Miyakogusa Predicted Gene

Lj1g3v4080440.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4080440.1 Non Chatacterized Hit- tr|C6TBC0|C6TBC0_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,77.54,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; PORR,Plant
organelle RNA recognition domain,CUFF.31834.1
         (423 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G45790.2 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   511   e-145
AT5G45790.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   436   e-122
AT1G06440.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   265   5e-71
AT4G33495.1 | Symbols: RPD1 | Ubiquitin carboxyl-terminal hydrol...   263   2e-70
AT5G48040.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   165   6e-41
AT3G58520.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   164   1e-40
AT4G01037.1 | Symbols: WTF1, AtWTF1 | Ubiquitin carboxyl-termina...   147   1e-35
AT3G58520.2 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   141   9e-34
AT5G21970.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   140   2e-33
AT1G79120.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   137   1e-32
AT2G31290.2 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   137   2e-32
AT2G31290.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   137   2e-32
AT1G71850.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   135   4e-32
AT4G24320.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   127   1e-29
AT2G39120.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   126   2e-29
AT5G62990.1 | Symbols: emb1692 | Ubiquitin carboxyl-terminal hyd...   125   4e-29
AT3G63090.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   118   8e-27
AT4G08940.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   100   3e-21

>AT5G45790.2 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr5:18572345-18573664 FORWARD
           LENGTH=439
          Length = 439

 Score =  511 bits (1317), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 256/426 (60%), Positives = 320/426 (75%), Gaps = 17/426 (3%)

Query: 1   MNLLSSLRYRIFQS-------TTISF-SPFILFHQRRWKKPTISAQTRLEDRVRDPHLDN 52
           MN L SLRY   +        T  SF  P   ++QRRW KP  SAQTRLE+R RD  LD 
Sbjct: 17  MNSLKSLRYSSIREALTHQNPTKSSFLCPLYFYNQRRWLKPVDSAQTRLENRTRDHQLDK 76

Query: 53  FMTHLKKLYLVLGFHNLMSNRKRGPFVSLQLMSRWRNILGLNVTVGSFLHKYPHVFEVFA 112
            +  ++KL ++L    LMS++KRGPFVSLQLMSRW+N++GLNV VG+F+ KYPH FE+F 
Sbjct: 77  IIPQIRKLNIILEISKLMSSKKRGPFVSLQLMSRWKNLVGLNVNVGAFIGKYPHAFEIFT 136

Query: 113 HPFRRNPCCRFTRKMKELILLERVVVKELEMEAVKRVKKLLMMSVNGTLRVHALRLMRRE 172
           HPF +N CC+ T K K LI  E  VV+E E++AVKRVKKLL++S +G LRVHALRL+R+E
Sbjct: 137 HPFSKNLCCKITEKFKVLIDEEENVVRECEVDAVKRVKKLLLLSKHGVLRVHALRLIRKE 196

Query: 173 LGLPQDFRDSILGKYSGDFRLVDLEVVALVGWDDE-LGTAQVEKWREKEYTEKWLSEFET 231
           LGLP+DFRDSIL KYS +FRLVDLE + LV  DDE L  A+VE+WRE EY EKWLS+FET
Sbjct: 197 LGLPEDFRDSILAKYSSEFRLVDLETLELVDRDDESLCVAKVEEWREVEYREKWLSKFET 256

Query: 232 KFAFPINFPTGFKIERGFREKLKNWQRLPYTKPYERKEGIRVRTCGGVQRYEKRAVAVLH 291
            +AFPI+ PTGFKIE+GFRE+LKNWQR+PY KPY+RKE  R     G++R+EKR VAV+H
Sbjct: 257 NYAFPIHLPTGFKIEKGFREELKNWQRVPYVKPYDRKEISR-----GLERFEKRVVAVIH 311

Query: 292 ELLSLTVEKMVEVDQLAHFRRDFAIEVNVRELLLTHPGIFYISTKGKAQTVFLREAYSKG 351
           ELLSLTVEKMVEV++LAHFR+D  IEVNVRE++L HPGIFY+STKG +QT+FLREAYSKG
Sbjct: 312 ELLSLTVEKMVEVERLAHFRKDLGIEVNVREVILKHPGIFYVSTKGSSQTLFLREAYSKG 371

Query: 352 GLVEPNPVYTARRNMLDLILLGRRKTKQFLDCDSKSKEES---NAVVYELDDEGVQRQGD 408
            L+EPNP+Y  RR MLDL+LL  R ++  L  + ++  E    + ++   +D    R GD
Sbjct: 372 CLIEPNPIYNVRRKMLDLVLLKTRYSRMLLQREDETHREEKSRDVLISSNEDWEGGRDGD 431

Query: 409 WVIPFL 414
           WV+P L
Sbjct: 432 WVLPIL 437


>AT5G45790.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr5:18572473-18573664 FORWARD
           LENGTH=354
          Length = 354

 Score =  436 bits (1122), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 213/341 (62%), Positives = 268/341 (78%), Gaps = 9/341 (2%)

Query: 78  FVSLQLMSRWRNILGLNVTVGSFLHKYPHVFEVFAHPFRRNPCCRFTRKMKELILLERVV 137
           F + +LMSRW+N++GLNV VG+F+ KYPH FE+F HPF +N CC+ T K K LI  E  V
Sbjct: 17  FSTNKLMSRWKNLVGLNVNVGAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENV 76

Query: 138 VKELEMEAVKRVKKLLMMSVNGTLRVHALRLMRRELGLPQDFRDSILGKYSGDFRLVDLE 197
           V+E E++AVKRVKKLL++S +G LRVHALRL+R+ELGLP+DFRDSIL KYS +FRLVDLE
Sbjct: 77  VRECEVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLE 136

