Miyakogusa Predicted Gene
- Lj1g3v4079400.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4079400.1 tr|G7L4S9|G7L4S9_MEDTR RING finger protein
OS=Medicago truncatula GN=MTR_7g088560 PE=4 SV=1,72.5,0.000006,Ring
finger,Zinc finger, RING-type; ZF_RING_2,Zinc finger, RING-type;
RING/U-box,NULL; INTEGRATOR CO,CUFF.31830.1
(304 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 260 9e-70
AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogene... 242 2e-64
AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 233 1e-61
AT3G61180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 229 2e-60
AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 217 7e-57
AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 217 9e-57
AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 194 5e-50
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 116 2e-26
AT4G32600.1 | Symbols: | RING/U-box superfamily protein | chr4:... 113 1e-25
AT4G26580.2 | Symbols: | RING/U-box superfamily protein | chr4:... 103 1e-22
AT4G26580.1 | Symbols: | RING/U-box superfamily protein | chr4:... 103 1e-22
AT5G55970.2 | Symbols: | RING/U-box superfamily protein | chr5:... 102 3e-22
AT5G55970.1 | Symbols: | RING/U-box superfamily protein | chr5:... 102 3e-22
AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein | ... 64 9e-11
AT5G24870.2 | Symbols: | RING/U-box superfamily protein | chr5:... 60 2e-09
AT5G24870.1 | Symbols: | RING/U-box superfamily protein | chr5:... 60 2e-09
AT5G10650.2 | Symbols: | RING/U-box superfamily protein | chr5:... 60 2e-09
AT5G10650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 60 2e-09
AT5G42940.1 | Symbols: | RING/U-box superfamily protein | chr5:... 59 3e-09
AT5G52140.1 | Symbols: | RING/U-box superfamily protein | chr5:... 56 2e-08
AT4G09130.1 | Symbols: | RING/U-box superfamily protein | chr4:... 56 3e-08
AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:1771336... 56 4e-08
AT2G15530.3 | Symbols: | RING/U-box superfamily protein | chr2:... 56 4e-08
AT2G15530.2 | Symbols: | RING/U-box superfamily protein | chr2:... 56 4e-08
AT2G15530.1 | Symbols: | RING/U-box superfamily protein | chr2:... 56 4e-08
AT1G22500.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 4e-08
AT5G60820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 5e-08
AT3G58720.1 | Symbols: | RING/U-box superfamily protein | chr3:... 55 6e-08
AT1G23980.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 7e-08
AT1G49220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 7e-08
AT2G15530.4 | Symbols: | RING/U-box superfamily protein | chr2:... 55 7e-08
AT4G34040.1 | Symbols: | RING/U-box superfamily protein | chr4:... 55 8e-08
AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A | chr2:7576640... 55 9e-08
AT4G09110.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 1e-07
AT3G58720.2 | Symbols: | RING/U-box superfamily protein | chr3:... 54 1e-07
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 54 1e-07
AT4G31450.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 1e-07
AT2G20030.1 | Symbols: | RING/U-box superfamily protein | chr2:... 54 1e-07
AT2G35000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 54 1e-07
AT1G26800.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 2e-07
AT4G09120.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 2e-07
AT1G14200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 2e-07
AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein | c... 53 2e-07
AT5G07040.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 2e-07
AT5G40250.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 2e-07
AT1G72200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 2e-07
AT2G34990.1 | Symbols: | RING/U-box superfamily protein | chr2:... 53 2e-07
AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |... 53 2e-07
AT3G19910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 53 3e-07
AT1G55530.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 3e-07
AT1G20823.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 3e-07
AT5G45290.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 3e-07
AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 52 4e-07
AT5G45290.2 | Symbols: | RING/U-box superfamily protein | chr5:... 52 4e-07
AT1G60360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 4e-07
AT1G53820.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 6e-07
AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein | ... 52 7e-07
AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 52 7e-07
AT1G33480.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 7e-07
AT4G26400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 7e-07
AT4G26400.2 | Symbols: | RING/U-box superfamily protein | chr4:... 52 7e-07
AT1G49850.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 7e-07
AT1G74620.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 7e-07
AT5G17600.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 7e-07
AT3G10910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 52 7e-07
AT2G29840.1 | Symbols: | RING/U-box superfamily protein | chr2:... 52 7e-07
AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 51 8e-07
AT4G28890.1 | Symbols: | RING/U-box superfamily protein | chr4:... 51 8e-07
AT1G49210.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 8e-07
AT4G10150.1 | Symbols: | RING/U-box superfamily protein | chr4:... 51 8e-07
AT4G12190.1 | Symbols: | RING/U-box superfamily protein | chr4:... 51 9e-07
AT3G13430.3 | Symbols: | RING/U-box superfamily protein | chr3:... 51 9e-07
AT3G13430.2 | Symbols: | RING/U-box superfamily protein | chr3:... 51 9e-07
AT3G13430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 51 9e-07
AT3G60080.1 | Symbols: | RING/U-box superfamily protein | chr3:... 51 1e-06
AT5G08139.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 1e-06
AT5G57750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 1e-06
AT1G45180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 1e-06
AT1G35330.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 1e-06
AT1G70910.1 | Symbols: DEP | RING/U-box superfamily protein | ch... 51 1e-06
AT1G49200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 1e-06
AT3G30460.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 1e-06
AT1G21960.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 1e-06
AT2G27940.1 | Symbols: | RING/U-box superfamily protein | chr2:... 50 2e-06
AT4G10160.1 | Symbols: | RING/U-box superfamily protein | chr4:... 50 2e-06
AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein | c... 50 2e-06
AT4G05350.1 | Symbols: | RING/U-box superfamily protein | chr4:... 50 2e-06
AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein | c... 50 2e-06
AT5G53910.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 2e-06
AT2G46160.1 | Symbols: | RING/U-box superfamily protein | chr2:... 50 2e-06
AT5G52150.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 2e-06
AT3G18773.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 2e-06
AT5G07225.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 2e-06
AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive... 50 3e-06
AT1G49230.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 3e-06
AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B | chr4:1685223... 49 3e-06
AT4G40070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 4e-06
AT5G02750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 4e-06
AT5G01880.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 4e-06
AT4G33565.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 5e-06
AT1G18770.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 5e-06
AT5G05280.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 5e-06
AT3G02340.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 6e-06
AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein | ... 49 6e-06
AT5G66070.2 | Symbols: | RING/U-box superfamily protein | chr5:... 49 6e-06
AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zi... 49 6e-06
AT5G53110.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 6e-06
AT1G04360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 6e-06
AT5G66070.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 6e-06
