Miyakogusa Predicted Gene
- Lj1g3v4093250.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4093250.1 Non Chatacterized Hit- tr|I3S1U1|I3S1U1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.3,0,Cyclin-like,Cyclin-like; domain present in cyclins, TFIIB
and Retinob,Cyclin-like; seg,NULL; no desc,CUFF.31889.1
(299 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G37490.1 | Symbols: CYC1, CYCB1;1, CYCB1 | CYCLIN B1;1 | chr4... 241 3e-64
AT5G06150.1 | Symbols: CYC1BAT, CYCB1;2 | Cyclin family protein ... 231 5e-61
AT3G11520.1 | Symbols: CYCB1;3, CYC2 | CYCLIN B1;3 | chr3:362547... 215 3e-56
AT2G26760.1 | Symbols: CYCB1;4 | Cyclin B1;4 | chr2:11401551-114... 195 4e-50
AT1G34460.2 | Symbols: CYCB1;5 | CYCLIN B1;5 | chr1:12595110-125... 163 1e-40
AT1G34460.1 | Symbols: CYCB1;5, CYC3 | CYCLIN B1;5 | chr1:125951... 162 2e-40
AT1G20610.1 | Symbols: CYCB2;3 | Cyclin B2;3 | chr1:7135073-7137... 141 5e-34
AT1G76310.1 | Symbols: CYCB2;4 | CYCLIN B2;4 | chr1:28628046-286... 135 3e-32
AT4G35620.1 | Symbols: CYCB2;2 | Cyclin B2;2 | chr4:16901744-169... 114 6e-26
AT2G17620.1 | Symbols: CYCB2;1 | Cyclin B2;1 | chr2:7664164-7666... 114 7e-26
AT1G16330.1 | Symbols: CYCB3;1 | cyclin b3;1 | chr1:5582387-5587... 110 2e-24
AT1G44110.1 | Symbols: CYCA1;1 | Cyclin A1;1 | chr1:16775035-167... 107 8e-24
AT1G47210.2 | Symbols: CYCA3;2 | cyclin-dependent protein kinase... 102 4e-22
AT1G77390.1 | Symbols: TAM, CYCA1;2, DYP, CYCA1 | CYCLIN A1;2 | ... 101 7e-22
AT5G43080.1 | Symbols: CYCA3;1 | Cyclin A3;1 | chr5:17293227-172... 99 4e-21
AT1G80370.1 | Symbols: CYCA2;4 | Cyclin A2;4 | chr1:30214694-302... 98 8e-21
AT5G25380.1 | Symbols: CYCA2;1 | cyclin a2;1 | chr5:8815230-8817... 97 2e-20
AT1G47230.1 | Symbols: CYCA3;4 | CYCLIN A3;4 | chr1:17306752-173... 94 8e-20
AT5G11300.1 | Symbols: CYC3B, CYC2BAT, CYCA2;2 | mitotic-like cy... 94 1e-19
AT1G47220.1 | Symbols: CYCA3;3 | Cyclin A3;3 | chr1:17303676-173... 92 5e-19
AT1G15570.1 | Symbols: CYCA2;3 | CYCLIN A2;3 | chr1:5363034-5365... 90 2e-18
AT1G47230.2 | Symbols: CYCA3;4 | CYCLIN A3;4 | chr1:17306752-173... 90 2e-18
AT1G47210.1 | Symbols: CYCA3;2 | cyclin-dependent protein kinase... 86 4e-17
AT1G14750.1 | Symbols: SDS | Cyclin family protein | chr1:507967... 51 7e-07
AT1G14750.2 | Symbols: SDS | Cyclin family protein | chr1:507967... 50 2e-06
>AT4G37490.1 | Symbols: CYC1, CYCB1;1, CYCB1 | CYCLIN B1;1 |
chr4:17622129-17624208 REVERSE LENGTH=428
Length = 428
