protein / auxin-responsive factor AUX/IAA-related |
chr2:14325444-14328613 REVERSE LENGTH=608
Length = 608
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 266 LKSTVVP-LFEKVLSASDAGRIGRLVLPKACAEAYFPTISHSEGLP---LHVQDVKGNEW 321
LK + P +F K L+ASD G +P+ AE FP + +S+ P L +D+ G EW
Sbjct: 150 LKRSNTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEW 209
Query: 322 TFQFRFWPNNNSRMYVLEGVTPCIQSMQLCAGDTVTFSRIDPGGKLVMGFRKASISIDAQ 381
F+ + R + G + + +L +GD V F R D GKL +G R+AS Q
Sbjct: 210 RFR-HIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGD-DGKLRLGVRRAS-----Q 262
Query: 382 DASTSALS 389
T+ALS
Sbjct: 263 IEGTAALS 270
>AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 |
chr2:12114331-12116665 FORWARD LENGTH=693
Length = 693
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 274 FEKVLSASDAGRIGRLVLPKACAEAYFPTISHSEGLPLH---VQDVKGNEWTFQFRFWPN 330
F K L+ SDA G +P+ CAE FP + +S P+ +D+ G W F+ +
Sbjct: 115 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFR-HIYRG 173
Query: 331 NNSRMYVLEGVTPCIQSMQLCAGDTVTFSRIDPGGKLVMGFRKA 374
R + G + + +L AGD++ F R + G L +G R+A
Sbjct: 174 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSE-SGDLCVGIRRA 216
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor B3
family protein / auxin-responsive factor AUX/IAA-related
| chr1:6887353-6891182 FORWARD LENGTH=902
Length = 902
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 273 LFEKVLSASDAGRIGRLVLPKACAEAYFPTISHSEGLP---LHVQDVKGNEWTFQFRFWP 329
F K L+ASD G +P+ AE FP + +S P L V+D+ N WTF+ +
Sbjct: 157 FFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFR-HIYR 215
Query: 330 NNNSRMYVLEGVTPCIQSMQLCAGDTVTFSRIDPGGKLVMGFRKA 374
R + G + + S +L AGD+V F R D +L++G R+A
Sbjct: 216 GQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR-DEKSQLMVGVRRA 259
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1164
Length = 1164
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 273 LFEKVLSASDAGRIGRLVLPKACAEAYFPTISHSEGLP---LHVQDVKGNEWTFQFRFWP 329
F K L+ASD G +P+ AE FP + S P L +D+ N WTF+ +
Sbjct: 126 FFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFR-HIYR 184
Query: 330 NNNSRMYVLEGVTPCIQSMQLCAGDTVTFSRIDPGGKLVMGFRKA 374
R + G + + + +L AGD+V F R D +L++G R+A
Sbjct: 185 GQPKRHLLTTGWSVFVSTKRLFAGDSVLFIR-DGKAQLLLGIRRA 228
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1165
Length = 1165
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 273 LFEKVLSASDAGRIGRLVLPKACAEAYFPTISHSEGLP---LHVQDVKGNEWTFQFRFWP 329
F K L+ASD G +P+ AE FP + S P L +D+ N WTF+ +
Sbjct: 126 FFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFR-HIYR 184
Query: 330 NNNSRMYVLEGVTPCIQSMQLCAGDTVTFSRIDPGGKLVMGFRKA 374
R + G + + + +L AGD+V F R D +L++G R+A
Sbjct: 185 GQPKRHLLTTGWSVFVSTKRLFAGDSVLFIR-DGKAQLLLGIRRA 228
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1150
Length = 1150
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 273 LFEKVLSASDAGRIGRLVLPKACAEAYFPTISHSEGLP---LHVQDVKGNEWTFQFRFWP 329
F K L+ASD G +P+ AE FP + S P L +D+ N WTF+ +
Sbjct: 126 FFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFR-HIYR 184
Query: 330 NNNSRMYVLEGVTPCIQSMQLCAGDTVTFSRIDPGGKLVMGFRKA 374
R + G + + + +L AGD+V F R D +L++G R+A
Sbjct: 185 GQPKRHLLTTGWSVFVSTKRLFAGDSVLFIR-DGKAQLLLGIRRA 228
>AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=935
Length = 935
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Query: 274 FEKVLSASDAGRIGRLVLPKACAEAYFPTISHSEGLP---LHVQDVKGNEWTFQ--FRFW 328
F K L+ASD G +P+ AE FP + +S+ P L +D+ NEW F+ FR
Sbjct: 129 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQ 188
Query: 329 PNNNSRMYVLEGVTPCIQSMQLCAGDTVTFSRIDPGGKLVMGFRKA 374
P R + G + + + +L AGD+V F D +L++G R+A
Sbjct: 189 PK---RHLLTTGWSVFVSAKRLVAGDSVLFIWND-KNQLLLGIRRA 230
>AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=933
Length = 933
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Query: 274 FEKVLSASDAGRIGRLVLPKACAEAYFPTISHSEGLP---LHVQDVKGNEWTFQ--FRFW 328
F K L+ASD G +P+ AE FP + +S+ P L +D+ NEW F+ FR
Sbjct: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQ 186
Query: 329 PNNNSRMYVLEGVTPCIQSMQLCAGDTVTFSRIDPGGKLVMGFRKA 374
P R + G + + + +L AGD+V F D +L++G R+A
Sbjct: 187 PK---RHLLTTGWSVFVSAKRLVAGDSVLFIWND-KNQLLLGIRRA 228