AT5G15820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 7e-06
AT5G54990.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 7e-06
AT5G43420.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 8e-06
AT4G30400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 48 8e-06
AT5G67120.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 8e-06
AT2G15580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 48 8e-06
AT1G04790.1 | Symbols: | RING/U-box superfamily protein | chr1:... 48 9e-06
AT2G37580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 48 9e-06
AT2G44330.1 | Symbols: | RING/U-box superfamily protein | chr2:... 48 9e-06
AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 48 1e-05
AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 48 1e-05
AT3G15740.1 | Symbols: | RING/U-box superfamily protein | chr3:... 48 1e-05
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 260 bits (664), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 129/280 (46%), Positives = 177/280 (63%), Gaps = 20/280 (7%)
Query: 40 AYSRAVRVVDIVWNLAFVVPAAGVLLFTLHERPSTPLRLWLCGYAFECLLHMAFVYSEYR 99
YS+ V +D++WN AFV+ A +LL E+P+ P+R+W+CGYA +CL+H+ V+ E+R
Sbjct: 63 GYSKPVVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVLVWLEFR 122
Query: 100 SSTAL-----------------DSFSRTPYSILKKLEPMNTLTSSVWWVFGFYWIVVGGQ 142
A D + + K E MNT+ S VWW+ GFYW+V GG
Sbjct: 123 KRNARSRPGDLEAAQATNQDSEDEDNDERFLSTKTCESMNTIISFVWWIVGFYWLVSGGD 182
Query: 143 ALVEDSPRLYWLTVVFLAFDVFFIIFCIGMACVVFFALFCILP-IIALAYAIRIREGASE 201
L++++ LYWLT VFLAFDVFF IFC+ +AC++ AL C LP IIAL YA+ +EGASE
Sbjct: 183 ILLQNATHLYWLTFVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIALLYAVAGQEGASE 242
Query: 202 EDIRSLPKYRFSQSNSLLMVHDNKKQLINARNDSCNESHTSEIFLDPDDSECCICLCTYV 261
D+ LPKYRF N+ D ++I D+ +E+ +E L P+D++CCICL +Y
Sbjct: 243 ADLSILPKYRFHTMNNDEKQSDGGGKMIPV--DAASENLGNERVLLPEDADCCICLSSYE 300
Query: 262 DGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNLLRAD 301
DG EL LPC HHFHS CI +WL+ ATCPLCKFN+L+ +
Sbjct: 301 DGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFNILKGN 340
>AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogenesis
| chr2:324499-325895 FORWARD LENGTH=359
Length = 359
Score = 242 bits (618), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/294 (42%), Positives = 177/294 (60%), Gaps = 40/294 (13%)
Query: 40 AYSRAVRVVDIVWNLAFVVPAAGVLLFTLHERPSTPLRLWLCGYAFECLLHMAFVYSEY- 98
YS+ V DI+WN A V+ +A +L+ T+ ERP+ P+R+W+C Y +CL H+ V+SEY
Sbjct: 72 GYSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYW 131
Query: 99 -----RSSTALDSF-----------------SRTPYSILKKLEPMNTLTSSVWWVFGFYW 136
R + L+S+ + T YS +K+ E +NT+ S +WW+ GFYW
Sbjct: 132 RRNSTRRARDLESYDHEDYNIEYDYEQDSDDNSTTYSFVKRCESINTVISFIWWIIGFYW 191
Query: 137 IVVGGQALVEDSPRLYWLTVVFLAFDVFFIIFCIGMACVVFFALFCILP-IIALAYAIRI 195
+V GG L+ ++P LYWL+V+FLA DVFF +FC+ +AC+V AL C LP IIAL YA+
Sbjct: 192 VVEGGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCIIALLYAVAG 251
Query: 196 REGASEEDIRSLPKYRFSQSNSLLMVHDNKKQLINAR-------NDSCNESHTSEIFLDP 248
EG SE ++ LP Y+F H N+K + N C +E L
Sbjct: 252 TEGVSEAELGVLPLYKFKA------FHSNEKNITGPGKMVPIPINGLC---LATERTLLA 302
Query: 249 DDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNLLRADT 302
+D++CCICL +Y DG EL+ LPC HHFHS CI +WL+ +ATCPLCK+N+L+ T
Sbjct: 303 EDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNILKGTT 356
>AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr4:7053737-7055516 REVERSE LENGTH=390
Length = 390
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/285 (44%), Positives = 172/285 (60%), Gaps = 29/285 (10%)
Query: 40 AYSRAVRVVDIVWNLAFVVPAAGVLLFTLHERPSTPLRLWLCGYAFECLLHMAFVYSEYR 99
AYS+ V +DI+WNLAFV VL+ + E+P+ PLR+W+ GY +C LHMA V EYR
Sbjct: 104 AYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYR 163
Query: 100 -----------SSTALDSFSRTPYSIL-------------KKLEPMNTLTSSVWWVFGFY 135
+ L + S Y L K LE NT+ S +WW+ GFY
Sbjct: 164 RRRRRRHPEDGGGSGLTNSSSQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGFY 223
Query: 136 WIVVGGQALVEDSPRLYWLTVVFLAFDVFFIIFCIGMACVVFFALFCILP-IIALAYAIR 194
W+ GGQ L DSP+LYWL ++FL FDVFF++FC+ +ACV+ A+ C LP IIA+ YA+
Sbjct: 224 WVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAILYAVA 283
Query: 195 IREGASEEDIRSLPKYRFSQSNSLLMVHDNKKQLINARNDSCNESHTSEIFLDPDDSECC 254
+EGAS+ DI +PK+RF+++ ++ + + ++ C E L P+D+ECC
Sbjct: 284 DQEGASKNDIDQMPKFRFTKTGNVEKLSGKARGIMT----ECGTDSPIERSLSPEDAECC 339
Query: 255 ICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNLLR 299
ICLC Y DGVEL LPC HHFH CI +WL + CPLCKFN+L+
Sbjct: 340 ICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNILK 384
>AT3G61180.1 | Symbols: | RING/U-box superfamily protein |
chr3:22645680-22647290 FORWARD LENGTH=379
Length = 379
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 167/291 (57%), Gaps = 31/291 (10%)
Query: 40 AYSRAVRVVDIVWNLAFVVPAAGVLLFTLHERPSTPLRLWLCGYAFECLLHMAFVYSEYR 99
AYS+ + V+DI+WN FV+ + +L F+ E P PLRLW+ GY +CL H+ V +EY+
Sbjct: 79 AYSKPIIVLDILWNFLFVIVSIAILGFSSDEDPDVPLRLWIIGYNVQCLFHVGCVIAEYK 138
Query: 100 -------------SSTALDSFSRTP-----YSI------------LKKLEPMNTLTSSVW 129
S+ +S S + YSI K LE NT+ S VW
Sbjct: 139 RRRVANSPPPSGEDSSNHESLSGSEDESDGYSINNTDDDDHGTSFTKHLESANTMFSFVW 198
Query: 130 WVFGFYWIVVGGQALVEDSPRLYWLTVVFLAFDVFFIIFCIGMACVVFFALFCILP-IIA 188
W+ GFYW+ +AL + SP+LYWL V FLAFDV F++ C+ +A ++ A+ C LP IIA
Sbjct: 199 WIIGFYWVTADTEALAQSSPQLYWLCVAFLAFDVMFVVICVAVASLIGIAVCCCLPCIIA 258
Query: 189 LAYAIRIREGASEEDIRSLPKYRFSQSNSLLMVHDNKKQLINARNDSCNESHTSEIFLDP 248
+ YA+ +EGA +E+I L K++F + V+ ++ + +E L
Sbjct: 259 ILYALADQEGAPDEEIERLLKFKFLTVKNSEKVNGEIRETQGGIMTGLDTESQTERMLLS 318
Query: 249 DDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNLLR 299
+D+EC ICLC Y DGVEL LPC HHFHS C+ +WLR ATCPLCKFN+L+
Sbjct: 319 EDAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINATCPLCKFNILK 369
>AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348728-4350512 FORWARD LENGTH=408
Length = 408
Score = 217 bits (553), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 171/309 (55%), Gaps = 45/309 (14%)
Query: 40 AYSRAVRVVDIVWNLAFVVPAAGVLLFTLHERPSTPLRLWLCGYAFECLLHMAFVYSEY- 98
AYS+ V V+DIVWNLAFV A +L+ + E P PLR+WL GYA +C+LHM V EY
Sbjct: 95 AYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYR 154
Query: 99 --------------------------------------RSSTALD----SFSRTPYSILK 116
R+S D S+ K
Sbjct: 155 RRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVAK 214
Query: 117 KLEPMNTLTSSVWWVFGFYWIVVGGQALVEDSPRLYWLTVVFLAFDVFFIIFCIGMACVV 176
LE NT+ S +WW+ GFYW+ GGQ L ++SPR+YWL++VFL FDVFF++FC+ +ACV+
Sbjct: 215 HLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVI 274
Query: 177 FFALFCILP-IIALAYAIRIREGASEEDIRSLPKYRFSQ-SNSLLMVHDNKKQLINARND 234
A+ C LP IIA+ YA+ +EGAS+EDI L K++F + ++ +D +
Sbjct: 275 GIAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMT 334
Query: 235 SCNESHTSEIFLDPDDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCK 294
C E L +D+ECCICL Y DG EL LPC HHFH C+ +WL ATCPLCK
Sbjct: 335 ECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCK 394
Query: 295 FNLLRADTL 303
+N+L++ L
Sbjct: 395 YNILKSSNL 403
>AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348941-4350512 FORWARD LENGTH=337
Length = 337
Score = 217 bits (552), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 171/309 (55%), Gaps = 45/309 (14%)
Query: 40 AYSRAVRVVDIVWNLAFVVPAAGVLLFTLHERPSTPLRLWLCGYAFECLLHMAFVYSEY- 98
AYS+ V V+DIVWNLAFV A +L+ + E P PLR+WL GYA +C+LHM V EY
Sbjct: 24 AYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYR 83
Query: 99 --------------------------------------RSSTALD----SFSRTPYSILK 116
R+S D S+ K
Sbjct: 84 RRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVAK 143
Query: 117 KLEPMNTLTSSVWWVFGFYWIVVGGQALVEDSPRLYWLTVVFLAFDVFFIIFCIGMACVV 176
LE NT+ S +WW+ GFYW+ GGQ L ++SPR+YWL++VFL FDVFF++FC+ +ACV+
Sbjct: 144 HLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVI 203
Query: 177 FFALFCILP-IIALAYAIRIREGASEEDIRSLPKYRFSQ-SNSLLMVHDNKKQLINARND 234
A+ C LP IIA+ YA+ +EGAS+EDI L K++F + ++ +D +
Sbjct: 204 GIAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMT 263
Query: 235 SCNESHTSEIFLDPDDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCK 294
C E L +D+ECCICL Y DG EL LPC HHFH C+ +WL ATCPLCK
Sbjct: 264 ECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCK 323
Query: 295 FNLLRADTL 303
+N+L++ L
Sbjct: 324 YNILKSSNL 332
>AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:23425574-23427073 FORWARD
LENGTH=381
Length = 381
Score = 194 bits (494), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 170/309 (55%), Gaps = 49/309 (15%)
Query: 40 AYSRAVRVVDIVWNLAFVVPAAGVLLFTLHERPSTPLRLWLCGYAFECLLHMAFVYSEY- 98
AYS+ V V+D VWNLAFVV A VL+ + E P+ PLR+W+ GY +C++HM V EY
Sbjct: 69 AYSKPVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYR 128
Query: 99 ----------------------------------RSST----ALDSFSRTPYSILKKLEP 120
R+S L S K LE
Sbjct: 129 RRNSRRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDERYLELGQLENENNSFAKHLES 188
Query: 121 MNTLTSSVWWVFGFYWIVVGGQALVEDSPRLYWLTVVFLAFDVFFIIFCIGMACVVFFAL 180
NT+ S +WWV GFYW+ GGQ L + SP+LYWL +VFL FDVFF++FC+ +ACV+ A+
Sbjct: 189 ANTMISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAV 248
Query: 181 FCILP-IIALAYAIRIREGASEEDIRSLPKYRFSQSNSLLMVHDNKKQLINARNDS---- 235
C LP IIA+ YA+ +EGAS+EDI L K++F + + +++Q + DS
Sbjct: 249 CCCLPCIIAVLYAVAEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQ---GQGDSGGVM 305
Query: 236 --CNESHTSEIFLDPDDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLC 293
C E L +D+ECCICL Y D EL LPC HHFH GC+ +WL ATCPLC
Sbjct: 306 TECGTDSPVEHALPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLC 365
Query: 294 KFNLLRADT 302
K+N+L++
Sbjct: 366 KYNILKSSN 374
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 126/311 (40%), Gaps = 86/311 (27%)
Query: 48 VDIVWNLAFVVPAAGVLLFTLHERPSTPLRLWLCGYAFECLLHMAFVYSEYRS---STAL 104
V++V +A +V A V++ E P PL W+ GY CL + +Y +R+ +T
Sbjct: 108 VELVVTVAQIVAAIVVMVLAKDEHPEAPLFTWVIGYTCGCLATLPILYWRFRTYNRATGQ 167
Query: 105 DSFSR----------TPYSILKKLEPMNTLTSS--------------------------- 127
DS R TPY+ + + + S+
Sbjct: 168 DSSQRATSSQGNSESTPYTAVSVAQAADEENSTGVSAAPRNNQVGESLRTRLNGLVDHFK 227
Query: 128 --------VWWVFGFYWIVVGGQALVEDSPRLYWLTVVFLAFD----VFFIIFCIGMACV 175
VW+V G WI GG + DSP+LY L + FL F I C + C
Sbjct: 228 MAIDCFFAVWFVVGNVWIF-GGHSSPSDSPKLYRLCIAFLTFSCIGYAMPFILCATICCC 286
Query: 176 VFFALFCILPIIALAYAIRIREGASEEDIRSLPKYRFSQSN------------SLLMVHD 223
L C++ ++ GA+ E I +LP YRF + L++
Sbjct: 287 ----LPCLISVLGFRENFSQTRGATAEAINALPVYRFKSKSRNDLEFSEEGEGGFLLLGS 342
Query: 224 NKKQLINARNDSCNESHTSEIFLDPDDSECCICLCTYVDGVELYRLPCTHHFHSGCISRW 283
KK+LI+ +D+ CCICL Y D ++ LPC+H FH C+ +W
Sbjct: 343 QKKRLISG-----------------EDASCCICLTRYGDDEQVRELPCSHVFHVDCVDKW 385
Query: 284 LRTKATCPLCK 294
L+ ATCPLCK
Sbjct: 386 LKINATCPLCK 396
>AT4G32600.1 | Symbols: | RING/U-box superfamily protein |
chr4:15724010-15725737 FORWARD LENGTH=453
Length = 453
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 123/297 (41%), Gaps = 57/297 (19%)
Query: 48 VDIVWNLAFVVPAAGVLLFTLHERPSTPLRLWLCGYAFECLLHMAFVYSEY---RSSTAL 104
+++ + ++ A VL + HE P PL W+ GYA C+ + +Y Y ++
Sbjct: 115 IELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYYHSNQASEQ 174
Query: 105 DSFSRTP----------YSILKKLEP----MNTLTS------------------------ 126
DS P +SI + E NT +S
Sbjct: 175 DSGQHRPNLNVAAGPFAFSISRTSEADGRQTNTTSSRGSRYPGFISAARLKVIVEYFKMA 234
Query: 127 -----SVWWVFGFYWIVVGGQALVEDSPRLYWLTVVFLAFD----VFFIIFCIGMACVVF 177
+VW+V G WI GG + ++P LY L +VFL F I C + C
Sbjct: 235 LDCFFAVWFVVGNVWIF-GGHSSAAEAPNLYRLCLVFLTFSCIGYAMPFILCTTICCC-- 291
Query: 178 FALFCILPIIALAYAIRIREGASEEDIRSLPKYRFSQSNSLLMVHDNKKQLINARNDSCN 237
L CI+ I+ + GA+ E I +LP ++F S DN +
Sbjct: 292 --LPCIISILGYREDLTQPRGATPESINALPTHKFKLKKSRSNGDDNGSS--TSEGGVVA 347
Query: 238 ESHTSEIFLDPDDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCK 294
+E + +D+ CCICL Y + EL LPC+H FH C+ +WL+ A+CPLCK
Sbjct: 348 AGTDNERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCK 404
>AT4G26580.2 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 48/272 (17%)
Query: 47 VVDIVWNLAFVVPAAGVLLFTLHERPSTPLRLWLCGYAFECLLHMAFVYSEYRSSTA--- 103
V +++ L + L + +ERP P+RLW+ GY CLL++ +Y YR
Sbjct: 89 VSELIALLLQITVITSTLALSKNERPVWPMRLWITGYNVGCLLNLMLLYGRYRQQDTSHE 148
Query: 104 -------LDSFSRTPYSILKKLEPMNTLTSS------VWWVFGFYWIVVGGQALVEDSPR 150
++ R+ + MN +S +W+V G W+ +P
Sbjct: 149 NAFSFGDIEQQQRSREETTRCSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHYAPI 208
Query: 151 LYWLTVVFLAFDVFFIIFCIGMACVVFFALFCILPIIA--LAYAIRI---REGASEEDIR 205
L+ L + LA++ C ++F L C++P+++ L Y + + +GAS++ I
Sbjct: 209 LHVLCISLLAWNAL----CYSFPFLLFLLLCCVVPLVSSFLGYNMNVGSSEKGASDDQIS 264
Query: 206 SLPKYRFSQSNSLLMVHDNKKQLINARNDSCNESHTSEIFLDPDDSECCICLCTYVDGVE 265
SLP +++ +LI+ +DS + +D ECCICL Y + E
Sbjct: 265 SLPSWKY--------------KLIDETSDSSQAN---------NDPECCICLAKYKEKEE 301
Query: 266 LYRLPCTHHFHSGCISRWLRTKATCPLCKFNL 297
+ +LPC+H FH C+ +WLR + CPLCK +L
Sbjct: 302 VRKLPCSHRFHLKCVDQWLRIISCCPLCKQDL 333
>AT4G26580.1 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 48/272 (17%)
Query: 47 VVDIVWNLAFVVPAAGVLLFTLHERPSTPLRLWLCGYAFECLLHMAFVYSEYRSSTA--- 103
V +++ L + L + +ERP P+RLW+ GY CLL++ +Y YR
Sbjct: 89 VSELIALLLQITVITSTLALSKNERPVWPMRLWITGYNVGCLLNLMLLYGRYRQQDTSHE 148
Query: 104 -------LDSFSRTPYSILKKLEPMNTLTSS------VWWVFGFYWIVVGGQALVEDSPR 150
++ R+ + MN +S +W+V G W+ +P
Sbjct: 149 NAFSFGDIEQQQRSREETTRCSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHYAPI 208
Query: 151 LYWLTVVFLAFDVFFIIFCIGMACVVFFALFCILPIIA--LAYAIRI---REGASEEDIR 205
L+ L + LA++ C ++F L C++P+++ L Y + + +GAS++ I
Sbjct: 209 LHVLCISLLAWNAL----CYSFPFLLFLLLCCVVPLVSSFLGYNMNVGSSEKGASDDQIS 264
Query: 206 SLPKYRFSQSNSLLMVHDNKKQLINARNDSCNESHTSEIFLDPDDSECCICLCTYVDGVE 265
SLP +++ +LI+ +DS + +D ECCICL Y + E
Sbjct: 265 SLPSWKY--------------KLIDETSDSSQAN---------NDPECCICLAKYKEKEE 301
Query: 266 LYRLPCTHHFHSGCISRWLRTKATCPLCKFNL 297
+ +LPC+H FH C+ +WLR + CPLCK +L
Sbjct: 302 VRKLPCSHRFHLKCVDQWLRIISCCPLCKQDL 333
>AT5G55970.2 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 122/265 (46%), Gaps = 54/265 (20%)
Query: 63 VLLFTL----HERPSTPLRLWLCGYAFECLLHMAFVYSEYRSSTALDSFSRTPYSILKKL 118
V+ FTL ERP P+RLW+ GY CLL++ +Y YR LD + +L +
Sbjct: 105 VITFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQ---LDINQGNGF-VLGDV 160
Query: 119 EP-------------MNTLTSS------VWWVFGFYWIVVGGQALVEDSPRLYWLTVVFL 159
E MN +S +W+V G W+ +P+L+ L V L
Sbjct: 161 EQQQRGREETRSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLCVSLL 220
Query: 160 AFDVFFIIFCIGMACVVFFALFCILPIIA--LAYAIRI---REGASEEDIRSLPKYRFSQ 214
A++ C ++F L C++P+I+ L Y + + AS++ I SLP ++F +
Sbjct: 221 AWNAI----CYSFPFLLFLFLCCLVPLISSLLGYNMNMGSSDRAASDDQISSLPSWKFKR 276
Query: 215 SNSLLMVHDNKKQLINARNDSCNESHTSEIFLDPDDSECCICLCTYVDGVELYRLPCTHH 274
+ D+ + DD ECCICL Y D E+ +LPC+H
Sbjct: 277 IDDSASDSDSDSATVT------------------DDPECCICLAKYKDKEEVRKLPCSHK 318
Query: 275 FHSGCISRWLRTKATCPLCKFNLLR 299
FHS C+ +WLR + CPLCK +L R
Sbjct: 319 FHSKCVDQWLRIISCCPLCKQDLPR 343
>AT5G55970.1 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 122/265 (46%), Gaps = 54/265 (20%)
Query: 63 VLLFTL----HERPSTPLRLWLCGYAFECLLHMAFVYSEYRSSTALDSFSRTPYSILKKL 118
V+ FTL ERP P+RLW+ GY CLL++ +Y YR LD + +L +
Sbjct: 105 VITFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQ---LDINQGNGF-VLGDV 160
Query: 119 EP-------------MNTLTSS------VWWVFGFYWIVVGGQALVEDSPRLYWLTVVFL 159
E MN +S +W+V G W+ +P+L+ L V L
Sbjct: 161 EQQQRGREETRSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLCVSLL 220
Query: 160 AFDVFFIIFCIGMACVVFFALFCILPIIA--LAYAIRI---REGASEEDIRSLPKYRFSQ 214
A++ C ++F L C++P+I+ L Y + + AS++ I SLP ++F +
Sbjct: 221 AWNAI----CYSFPFLLFLFLCCLVPLISSLLGYNMNMGSSDRAASDDQISSLPSWKFKR 276
Query: 215 SNSLLMVHDNKKQLINARNDSCNESHTSEIFLDPDDSECCICLCTYVDGVELYRLPCTHH 274
+ D+ + DD ECCICL Y D E+ +LPC+H
Sbjct: 277 IDDSASDSDSDSATVT------------------DDPECCICLAKYKDKEEVRKLPCSHK 318
Query: 275 FHSGCISRWLRTKATCPLCKFNLLR 299
FHS C+ +WLR + CPLCK +L R
Sbjct: 319 FHSKCVDQWLRIISCCPLCKQDLPR 343
>AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein |
chr3:20595300-20597188 REVERSE LENGTH=273
Length = 273
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 200 SEEDIRSLPKYRFS----QSNSLLMVHDNKKQLINARNDSCNESHTSEIFLDPDDSECCI 255
SEE+I +LP +++ ++ L + DS NES D+ C +
Sbjct: 158 SEEEINALPVHKYKVLDPENGCSLAKQASTSSSAEKMLDSANESKKGT----EDELTCSV 213
Query: 256 CLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKF 295
CL G + LPC H FH+GCI WLR + TCP+CKF
Sbjct: 214 CLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVCKF 253
>AT5G24870.2 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 29/46 (63%)
Query: 249 DDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCK 294
DD +C IC YVDG E+ LPC H +H C +WLR K CP+CK