Score = 241 bits (616), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 153/296 (51%), Positives = 179/296 (60%), Gaps = 46/296 (15%)
Query: 1 MASRPVVPQQPRGDAVVGGGKQQPKKXXXXXXXXXXXLGDIGNLDPVRGIEVKPN----- 55
M SR +VPQQ D VV GK K LGDIGN+ VRG K N
Sbjct: 2 MTSRSIVPQQSTDDVVVVDGKNVAKGRNRQV------LGDIGNV--VRGNYPKNNEPEKI 53
Query: 56 --RPITRSFCXXXXXXXXXXXXXXXXXXXXCPNXXXXXXXXXXXXXXXXKREA-PKPVTK 112
RP TRS KR A PKP K
Sbjct: 54 NHRPRTRS-------------------------QNPTLLVEDNLKKPVVKRNAVPKP--K 86
Query: 113 RVTGKPKPVVEVIEISPD--EQIXXXXXXXXXXXXXXXXTLTSVLTARSKAACGLTNKPK 170
+V GKPK VV+VIEIS D E++ T TSVLTARSKAACGL K K
Sbjct: 87 KVAGKPK-VVDVIEISSDSDEELGLVAAREKKATKKKATTYTSVLTARSKAACGLEKKQK 145
Query: 171 EEIVDIDASDVDNELAAVEYIEDIYKFYKMVENESRPHCYMASQPEINEKMRAILVDWLI 230
E+IVDID++DV+N+LAAVEY+EDIY FYK VE+E RP YMASQP+INEKMR ILV+WLI
Sbjct: 146 EKIVDIDSADVENDLAAVEYVEDIYSFYKSVESEWRPRDYMASQPDINEKMRLILVEWLI 205
Query: 231 DVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEV 286
DVH +FEL+ ET YLT+NI+DRFL+VK VPR+ELQLVG+S++LM+AKYEEIWPP+V
Sbjct: 206 DVHVRFELNPETFYLTVNILDRFLSVKPVPRKELQLVGLSALLMSAKYEEIWPPQV 261
>AT5G06150.1 | Symbols: CYC1BAT, CYCB1;2 | Cyclin family protein |
chr5:1859542-1861570 REVERSE LENGTH=445
Length = 445
Score = 231 bits (589), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 142/295 (48%), Positives = 175/295 (59%), Gaps = 24/295 (8%)
Query: 1 MASRPVVPQQPRGDAVVGGGKQQPKKXXXXXXXXXXXLGDIGNLDPVRGIE---VKP--N 55
MA+R VP+Q RG +V G K Q K LGDIGNL V G++ +P N
Sbjct: 1 MATRANVPEQVRGAPLVDGLKIQNKNGAVKSRRA---LGDIGNLVSVPGVQGGKAQPPIN 57
Query: 56 RPITRSFCXXXXXXXXXXXXXXXXXXXXCPNXXXXXXXXXXXXXXXXKREAPKPVTKR-- 113
RPITRSF + EA + V K+
Sbjct: 58 RPITRSF------RAQLLANAQLERKPINGDNKVPALGPKRQPLAARNPEAQRAVQKKNL 111
Query: 114 -VTGKPKPVVEVIEISPDEQIXXXXXXXXXXXXXXXXTLTSVLTARSKAACGLTNKPKEE 172
V + KPV EVIE + T +SVL+ARSKAACG+ NKPK
Sbjct: 112 VVKQQTKPV-EVIETKKE----VTKKEVAMSPKNKKVTYSSVLSARSKAACGIVNKPK-- 164
Query: 173 IVDIDASDVDNELAAVEYIEDIYKFYKMVENESRPHCYMASQPEINEKMRAILVDWLIDV 232
I+DID SD DN LAAVEY++D+Y FYK VE ES+P YM Q E+NEKMRAIL+DWL++V
Sbjct: 165 IIDIDESDKDNHLAAVEYVDDMYSFYKEVEKESQPKMYMHIQTEMNEKMRAILIDWLLEV 224
Query: 233 HTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEVN 287
H KFEL+LETLYLT+NI+DRFL+VK VP+RELQLVGIS++L+A+KYEEIWPP+VN
Sbjct: 225 HIKFELNLETLYLTVNIIDRFLSVKAVPKRELQLVGISALLIASKYEEIWPPQVN 279
>AT3G11520.1 | Symbols: CYCB1;3, CYC2 | CYCLIN B1;3 |
chr3:3625475-3627139 REVERSE LENGTH=414
Length = 414