Query: 198 VVALVGWDDE-LGTAQVEKWREKEYTEKWLSEFETKFAFPINFPTGFKIERGFREKLKNW 256
            + LV  DDE L  A+VE+WRE EY EKWLS+FET +AFPI+ PTGFKIE+GFRE+LKNW
Sbjct: 137 TLELVDRDDESLCVAKVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREELKNW 196

Query: 257 QRLPYTKPYERKEGIRVRTCGGVQRYEKRAVAVLHELLSLTVEKMVEVDQLAHFRRDFAI 316
           QR+PY KPY+RKE  R     G++R+EKR VAV+HELLSLTVEKMVEV++LAHFR+D  I
Sbjct: 197 QRVPYVKPYDRKEISR-----GLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGI 251

Query: 317 EVNVRELLLTHPGIFYISTKGKAQTVFLREAYSKGGLVEPNPVYTARRNMLDLILLGRRK 376
           EVNVRE++L HPGIFY+STKG +QT+FLREAYSKG L+EPNP+Y  RR MLDL+LL  R 
Sbjct: 252 EVNVREVILKHPGIFYVSTKGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTRY 311

Query: 377 TKQFLDCDSKSKEES---NAVVYELDDEGVQRQGDWVIPFL 414
           ++  L  + ++  E    + ++   +D    R GDWV+P L
Sbjct: 312 SRMLLQREDETHREEKSRDVLISSNEDWEGGRDGDWVLPIL 352


>AT1G06440.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr1:1963733-1964905 REVERSE LENGTH=390
          Length = 390

 Score =  265 bits (676), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 150/352 (42%), Positives = 215/352 (61%), Gaps = 13/352 (3%)

Query: 34  TISAQTRLEDRVRDPHLDNFMTHLKKLYLVLGFHNL-MSNRKRGP-FVSLQLMSRWRNIL 91
           T SAQ  +  R RDP  +  M   K L  V+   +L ++N    P  +S++ +SR    L
Sbjct: 25  TTSAQY-VASRSRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLSRLSQKL 83

Query: 92  GLNVTVGSFLHKYPHVFEVFAHPFRRNPCCRFTRKMKELILLERVVVKELEMEAVKRVKK 151
            LN    SFL KYPH+F V   P +  P CR T    E+   E + +       V R+ +
Sbjct: 84  HLNRGAASFLRKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVVDRLVR 143

Query: 152 LLMMSVNGTLRVHALRLMRRELGLPQDFRDSILGKYSGDFRLVD-----LEVVALVGWDD 206
           LL MS++ ++ + A+  + RELGLP DF DS++ K    F+L D       ++ LV  ++
Sbjct: 144 LLSMSISKSIPLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILELVQEEE 203

Query: 207 EL--GTAQVEKWREKEYTEKWLS--EFETKFAFPINFPTGFKIERGFREKLKNWQRLPYT 262
           +     A VEKWR  E +++  S    E +F+F  ++P G ++ + F+ K+K WQRLPY 
Sbjct: 204 KRLEFEAAVEKWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQRLPYV 263

Query: 263 KPYERKEGIRVRTCGGVQRYEKRAVAVLHELLSLTVEKMVEVDQLAHFRRDFAIEVNVRE 322
            PYE   G + ++  GV   EKRAVA+ HE L+LTVEKMVEV++++HFR+ F I++N+R+
Sbjct: 264 GPYEDMVG-KKKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLNIRD 322

Query: 323 LLLTHPGIFYISTKGKAQTVFLREAYSKGGLVEPNPVYTARRNMLDLILLGR 374
           L L HPG+FY+STKGK  TVFLREAY +G L++PNPVY ARR +LDL+LLGR
Sbjct: 323 LFLDHPGMFYVSTKGKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLGR 374


>AT4G33495.1 | Symbols: RPD1 | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr4:16111349-16112578 REVERSE
           LENGTH=409
          Length = 409

 Score =  263 bits (672), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/348 (43%), Positives = 211/348 (60%), Gaps = 12/348 (3%)

Query: 42  EDRVRDPHLDNFMTHLKKLYLVLGFHNLMSNRKRGPFVSLQLMSRWRNILGLNVT---VG 98
           +DRVRD   DN+M   KK+  V+ FH+L+ ++     +++ L+      LGL       G
Sbjct: 44  QDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHT-IAISLLDTLARRLGLGFKQHEPG 102

Query: 99  SFLHKYPHVFEVFAHPFRRNPCCRFTRKMKELILLERVVVKELEMEAVKRVKKLLMMSVN 158
           +FL K+PHVFE++ HP +R   CR TRK  + I  E   V +   +AV R++KL+MMS  
Sbjct: 103 AFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNT 162

Query: 159 GTLRVHALRLMRRELGLPQDFRDSILGKYSGDFRLVDLE-----VVALVGWDDELGTAQV 213
           G +R+  +R+ R E GLP+DF  S++ K+   FRL+D E      + +V  D  L    +
Sbjct: 163 GRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPNLSICAI 222

Query: 214 EKWREKEYTEKWLSEFETKFAFPINFPTGFKIERGFREKLKNWQRLPYTKPYERKEGIRV 273
           E+ RE EY  K +   + +F+F +NFP GFKI + FR  +  WQRLPY  PYE   G  +
Sbjct: 223 ERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISGYDL 282

Query: 274 RTCGGVQRYEKRAVAVLHELLSLTVEKMVEVDQLAHFRRDFAIEVNVRELLLTHPGIFYI 333
           R+     R EKR+VA +HELLSLTVEK + ++++AHFR    +   ++E LL H GIFYI
Sbjct: 283 RSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQGIFYI 342

Query: 334 STK---GKAQTVFLREAYSKGGLVEPNPVYTARRNMLDLILLGRRKTK 378
           ST+   GK  TVFLRE Y +G LVEPN VY ARR + +L+L+  RK K
Sbjct: 343 STRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAK 390


