Miyakogusa Predicted Gene
- Lj1g3v4093260.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4093260.1 Non Chatacterized Hit- tr|I3S0U1|I3S0U1_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=4
SV,69.49,1e-17,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.31902.1
(490 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G40820.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 659 0.0
AT3G56480.1 | Symbols: | myosin heavy chain-related | chr3:2093... 642 0.0
AT2G26770.2 | Symbols: | plectin-related | chr2:11404257-114077... 608 e-174
AT2G26770.1 | Symbols: | plectin-related | chr2:11404257-114077... 608 e-174
>AT2G40820.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
plasma membrane; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: myosin heavy chain-related
(TAIR:AT3G56480.1); Has 203 Blast hits to 195 proteins
in 64 species: Archae - 3; Bacteria - 13; Metazoa - 26;
Fungi - 15; Plants - 101; Viruses - 0; Other Eukaryotes
- 45 (source: NCBI BLink). | chr2:17036768-17039474
REVERSE LENGTH=492
Length = 492
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/493 (65%), Positives = 407/493 (82%), Gaps = 6/493 (1%)
Query: 1 MTKISPEIEIKMPME--AVPPVSADVSFISDRFPKYKLGADSQILEETVEDNQGPSLKDV 58
MTK+ P+ E K + V P+SADVSF S+ FP YKLG D QI++E ED++ PS+KDV
Sbjct: 1 MTKVCPKTEEKRVVSEAVVEPISADVSFASNHFPTYKLGPDDQIVDEPDEDDKVPSVKDV 60
Query: 59 IEQEATNLSDQHKRISVRDLACKFDKNLAAAAKLSNEAKIREVASLEGHVLLKKLRDALE 118
+ +E +LSDQHK++SVRDLACKFDKNLAAA+KL +EAK+ +V SLEGHV+LKKLRDALE
Sbjct: 61 VGKETGDLSDQHKKLSVRDLACKFDKNLAAASKLVDEAKLNDVTSLEGHVMLKKLRDALE 120
Query: 119 YLRVRFAGRNKEDVEKAISMVEALAVKLTQNEGELIQEKFEVKKLLNFLKQASEDAKKLV 178
+R R GRN+E VEKAISMVEALAVKLTQNEGELI +KFEVKKL +FLK+AS+DAKKLV
Sbjct: 121 TMRGRMDGRNREAVEKAISMVEALAVKLTQNEGELIHDKFEVKKLASFLKKASDDAKKLV 180
Query: 179 NQEKSFACAEIESARSVVLRIGEALEEQEQDSQASKPQ--DVDGLVEEVQEARRIKLLHQ 236
NQEKSFACAEIESAR++V+++G A EEQE S+AS+ Q +V+ LVEEVQEARRI+ LH+
Sbjct: 181 NQEKSFACAEIESARALVMKLGGAFEEQELCSKASRDQGPNVEKLVEEVQEARRIRRLHK 240
Query: 237 PSKVMAMEYELRALRDQIREKSIFSIKLQKELTMSKRDEENKSHPYMLHGSEALGSYLKV 296
P+ V+ M++ELR L+ QI+EKS +S+KLQ+E+ + K+ E +KS PY+L G+++LGS L++
Sbjct: 241 PTMVIGMQHELRDLKSQIQEKSAYSVKLQREIAIIKKAEGSKSCPYVLDGAQSLGSCLRI 300
Query: 297 QPRSGEVPQVSKCSFQWYRLSSEGSWREVISGADKSIYAPDPFDVGRILQVDIVSNGKKL 356
+ S +SKCS WYR +SE S RE ISGA++S+YAP+PFDVGR++Q DIVSNG+K
Sbjct: 301 RASSDSGIDISKCSIHWYRAASESSRREAISGANRSVYAPEPFDVGRVIQADIVSNGQKF 360
Query: 357 TLTTN-PIQTASGLGSHVEALLRKSNTDFHVVISQMNGKDHSSRSTHSFNVGRMRIKLCR 415
T+TT+ PI TA+GL S VE+LLRKSN++F VVISQMNG+DH+SRS H F VG+ RIKL R