Score = 215 bits (547), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/292 (45%), Positives = 167/292 (57%), Gaps = 41/292 (14%)
Query: 1 MASRPVVPQQP-RGDAVVGGGKQQPKKXXXXXXXXXXXLGDIGNLDPVRGIEV-KPNRPI 58
MA+ PVV QP RGD P LGDIGN+D + G+E K NRPI
Sbjct: 1 MATGPVVHPQPVRGD---------PIDLKNAAAKNRRALGDIGNVDSLIGVEGGKLNRPI 51
Query: 59 TRSFCXXXXXXXXXXXXXXXXXXXXCPNXXXXXXXXXXXXXXXXKREAPKPVTKRVTG-- 116
TR+F P K+E + V K+ G
Sbjct: 52 TRNF----RAQLLENAQVAAAANKKAP----------ILDGVTKKQEVVRAVQKKARGDK 97
Query: 117 -KPKPVVEVIEISPDEQIXXXXXXXXXXXXXXXXTLTSVLTARSKAACGLTNKPKEEIVD 175
+P +EVI ISPD T +SVL ARSKAA + +D
Sbjct: 98 REPSKPIEVIVISPDTN-----EVAKAKENKKKVTYSSVLDARSKAAS--------KTLD 144
Query: 176 IDASDVDNELAAVEYIEDIYKFYKMVENESRPHCYMASQPEINEKMRAILVDWLIDVHTK 235
ID D +N+LAAVEY+ED+Y FYK V NES+P YM +QPEI+EKMR+IL+DWL++VH K
Sbjct: 145 IDYVDKENDLAAVEYVEDMYIFYKEVVNESKPQMYMHTQPEIDEKMRSILIDWLVEVHVK 204
Query: 236 FELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEVN 287
F+LS ETLYLT+NI+DRFL++KTVPRRELQLVG+S++L+A+KYEEIWPP+VN
Sbjct: 205 FDLSPETLYLTVNIIDRFLSLKTVPRRELQLVGVSALLIASKYEEIWPPQVN 256
>AT2G26760.1 | Symbols: CYCB1;4 | Cyclin B1;4 |
chr2:11401551-11403205 FORWARD LENGTH=387
Length = 387
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 99/165 (60%), Positives = 118/165 (71%), Gaps = 4/165 (2%)
Query: 123 EVIEISPDEQIXXXXXXXXXXXXXXXXTLTSVLTARSKAACGLTNKPKEEIVDIDASDVD 182
EVI ISPDE T T+ L ARSKAA GL K+ ++DIDA D +
Sbjct: 67 EVIVISPDENEKCKPHFSRRTHIRGTKTFTATLRARSKAASGL----KDAVIDIDAVDAN 122
Query: 183 NELAAVEYIEDIYKFYKMVENESRPHCYMASQPEINEKMRAILVDWLIDVHTKFELSLET 242
NELAAVEY+EDI+KFY+ VE E Y+ SQPEINEKMR+IL+DWL+DVH KFEL ET
Sbjct: 123 NELAAVEYVEDIFKFYRTVEEEGGIKDYIGSQPEINEKMRSILIDWLVDVHRKFELMPET 182
Query: 243 LYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEVN 287
LYLTIN+VDRFL++ V RRELQL+G+ +ML+A KYEEIW PEVN
Sbjct: 183 LYLTINLVDRFLSLTMVHRRELQLLGLGAMLIACKYEEIWAPEVN 227
>AT1G34460.2 | Symbols: CYCB1;5 | CYCLIN B1;5 |
chr1:12595110-12599354 FORWARD LENGTH=483
Length = 483
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 76/111 (68%), Positives = 93/111 (83%), Gaps = 2/111 (1%)
Query: 156 TARSKAACGLTNKPKEEIVDIDASDVDNELAAVEYIEDIYKFYKMVENESRPHCYMASQP 215
T R+KAACG+ NKPK I+DID SD DN +AAVEY++D+Y FYK VE ES+P YM Q
Sbjct: 237 TKRNKAACGIVNKPK--ILDIDESDKDNHVAAVEYVDDMYSFYKEVEKESQPKMYMHIQT 294
Query: 216 EINEKMRAILVDWLIDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQL 266
E+NEKMRAIL+DWL++VH KFEL+LETLYLT+NI+DRFL VK VP+RELQ+
Sbjct: 295 EMNEKMRAILIDWLLEVHIKFELNLETLYLTVNIIDRFLYVKAVPKRELQV 345