>AT5G48040.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr5:19470461-19471729 FORWARD
           LENGTH=422
          Length = 422

 Score =  165 bits (417), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 117/346 (33%), Positives = 180/346 (52%), Gaps = 29/346 (8%)

Query: 45  VRDPHLDNFMTHLKKLYLVLGFHNLMSNRKRGPFVSLQLMSRWRNILGL--NVTVGSFLH 102
           V+D  LD  +   K L  V    +++S          +L+   R  LGL   + + +F+ 
Sbjct: 40  VKDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPH-RGQLGLPQELKLSAFIR 98

Query: 103 KYPHVFEVFAHPFRRN-----PCCRFTRKMKELILLERVVVKELEMEAVKRVKKLLMMSV 157
           +YP++F    H +  +     PC   TR+  +L   E  V +  E + + R+ KLLM++ 
Sbjct: 99  RYPNIF--VEHCYWDSAGTSVPCFGLTRETIDLYYEEVDVSRVNERDVLVRLCKLLMLTC 156

Query: 158 NGTLRVHALRLMRRELGLPQDFRDSILGKYSGDFRLV----DLEVVALVGWDDELGTAQV 213
             TL +H++  +R +LGLP D+RDS++ K+   F LV    DL+ + L+ WD+ L  +Q+
Sbjct: 157 ERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSDLDGLKLIHWDEHLAVSQM 216

Query: 214 EKWREKEYTEKWLSEFETKFAFPINFPTGFKIERGFREKLKNWQRLPYTKPYERKEGIRV 273
           +  RE    ++       + AFP+ F  GF ++R   E L+ WQRLPYT PY     +  
Sbjct: 217 Q-LREDVGNDE-------RMAFPVKFTRGFGLKRKSIEWLQEWQRLPYTSPYVDASHLDP 268

Query: 274 RTCGGVQRYEKRAVAVLHELLSLTVEKMVEVDQLAHFRRDFAIEVNVRELLLTHPGIFYI 333
           RT       EKR V V HELL LT+ K  E   +++ R+ FA+     ++   HPGIFYI
Sbjct: 269 RT----DLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFTKVFERHPGIFYI 324

Query: 334 STKGKAQTVFLREAYSKGGLVEPNPVYTARR---NMLDLILLGRRK 376
           S K   QTV LREAY +  L+E +P+   R    NM++   L R +
Sbjct: 325 SMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANMMNEGFLDRSR 370


>AT3G58520.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr3:21643921-21645277 REVERSE
           LENGTH=418
          Length = 418

 Score =  164 bits (414), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 191/378 (50%), Gaps = 28/378 (7%)

Query: 13  QSTTISFSPFILFHQ-RRWKKPTISAQTRLEDRVRDPHLDNFM---THLKKLYLVLGFHN 68
           +S +  FS   LFHQ ++W+      + RL+  V++ +LD+ +   T LK   +      
Sbjct: 4   KSQSFLFSVSKLFHQHQQWRGMGAMTKVRLK-WVKNKNLDHVIDTETDLKAACI------ 56

Query: 69  LMSNRKRGP--FVSLQLMSRWRNILGLNVTVGSFLHKYPHVFEVFAHP-FRRNPCCRFTR 125
           L    KR P  F++ + ++ W+ +LGL V V  FL +YP +F  F H  +   PC + T 
Sbjct: 57  LKDAIKRSPTGFLTAKSVADWQKLLGLTVPVLRFLRRYPTLFHEFPHARYASLPCFKLTD 116

Query: 126 KMKELILLERVVVKELEMEAVKRVKKLLMMSVNGTLRVHALRLMRRELGLPQDFRDSILG 185
               L   E ++ +  E + V+R+ ++LMM  + T+ + +L  ++ +LGLP ++  +++ 
Sbjct: 117 TALMLDSQEEIIHQSHEADTVERLCRVLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVM 176

Query: 186 KYSGDFRLVDLE----VVALVGWDDELGTAQVEKWREKEYT---EKWLSEF---ETKFAF 235
           KY   F  V        + LV W DE   + ++K  E       E    EF   ++   F
Sbjct: 177 KYPDHFCFVKASNGNPCLKLVKWRDEFAFSALQKRNEDNDVSGEESRYREFKRGQSTLTF 236

Query: 236 PINFPTGFKIERGFREKLKNWQRLPYTKPYERKEGIRVRTCGGVQRYEKRAVAVLHELLS 295
           P++FP G+  ++  +  +  +Q+LPY  PY+    I   +       EKRAVAVLHELLS
Sbjct: 237 PMSFPRGYGAQKKVKAWMDEFQKLPYISPYDDPSNIDPES----DLMEKRAVAVLHELLS 292

Query: 296 LTVEKMVEVDQLAHFRRDFAIEVNVRELLLTHPGIFYISTKGKAQTVFLREAYSKGGLVE 355
           LT+ K  + + L   R +  I      L   +PGIFY+S K K  TV L+E Y +G LV+
Sbjct: 293 LTIHKKTKRNYLRSMRAELNIPHKFTRLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLVD 352

Query: 356 PNPVYTARRNMLDLILLG 373
           P+P+   R     ++  G
Sbjct: 353 PHPLTRLRDKFYHVMRTG 370


>AT4G01037.1 | Symbols: WTF1, AtWTF1 | Ubiquitin carboxyl-terminal
           hydrolase family protein | chr4:451444-453030 REVERSE
           LENGTH=528
          Length = 528

 Score =  147 bits (371), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 172/337 (51%), Gaps = 23/337 (6%)

Query: 51  DNFMTHLKKLYLVLGFHNLMSNRKRGPFVSLQLMSRWRNILGLNVT--VGSFLHKYPHVF 108
           D+ +   KKL LVL    ++ ++     +SL+ + ++R  LGL       + L KYP VF
Sbjct: 85  DSVVQRDKKLKLVLNIRKILVSQP-DRMMSLRGLGKYRRDLGLKKRRRFIALLRKYPGVF 143

