Miyakogusa Predicted Gene

Lj1g3v4081730.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4081730.1 CUFF.31907.1
         (207 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G12390.1 | Symbols:  | Nascent polypeptide-associated complex...   228   2e-60
AT5G13850.1 | Symbols: NACA3 | nascent polypeptide-associated co...   224   5e-59
AT3G49470.1 | Symbols: NACA2 | nascent polypeptide-associated co...   197   5e-51
AT4G10480.2 | Symbols:  | Nascent polypeptide-associated complex...   192   1e-49
AT4G10480.1 | Symbols:  | Nascent polypeptide-associated complex...   192   1e-49
AT1G33040.1 | Symbols: NACA5 | nascent polypeptide-associated co...   174   4e-44

>AT3G12390.1 | Symbols:  | Nascent polypeptide-associated complex
           (NAC), alpha subunit family protein |
           chr3:3942344-3943595 FORWARD LENGTH=203
          Length = 203

 Score =  228 bits (582), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 128/208 (61%), Positives = 147/208 (70%), Gaps = 6/208 (2%)

Query: 1   MTAQSQEELLAAHLEQQKIHXXX-XXXXXXXXXXXXXXXXXXXXXNIEGQEGDASGRSKQ 59
           MT + ++E+LAA LE+QKI                            +G +G+A G+SKQ
Sbjct: 1   MTTE-EKEILAAKLEEQKIDLDKPEVEDDDDNEDDDSDDDDKDDDEADGLDGEAGGKSKQ 59

Query: 60  TRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNIVFVISKPDVFKSPTSDTYIIFGEAKIE 119
           +RSEKKSRKAMLKLGMKP+TGVSRVTVKKSKNI+FVISKPDVFKSP SDTY+IFGEAKIE
Sbjct: 60  SRSEKKSRKAMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIE 119

Query: 120 DLSSQLQTQAAEQFKAPNLGNVGLKPESSGVAQXXXXXXXXXXXXXXXXXPKDVELVMTQ 179
           DLSSQ+Q+QAAEQFKAP+L NV  K ESS  A                  PKD+ELVMTQ
Sbjct: 120 DLSSQIQSQAAEQFKAPDLSNVISKGESSSAAV----VQDDEEVDEEGVEPKDIELVMTQ 175

Query: 180 ATVSRPKAVKALKAANGDIVAAIMELTN 207
           A VSRP AVKALKAA+GDIV+AIMELT 
Sbjct: 176 AGVSRPNAVKALKAADGDIVSAIMELTT 203


>AT5G13850.1 | Symbols: NACA3 | nascent polypeptide-associated
           complex subunit alpha-like protein 3 |
           chr5:4471361-4472676 FORWARD LENGTH=204
          Length = 204

 Score =  224 bits (570), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 129/207 (62%), Positives = 145/207 (70%), Gaps = 5/207 (2%)

Query: 1   MTAQSQEELLAAHLEQQKIHXXXXXXXXXXXXXXXXXXXXXXXXNIEGQEGDASGRSKQT 60
           MTA+ + EL AA LE+QKI                            G +G+A GRSKQ+
Sbjct: 1   MTAEQKVEL-AAKLEEQKIDLDKPEVEDDDDNDEDDSEDDDEAE---GHDGEAGGRSKQS 56

Query: 61  RSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNIVFVISKPDVFKSPTSDTYIIFGEAKIED 120
           RSEKKSRKAMLKLGMKP+TGVSRVTVKKSKNI+FVISKPDVFKSP SDTY+IFGEAKIED
Sbjct: 57  RSEKKSRKAMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIED 116

Query: 121 LSSQLQTQAAEQFKAPNLGNVGLKPESSGVAQXXX-XXXXXXXXXXXXXXPKDVELVMTQ 179
           LSSQLQ+QAAEQFKAPNL NV  + E+S  A                   PKD+ELVMTQ
Sbjct: 117 LSSQLQSQAAEQFKAPNLSNVISQGETSSAATAAAVQDDDDEEVDEEGVEPKDIELVMTQ 176

Query: 180 ATVSRPKAVKALKAANGDIVAAIMELT 206
           A VS+P+AVKALK ANGDIV+AIMELT
Sbjct: 177 AGVSKPRAVKALKLANGDIVSAIMELT 203


>AT3G49470.1 | Symbols: NACA2 | nascent polypeptide-associated
           complex subunit alpha-like protein 2 |
           chr3:18341072-18342273 FORWARD LENGTH=217
          Length = 217

 Score =  197 bits (500), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 99/154 (64%), Positives = 118/154 (76%)

Query: 54  SGRSKQTRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNIVFVISKPDVFKSPTSDTYIIF 113
           SG SKQ+RSEKKSRKAMLKLGMKPVTGVSRVT+K++KN++F ISKPDVFKSP S+TY+IF
Sbjct: 64  SGSSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNVLFFISKPDVFKSPHSETYVIF 123