>AT1G34460.1 | Symbols: CYCB1;5, CYC3 | CYCLIN B1;5 |
chr1:12595110-12599628 FORWARD LENGTH=491
Length = 491
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/111 (68%), Positives = 93/111 (83%), Gaps = 2/111 (1%)
Query: 156 TARSKAACGLTNKPKEEIVDIDASDVDNELAAVEYIEDIYKFYKMVENESRPHCYMASQP 215
A+SKAACG+ NKPK I+DID SD DN +AAVEY++D+Y FYK VE ES+P YM Q
Sbjct: 240 NAQSKAACGIVNKPK--ILDIDESDKDNHVAAVEYVDDMYSFYKEVEKESQPKMYMHIQT 297
Query: 216 EINEKMRAILVDWLIDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQL 266
E+NEKMRAIL+DWL++VH KFEL+LETLYLT+NI+DRFL VK VP+RELQ+
Sbjct: 298 EMNEKMRAILIDWLLEVHIKFELNLETLYLTVNIIDRFLYVKAVPKRELQV 348
>AT1G20610.1 | Symbols: CYCB2;3 | Cyclin B2;3 | chr1:7135073-7137273
REVERSE LENGTH=429
Length = 429
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 94/122 (77%), Gaps = 1/122 (0%)
Query: 167 NKPKEEIVDIDASDVDNELAAVEYIEDIYKFYKMVENES-RPHCYMASQPEINEKMRAIL 225
+K +E ++DIDA D +N LAAVEYI D++ FYK E S P YM +Q ++NE+MR IL
Sbjct: 154 DKEEEPVIDIDACDKNNPLAAVEYIHDMHTFYKNFEKLSCVPPNYMDNQQDLNERMRGIL 213
Query: 226 VDWLIDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPE 285
+DWLI+VH KFEL ETLYLTIN++DRFLAV + R++LQLVG++++L+A KYEE+ P
Sbjct: 214 IDWLIEVHYKFELMEETLYLTINVIDRFLAVHQIVRKKLQLVGVTALLLACKYEEVSVPV 273
Query: 286 VN 287
V+
Sbjct: 274 VD 275
>AT1G76310.1 | Symbols: CYCB2;4 | CYCLIN B2;4 |
chr1:28628046-28630199 REVERSE LENGTH=431
Length = 431
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 93/122 (76%), Gaps = 6/122 (4%)
Query: 170 KEEIVDIDASDVDNELAAVEYIEDIYKFYKMVENESR---PHCYMASQPEINEKMRAILV 226
+E ++DID+ D +N L+ VEYI DIY FYK +NE R P YM +Q +INE+MR IL
Sbjct: 157 EESVMDIDSCDKNNPLSVVEYINDIYCFYK--KNECRSCVPPNYMENQHDINERMRGILF 214
Query: 227 DWLIDVHTKFELSLETLYLTINIVDRFLAV-KTVPRRELQLVGISSMLMAAKYEEIWPPE 285
DWLI+VH KFEL ETLYLTIN++DRFLAV + + R++LQLVG+++ML+A KYEE+ P
Sbjct: 215 DWLIEVHYKFELMEETLYLTINLIDRFLAVHQHIARKKLQLVGVTAMLLACKYEEVSVPV 274
Query: 286 VN 287
V+
Sbjct: 275 VD 276
>AT4G35620.1 | Symbols: CYCB2;2 | Cyclin B2;2 |
chr4:16901744-16903766 FORWARD LENGTH=429
Length = 429
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 89/115 (77%), Gaps = 1/115 (0%)
Query: 173 IVDIDASDVDNELAAVEYIEDIYKFYKMVENES-RPHCYMASQPEINEKMRAILVDWLID 231
++DID D +N LAAVEY++D+Y FY+ E S P YMA Q +I++KMRAIL+DWLI+
Sbjct: 155 VLDIDEYDANNSLAAVEYVQDLYDFYRKTERFSCVPLDYMAQQFDISDKMRAILIDWLIE 214
Query: 232 VHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEV 286
VH KFEL ETL+LT+N++DRFL+ + V R++LQLVG+ ++L+A KYEE+ P V