Query: 109 EVF---AHPFRRNPCCRFTRKMKELILLERVVVKELEMEAVKRVKKLLMMSVNGTLRVHA 165
           E+    A+  R     + T + + L L E  +  ELE   V +++KL+MMS++  + +  
Sbjct: 144 EIVEEGAYSLR----FKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRILLEK 199

Query: 166 LRLMRRELGLPQDFRDSILGKYSGDFRLVDLE---VVALVGWDDELGTAQVE----KWRE 218
           +  ++ +LGLP +FRD+I  +Y   FR+V       + L  WD EL  +  E      R 
Sbjct: 200 ISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWDPELAVSAAELSEDDNRT 259

Query: 219 KEYTEKWLS-EFETKFAFPINFPTGFKIERGFREKLKNWQRLPYTKPYERKEGIRVRTCG 277
           +E  E+ L  +   KF   +  P G  + +    K+  ++ + Y  PY+    +R     
Sbjct: 260 RESEERNLIIDRPPKFNR-VKLPRGLNLSKSETRKISQFRDMQYISPYKDFSHLR----S 314

Query: 278 GVQRYEKRAVAVLHELLSLTVEKMVEVDQLAHFRRDFAIEVNVRELLLTHPGIFYISTKG 337
           G    EK A  V+HELLSLT EK   VD L HFR +F     +R +L+ HP +FY+S KG
Sbjct: 315 GTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVSLKG 374

Query: 338 KAQTVFLREAYSKGGLVEPNPVYTARRNMLDLILLGR 374
           +  +VFLREAY    L++ +P+   +  M  L+ + R
Sbjct: 375 ERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPR 411


>AT3G58520.2 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr3:21643921-21645277 REVERSE
           LENGTH=406
          Length = 406

 Score =  141 bits (355), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 172/373 (46%), Gaps = 30/373 (8%)

Query: 13  QSTTISFSPFILFHQ-RRWKKPTISAQTRLEDRVRDPHLDNFMTHLKKLYLVLGFHNLMS 71
           +S +  FS   LFHQ ++W+      + RL+  V++ +LD+ +     L       + + 
Sbjct: 4   KSQSFLFSVSKLFHQHQQWRGMGAMTKVRLK-WVKNKNLDHVIDTETDLKAACILKDAIK 62

Query: 72  NRKRGPFVSLQLMSRWRNILGLNVTVGSFLHKYPHVFEVFAHP-FRRNPCCRFTRKMKEL 130
               G  +       W               +YP +F  F H  +   PC + T     L
Sbjct: 63  RSPTGITIRENFNCYWNK-------------RYPTLFHEFPHARYASLPCFKLTDTALML 109

Query: 131 ILLERVVVKELEMEAVKRVKKLLMMSVNGTLRVHALRLMRRELGLPQDFRDSILGKYSGD 190
              E ++ +  E + V+R+ ++LMM  + T+ + +L  ++ +LGLP ++  +++ KY   
Sbjct: 110 DSQEEIIHQSHEADTVERLCRVLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDH 169

Query: 191 FRLVDLE----VVALVGWDDELGTAQVEKWREKEYTEKWLSEF------ETKFAFPINFP 240
           F  V        + LV W DE   + ++K  E        S +      ++   FP++FP
Sbjct: 170 FCFVKASNGNPCLKLVKWRDEFAFSALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSFP 229

Query: 241 TGFKIERGFREKLKNWQRLPYTKPYERKEGIRVRTCGGVQRYEKRAVAVLHELLSLTVEK 300
            G+  ++  +  +  +Q+LPY  PY+    I   +       EKRAVAVLHELLSLT+ K
Sbjct: 230 RGYGAQKKVKAWMDEFQKLPYISPYDDPSNIDPES----DLMEKRAVAVLHELLSLTIHK 285

Query: 301 MVEVDQLAHFRRDFAIEVNVRELLLTHPGIFYISTKGKAQTVFLREAYSKGGLVEPNPVY 360
             + + L   R +  I      L   +PGIFY+S K K  TV L+E Y +G LV+P+P+ 
Sbjct: 286 KTKRNYLRSMRAELNIPHKFTRLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLT 345

Query: 361 TARRNMLDLILLG 373
             R     ++  G
Sbjct: 346 RLRDKFYHVMRTG 358


>AT5G21970.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr5:7262071-7263420 FORWARD LENGTH=449
          Length = 449

 Score =  140 bits (352), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 173/346 (50%), Gaps = 23/346 (6%)

Query: 35  ISAQTRLEDRVRDPHLDNFMTHLKKLYLVLGFHNLMSNRK--RGPFVSLQLMSRWRNILG 92
           +++  R++DR R+  +       +K  +      LM   K  R   ++++   ++R  + 
Sbjct: 43  MTSSKRVQDRSREKRVQELEIATEKWKIASKVIFLMEVLKGERDMIMTVRSFEQYRRQIN 102

Query: 93  LNV--TVGSFLHKYPHVFEVFAHPFRRNPCCRFTRKMKELILLERVVVKELEMEAVKRVK 150
           L     +  F+ K P +FE++    R    C  T   ++L+     +++E   +A + V 
Sbjct: 103 LPKPHKISDFIRKSPKLFELYKDQ-RGVLWCGLTEGGEDLLDEHDKLLEENGDKAAEHVT 161

Query: 151 KLLMMSVNGTLRVHALRLMRRELGLPQDFRDSILGKYSGDFRLVDL----EVVALVGWDD 206
           + LMMSV+  L +  +   RR+ GLP DFR + +  +   F++V L    E + LV W+ 
Sbjct: 162 RCLMMSVDKKLPLDKIVHFRRDFGLPLDFRINWVYNFPQHFKVVKLGDGEEYLELVSWNP 221