Query: 114 GEAKIEDLSSQLQTQAAEQFKAPNLGNVGLKPESSGVAQXXXXXXXXXXXXXXXXXPKDV 173
           GEAKIEDLSSQLQTQAA+QF+ P +G    + E+S                      +D+
Sbjct: 124 GEAKIEDLSSQLQTQAAQQFRMPEIGATSQRAEASTATVEAQVEEDEEEIDETGVEARDI 183

Query: 174 ELVMTQATVSRPKAVKALKAANGDIVAAIMELTN 207
           +LVMTQA VSR KAVKALK+ +GDIV+AIMELT 
Sbjct: 184 DLVMTQAGVSRSKAVKALKSHDGDIVSAIMELTT 217


>AT4G10480.2 | Symbols:  | Nascent polypeptide-associated complex
           (NAC), alpha subunit family protein |
           chr4:6478089-6479079 REVERSE LENGTH=211
          Length = 211

 Score =  192 bits (489), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 97/150 (64%), Positives = 117/150 (78%)

Query: 57  SKQTRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNIVFVISKPDVFKSPTSDTYIIFGEA 116
           SKQ+RSEKKSRKAMLKLGMKPVT VSRVT+K+SKN++FVISKPDVFKSP S+TY+IFGEA
Sbjct: 61  SKQSRSEKKSRKAMLKLGMKPVTDVSRVTIKRSKNVLFVISKPDVFKSPNSETYVIFGEA 120

Query: 117 KIEDLSSQLQTQAAEQFKAPNLGNVGLKPESSGVAQXXXXXXXXXXXXXXXXXPKDVELV 176
           KI+D+SSQLQ QAA++FK P++ ++    + S  A                   KD++LV
Sbjct: 121 KIDDMSSQLQAQAAQRFKMPDVASMIPNTDGSEAATVAQEEEDDEDVDETGVEAKDIDLV 180

Query: 177 MTQATVSRPKAVKALKAANGDIVAAIMELT 206
           MTQA VSRPKAVKALK +NGDIV+AIMELT
Sbjct: 181 MTQAGVSRPKAVKALKESNGDIVSAIMELT 210


>AT4G10480.1 | Symbols:  | Nascent polypeptide-associated complex
           (NAC), alpha subunit family protein |
           chr4:6478089-6479079 REVERSE LENGTH=212
          Length = 212

 Score =  192 bits (489), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 97/150 (64%), Positives = 117/150 (78%)

Query: 57  SKQTRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNIVFVISKPDVFKSPTSDTYIIFGEA 116
           SKQ+RSEKKSRKAMLKLGMKPVT VSRVT+K+SKN++FVISKPDVFKSP S+TY+IFGEA
Sbjct: 62  SKQSRSEKKSRKAMLKLGMKPVTDVSRVTIKRSKNVLFVISKPDVFKSPNSETYVIFGEA 121

Query: 117 KIEDLSSQLQTQAAEQFKAPNLGNVGLKPESSGVAQXXXXXXXXXXXXXXXXXPKDVELV 176
           KI+D+SSQLQ QAA++FK P++ ++    + S  A                   KD++LV
Sbjct: 122 KIDDMSSQLQAQAAQRFKMPDVASMIPNTDGSEAATVAQEEEDDEDVDETGVEAKDIDLV 181

Query: 177 MTQATVSRPKAVKALKAANGDIVAAIMELT 206
           MTQA VSRPKAVKALK +NGDIV+AIMELT
Sbjct: 182 MTQAGVSRPKAVKALKESNGDIVSAIMELT 211


>AT1G33040.1 | Symbols: NACA5 | nascent polypeptide-associated
           complex subunit alpha-like protein 5 |
           chr1:11966547-11967696 FORWARD LENGTH=209
          Length = 209

 Score =  174 bits (440), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 87/150 (58%), Positives = 114/150 (76%)

Query: 57  SKQTRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNIVFVISKPDVFKSPTSDTYIIFGEA 116
           +KQ+RSEKKSRKA+LKLGMKPV+ VSRVT+K++KN++FVISKPDV+KSP ++TY+IFGEA
Sbjct: 59  AKQSRSEKKSRKAVLKLGMKPVSDVSRVTIKRAKNVLFVISKPDVYKSPNAETYVIFGEA 118

Query: 117 KIEDLSSQLQTQAAEQFKAPNLGNVGLKPESSGVAQXXXXXXXXXXXXXXXXXPKDVELV 176
           K++DLSSQLQTQAA++FK P++ ++     S                       +D++LV
Sbjct: 119 KVDDLSSQLQTQAAQRFKMPDVTSMLPNAGSEATMAPLAEEEDEDDVDDTGVEARDIDLV 178

Query: 177 MTQATVSRPKAVKALKAANGDIVAAIMELT 206
           MTQA VS+ KAV ALKA +GDIV+AIMELT
Sbjct: 179 MTQAGVSKAKAVSALKANDGDIVSAIMELT 208