Sbjct: 215 VHDKFELMNETLFLTVNLIDRFLSKQAVARKKLQLVGLVALLLACKYEEVSVPIV 269
>AT2G17620.1 | Symbols: CYCB2;1 | Cyclin B2;1 | chr2:7664164-7666261
FORWARD LENGTH=429
Length = 429
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 90/118 (76%), Gaps = 1/118 (0%)
Query: 170 KEEIVDIDASDVDNELAAVEYIEDIYKFYKMVENES-RPHCYMASQPEINEKMRAILVDW 228
+E IVDID D N LAAVEY++D+Y FY+ +E S P YM Q ++NEKMRAIL+DW
Sbjct: 151 EEPIVDIDVLDSKNSLAAVEYVQDLYAFYRTMERFSCVPVDYMMQQIDLNEKMRAILIDW 210
Query: 229 LIDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEV 286
LI+VH KF+L ETL+LT+N++DRFL+ + V R++LQLVG+ ++L+A KYEE+ P V
Sbjct: 211 LIEVHDKFDLINETLFLTVNLIDRFLSKQNVMRKKLQLVGLVALLLACKYEEVSVPVV 268
>AT1G16330.1 | Symbols: CYCB3;1 | cyclin b3;1 | chr1:5582387-5587391
REVERSE LENGTH=648
Length = 648
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 94/141 (66%), Gaps = 8/141 (5%)
Query: 150 TLTSVLTARSK--AACGLTNKPKEEIVDIDASDVDNELAAVEYIEDIYKFYKMVE--NES 205
+ TS+L SK G T +P E++ ID D N+L EY++DIY+FY E N +
Sbjct: 356 SFTSLLVNGSKFDEKNGETTEP-EKLPSID--DESNQLEVAEYVDDIYQFYWTAEALNPA 412
Query: 206 RPHCYMASQPEINEKMRAILVDWLIDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQ 265
H Y+++ E++ R IL++WLI+VH KF+L ETLYLT++++DR+L+ + + E+Q
Sbjct: 413 LGH-YLSAHAEVSPVTRGILINWLIEVHFKFDLMHETLYLTMDLLDRYLSQVPIHKNEMQ 471
Query: 266 LVGISSMLMAAKYEEIWPPEV 286
L+G++++L+A+KYE+ W P +
Sbjct: 472 LIGLTALLLASKYEDYWHPRI 492
>AT1G44110.1 | Symbols: CYCA1;1 | Cyclin A1;1 |
chr1:16775035-16777182 REVERSE LENGTH=460
Length = 460
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 84/123 (68%), Gaps = 4/123 (3%)
Query: 170 KEEIVDIDASDVDNELAAVEYIEDIYKFYKMVENESRPHC-YMAS-QPEINEKMRAILVD 227
K +IV+ID+++ D +L A + DIYK + E + RP YM Q ++N MR ILVD
Sbjct: 175 KNQIVNIDSNNGDPQLCAT-FACDIYKHLRASEAKKRPDVDYMERVQKDVNSSMRGILVD 233
Query: 228 WLIDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEV- 286
WLI+V ++ L ETLYLT+N +DR+L+ + R++LQL+G++ M++AAKYEEI P+V
Sbjct: 234 WLIEVSEEYRLVPETLYLTVNYIDRYLSGNVISRQKLQLLGVACMMIAAKYEEICAPQVE 293
Query: 287 NFC 289
FC
Sbjct: 294 EFC 296
>AT1G47210.2 | Symbols: CYCA3;2 | cyclin-dependent protein kinase
3;2 | chr1:17301036-17302584 FORWARD LENGTH=372
Length = 372
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 84/120 (70%), Gaps = 6/120 (5%)
Query: 175 DIDASDVDNELAAVEYIEDIYKFYKMVENESR----PHCYMASQPEINEKMRAILVDWLI 230
DID+ D ++ Y+ DIY++ + +E + + P Q ++ MR +LVDWL+
Sbjct: 88 DIDSRSDDPQMCG-PYVADIYEYLRQLEVKPKQRPLPDYIEKVQKDVTPSMRGVLVDWLV 146