Sbjct: 361 TVTTDGPINTAAGLQSRVESLLRKSNSEFTVVISQMNGQDHASRS-HVFTVGKARIKLSR 419
Query: 416 GWITKAREIYSPSMQLCGVRGDASNAAKALFWQARKGLSFVLTFESEKERNVAIMIARKY 475
GWITKAREIYS SMQLCGVRG+A+ AKALFWQ RKGL+F+LTFESE+ERN AI++AR Y
Sbjct: 420 GWITKAREIYSTSMQLCGVRGNANVPAKALFWQLRKGLTFLLTFESEQERNAAIVLARTY 479
Query: 476 ALDCNVVLAGPDD 488
A DCNV L GPDD
Sbjct: 480 AYDCNVTLVGPDD 492
>AT3G56480.1 | Symbols: | myosin heavy chain-related |
chr3:20936480-20938986 REVERSE LENGTH=490
Length = 490
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/492 (66%), Positives = 401/492 (81%), Gaps = 6/492 (1%)
Query: 1 MTKISPEIEIKMPMEAVPPVSADVSFISDRFPKYKLGADSQILEETVEDNQGPSLKDVIE 60
MTK+ PEIE +V PVS DVSF SD FP YKLG D+QI+EE ED +GPS+K+ +E
Sbjct: 1 MTKVCPEIE-GTLSLSVVPVSVDVSFASDHFPTYKLGPDNQIVEEPKEDEKGPSVKETVE 59
Query: 61 QEATNLSDQHKRISVRDLACKFDKNLAAAAKLSNEAKIREVASLEGHVLLKKLRDALEYL 120
+E+ LSDQHKR+SVRDLA KFDKNLAAA L+NEAK+REVASLEGHV+LKKLRDALEY+
Sbjct: 60 KESELLSDQHKRLSVRDLASKFDKNLAAAVSLANEAKLREVASLEGHVMLKKLRDALEYM 119
Query: 121 RVRFAGRNKEDVEKAISMVEALAVKLTQNEGELIQEKFEVKKLLNFLKQASEDAKKLVNQ 180
R R G+NK+DVE AISMVEALAVKLTQNEGELIQEKFEVKKL NFLKQ SEDAKKLVNQ
Sbjct: 120 RGRTDGQNKQDVETAISMVEALAVKLTQNEGELIQEKFEVKKLGNFLKQTSEDAKKLVNQ 179
Query: 181 EKSFACAEIESARSVVLRIGEALEEQEQDSQASKPQ--DVDGLVEEVQEARRIKLLHQPS 238
EKSF+CAEIE+AR+VVLR+GEA EEQE+ S+AS+ Q DV+ LVEEVQEAR+IK +H P+
Sbjct: 180 EKSFSCAEIETARAVVLRLGEAFEEQERISEASRAQGPDVEKLVEEVQEARQIKRMHHPT 239
Query: 239 KVMAMEYELRALRDQIREKSIFSIKLQKELTMSKRDEENKSHPYMLHGSEALGSYLKVQP 298
KVM M++EL LR++I+EK + S+KL KE+ + KR EE+KS P++L G ++LGS L+++
Sbjct: 240 KVMGMQHELHGLRNRIQEKYMNSVKLHKEIAIIKRVEESKSCPFVLEGKQSLGSCLRIRV 299
Query: 299 RSGE-VPQVSKCSFQWYRLSSEGSWREVISGADKSIYAPDPFDVGRILQVDIVSNGKKLT 357
+ + P +S CS QWYR + E S RE ISGA +S+YAP+PFDVGRILQ DI+SNG+K T
Sbjct: 300 NAQDNAPDLSNCSIQWYRAACETSRREAISGAIQSMYAPEPFDVGRILQADILSNGQKFT 359
Query: 358 LTT-NPIQTASGLGSHVEALLRKSNTDFHVVISQMNGKDHSSRSTHSFNVGRMRIKLCRG 416
+TT +P+ SGL S VE+L+RKSN++F VVISQMNG+D++SRS H F VG+ RIKL RG
Sbjct: 360 VTTDDPVDPDSGLPSRVESLMRKSNSEFSVVISQMNGQDYASRS-HVFTVGKTRIKLSRG 418
Query: 417 WITKAREIYSPSMQLCGVRGDASNAAKALFWQARKGLSFVLTFESEKERNVAIMIARKYA 476
WITKARE+YS SMQLCGVRG+ KA+FWQ RK L+F+LTFESE ERN AI +ARKYA
Sbjct: 419 WITKARELYSTSMQLCGVRGNIKAPTKAVFWQPRKSLTFILTFESEHERNAAIALARKYA 478
Query: 477 LDCNVVLAGPDD 488
DC+V L GPDD
Sbjct: 479 FDCSVTLLGPDD 490
>AT2G26770.2 | Symbols: | plectin-related | chr2:11404257-11407743
REVERSE LENGTH=496
Length = 496
Score = 608 bits (1567), Expect = e-174, Method: Compositional matrix adjust.