Sbjct: 464 DDVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICK 509
>AT5G24870.1 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 29/46 (63%)
Query: 249 DDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCK 294
DD +C IC YVDG E+ LPC H +H C +WLR K CP+CK
Sbjct: 464 DDVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICK 509
>AT5G10650.2 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 237 NESHTSEIFLDPDDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCK 294
+E+ + ++ D DD +C IC YVDG EL +PC H +H C+ +WLR K CP+CK
Sbjct: 460 DETGSISLYKD-DDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICK 516
>AT5G10650.1 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 237 NESHTSEIFLDPDDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCK 294
+E+ + ++ D DD +C IC YVDG EL +PC H +H C+ +WLR K CP+CK
Sbjct: 460 DETGSISLYKD-DDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICK 516
>AT5G42940.1 | Symbols: | RING/U-box superfamily protein |
chr5:17216649-17219171 REVERSE LENGTH=691
Length = 691
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 248 PDDSE-CCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCK 294
P D+E CC+C Y +G ++ L C H FHS CI WL+ K CP+CK
Sbjct: 631 PQDAEPCCVCQEEYTEGEDMGTLECGHEFHSQCIKEWLKQKNLCPICK 678
>AT5G52140.1 | Symbols: | RING/U-box superfamily protein |
chr5:21184566-21186872 REVERSE LENGTH=280
Length = 280
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 249 DDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCK 294
DDS+C ICL Y G ++ LPC H +H CIS+WL+ C +CK
Sbjct: 230 DDSQCSICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICK 275
>AT4G09130.1 | Symbols: | RING/U-box superfamily protein |
chr4:5815849-5816922 FORWARD LENGTH=357
Length = 357
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 252 ECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNL 297
EC ICLC + D L +P C+H FH+ CI WL +++TCP+C+ NL
Sbjct: 119 ECAICLCEFEDEEPLRWMPPCSHTFHANCIDEWLSSRSTCPVCRANL 165
>AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 |
chr3:17713367-17716051 REVERSE LENGTH=358
Length = 358
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 15/178 (8%)
Query: 129 WWVFGFYWIVVGGQALVEDSPRLYWLTVVFLAFDVFFIIFCIGMACVVFFALFCILPIIA 188
W V G W L E+ + W +++L F + + CI CV + + ++
Sbjct: 102 WTVIGTQWFTKSKTCLPEEGQK--WGFLIWLMFS-YCGLLCIAFICVGKWLTRRQVHLLR 158
Query: 189 LAYAIRIREGASEEDIRSLPKYRFSQSNSLL-------MVHDNKKQLINARNDSC----N 237
I I E D+ +P + F + + + L A+ ++
Sbjct: 159 AQQGIPISEFGILVDMIRVPDWAFEAAGQEMRGISQDAATYHPGLYLTPAQTEAVEALIQ 218
Query: 238 ESHTSEIFLDPDD-SECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCK 294
E + PDD EC ICL + G E+ LPC H+FH CI +WLR CP C+
Sbjct: 219 ELPKFRLKAVPDDCGECLICLEEFHIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCR 276
>AT2G15530.3 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 239 SHTSEIFLDPDDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNLL 298
S S + L + CCIC YV+G L L C H FH CI +W+ K CP+CK L
Sbjct: 642 SSPSSVELHQNIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTEAL 701
Query: 299 R 299
+
Sbjct: 702 K 702
>AT2G15530.2 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 239 SHTSEIFLDPDDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNLL 298
S S + L + CCIC YV+G L L C H FH CI +W+ K CP+CK L
Sbjct: 642 SSPSSVELHQNIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTEAL 701
Query: 299 R 299
+
Sbjct: 702 K 702
>AT2G15530.1 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 239 SHTSEIFLDPDDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNLL 298
S S + L + CCIC YV+G L L C H FH CI +W+ K CP+CK L
Sbjct: 642 SSPSSVELHQNIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTEAL 701
Query: 299 R 299
+
Sbjct: 702 K 702
>AT1G22500.1 | Symbols: | RING/U-box superfamily protein |
chr1:7949581-7950726 FORWARD LENGTH=381
Length = 381
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 252 ECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNLL 298
EC +CL + D L +P C H FH GCI WLR++ TCPLC+ NL+
Sbjct: 117 ECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANLV 164
>AT5G60820.1 | Symbols: | RING/U-box superfamily protein |
chr5:24469636-24470895 FORWARD LENGTH=419
Length = 419
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 241 TSEIFLDPDDSECC-ICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNL 297
++ + DD+ CC +C + G E+ LPC H +HS CI WL + TCP+C+F L
Sbjct: 359 NEDVMENDDDAVCCAVCKEEMIVGKEVAELPCRHKYHSECIVPWLGIRNTCPVCRFEL 416
>AT3G58720.1 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717892 REVERSE LENGTH=238
Length = 238
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 230 NARNDSCNESHTSEIFLDPDDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKAT 289
N S + +T + + DD C +CL + + PC H FH CI WL+TK
Sbjct: 121 NKNPGSESSRNTQNLSGEEDDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQ 180
Query: 290 CPLCKFNLLR 299
CP+C+F +L+
Sbjct: 181 CPVCRFVILK 190
>AT1G23980.1 | Symbols: | RING/U-box superfamily protein |
chr1:8484879-8485988 REVERSE LENGTH=369
Length = 369
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Query: 166 IIFCIGMACVVFFALFCILPIIALAYAIRIREGASEEDIRSLPKYRFSQSNS-------L 218
I+F I + V+FF + IL ++ Y + R S S FS S++ L
Sbjct: 53 ILFIIVLLSVIFF-ICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQL 111
Query: 219 LMVHDNKKQLINARNDSCNESHTSEIFLDPDDSECCICLCTYVDGVELYRLP-CTHHFHS 277
+HD+ L A D+ EI + +C +CLC + + +L LP C+H FH
Sbjct: 112 FHLHDSG--LDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHI 169
Query: 278 GCISRWLRTKATCPLCKFNL 297
CI WL + +TCPLC+ L
Sbjct: 170 DCIDTWLLSNSTCPLCRGTL 189
>AT1G49220.1 | Symbols: | RING/U-box superfamily protein |
chr1:18205946-18206701 FORWARD LENGTH=251
Length = 251
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 239 SHTSEIFLDPDDSECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCK 294
S++ E+ L D EC ICL +V G +L LP C H FH CI +WL+ TCP C+
Sbjct: 121 SYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCR 177
>AT2G15530.4 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777899 FORWARD LENGTH=780
Length = 780
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 239 SHTSEIFLDPDDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNLL 298
S S + L + CCIC YV+G L L C H FH CI +W+ K CP+ +FN
Sbjct: 642 SSPSSVELHQNIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPIFRFNKE 701
Query: 299 R 299
R
Sbjct: 702 R 702
>AT4G34040.1 | Symbols: | RING/U-box superfamily protein |
chr4:16304638-16307503 REVERSE LENGTH=666
Length = 666
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 240 HTSEIFLDPDDSE-CCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCK 294
HTS D E CC+C Y +G +L L C H FH+ C+ +WL K CP+CK
Sbjct: 605 HTSSAAGSHQDMEPCCVCQEEYAEGDDLGTLGCGHEFHTACVKQWLMLKNLCPICK 660
>AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A |
chr2:7576640-7577197 REVERSE LENGTH=185
Length = 185
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 39/137 (28%)
Query: 175 VVFFALFCILPIIA-LAYAIRI---------------REGASEEDIRSLPKYRFSQSNSL 218
V+ AL C L +A LA +R +G ++ ++SLP+ F+ +
Sbjct: 30 VILSALLCALICVAGLAAVVRCAWLRRFTAGGDSPSPNKGLKKKALQSLPRSTFTAA--- 86
Query: 219 LMVHDNKKQLINARNDSCNESHTSEIFLDPDDSECCICLCTYVDGVELYRLP-CTHHFHS 277
ES + + D +EC ICL + DG E+ LP C H FH
Sbjct: 87 -------------------ESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHV 127
Query: 278 GCISRWLRTKATCPLCK 294
CI +WL ++++CP C+
Sbjct: 128 ECIDKWLVSRSSCPSCR 144
>AT4G09110.1 | Symbols: | RING/U-box superfamily protein |
chr4:5812488-5813396 FORWARD LENGTH=302
Length = 302
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 252 ECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNL 297
EC ICL +VD L +P C+H FH+ CI WL +++TCP C+ NL
Sbjct: 122 ECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQSTCPACRANL 168
>AT3G58720.2 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717908 REVERSE LENGTH=266
Length = 266
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 240 HTSEIFLDPDDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNLLR 299
+T + + DD C +CL + + PC H FH CI WL+TK CP+C+F +L+
Sbjct: 159 NTQNLSGEEDDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRFVILK 218
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 251 SECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNLLRAD 301
++C +C+ + DG ++ ++PC H FH C+ WL +CP+C+F L D