Query: 231 DVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEV-NFC 289
+V +++L ETLYLT++ +DRFL++KTV +++LQLVG+S+ML+A+KYEEI PP+V +FC
Sbjct: 147 EVAEEYKLGSETLYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIASKYEEISPPKVDDFC 206
>AT1G77390.1 | Symbols: TAM, CYCA1;2, DYP, CYCA1 | CYCLIN A1;2 |
chr1:29081904-29084137 REVERSE LENGTH=442
Length = 442
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 82/121 (67%), Gaps = 4/121 (3%)
Query: 172 EIVDIDASDVDNELAAVEYIEDIYKFYKMVENESRPHC-YMA-SQPEINEKMRAILVDWL 229
EIV+ID+ +D +L A + DIY+ ++ E RP YM +Q IN MR+IL+DWL
Sbjct: 161 EIVNIDSDLMDPQLCA-SFACDIYEHLRVSEVNKRPALDYMERTQSSINASMRSILIDWL 219
Query: 230 IDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEV-NF 288
++V ++ LS ETLYL +N VDR+L + ++ LQL+G++ M++AAKYEE+ P+V +F
Sbjct: 220 VEVAEEYRLSPETLYLAVNYVDRYLTGNAINKQNLQLLGVTCMMIAAKYEEVCVPQVEDF 279
Query: 289 C 289
C
Sbjct: 280 C 280
>AT5G43080.1 | Symbols: CYCA3;1 | Cyclin A3;1 |
chr5:17293227-17294789 FORWARD LENGTH=355
Length = 355
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 82/118 (69%), Gaps = 4/118 (3%)
Query: 175 DIDASDVDNELAAVEYIEDIYKFYKMVENESRPHC-YMAS-QPEINEKMRAILVDWLIDV 232
DID D ++ Y+ I+++ + +E +SRP Y+ Q ++ MR +LVDWL++V
Sbjct: 73 DIDTRSDDPQMCG-PYVTSIFEYLRQLEVKSRPLVDYIEKIQKDVTSNMRGVLVDWLVEV 131
Query: 233 HTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEV-NFC 289
+++L +TLYL ++ +DRFL++KTV ++ LQL+G++SML+A+KYEEI PP V +FC
Sbjct: 132 AEEYKLLSDTLYLAVSYIDRFLSLKTVNKQRLQLLGVTSMLIASKYEEITPPNVDDFC 189
>AT1G80370.1 | Symbols: CYCA2;4 | Cyclin A2;4 |
chr1:30214694-30216861 FORWARD LENGTH=461
Length = 461
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 83/131 (63%), Gaps = 6/131 (4%)
Query: 162 ACGLTNKPKEEIVDIDASDVDNELAAVEYIEDIYKFYKMVENESRPH-CYM-ASQPEINE 219
+CG + PK VDID+ D D L ++ Y DIY ++ E + RP +M +Q ++ E
Sbjct: 172 SCGGASSPK--FVDIDSDDKDPLLCSL-YAPDIYYNLRVAELKRRPFPDFMEKTQRDVTE 228
Query: 220 KMRAILVDWLIDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYE 279
MR ILVDWL++V ++ L +TLYLT+ ++D FL V R+ LQL+GI+ ML+A+KYE
Sbjct: 229 TMRGILVDWLVEVSEEYTLVPDTLYLTVYLIDWFLHGNYVERQRLQLLGITCMLIASKYE 288
Query: 280 EIWPPEV-NFC 289
EI P + FC
Sbjct: 289 EIHAPRIEEFC 299
>AT5G25380.1 | Symbols: CYCA2;1 | cyclin a2;1 | chr5:8815230-8817566
FORWARD LENGTH=437
Length = 437
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 80/121 (66%), Gaps = 4/121 (3%)
Query: 172 EIVDIDASDVDNELAAVEYIEDIYKFYKMVENESRPH-CYMAS-QPEINEKMRAILVDWL 229
+IVDID+ D + ++ Y IY + E E RP YM Q +I+ MR IL+DWL