Query: 207 ELGTAQVEK-----WREKEYTEKWLSEFETKFAFPINFPTGFKIERGFREKLKNWQRLPY 261
                ++EK       + E+    LS      AFP+ FP  +K    +R K++++Q+  Y
Sbjct: 222 AWAITELEKKTLGITEDCEHKPGMLS-----LAFPMKFPPSYKKMYRYRGKIEHFQKRSY 276

Query: 262 TKPYERKEGIRVRTCGGVQRYEKRAVAVLHELLSLTVEKMVEVDQLAHFRRDFAIEVNVR 321
             PY    G+      G + ++KRA+AV+HELLS T+EK +  D L HFRR+F +   + 
Sbjct: 277 LSPYADARGLE----AGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQKLM 332

Query: 322 ELLLTHPGIFYISTKGKAQTVFLREAYSKGGLVEPNPVYTARRNML 367
            + L H GIFY+S +GK  +VFL E Y    L+E  P+   +  +L
Sbjct: 333 RIFLKHCGIFYVSERGKRFSVFLTEGYEGPELIEKCPLILWKEKLL 378


>AT1G79120.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr1:29767314-29768555 REVERSE
           LENGTH=413
          Length = 413

 Score =  137 bits (345), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 163/330 (49%), Gaps = 23/330 (6%)

Query: 44  RVRDPHLDNFMTHLKKLYLVLGFHNLMSNRKRGPFVSLQLMSRWRNILGLNVTVGSFLHK 103
           RV D  LD  +   KK  L+L   +++  +K G  +   L      +   N+     + K
Sbjct: 64  RVHD--LDKAIDLNKKPSLILQLKSIIQAQKHGSLLLRDLEKHVGFVHKWNLMAA--IEK 119

Query: 104 YPHVFEVFAHPFRRNPCCRFTRKMKELILLERVVVKELEMEAVKRVKKLLMMSVNGTLRV 163
           YP +F V     +  P    T K K++   E    + +E   V  ++KLLMMSV+  + +
Sbjct: 120 YPTIFYV-GGGHKEPPFVMLTEKAKKIAAEESEATESMEPILVNNLRKLLMMSVDCRVPL 178

Query: 164 HALRLMRRELGLPQDFRDSILGKYSGDFRL--VDLEV-VALVGWDDELG-TAQVEKWREK 219
             +  ++  +GLPQDF+ +++ KY+  F L  ++ +V + L  WD  L  TA+ ++   +
Sbjct: 179 EKVEFIQSAMGLPQDFKSTLIPKYTEFFSLKVINGKVNLVLENWDSSLAITAREDRLSRE 238

Query: 220 EYTEKWL----------SEFETKFAFPINFPTGFKIERGFREKLKNWQRLPYTKPYERKE 269
            ++E               F  + AF I+FP GF+    + E+ + WQ++ +  PY    
Sbjct: 239 GFSESVGDRKRVRITKDGNFLGRNAFKISFPPGFRPNASYLEEFEKWQKMEFPSPYLNAR 298

Query: 270 GIRVRTCGGVQRYEKRAVAVLHELLSLTVEKMVEVDQLAHFRRDFAIEVNVRELLLTHPG 329
               R      +  KR VAVLHELLSLT+EK V   QL  F  ++ +   +   L+ H G
Sbjct: 299 ----RFDAADPKARKRVVAVLHELLSLTMEKRVTCAQLDAFHSEYLLPSRLILCLIKHQG 354

Query: 330 IFYISTKGKAQTVFLREAYSKGGLVEPNPV 359
           IFYI+ KG   TVFL++AY+   L+E  P+
Sbjct: 355 IFYITNKGARGTVFLKDAYAGSNLIEKCPL 384


>AT2G31290.2 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr2:13344151-13345398 FORWARD
           LENGTH=415
          Length = 415

 Score =  137 bits (344), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 160/340 (47%), Gaps = 37/340 (10%)

Query: 46  RDPHLDNFMTHLKKLYLVLGFHNLMSNRKRGPFVSLQLMSRWRNILGLNVTVGSFLHKYP 105
           +DP L++ ++  K+  +     N++  R      S++ + +    L L     ++L KYP
Sbjct: 30  KDPDLESALSRNKRWIVNSRLKNIIL-RCPNQVASIKFLQKKFKTLDLQGKALNWLKKYP 88

Query: 106 HVFEVFAHPFRRNPCCRFTRKMKELILLERVVVKELEMEAVKRVKKLLMMSVNGTLRVHA 165
             F V+         CR T+ M  L+  E +V    E     R+ KLLM+SVN  L V  
Sbjct: 89  CCFHVYLE--NDEYYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRLNVVK 146

Query: 166 LRLMRRELGLPQDFRDSILGKYSGDFRLVDLE------VVALVGWDDELGTAQVEKWREK 219
           L   +R  G P D+   I+ KYS  FRLV+         + L+ W  EL  + VE   +K
Sbjct: 147 LNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVSAVEAAAKK 206

Query: 220 EYTEKWLSEFETKFAFPINFPTGFKIERGFREKLKNWQRL------PYTKPYERKEGIRV 273
             +E          +F  + P+ +          K W+R       PY  PYE    +  
Sbjct: 207 CGSEP---------SFSCSLPSTWT---------KPWERFMEFNAFPYISPYEDHGDL-- 246

Query: 274 RTCGGVQRYEKRAVAVLHELLSLTVEKMVEVDQLAHFRRDFAIEVNVRELLLTHPGIFYI 333
               G +  EKR+V ++HELLSLT+ K + + +L+HF+R+F +   +  +LL HPGIFY+
Sbjct: 247 --VEGSKESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYV 304