Sbjct: 214 NQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDD 264
>AT4G31450.1 | Symbols: | RING/U-box superfamily protein |
chr4:15255955-15257977 REVERSE LENGTH=497
Length = 497
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 247 DPDDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCK 294
+ +D++C IC Y G E+ RL C H +H C+ WLR K+ CP+CK
Sbjct: 442 NKEDAKCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSWCPICK 489
>AT2G20030.1 | Symbols: | RING/U-box superfamily protein |
chr2:8647813-8648985 FORWARD LENGTH=390
Length = 390
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 252 ECCICLCTYVDGVELYRL--PCTHHFHSGCISRWLRTKATCPLCKFNLLRADTL 303
EC +CL + D VE+ RL C H FH GCI +WL ATCPLC+ + D L
Sbjct: 123 ECSVCLSKFED-VEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIEDDL 175
>AT2G35000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14751809-14752945 REVERSE LENGTH=378
Length = 378
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 36/161 (22%)
Query: 147 DSPRLYWLTVVFLA--FDVFFIIFCI-GMACVVFFALFCILPIIALAYAIRIRE----GA 199
+ P + +TV+FL F VF IFC A ++F A + +RIR G
Sbjct: 48 NDPVVVVITVLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGL 107
Query: 200 SEEDIRSLPKYRFSQSNSLLMVHDNKKQLINARNDSCNESHTSEIFLDPDDSECCICLCT 259
E I + P + +S+ + + + EC +CLC
Sbjct: 108 DAEAIETFPTFLYSEVKA--------------------------VRIGKGGVECAVCLCE 141
Query: 260 YVDGVELYRL--PCTHHFHSGCISRWLRTKATCPLCKFNLL 298
+ D E RL PC H FH+ C+ WL +TCPLC+ +L+
Sbjct: 142 FEDD-ETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRADLV 181
>AT1G26800.1 | Symbols: | RING/U-box superfamily protein |
chr1:9285576-9286190 REVERSE LENGTH=204
Length = 204
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 244 IFLDPDDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNL 297
+ +D + EC ICL + + +PC H FH GCI +WL +CP+C++ +
Sbjct: 104 VEIDGCEGECVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEM 157
>AT4G09120.1 | Symbols: | RING/U-box superfamily protein |
chr4:5813998-5815035 FORWARD LENGTH=345
Length = 345
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 56/144 (38%), Gaps = 30/144 (20%)
Query: 158 FLAFDVFFIIFCIGMACVVFFALFCILPIIALAYAI---RIREGASEEDIRSLPKYRFSQ 214
+A V I +GM +F I A + R R G +E I S P + +S+
Sbjct: 51 IIAIVVLAIFISLGMVSCCLHCIFYREEIGAAGQDVLHSRARRGLEKEVIESFPTFLYSE 110
Query: 215 SNSLLMVHDNKKQLINARNDSCNESHTSEIFLDPDDSECCICLCTYVDGVELYRLP-CTH 273
L + EC ICL + D L +P C+H
Sbjct: 111 VKGLK--------------------------IGKGGVECAICLSEFEDQETLRWMPPCSH 144
Query: 274 HFHSGCISRWLRTKATCPLCKFNL 297
FH+ CI WL + +TCP+C+ NL
Sbjct: 145 TFHANCIDVWLSSWSTCPVCRANL 168
>AT1G14200.1 | Symbols: | RING/U-box superfamily protein |
chr1:4854532-4855071 REVERSE LENGTH=179
Length = 179
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 253 CCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNL 297
C ICL + G +PC H FHS C+ WL ATCP+C++ +
Sbjct: 109 CAICLDEWSKGDVAAEMPCKHKFHSKCVEEWLGRHATCPMCRYEM 153
>AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein |
chr5:7092663-7094310 REVERSE LENGTH=310
Length = 310
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 250 DSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNLLRAD 301
++ECCIC V G ++ LPC H FH C+ WL +CP+C+ L D
Sbjct: 227 EAECCICKENLVIGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDD 278
>AT5G07040.1 | Symbols: | RING/U-box superfamily protein |
chr5:2190344-2190823 FORWARD LENGTH=159
Length = 159
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 248 PDDSECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCK 294
P++ C ICLC Y + +P C H FH+ C+ WLRT ATCPLC+
Sbjct: 89 PNNGPCSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSATCPLCR 136
>AT5G40250.1 | Symbols: | RING/U-box superfamily protein |
chr5:16086056-16087186 FORWARD LENGTH=376
Length = 376
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 252 ECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNL 297
+C +CLC + + +L LP C+H FH CI WL++ +TCPLC+ L
Sbjct: 142 DCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTL 188
>AT1G72200.1 | Symbols: | RING/U-box superfamily protein |
chr1:27169935-27171149 REVERSE LENGTH=404
Length = 404
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 252 ECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNLL 298
EC +CL + D L +P C H FH GCI WLR+ TCPLC+ +L+
Sbjct: 143 ECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCRADLI 190
>AT2G34990.1 | Symbols: | RING/U-box superfamily protein |
chr2:14750260-14751168 REVERSE LENGTH=302
Length = 302
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 175 VVFFALFCILPIIALAYAIRIREGASEEDIRSLPKYRFSQSNSLLMVHDNKKQLINARND 234
++ FA+F I+ + ++ + R+ S+E I S+ V + +IN+
Sbjct: 20 IILFAIF-IVGLASVCFRWTSRQFYSQESINPFTDSDVESRTSITAVRGLDEAIINS-FP 77
Query: 235 SCNESHTSEIFLDPDDSECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLC 293
+ S E + EC +C+C + D L +P C H FH+ C+S WL +TCPLC
Sbjct: 78 TFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDHSTCPLC 137
Query: 294 KFNL 297
+ +L
Sbjct: 138 RVDL 141
>AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |
chr5:22818254-22819444 FORWARD LENGTH=396
Length = 396
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 252 ECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNL 297
+C +CL + G E +PC H FH CI WL ++CP+C+F L
Sbjct: 258 QCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFEL 303
>AT3G19910.1 | Symbols: | RING/U-box superfamily protein |
chr3:6926497-6929324 FORWARD LENGTH=340
Length = 340
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 41/96 (42%), Gaps = 28/96 (29%)
Query: 198 GASEEDIRSLPKYRFSQSNSLLMVHDNKKQLINARNDSCNESHTSEIFLDPDDSECCICL 257
G S + I SLP R+ + DN+ N N+SC IC
Sbjct: 261 GLSADTIASLPSKRYKEG-------DNQ----NGTNESC-----------------VICR 292
Query: 258 CTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLC 293
Y D +L LPC H +HS CI+ WL+ CP+C
Sbjct: 293 LDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVC 328
>AT1G55530.1 | Symbols: | RING/U-box superfamily protein |
chr1:20729472-20730527 REVERSE LENGTH=351
Length = 351
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 252 ECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNL 297
+C +CL + G E +PCTH FHS C+ WL ++CP+C++ L
Sbjct: 222 QCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQL 267
>AT1G20823.1 | Symbols: | RING/U-box superfamily protein |
chr1:7238880-7239473 FORWARD LENGTH=197
Length = 197
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Query: 179 ALFCILPIIALAYAIRIREGASEEDIRSLPKYRFSQSNSLLMVHDNKKQLINA--RNDSC 236
AL C+L +IA++ + +R A+ S + + Q KK+++ + +
Sbjct: 40 ALICVLGLIAVSRCVWLRRLAAGNRTVSGSQTQSPQPPVAAANKGLKKKVLQSLPKLTFS 99
Query: 237 NESHTSEIFLDPDDSECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKF 295
ES SE F +EC ICL + G EL LP C H FH CI WL + ++CP C+
Sbjct: 100 PESPESEKF-----AECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQ 154
Query: 296 NLLRA 300
L+ A
Sbjct: 155 ILVVA 159
>AT5G45290.1 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=545
Length = 545
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 249 DDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRT-KATCPLCKFNLLRAD 301
D S+C ICL Y + + LPC H FH C+ +WL+ CPLC+ ++ R D
Sbjct: 486 DPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEIHRVCPLCRGDICRHD 539
>AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:6471150-6471824 REVERSE LENGTH=224
Length = 224
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 253 CCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNL 297
C ICL + DG ++ LPC H F C+ W T CPLC+F L
Sbjct: 175 CTICLEEFNDGTKVMTLPCGHEFDDECVLTWFETNHDCPLCRFKL 219
>AT5G45290.2 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=546
Length = 546
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 249 DDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRT--KATCPLCKFNLLRAD 301
D S+C ICL Y + + LPC H FH C+ +WL+ CPLC+ ++ R D
Sbjct: 486 DPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEIHSRVCPLCRGDICRHD 540
>AT1G60360.1 | Symbols: | RING/U-box superfamily protein |
chr1:22242748-22243731 REVERSE LENGTH=327
Length = 327
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 249 DDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNLLRADTLV 304
D S+C +C+ ++ G + LPC H +H CI WLR +CP+C+ +L +T+
Sbjct: 220 DMSQCTVCMEEFIVGGDATELPCKHIYHKDCIVPWLRLNNSCPICRRDLPLVNTVA 275