Identities = 300/489 (61%), Positives = 388/489 (79%), Gaps = 2/489 (0%)
Query: 1 MTKISPEIEIKMPMEAVPPVSADVSFISDRFPKYKLGADSQILEETVEDNQGPSLKDVIE 60
MT+++ + + + VP VSADV F S RFP Y++GA+ QI + +D + S+K+V+
Sbjct: 1 MTRVTRDFRDSLQRDGVPAVSADVKFASSRFPNYRIGANDQIFD-VKDDPKVMSMKEVVA 59
Query: 61 QEATNLSDQHKRISVRDLACKFDKNLAAAAKLSNEAKIREVASLEGHVLLKKLRDALEYL 120
+E L DQ KR+SVRDLA KF+K LAAAAKLS EAK++E SLE HVLLKKLRDALE L
Sbjct: 60 RETAQLMDQQKRLSVRDLAHKFEKGLAAAAKLSEEAKLKEATSLEKHVLLKKLRDALESL 119
Query: 121 RVRFAGRNKEDVEKAISMVEALAVKLTQNEGELIQEKFEVKKLLNFLKQASEDAKKLVNQ 180
R R AGRNK+DVE+AI+MVEALAV+LTQ EGEL EK EVKKL +FLKQASEDAKKLV++
Sbjct: 120 RGRVAGRNKDDVEEAIAMVEALAVQLTQREGELFIEKAEVKKLASFLKQASEDAKKLVDE 179
Query: 181 EKSFACAEIESARSVVLRIGEALEEQEQDSQASKPQDVDGLVEEVQEARRIKLLHQPSKV 240
E++FA AEIESAR+ V R+ EAL E EQ S+AS QD++ L++EVQEARRIK+LHQPS+V
Sbjct: 180 ERAFARAEIESARAAVQRVEEALREHEQMSRASGKQDMEDLMKEVQEARRIKMLHQPSRV 239
Query: 241 MAMEYELRALRDQIREKSIFSIKLQKELTMSKRDEENKSHPYMLHGSEALGSYLKVQPRS 300
M MEYELRALR+Q+ EKS ++LQK+L M ++ EEN S Y + G+EALGS L+V+P S
Sbjct: 240 MDMEYELRALRNQLAEKSKHFLQLQKKLAMCRKSEENISLVYEIDGTEALGSCLRVRPCS 299
Query: 301 GEVPQVSKCSFQWYRLSSEGSWREVISGADKSIYAPDPFDVGRILQVDIVSNGKKLTLTT 360
+ P +SKC+ QWYR SS+GS +E+ISGA KS+YAP+PFDVGR+L DI+ +G L+L+T
Sbjct: 300 NDAPDLSKCTIQWYRSSSDGSKKELISGATKSVYAPEPFDVGRVLHADIIYDGHSLSLST 359
Query: 361 -NPIQTASGLGSHVEALLRKSNTDFHVVISQMNGKDHSSRSTHSFNVGRMRIKLCRGWIT 419
I A+GLGS+VEAL+RK + DF+VV++QM+G+DH+S S H F+VG+MRIKLC+G
Sbjct: 360 VGKIDPAAGLGSYVEALVRKHDVDFNVVVTQMSGEDHTSESIHLFHVGKMRIKLCKGKTV 419
Query: 420 KAREIYSPSMQLCGVRGDASNAAKALFWQARKGLSFVLTFESEKERNVAIMIARKYALDC 479
A+E YS +MQLCGVRG + AA+AL+WQA+KG+SFV+ FESE+ERN AIM+AR++A DC
Sbjct: 420 IAKEYYSSAMQLCGVRGGGNAAAQALYWQAKKGVSFVIAFESERERNAAIMLARRFACDC 479
Query: 480 NVVLAGPDD 488
NV LAGP+D
Sbjct: 480 NVTLAGPED 488
>AT2G26770.1 | Symbols: | plectin-related | chr2:11404257-11407743
REVERSE LENGTH=496
Length = 496
Score = 608 bits (1567), Expect = e-174, Method: Compositional matrix adjust.