Query: 334 STKGKAQTVFLREAYSKGGLVEPNPVYTARRNMLDLILLG 373
             K +  TV LRE Y+   L+  +P+   +    +L+  G
Sbjct: 305 GNKYQVHTVILREGYNGSELIHKDPLVVVKDKFGELMQQG 344


>AT2G31290.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr2:13344151-13345398 FORWARD
           LENGTH=415
          Length = 415

 Score =  137 bits (344), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 160/340 (47%), Gaps = 37/340 (10%)

Query: 46  RDPHLDNFMTHLKKLYLVLGFHNLMSNRKRGPFVSLQLMSRWRNILGLNVTVGSFLHKYP 105
           +DP L++ ++  K+  +     N++  R      S++ + +    L L     ++L KYP
Sbjct: 30  KDPDLESALSRNKRWIVNSRLKNIIL-RCPNQVASIKFLQKKFKTLDLQGKALNWLKKYP 88

Query: 106 HVFEVFAHPFRRNPCCRFTRKMKELILLERVVVKELEMEAVKRVKKLLMMSVNGTLRVHA 165
             F V+         CR T+ M  L+  E +V    E     R+ KLLM+SVN  L V  
Sbjct: 89  CCFHVYLE--NDEYYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRLNVVK 146

Query: 166 LRLMRRELGLPQDFRDSILGKYSGDFRLVDLE------VVALVGWDDELGTAQVEKWREK 219
           L   +R  G P D+   I+ KYS  FRLV+         + L+ W  EL  + VE   +K
Sbjct: 147 LNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVSAVEAAAKK 206

Query: 220 EYTEKWLSEFETKFAFPINFPTGFKIERGFREKLKNWQRL------PYTKPYERKEGIRV 273
             +E          +F  + P+ +          K W+R       PY  PYE    +  
Sbjct: 207 CGSEP---------SFSCSLPSTWT---------KPWERFMEFNAFPYISPYEDHGDL-- 246

Query: 274 RTCGGVQRYEKRAVAVLHELLSLTVEKMVEVDQLAHFRRDFAIEVNVRELLLTHPGIFYI 333
               G +  EKR+V ++HELLSLT+ K + + +L+HF+R+F +   +  +LL HPGIFY+
Sbjct: 247 --VEGSKESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYV 304

Query: 334 STKGKAQTVFLREAYSKGGLVEPNPVYTARRNMLDLILLG 373
             K +  TV LRE Y+   L+  +P+   +    +L+  G
Sbjct: 305 GNKYQVHTVILREGYNGSELIHKDPLVVVKDKFGELMQQG 344


>AT1G71850.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr1:27024875-27026287 REVERSE
           LENGTH=470
          Length = 470

 Score =  135 bits (341), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 192/391 (49%), Gaps = 29/391 (7%)

Query: 34  TISAQTRLEDR---VRDPHLDNFMTHLKKLYLVLGFHNLMSNRKRGPFVSLQLMSRWRNI 90
           T +  + +ED    VRD  LD+ +   K L  +L   +L+ +      V + +++  ++ 
Sbjct: 18  TFADTSAVEDTYKFVRDRGLDHAVEREKNLRPLLSIKDLIRSEP-AKSVPISVITSQKDS 76

Query: 91  LGLNVTVGSFLHKYPHVFEVF-AHPFRRNPCCRFTRKMKELILLERVV--VKELEMEAVK 147
           L + +    F+  +P VF+ F       +P    T ++      E++V   +  +     
Sbjct: 77  LRVPLRPIEFIRSFPSVFQEFLPGGIGIHPHISLTPEILNHDADEQLVYGSETYKQGLAD 136

Query: 148 RVKKLLMMSVNGTLRVHALRLMRRELGLPQDFRDSILGKYSGDFRLVDLEV------VAL 201
           R+ KLLM++    + +  L L++ +LGLP+D+ ++++ ++   FR++  ++      + L
Sbjct: 137 RLLKLLMINRINKIPLEILDLLKWDLGLPKDYVETMVPEFPDYFRVIKSKLRGCSGELEL 196

Query: 202 VGWDDELGTAQVEK----WREKEYTEKWLSEFETKFAFPINFPTGFKIERGFREKLKNWQ 257
           V W +E   + +EK     R+ EYT+       +  AFP+ F  GF +++  ++ + +WQ
Sbjct: 197 VCWSNEHAVSVLEKKARTLRKGEYTKG------SAIAFPMKFSNGFVVDKKMKKWIDDWQ 250

Query: 258 RLPYTKPYERKEGIRVRTCGGVQRYEKRAVAVLHELLSLTVEKMVEVDQLAHFRRDFAIE 317
           +LPY  PYE      +         +K A AVLHE+++L V K VE D + H      + 
Sbjct: 251 KLPYISPYENA----LHLSATSDESDKWAAAVLHEIMNLFVSKKVEKDAILHLGEFMGLR 306

Query: 318 VNVRELLLTHPGIFYISTKGKAQTVFLREAYSKGGLVEPNPVYTARRNMLDLILLGRRKT 377
              + +L  HPGIFY+S+K +  TV LR+ Y +G L+E N + T+R   + L+   ++  
Sbjct: 307 SRFKRVLHNHPGIFYLSSKLRTHTVVLRDGYKRGMLIESNELVTSRNRYMKLMNTVKKDN 366

Query: 378 KQFLDCDSKSKEESNAVVYELDDEGVQRQGD 408
           K      S  KE+   V  E+ D   + + D
Sbjct: 367 KAV--SSSSKKEDKGKVEGEVCDTDAKAEND 395


>AT4G24320.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr4:12602298-12603485 REVERSE
           LENGTH=395
          Length = 395

 Score =  127 bits (319), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 157/323 (48%), Gaps = 32/323 (9%)