>AT1G53820.1 | Symbols: | RING/U-box superfamily protein |
chr1:20091491-20092423 FORWARD LENGTH=310
Length = 310
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 249 DDSECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCK 294
D EC +CL VDG + LP C H FH CI W ++ +TCPLC+
Sbjct: 116 DGLECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCR 162
>AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein |
chr2:8086860-8088131 REVERSE LENGTH=423
Length = 423
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 252 ECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNLL 298
+C +CLC + +L LP C+H FH CI WL + +TCPLC+ NLL
Sbjct: 125 DCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLL 172
>AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr4:6041652-6043681 REVERSE
LENGTH=448
Length = 448
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 9/63 (14%)
Query: 233 NDSCNESHTSEIFLDPDDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWL-RTKATCP 291
N C+E+ TS + CCICL Y G +L LPC H FH C+ WL + K+ CP
Sbjct: 222 NGICDEATTSIL--------CCICLENYEKGDKLRILPCHHKFHVACVDLWLGQRKSFCP 273
Query: 292 LCK 294
+CK
Sbjct: 274 VCK 276
>AT1G33480.1 | Symbols: | RING/U-box superfamily protein |
chr1:12148758-12150121 REVERSE LENGTH=261
Length = 261
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 250 DSECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNLL 298
DS+C +CL Y +L ++P C H FH CI WL + TCPLC+ L+
Sbjct: 97 DSQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSHTTCPLCRLALI 146
>AT4G26400.1 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 252 ECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNL 297
+C ICL + G E +PC H FH CI WL ++CP+C++ L
Sbjct: 240 QCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYEL 285
>AT4G26400.2 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 252 ECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNL 297
+C ICL + G E +PC H FH CI WL ++CP+C++ L
Sbjct: 240 QCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYEL 285
>AT1G49850.1 | Symbols: | RING/U-box superfamily protein |
chr1:18455326-18456444 REVERSE LENGTH=250
Length = 250
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 252 ECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCK 294
+C ICL ++ G L LPCTH FHS C++ WLR CP C+
Sbjct: 202 DCSICLESFTKGDMLISLPCTHSFHSSCLNPWLRACGDCPCCR 244
>AT1G74620.1 | Symbols: | RING/U-box superfamily protein |
chr1:28028252-28029001 FORWARD LENGTH=249
Length = 249
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 249 DDSECCICLCTYVDGVELY-RLPCTHHFHSGCISRWLRTKATCPLCK 294
+++ C IC+ Y++G + +LPC H FH CI++WL+ CPLC+
Sbjct: 179 EENGCAICMEDYIEGSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCR 225
>AT5G17600.1 | Symbols: | RING/U-box superfamily protein |
chr5:5800029-5801117 REVERSE LENGTH=362
Length = 362
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 14/99 (14%)
Query: 210 YRFSQSNSLLMVHDNK-----KQLINARNDSCNESHTSEIFLDP--------DDSECCIC 256
++ S S +L + H+ + Q I+ D NES I + D S+C +C
Sbjct: 86 HQTSSSETLNLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVDGSDCSVC 145
Query: 257 LCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCK 294
L + + L LP C H FH CI WL++ + CPLC+
Sbjct: 146 LSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCR 184
>AT3G10910.1 | Symbols: | RING/U-box superfamily protein |
chr3:3413068-3413613 REVERSE LENGTH=181
Length = 181
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 61/140 (43%), Gaps = 10/140 (7%)
Query: 161 FDVFFIIFCIGMACVVFFALFCILPI-IALAYAIRIREGASEEDIRSLPKYRFSQSNSLL 219
FD +I + C AL C L + AL +RI + +D S + L
Sbjct: 29 FDTNMVIILAALLC----ALICALSLNSALRCVLRITRRFTSDDQVSNASNANANLGRLA 84
Query: 220 MVHDNKKQLINARNDSCNESHTSEIFLDPDDSECCICLCTYVDGVELYRLP-CTHHFHSG 278
KKQ + S +D +EC ICL + DG ++ LP C H FH
Sbjct: 85 AATGLKKQALKQIPVGLYGSG----IIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVR 140
Query: 279 CISRWLRTKATCPLCKFNLL 298
CI WL ++++CP C+ +LL
Sbjct: 141 CIDTWLLSRSSCPTCRQSLL 160
>AT2G29840.1 | Symbols: | RING/U-box superfamily protein |
chr2:12732387-12733983 REVERSE LENGTH=293
Length = 293
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%)
Query: 253 CCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNL 297
C ICL + DG + LPC H F C +W T CPLC+F L
Sbjct: 244 CSICLEEFDDGRSIVALPCGHEFDDECALKWFETNHDCPLCRFKL 288
>AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:17178837-17180024 REVERSE
LENGTH=395
Length = 395
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 250 DSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNL 297
++ C +C + G+E +PC H FH CI WL + +CP+C+F L
Sbjct: 212 EANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFEL 259
>AT4G28890.1 | Symbols: | RING/U-box superfamily protein |
chr4:14256437-14257735 REVERSE LENGTH=432
Length = 432
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 252 ECCICLCTYVDGVELYRL--PCTHHFHSGCISRWLRTKATCPLCK 294
+C +CL + + VE+ RL C H FH GCI +WL ATCPLC+
Sbjct: 122 DCSVCLSKF-ESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCR 165
>AT1G49210.1 | Symbols: | RING/U-box superfamily protein |
chr1:18201994-18202671 FORWARD LENGTH=225
Length = 225
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 239 SHTSEIFLDPDDSECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNL 297
S++ E+ L EC ICL +V G +L LP C H FH CI +WL+ TCP C+ L
Sbjct: 121 SYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCL 180
Query: 298 LRA 300
+
Sbjct: 181 VET 183
>AT4G10150.1 | Symbols: | RING/U-box superfamily protein |
chr4:6328136-6329558 FORWARD LENGTH=236
Length = 236
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 250 DSECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNLLRADTL 303
DS+C +CL Y +L ++P C H FH CI WL + TCPLC+ +L+ +L
Sbjct: 108 DSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIPKPSL 162
>AT4G12190.1 | Symbols: | RING/U-box superfamily protein |
chr4:7278545-7278760 REVERSE LENGTH=71
Length = 71
Score = 51.2 bits (121), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 253 CCICLCTYVDGV---ELYRLPCTHHFHSGCISRWLRTKATCPLCKFNL 297
C ICL + V G ++ R+ C+H FH+GC+ WL+ K TCPLC+ L
Sbjct: 22 CSICLESLVSGPKPRDITRMTCSHVFHNGCLLEWLKRKNTCPLCRTEL 69
>AT3G13430.3 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 252 ECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNLLRAD 301
+C +CL + G+E +PC H FHS C+ WL ++CP+C++ L D
Sbjct: 224 QCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGD 273
>AT3G13430.2 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 252 ECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNLLRAD 301
+C +CL + G+E +PC H FHS C+ WL ++CP+C++ L D
Sbjct: 224 QCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGD 273
>AT3G13430.1 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 252 ECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNLLRAD 301
+C +CL + G+E +PC H FHS C+ WL ++CP+C++ L D
Sbjct: 224 QCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGD 273
>AT3G60080.1 | Symbols: | RING/U-box superfamily protein |
chr3:22187635-22188555 FORWARD LENGTH=306
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 241 TSEIFLDPDDSE------CCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCK 294
+S + DDS+ C +C ++ G RLPC+H +HS CI WL +CPLC+
Sbjct: 151 SSSLLCSTDDSDPDSVLLCAVCKEDFIIGESARRLPCSHIYHSDCIVPWLSDHNSCPLCR 210
Query: 295 FNL 297
F L
Sbjct: 211 FEL 213
>AT5G08139.1 | Symbols: | RING/U-box superfamily protein |
chr5:2616487-2617617 FORWARD LENGTH=376
Length = 376
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 253 CCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNLLRAD 301
C +C G + +LPC H +HS CI WL+ + TCP+C++ L D
Sbjct: 309 CAVCKDEMNIGNKAVQLPCNHKYHSECIVPWLKVRNTCPVCRYELPTDD 357
>AT5G57750.1 | Symbols: | RING/U-box superfamily protein |
chr5:23399668-23400300 FORWARD LENGTH=210
Length = 210
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 244 IFLDPDDSECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFN 296
I L D S+C +CL + EL LP C+H FH CI WL T +TCPLC+ N
Sbjct: 113 IGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCRDN 166
>AT1G45180.1 | Symbols: | RING/U-box superfamily protein |
chr1:17099335-17101683 FORWARD LENGTH=645
Length = 645
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 253 CCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCK 294