Identities = 300/489 (61%), Positives = 388/489 (79%), Gaps = 2/489 (0%)
Query: 1 MTKISPEIEIKMPMEAVPPVSADVSFISDRFPKYKLGADSQILEETVEDNQGPSLKDVIE 60
MT+++ + + + VP VSADV F S RFP Y++GA+ QI + +D + S+K+V+
Sbjct: 1 MTRVTRDFRDSLQRDGVPAVSADVKFASSRFPNYRIGANDQIFD-VKDDPKVMSMKEVVA 59
Query: 61 QEATNLSDQHKRISVRDLACKFDKNLAAAAKLSNEAKIREVASLEGHVLLKKLRDALEYL 120
+E L DQ KR+SVRDLA KF+K LAAAAKLS EAK++E SLE HVLLKKLRDALE L
Sbjct: 60 RETAQLMDQQKRLSVRDLAHKFEKGLAAAAKLSEEAKLKEATSLEKHVLLKKLRDALESL 119
Query: 121 RVRFAGRNKEDVEKAISMVEALAVKLTQNEGELIQEKFEVKKLLNFLKQASEDAKKLVNQ 180
R R AGRNK+DVE+AI+MVEALAV+LTQ EGEL EK EVKKL +FLKQASEDAKKLV++
Sbjct: 120 RGRVAGRNKDDVEEAIAMVEALAVQLTQREGELFIEKAEVKKLASFLKQASEDAKKLVDE 179
Query: 181 EKSFACAEIESARSVVLRIGEALEEQEQDSQASKPQDVDGLVEEVQEARRIKLLHQPSKV 240
E++FA AEIESAR+ V R+ EAL E EQ S+AS QD++ L++EVQEARRIK+LHQPS+V
Sbjct: 180 ERAFARAEIESARAAVQRVEEALREHEQMSRASGKQDMEDLMKEVQEARRIKMLHQPSRV 239
Query: 241 MAMEYELRALRDQIREKSIFSIKLQKELTMSKRDEENKSHPYMLHGSEALGSYLKVQPRS 300
M MEYELRALR+Q+ EKS ++LQK+L M ++ EEN S Y + G+EALGS L+V+P S
Sbjct: 240 MDMEYELRALRNQLAEKSKHFLQLQKKLAMCRKSEENISLVYEIDGTEALGSCLRVRPCS 299
Query: 301 GEVPQVSKCSFQWYRLSSEGSWREVISGADKSIYAPDPFDVGRILQVDIVSNGKKLTLTT 360
+ P +SKC+ QWYR SS+GS +E+ISGA KS+YAP+PFDVGR+L DI+ +G L+L+T
Sbjct: 300 NDAPDLSKCTIQWYRSSSDGSKKELISGATKSVYAPEPFDVGRVLHADIIYDGHSLSLST 359
Query: 361 -NPIQTASGLGSHVEALLRKSNTDFHVVISQMNGKDHSSRSTHSFNVGRMRIKLCRGWIT 419
I A+GLGS+VEAL+RK + DF+VV++QM+G+DH+S S H F+VG+MRIKLC+G
Sbjct: 360 VGKIDPAAGLGSYVEALVRKHDVDFNVVVTQMSGEDHTSESIHLFHVGKMRIKLCKGKTV 419
Query: 420 KAREIYSPSMQLCGVRGDASNAAKALFWQARKGLSFVLTFESEKERNVAIMIARKYALDC 479
A+E YS +MQLCGVRG + AA+AL+WQA+KG+SFV+ FESE+ERN AIM+AR++A DC
Sbjct: 420 IAKEYYSSAMQLCGVRGGGNAAAQALYWQAKKGVSFVIAFESERERNAAIMLARRFACDC 479
Query: 480 NVVLAGPDD 488
NV LAGP+D
Sbjct: 480 NVTLAGPED 488