Query: 91  LGLNVTVGSFLHKYPHVFEVF----AHPF--RRNPCCRFTRKMKELILL---ERVVVKEL 141
           + L++T  +F  KYP VF  F    +HP   R  P      K +E I L   +R V    
Sbjct: 71  VNLHITAAAFFQKYPSVFTTFQPSPSHPLHVRLTPQALTLHKEEETIHLSPPQRNVT--- 127

Query: 142 EMEAVKRVKKLLMMSVNGTLRVHALRLMRRELGLPQDFRDSILGKYSGDFRLVDLE---- 197
               V+R+ K LM++  G+L ++ L   R +LGLP+D+  S++G Y   F + +++    
Sbjct: 128 ----VQRLTKFLMLTGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKDRLT 183

Query: 198 -----VVALVGWDDELGTAQVEKWREKEYTEKWLSEFETKFAFPINFPTGFKIERGFREK 252
                 + +    + L  +++E+ RE       + +   +  + +NFP G+++ +  +  
Sbjct: 184 GEKTLALTISSRRNNLPVSEMER-REATIDGSRVKK-GLRIRYSMNFPKGYELHKRVKNW 241

Query: 253 LKNWQRLPYTKPYERKEGIRVRTCGGVQRYEKRAVAVLHELLSLTVEKMVEVDQLAHFRR 312
           ++ WQ LPY  PYE              + EK AVAVLHELL L V K  E D +     
Sbjct: 242 VEQWQNLPYISPYENA----FHLGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGE 297

Query: 313 DFAIEVNVRELLLTHPGIFYISTKGKAQTVFLREAYSKGGLVEPNPVYTARRNMLDLIL- 371
                +  ++ L+ HPGIFY+S K + QTV LREAY K  L+E +P+   R   + L+  
Sbjct: 298 YLGFGMRFKKALVHHPGIFYMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMSK 357

Query: 372 LGRRKTKQFLDCDSKSKEESNAV 394
            GR K + ++    +S  +   +
Sbjct: 358 SGRGKKRDYVHGVERSNRKKRVI 380


>AT2G39120.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr2:16321794-16322957 FORWARD
           LENGTH=387
          Length = 387

 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 159/352 (45%), Gaps = 26/352 (7%)

Query: 46  RDPHLDNFMTHLK--KLYLVLGFHNLMSNRKRGPFVSLQLMSRWRNILGLNVTVGSFLHK 103
           RDP+ DN    L+  +L  V+   N +  ++    + +  +S+      ++  +  FL K
Sbjct: 33  RDPYFDNIEHILRSSQLKSVVSLKNCIV-QEPNRCIPISAISKKTRQFDVSTKIAHFLRK 91

Query: 104 YPHVFEVFAHPFRRNPCCRFTRKMKELILLERVVVKELEMEAVKRVKKLLMMSVNGTLRV 163
           +P +FE F  P    P  R T +  EL   ERVV +    +   R+KKL++MS +  L +
Sbjct: 92  FPSIFEEFVGPEYNLPWFRLTPEATELDRQERVVYQTSADDLRDRLKKLILMSKDNVLPL 151

Query: 164 HALRLMRRELGLPQDFRDSILGKYSGDFRLVDLE------VVALVGWDDELGTAQVEKWR 217
             ++ M+  LGLP D+           FR VD+E       V   G D  L   Q    +
Sbjct: 152 SIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGGDKVLSVLQKNAMK 211

Query: 218 EKEYTEKWLSEFETKFAFPINFPT-GFKIERGFREKLKNWQRLPYTKPYERKEGIRVRTC 276
            K   E  L E E    FP+ FP+ G ++     + L  +Q+LPY  PY+    +   + 
Sbjct: 212 -KRRGEVSLEEIE----FPL-FPSKGCRLRVKIEDWLMEFQKLPYVSPYDDYSCLDPSS- 264

Query: 277 GGVQRYEKRAVAVLHELLSLTVEKMVEVDQLAHFRRDFAIEVNVRELLLTHPGIFYISTK 336
                 EKR V  LHELL L VE   E  +L   ++ F +   V +    HP IFY+S K
Sbjct: 265 ---DIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIFYLSMK 321

Query: 337 GKAQTVFLREAYSKGGLVEPNPVYTARRNML------DLILLGRRKTKQFLD 382
            K  T  LRE Y     VE +PV   R+  +      +LIL  RR +  F D
Sbjct: 322 NKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNSELILKSRRNSFGFRD 373


>AT5G62990.1 | Symbols: emb1692 | Ubiquitin carboxyl-terminal
           hydrolase family protein | chr5:25277828-25279312
           FORWARD LENGTH=494
          Length = 494

 Score =  125 bits (315), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 162/342 (47%), Gaps = 25/342 (7%)

Query: 45  VRDPHLDNFMTHLKKLYLVLGFHNLMSNRKRGPFVSLQLMSRWRNILGLN--VTVGSFLH 102
           VR P LD  +    ++  V   + L+ ++ +  ++ ++++ + R+ L +   + + S + 
Sbjct: 60  VRSPSLDRHVVKQNRVRFVQKLNTLLLSKPKH-YIPIEILYKCRSYLCIENPLAILSMIR 118

Query: 103 KYPHVFEVFAHPFRRNP----------CCRFTRKMKELILLERVVVKELEMEAVKRVKKL 152
           +YP +FE+F  P    P          C R T     L + E  +  E+  +   +++KL
Sbjct: 119 RYPTIFELFTTPTPHLPMNATKPLSQLCVRLTSAASSLAMQELNLKSEISDKLATKLQKL 178

Query: 153 LMMSVNGTLRVHALRLMRRELGLPQDFRDSILGKYSGDFRLVDLE---VVALVGWDDELG 209
           LM+S +  L +  L  +  + G P +FR  +   Y   F+ VD      + LV  D EL 
Sbjct: 179 LMLSSHRRLLLSKLVHIAPDFGFPPNFRSRLCNDYPDKFKTVDTSYGRALELVSSDPELA 238