CC+C Y + E+ RL C H FHS CI WL+ K CP+CK
Sbjct: 592 CCVCQEEYKEEEEIGRLECGHDFHSQCIKEWLKQKNLCPICK 633
>AT1G35330.1 | Symbols: | RING/U-box superfamily protein |
chr1:12965046-12966113 FORWARD LENGTH=327
Length = 327
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 41/161 (25%)
Query: 150 RLYWLTVVFLAFDVFFIIFCIGMACVVFFALFCILPIIA-----------LAYAIRIREG 198
R + V +A +F ++F + +AC V + P +A+ R G
Sbjct: 41 RPNQVPAVIIAMLMFTLLFSM-LACCVCYKYTNTSPHGTSSDTEEGGHGEVAFTRRTSRG 99
Query: 199 ASEEDIRSLPKYRFSQSNSLLMVHDNKKQLINARNDSCNESHTSEIFLDPDDSECCICLC 258
++ I S P + +SQ L + EC ICL
Sbjct: 100 LGKDVINSFPSFLYSQVKGLK--------------------------IGKGGVECAICLN 133
Query: 259 TYVDGVELYRL--PCTHHFHSGCISRWLRTKATCPLCKFNL 297
+ D E RL PC+H FH+ CI WL +++TCP+C+ +L
Sbjct: 134 EFED-EETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASL 173
>AT1G70910.1 | Symbols: DEP | RING/U-box superfamily protein |
chr1:26734155-26734640 FORWARD LENGTH=161
Length = 161
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 241 TSEIFLDPDDSECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNLLR 299
T +IF +PD C +CL ++ L+ +P C H FH CI +WL T CPLC ++
Sbjct: 102 TPQIFEEPDMETCGLCL---LEEQHLFDMPNCAHVFHGDCIDKWLSTSNNCPLCGVEIMD 158
Query: 300 AD 301
D
Sbjct: 159 DD 160
>AT1G49200.1 | Symbols: | RING/U-box superfamily protein |
chr1:18198298-18198978 FORWARD LENGTH=226
Length = 226
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 239 SHTSEIFLDPDDSECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNL 297
S++ E+ L EC ICL +V G ++ LP C H FH CI +WL+ TCP C+ L
Sbjct: 122 SYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRHCL 181
Query: 298 LR 299
+
Sbjct: 182 VE 183
>AT3G30460.1 | Symbols: | RING/U-box superfamily protein |
chr3:12104433-12104876 FORWARD LENGTH=147
Length = 147
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 253 CCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNL 297
C IC L LPC H++H CIS WL + TCPLC+ N+
Sbjct: 97 CAICREELAANERLSELPCRHYYHKECISNWLSNRNTCPLCRHNV 141
>AT1G21960.1 | Symbols: | RING/U-box superfamily protein |
chr1:7725972-7726586 FORWARD LENGTH=204
Length = 204
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 27/51 (52%)
Query: 247 DPDDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNL 297
+ D S C ICL + G + LPC H F GCI +W CPLC+F L
Sbjct: 152 NSDASVCTICLEEFEKGEIVVTLPCGHEFDDGCIGKWFLKDHVCPLCRFEL 202
>AT2G27940.1 | Symbols: | RING/U-box superfamily protein |
chr2:11897963-11898742 FORWARD LENGTH=237
Length = 237
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 31/107 (28%)
Query: 196 REGASEEDIRSLPKYRFSQSNSLLMVHDNKKQLINARNDSCNESHTSEIFLDPDDSECCI 255
R G + +RSLP YR++++ RN+ +C I
Sbjct: 113 RRGLDSQAVRSLPVYRYTKA-------------AKQRNE-----------------DCVI 142
Query: 256 CLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNLLRAD 301
CL + +G + +P C H FH C+ WL + TCPLC+ N L +D
Sbjct: 143 CLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLFSD 189
>AT4G10160.1 | Symbols: | RING/U-box superfamily protein |
chr4:6336023-6337301 FORWARD LENGTH=225
Length = 225
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 249 DDSECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNLL 298
+D++C +CL Y +L ++P C H FH CI WL + TCPLC+ +L+
Sbjct: 93 NDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLI 143
>AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein |
chr1:27226405-27227379 FORWARD LENGTH=324
Length = 324
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 12/68 (17%)
Query: 232 RNDSCNESHTSEIFLDPDDSECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATC 290
R DSC D EC ICL V G + LP C H FH CI W ++ +TC
Sbjct: 117 RQDSCK-----------DGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTC 165
Query: 291 PLCKFNLL 298
P+C+ +L
Sbjct: 166 PICRNTVL 173
>AT4G05350.1 | Symbols: | RING/U-box superfamily protein |
chr4:2726910-2727530 REVERSE LENGTH=206
Length = 206
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 253 CCICLCTYVDG---VELYRLPCTHHFHSGCISRWLRTKATCPLCKFNL 297
C ICL + V G ++ R+ C+H FH+GC+ WL+ K TCPLC+ +
Sbjct: 157 CSICLESLVSGPKPRDVTRMTCSHVFHNGCLLEWLKRKNTCPLCRTEI 204
>AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein |
chr3:1477377-1478573 FORWARD LENGTH=398
Length = 398
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 252 ECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNL 297
EC ICL + D L LP C H FH CI WL TCP+C+ NL
Sbjct: 127 ECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANL 173
>AT5G53910.1 | Symbols: | RING/U-box superfamily protein |
chr5:21890643-21891335 FORWARD LENGTH=230
Length = 230
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 252 ECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNLLRAD 301
+C IC + G E+ L C H F + CI W + + CPLC+F L R D
Sbjct: 171 KCAICFQEFKTGREVATLLCGHEFDNKCIMEWFKVRYNCPLCRFELPRED 220
>AT2G46160.1 | Symbols: | RING/U-box superfamily protein |
chr2:18963109-18963753 FORWARD LENGTH=214
Length = 214
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 22/106 (20%)
Query: 198 GASEEDIRSLPKYRFSQSNSLLMVHDNKKQLINARNDSCNESHTSEIFLDPDDSECCICL 257
G + I S PK+ FS+ S + +S+ F D+ C ICL
Sbjct: 104 GLDQAVINSYPKFHFSKDTS---------------------AASSDGFGGGGDTTCSICL 142
Query: 258 CTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNLLRADT 302
C Y + L +P C H+FH C+ WL+ +CP+C+ + L T
Sbjct: 143 CEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPT 188
>AT5G52150.1 | Symbols: | RING/U-box superfamily protein |
chr5:21189988-21191303 REVERSE LENGTH=200
Length = 200
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 248 PDDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLR 285
PD EC IC+ Y G ++ LPC H FH CI+ WL+
Sbjct: 159 PDRKECSICIADYEKGDKITILPCKHAFHKDCIANWLK 196
>AT3G18773.1 | Symbols: | RING/U-box superfamily protein |
chr3:6466304-6466966 FORWARD LENGTH=220
Length = 220
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 239 SHTSEIFLDPDDSECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNL 297
+++ EI L EC ICL +V G +L LP C H FH CI +WL TCP C+ L
Sbjct: 116 NYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCRHCL 175
Query: 298 L 298
+
Sbjct: 176 V 176
>AT5G07225.1 | Symbols: | RING/U-box superfamily protein |
chr5:2268642-2270227 REVERSE LENGTH=234
Length = 234
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 249 DDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNLL 298
+D C IC YV G +L LPCTH +H CIS WL+ C +C+ ++
Sbjct: 184 EDKMCMICHSDYVRGDKLTILPCTHKYHKDCISHWLQNSKLCCVCQREVI 233
>AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive 1
| chr5:9684119-9685225 FORWARD LENGTH=368
Length = 368
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 252 ECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNL 297
EC ICL + D L LP C H FH CI WL+ TCP+C+ NL
Sbjct: 123 ECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNL 169
>AT1G49230.1 | Symbols: | RING/U-box superfamily protein |
chr1:18209320-18209979 FORWARD LENGTH=219
Length = 219
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 239 SHTSEIFLDPDDSECCICLCTYVDGVELYRLPCTHH-FHSGCISRWLRTKATCPLCKFNL 297
S+++E+ L D+EC ICL +V + LP HH FH CI +WL + ++CP C+ L
Sbjct: 117 SYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHCL 176
Query: 298 LRA 300
++
Sbjct: 177 IQT 179
>AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B |
chr4:16852233-16852835 REVERSE LENGTH=200
Length = 200
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 247 DPDDS-ECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNLL 298
D D S EC IC+ + +G E+ LP C+H FH CI +WL ++++CP C+ L+
Sbjct: 106 DGDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCRRILV 159
>AT4G40070.1 | Symbols: | RING/U-box superfamily protein |
chr4:18576533-18577504 FORWARD LENGTH=323
Length = 323
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 239 SHTSEIFLDPDDSECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNL 297
S E + D EC ICL D + LP C H FH CI WL + ATCP+C+ NL
Sbjct: 110 SSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNL 169
>AT5G02750.1 | Symbols: | RING/U-box superfamily protein |
chr5:620101-620952 FORWARD LENGTH=283
Length = 283
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 27/50 (54%)
Query: 252 ECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNLLRAD 301
EC IC +G ++ +PC H FH CI WL K TCP C+F L D
Sbjct: 213 ECVICKEEMSEGRDVCEMPCQHFFHWKCILPWLSKKNTCPFCRFQLPTDD 262