Sbjct: 156 QIVDIDSGVQDPQFCSL-YAASIYDSINVAELEQRPSTSYMVQVQRDIDPTMRGILIDWL 214
Query: 230 IDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEV-NF 288
++V +++L +TLYLT+N++DRF++ + +++LQL+GI+ ML+A+KYEEI P + F
Sbjct: 215 VEVSEEYKLVSDTLYLTVNLIDRFMSHNYIEKQKLQLLGITCMLIASKYEEISAPRLEEF 274
Query: 289 C 289
C
Sbjct: 275 C 275
>AT1G47230.1 | Symbols: CYCA3;4 | CYCLIN A3;4 |
chr1:17306752-17308587 FORWARD LENGTH=369
Length = 369
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Query: 214 QPEINEKMRAILVDWLIDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSML 273
Q ++ MRA+LVDWL++V +++L +TLYLTI+ VDRFL+VK + R++LQLVG+S+ML
Sbjct: 123 QSDLTPHMRAVLVDWLVEVAEEYKLVSDTLYLTISYVDRFLSVKPINRQKLQLVGVSAML 182
Query: 274 MAAKYEEIWPPEV-NFC 289
+A+KYEEI PP+V +FC
Sbjct: 183 IASKYEEIGPPKVEDFC 199
>AT5G11300.1 | Symbols: CYC3B, CYC2BAT, CYCA2;2 | mitotic-like
cyclin 3B from Arabidopsis | chr5:3601811-3604466
REVERSE LENGTH=436
Length = 436
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 79/121 (65%), Gaps = 4/121 (3%)
Query: 172 EIVDIDASDVDNELAAVEYIEDIYKFYKMVENESRPHC-YMA-SQPEINEKMRAILVDWL 229
++VDID S+V++ Y DIY + E + RP YM Q +I+ MR IL+DWL
Sbjct: 155 QVVDID-SNVEDPQCCSLYAADIYDNIHVAELQQRPLANYMELVQRDIDPDMRKILIDWL 213
Query: 230 IDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEV-NF 288
++V ++L +TLYLT+N++DRFL+ + R+ LQL+G+S ML+A+KYEE+ P V F
Sbjct: 214 VEVSDDYKLVPDTLYLTVNLIDRFLSNSYIERQRLQLLGVSCMLIASKYEELSAPGVEEF 273
Query: 289 C 289
C
Sbjct: 274 C 274
>AT1G47220.1 | Symbols: CYCA3;3 | Cyclin A3;3 |
chr1:17303676-17305197 FORWARD LENGTH=327
Length = 327
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 81/122 (66%), Gaps = 6/122 (4%)
Query: 175 DIDASDVDNELAAVEYIEDIYKFYKMVENE--SRP-HCYMAS-QPEINEKMRAILVDWLI 230
DIDA D ++ + Y+ DIY++ + +E + RP H Y+ Q +I R +LVDWL+
Sbjct: 42 DIDARSDDPQMCGL-YVSDIYEYLRELEVKPKLRPLHDYIEKIQEDITPSKRGVLVDWLV 100
Query: 231 DVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAAKYEEIWPPEV-NFC 289
+V +FEL ETLYLT++ +DRFL++K V LQLVG+S+M +A+KYEE P+V +FC
Sbjct: 101 EVAEEFELVSETLYLTVSYIDRFLSLKMVNEHWLQLVGVSAMFIASKYEEKRRPKVEDFC 160
Query: 290 NL 291
+
Sbjct: 161 YI 162
>AT1G15570.1 | Symbols: CYCA2;3 | CYCLIN A2;3 | chr1:5363034-5365218
FORWARD LENGTH=450
Length = 450
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 85/141 (60%), Gaps = 5/141 (3%)
Query: 153 SVLTARSKAACGLTNKPK-EEIVDIDASDVDNELAAVEYIEDIYKFYKMVENESRPH-CY 210
S TA A G + P + VDID+ D D L + Y +I+ ++ E + RP +
Sbjct: 151 SASTAEKSAVIGSSTVPDIPKFVDIDSDDKDPLLCCL-YAPEIHYNLRVSELKRRPLPDF 209
