Miyakogusa Predicted Gene

Lj1g3v4058610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4058610.1 Non Chatacterized Hit- tr|J3KX11|J3KX11_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G1,32.98,6e-19,Aquaporin-like,Aquaporin-like; MINTRINSICP,Major
intrinsic protein; no description,Aquaporin-like; A,CUFF.31812.1
         (239 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G56950.2 | Symbols: SIP2;1 | small and basic intrinsic protei...   314   4e-86
AT3G56950.1 | Symbols: SIP2;1, SIP2 | small and basic intrinsic ...   313   6e-86
AT5G18290.2 | Symbols: SIP1;2 | Aquaporin-like superfamily prote...    86   2e-17
AT5G18290.1 | Symbols: SIP1;2, SIP1B | Aquaporin-like superfamil...    86   2e-17
AT3G04090.1 | Symbols: SIP1;1, SIP1A | small and basic intrinsic...    86   2e-17
AT5G47450.1 | Symbols: ATTIP2;3, TIP2;3, DELTA-TIP3 | tonoplast ...    47   8e-06

>AT3G56950.2 | Symbols: SIP2;1 | small and basic intrinsic protein
           2;1 | chr3:21078411-21079644 REVERSE LENGTH=260
          Length = 260

 Score =  314 bits (804), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 148/237 (62%), Positives = 190/237 (80%), Gaps = 1/237 (0%)

Query: 4   VGRTRLVVSDFVLSFMWVWSGVLVRIFVFKYLGLGH-DHVGEIVKIVFSVVNMFFFAFLA 62
           +GR  LVV+D VLSFMW+W+GVLV I V   LG    D  GEIV+ +FS+++MF FA+L 
Sbjct: 1   MGRIGLVVTDLVLSFMWIWAGVLVNILVHGVLGFSRTDPSGEIVRYLFSIISMFIFAYLQ 60

Query: 63  KVTRGGAYNPLTVLSGAISGDFSNFIYCLGSRIPAQVLGSIVGVKLLIDTIPEVGRGPRL 122
           + T+GG YNPLT L+  +SG FS+FI+ +  RIP +V+GSI+ VK +I   PE+G+GP+L
Sbjct: 61  QATKGGLYNPLTALAAGVSGGFSSFIFSVFVRIPVEVIGSILAVKHIIHVFPEIGKGPKL 120

Query: 123 NIDIHRGALTEGLLTFAIVSVSLGLATKIPGSFFMKTWISSLSKLTLHILGSDLTGGCMN 182
           N+ IH GALTEG+LTF IV +S+GL  KIPGSFFMKTWI SL+KLTLHILGSDLTGGCMN
Sbjct: 121 NVAIHHGALTEGILTFFIVLLSMGLTRKIPGSFFMKTWIGSLAKLTLHILGSDLTGGCMN 180

Query: 183 PAAVMGWAYARGDHITREHILVYWLAPIEATILAVWTFKLLVPPVKEDKTGSKSKSD 239
           PAAVMGWAYARG+HIT+EH+LVYWL P++AT+LAVW FK++  P+ E++   K+KS+
Sbjct: 181 PAAVMGWAYARGEHITKEHLLVYWLGPVKATLLAVWFFKVVFKPLTEEQEKPKAKSE 237


>AT3G56950.1 | Symbols: SIP2;1, SIP2 | small and basic intrinsic
           protein 2;1 | chr3:21078586-21079644 REVERSE LENGTH=237
          Length = 237

 Score =  313 bits (802), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 148/237 (62%), Positives = 190/237 (80%), Gaps = 1/237 (0%)

Query: 4   VGRTRLVVSDFVLSFMWVWSGVLVRIFVFKYLGLGH-DHVGEIVKIVFSVVNMFFFAFLA 62
           +GR  LVV+D VLSFMW+W+GVLV I V   LG    D  GEIV+ +FS+++MF FA+L 
Sbjct: 1   MGRIGLVVTDLVLSFMWIWAGVLVNILVHGVLGFSRTDPSGEIVRYLFSIISMFIFAYLQ 60

Query: 63  KVTRGGAYNPLTVLSGAISGDFSNFIYCLGSRIPAQVLGSIVGVKLLIDTIPEVGRGPRL 122
           + T+GG YNPLT L+  +SG FS+FI+ +  RIP +V+GSI+ VK +I   PE+G+GP+L
Sbjct: 61  QATKGGLYNPLTALAAGVSGGFSSFIFSVFVRIPVEVIGSILAVKHIIHVFPEIGKGPKL 120