>AT5G01880.1 | Symbols: | RING/U-box superfamily protein |
chr5:339017-339496 FORWARD LENGTH=159
Length = 159
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 251 SECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNLL 298
+EC ICL + DG + LP C H FH CI WL + ++CP C+ +L+
Sbjct: 103 TECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSLI 151
>AT4G33565.1 | Symbols: | RING/U-box superfamily protein |
chr4:16136821-16137924 FORWARD LENGTH=367
Length = 367
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 251 SECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNLLRADTLV 304
++C +CL + + L LP C H FH CI WLR+ CPLC+ ++ A+T++
Sbjct: 215 TDCSVCLSEFEEEETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCRAPIVEANTMI 269
>AT1G18770.1 | Symbols: | RING/U-box superfamily protein |
chr1:6473370-6474048 REVERSE LENGTH=106
Length = 106
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 253 CCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNL 297
C ICL + +G + LPC H F C+ +W T +CPLC+F L
Sbjct: 59 CIICLEEFSEGRRVVTLPCGHDFDDECVLKWFETNHSCPLCRFKL 103
>AT5G05280.1 | Symbols: | RING/U-box superfamily protein |
chr5:1565509-1566039 REVERSE LENGTH=176
Length = 176
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 251 SECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNLLRADT 302
+EC ICL +V+G + LP C H FH CI WL + ++CP C+ +LL T
Sbjct: 111 TECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSLLEHQT 163
>AT3G02340.1 | Symbols: | RING/U-box superfamily protein |
chr3:477032-478261 FORWARD LENGTH=409
Length = 409
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 246 LDPDDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNLLRAD 301
LD ++ C +C + ++ RLPC+H +H CI WL + TCP+C++ L D
Sbjct: 328 LDKGNNVCAVCKDEMLVEEKVRRLPCSHFYHGECIIPWLGIRNTCPVCRYELPTDD 383
>AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein |
chr4:9948853-9949785 REVERSE LENGTH=310
Length = 310
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 251 SECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNLL 298
++C ICL + + L LP C H FH CI RWL++ + CPLC+ ++
Sbjct: 153 TDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKII 201
>AT5G66070.2 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=245
Length = 245
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 248 PDDSECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNL 297
P+ C +CL + G + LP C H FH CI +WLR A+CPLC+ +L
Sbjct: 195 PEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRRHL 245
>AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zinc
finger (C3HC4-type RING finger) family protein |
chr3:17725410-17727954 REVERSE LENGTH=349
Length = 349
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 252 ECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNL 297
+C +CL + D +L LP C+H FH CI WL + +TCPLC+ +L
Sbjct: 206 DCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSL 252
>AT5G53110.1 | Symbols: | RING/U-box superfamily protein |
chr5:21529022-21533008 FORWARD LENGTH=382
Length = 382
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 249 DDSECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCK 294
DD+ C ICL Y L +P C H FH+ CI WL+ TCP+C+
Sbjct: 326 DDATCAICLSEYEPKETLRTIPQCQHCFHADCIDEWLKLNGTCPVCR 372
>AT1G04360.1 | Symbols: | RING/U-box superfamily protein |
chr1:1167507-1168652 REVERSE LENGTH=381
Length = 381
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 23/101 (22%)
Query: 195 IREGASEEDIRSLPKYRFSQSNSLLMVHDNKKQLINARNDSCNESHTSEIFLDPDDSECC 254
+ G E IR++P ++F K+ ++ D S EC
Sbjct: 98 VNRGLDESAIRAIPVFKFK-----------KRDVVAGEEDQSKNSQ-----------ECS 135
Query: 255 ICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCK 294
+CL + + +L +P C H FH CI WL+ A CPLC+
Sbjct: 136 VCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCR 176
>AT5G66070.1 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=221
Length = 221
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 248 PDDSECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKFNL 297
P+ C +CL + G + LP C H FH CI +WLR A+CPLC+ +L
Sbjct: 171 PEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRRHL 221
>AT5G15820.1 | Symbols: | RING/U-box superfamily protein |
chr5:5161787-5162833 FORWARD LENGTH=348
Length = 348
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 253 CCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNLLRAD 301
C IC V ++ RLPC H++H CI WL + TCP+C+ L D
Sbjct: 291 CAICKDEVVFKEKVKRLPCKHYYHGECIIPWLGIRNTCPVCRHELPTDD 339
>AT5G54990.1 | Symbols: | RING/U-box superfamily protein |
chr5:22317505-22318185 FORWARD LENGTH=226
Length = 226
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 252 ECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCK 294
+C ICL GV +LPC+H FH CI WL+ +CP+C+
Sbjct: 173 DCPICLTELSSGVSRMKLPCSHVFHRDCIMTWLKKNPSCPICR 215
>AT5G43420.1 | Symbols: | RING/U-box superfamily protein |
chr5:17451790-17452917 FORWARD LENGTH=375
Length = 375
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 252 ECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCK 294
EC +CL + D +L +P C+H FH CI WL+ A CPLC+
Sbjct: 137 ECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCR 180
>AT4G30400.1 | Symbols: | RING/U-box superfamily protein |
chr4:14867068-14868486 FORWARD LENGTH=472
Length = 472
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 252 ECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCK 294
+C +CLC + +L LP C+H FH CI WL + +TCPLC+
Sbjct: 133 DCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCR 176
>AT5G67120.1 | Symbols: | RING/U-box superfamily protein |
chr5:26787830-26789737 REVERSE LENGTH=272
Length = 272
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 23/48 (47%)
Query: 247 DPDDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCK 294
D + C IC D E+ +L C H FH GCI WL CPLC
Sbjct: 221 DDETKRCVICQQKLKDNEEVSKLGCGHDFHFGCIKNWLMVTNKCPLCN 268
>AT2G15580.1 | Symbols: | RING/U-box superfamily protein |
chr2:6797687-6798815 FORWARD LENGTH=196
Length = 196
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 249 DDSECCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNL 297
+ +C ICL + G L LPC H FHS C+ WL T CP C+ ++
Sbjct: 146 EQQDCAICLDRFKKGETLVHLPCAHKFHSICLLPWLDTNVYCPYCRTDI 194
>AT1G04790.1 | Symbols: | RING/U-box superfamily protein |
chr1:1345469-1348143 FORWARD LENGTH=634
Length = 634
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 35/77 (45%)
Query: 218 LLMVHDNKKQLINARNDSCNESHTSEIFLDPDDSECCICLCTYVDGVELYRLPCTHHFHS 277
LL + +N + A + N S + D C ICL T G + LPC H FH
Sbjct: 554 LLALDENNHRHGGASANRINNLPESTVQTDNFQETCVICLETPKIGDTIRHLPCLHKFHK 613
Query: 278 GCISRWLRTKATCPLCK 294
CI WL +CP+CK
Sbjct: 614 DCIDPWLGRSKSCPVCK 630
>AT2G37580.1 | Symbols: | RING/U-box superfamily protein |
chr2:15764745-15765452 FORWARD LENGTH=235
Length = 235
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 237 NESHTSEIFLDPDDSECCICLCTYVDGVELYRLP-CTHHFHSGCISRWLRTKATCPLCKF 295
++H+ EI +EC +CL + D EL +L C H FH CI WL+ CP+C+
Sbjct: 131 KDTHSKEI-----GNECSVCLMVFTDSDELRQLSECKHAFHVLCIETWLKDHPNCPICRT 185
Query: 296 NL 297
++
Sbjct: 186 DV 187
>AT2G44330.1 | Symbols: | RING/U-box superfamily protein |
chr2:18310621-18311163 FORWARD LENGTH=180
Length = 180
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 253 CCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCKFNL 297
C IC +V G RLPC H +H+ CI WL + +CPLC+ L
Sbjct: 96 CAICREDFVVGESARRLPCNHLYHNDCIIPWLTSHNSCPLCRVEL 140
>AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 22/42 (52%)
Query: 253 CCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCK 294
C IC Y G LPC H +HS CIS+WL CP+C
Sbjct: 197 CVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCN 238
>AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 22/42 (52%)
Query: 253 CCICLCTYVDGVELYRLPCTHHFHSGCISRWLRTKATCPLCK 294
C IC Y G LPC H +HS CIS+WL CP+C
Sbjct: 197 CVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCN 238
>AT3G15740.1 | Symbols: | RING/U-box superfamily protein |
chr3:5333879-5334553 REVERSE LENGTH=224
Length = 224
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 233 NDSCNESHTSEIFLDPDDSECCICLCTYVDG--VELYRLPCTHHFHSGCISRWLRTKATC 290
ND E H + ++ ++ C IC+ G VE R+PC+H FH C WLR C
Sbjct: 157 NDEAVEMHLETLVVE-NEGYCVICMDNIRVGSDVEAGRMPCSHVFHRTCGEEWLRNSGIC 215
Query: 291 PLCK 294
P+C+
Sbjct: 216 PVCR 219