Query: 211 MAS-QPEINEKMRAILVDWLIDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGI 269
M Q ++ + MR ILVDWL++V ++ L+ +TLYLT+ ++D FL V R++LQL+GI
Sbjct: 210 MERIQKDVTQSMRGILVDWLVEVSEEYTLASDTLYLTVYLIDWFLHGNYVQRQQLQLLGI 269
Query: 270 SSMLMAAKYEEIWPPEV-NFC 289
+ ML+A+KYEEI P + FC
Sbjct: 270 TCMLIASKYEEISAPRIEEFC 290
>AT1G47230.2 | Symbols: CYCA3;4 | CYCLIN A3;4 |
chr1:17306752-17308587 FORWARD LENGTH=370
Length = 370
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 64/78 (82%), Gaps = 2/78 (2%)
Query: 214 QPEINEKMRAILVDWLIDVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSML 273
Q ++ MRA+LVDWL++V +++L +TLYLTI+ VDRFL+VK + R++LQLVG+S+ML
Sbjct: 123 QSDLTPHMRAVLVDWLVEVAEEYKLVSDTLYLTISYVDRFLSVKPINRQKLQLVGVSAML 182
Query: 274 MAA-KYEEIWPPEV-NFC 289
+A+ KYEEI PP+V +FC
Sbjct: 183 IASRKYEEIGPPKVEDFC 200
>AT1G47210.1 | Symbols: CYCA3;2 | cyclin-dependent protein kinase
3;2 | chr1:17301036-17301695 FORWARD LENGTH=192
Length = 192
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 72/106 (67%), Gaps = 5/106 (4%)
Query: 175 DIDASDVDNELAAVEYIEDIYKFYKMVENESR----PHCYMASQPEINEKMRAILVDWLI 230
DID+ D ++ Y+ DIY++ + +E + + P Q ++ MR +LVDWL+
Sbjct: 88 DIDSRSDDPQMCG-PYVADIYEYLRQLEVKPKQRPLPDYIEKVQKDVTPSMRGVLVDWLV 146
Query: 231 DVHTKFELSLETLYLTINIVDRFLAVKTVPRRELQLVGISSMLMAA 276
+V +++L ETLYLT++ +DRFL++KTV +++LQLVG+S+ML+A+
Sbjct: 147 EVAEEYKLGSETLYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIAS 192
>AT1G14750.1 | Symbols: SDS | Cyclin family protein |
chr1:5079674-5082423 REVERSE LENGTH=578
Length = 578
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 192 EDIYKFYKMVENESRPHCYM----------ASQPEINEKMRAILVDWLIDVHTKFELSLE 241
E++ + Y + R H YM + ++R+I+V W++ + L E
Sbjct: 347 EEVEESYLRLRERERSHAYMRDCAKAYCSRMDNTGLIPRLRSIMVQWIVKQCSDMGLQQE 406
Query: 242 TLYLTINIVDRFLAVKTV-PRRELQLVGISSMLMAAKYEEIWP 283
TL+L + ++DRFL+ + R L LVGI+S+ +A + EE P
Sbjct: 407 TLFLGVGLLDRFLSKGSFKSERTLILVGIASLTLATRIEENQP 449
>AT1G14750.2 | Symbols: SDS | Cyclin family protein |
chr1:5079674-5082423 REVERSE LENGTH=410
Length = 410
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 192 EDIYKFYKMVENESRPHCYM----------ASQPEINEKMRAILVDWLIDVHTKFELSLE 241
E++ + Y + R H YM + ++R+I+V W++ + L E
Sbjct: 179 EEVEESYLRLRERERSHAYMRDCAKAYCSRMDNTGLIPRLRSIMVQWIVKQCSDMGLQQE 238
Query: 242 TLYLTINIVDRFLAVKTV-PRRELQLVGISSMLMAAKYEEIWP 283
TL+L + ++DRFL+ + R L LVGI+S+ +A + EE P
Sbjct: 239 TLFLGVGLLDRFLSKGSFKSERTLILVGIASLTLATRIEENQP 281