Query: 210 TAQVEKWREKEYTEKWLSEFETKFAFPINFPTGFKIERGFREKLKNWQRLPYTKPYERKE 269
                +    E     + +   KF   +N   G  ++R  +  L  ++  P   PY+   
Sbjct: 239 N----QMPSPEVDRGLIVDRPLKFKR-LNLRRGLNLKRRHQGFLIKFRESPDVCPYKMSS 293

Query: 270 GIRVRTCGGVQRYEKRAVAVLHELLSLTVEKMVEVDQLAHFRRDFAIEVNVRELLLTHPG 329
                        EKRA AV+ E+L LTVEK   +D L HFR++F++   +R+L++ HP 
Sbjct: 294 DY---LASESIEAEKRACAVVREVLGLTVEKRTLIDHLTHFRKEFSLPNKLRDLIVRHPE 350

Query: 330 IFYISTKGKAQTVFLREAYSKGG-LVEPNPVYTARRNMLDLI 370
           +FY+S KG   +VFL EAY+  G L++ +     R  ++DLI
Sbjct: 351 LFYVSIKGMRDSVFLVEAYNDNGDLLDKDERLVIRERLIDLI 392


>AT3G63090.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr3:23313617-23314831 FORWARD
           LENGTH=404
          Length = 404

 Score =  118 bits (295), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 147/315 (46%), Gaps = 16/315 (5%)

Query: 76  GPFVSLQLMSRWRNILGLNVTVGSFLHKYPHVFEVFAHPFR--RNPC--CRFTRKMKELI 131
           G  + L+ + + R  L L     SF+   P +FE++    +   +P    R T +++  +
Sbjct: 69  GQVIPLRYLEKRRERLRLTFKAKSFVEMNPSLFEIYYDRIKPKSDPVQFLRPTPRLRAFL 128

Query: 132 LLERVVVKELEMEAVKRVKKLLMMSVNGTLRVHALRLMRRELGLPQDFRDSILGKYSGDF 191
             E+ +  E E   V ++ +LLMM+ +  +    L  ++R+ G P DF   ++ KY   F
Sbjct: 129 DEEQRIYSENEPLLVSKLCQLLMMAKDKVISADKLVHVKRDFGFPNDFLMKLVQKYPNYF 188

Query: 192 RLVDL-----EVVALVGWDDELGTAQVEKWREKEYTEKWLSEFETKFAFPINFPTGFKIE 246
           RL  L       + LV W+ +   +++E   E E  +   +    +  + +  P+GF + 
Sbjct: 189 RLTGLPEEGKSFLELVSWNPDFAKSKIELRAEDETLK---TGVRIRPNYNVKLPSGFFLR 245

Query: 247 RGFREKLKNWQRLPYTKPYERKEGIRVRTCGGVQRYEKRAVAVLHELLSLTVEKMVEVDQ 306
           +  RE  ++W    Y  PYE    +        +  EKR V V+HELLSL++ K V V  
Sbjct: 246 KEMREWTRDWLEQDYISPYEDVSHLD----QASKEMEKRTVGVVHELLSLSLLKRVPVPT 301

Query: 307 LAHFRRDFAIEVNVRELLLTHPGIFYISTKGKAQTVFLREAYSKGGLVEPNPVYTARRNM 366
           L  F  +F        +   H GIFY+S KG  +T  LREAY    LV+ +P+   +   
Sbjct: 302 LGKFCDEFRFSNAFSSVFTRHSGIFYLSLKGGIKTAVLREAYKDDELVDRDPLLAIKDKF 361

Query: 367 LDLILLGRRKTKQFL 381
           L L+  G ++ K  L
Sbjct: 362 LRLLEEGWQERKDRL 376


>AT4G08940.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr4:5730986-5732173 REVERSE LENGTH=395
          Length = 395

 Score = 99.8 bits (247), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 130/269 (48%), Gaps = 20/269 (7%)

Query: 97  VGSFLHKYPHVFEVFAHPFRRNPCCRFTRKMKELILLERVVVKELEMEAVKRVKKLLMMS 156
           V  F+ K+P +F+ + H         FT  M++L+  E+ +++ +E++ V  V+KLLMM+
Sbjct: 119 VTKFIPKHPLIFQTYRHS-DGKIWLGFTEFMEDLLDEEKGLMESMELDRVNCVRKLLMMT 177

Query: 157 VNGTLRVHALRLMRRELGLPQDFRDSILGKYSGDFRLVD----LEVVALVGWDDELGTAQ 212
            +  + +  +   R   G+P+DFRD +  KY   FR+V       V+ LV WD  L  ++
Sbjct: 178 KDKRILLSKIHHTRLLFGIPEDFRDRV-AKYPDYFRVVTGGDGNRVLELVNWDTNLAVSE 236

Query: 213 VEKWREKEYTEKWLSEFETK--FAFPINFPTGFKIERGFREKLKNWQRLPYTKPYERKEG 270
           +E+          + E + K  F FP+      ++E     KL      P   PY     
Sbjct: 237 LERLF-------MIDEDKAKRVFKFPVKHGKELELEEKDTRKLNLLNTFPLVSPYSDGWK 289

Query: 271 IRVRTCGGVQRYEKRAVAVLHELLSLTVEKMVEVDQLAHFRRDFAIEVNVRELLLTHPGI 330
           + V +       EK  V ++HE L+LT+EK   +  +  F+ +F++     ++L      
Sbjct: 290 LDVWSLEA----EKYRVGIVHEFLNLTLEKRASIHHIVEFKDEFSLTRQTYQMLKKQSMS 345

Query: 331 FYISTKGKAQTVFLREAYSKGG-LVEPNP 358
           FY++      TVFL++AY + G LV  +P
Sbjct: 346 FYLAGTEMNWTVFLKDAYDENGVLVSKDP 374