Query: 123 NIDIHRGALTEGLLTFAIVSVSLGLATKIPGSFFMKTWISSLSKLTLHILGSDLTGGCMN 182
           N+ IH GALTEG+LTF IV +S+GL  KIPGSFFMKTWI SL+KLTLHILGSDLTGGCMN
Sbjct: 121 NVAIHHGALTEGILTFFIVLLSMGLTRKIPGSFFMKTWIGSLAKLTLHILGSDLTGGCMN 180

Query: 183 PAAVMGWAYARGDHITREHILVYWLAPIEATILAVWTFKLLVPPVKEDKTGSKSKSD 239
           PAAVMGWAYARG+HIT+EH+LVYWL P++AT+LAVW FK++  P+ E++   K+KS+
Sbjct: 181 PAAVMGWAYARGEHITKEHLLVYWLGPVKATLLAVWFFKVVFKPLTEEQEKPKAKSE 237


>AT5G18290.2 | Symbols: SIP1;2 | Aquaporin-like superfamily protein
           | chr5:6055198-6056407 REVERSE LENGTH=243
          Length = 243

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 98/186 (52%), Gaps = 7/186 (3%)

Query: 53  VNMFFFAFLAKVTRGGAYNPLTVLSGAISGDFSNFIYCLGSRIPAQVLGSIVGVKLLIDT 112
           V++  F  +  V  G ++NP    +   +G  S+ ++ L  R PAQ +G+  G   +++ 
Sbjct: 54  VSISIFTVIGNVLGGASFNPCGNAAFYTAGVSSDSLFSLAIRSPAQAIGAAGGAITIMEM 113

Query: 113 IPE-----VGRGPRLNIDIHRGALTEGLLTFAIVSVSLGLATKIPGSFFMKTWISSLSKL 167
           IPE     +G  P L    H GA++E +L+F++  + L +  + P     KT++ +L+ +
Sbjct: 114 IPEKYKTRIGGKPSLQFGAHNGAISEVVLSFSVTFLVLLIILRGPRKLLAKTFLLALATV 173

Query: 168 TLHILGSDLTGGCMNPAAVMGWAYARGDHITREHILVYWLAPIEATILAVWTFKLL--VP 225
           ++ ++GS  T   MNPA   GWAY    H T +H  VYW++     IL+   F+++   P
Sbjct: 174 SVFVVGSKFTRPFMNPAIAFGWAYIYKSHNTWDHFYVYWISSYTGAILSAMLFRIIFPAP 233

Query: 226 PVKEDK 231
           P+ + K
Sbjct: 234 PLVQKK 239


>AT5G18290.1 | Symbols: SIP1;2, SIP1B | Aquaporin-like superfamily
           protein | chr5:6055198-6056407 REVERSE LENGTH=243
          Length = 243

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 98/186 (52%), Gaps = 7/186 (3%)

Query: 53  VNMFFFAFLAKVTRGGAYNPLTVLSGAISGDFSNFIYCLGSRIPAQVLGSIVGVKLLIDT 112
           V++  F  +  V  G ++NP    +   +G  S+ ++ L  R PAQ +G+  G   +++ 
Sbjct: 54  VSISIFTVIGNVLGGASFNPCGNAAFYTAGVSSDSLFSLAIRSPAQAIGAAGGAITIMEM 113

Query: 113 IPE-----VGRGPRLNIDIHRGALTEGLLTFAIVSVSLGLATKIPGSFFMKTWISSLSKL 167
           IPE     +G  P L    H GA++E +L+F++  + L +  + P     KT++ +L+ +
Sbjct: 114 IPEKYKTRIGGKPSLQFGAHNGAISEVVLSFSVTFLVLLIILRGPRKLLAKTFLLALATV 173

Query: 168 TLHILGSDLTGGCMNPAAVMGWAYARGDHITREHILVYWLAPIEATILAVWTFKLL--VP 225
           ++ ++GS  T   MNPA   GWAY    H T +H  VYW++     IL+   F+++   P
Sbjct: 174 SVFVVGSKFTRPFMNPAIAFGWAYIYKSHNTWDHFYVYWISSYTGAILSAMLFRIIFPAP 233

Query: 226 PVKEDK 231
           P+ + K
Sbjct: 234 PLVQKK 239


>AT3G04090.1 | Symbols: SIP1;1, SIP1A | small and basic intrinsic
           protein 1A | chr3:1072340-1074031 REVERSE LENGTH=240
          Length = 240

 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 5/224 (2%)

Query: 3   MVGRTRLVVSDFVLSFMWVWSGVLVRIFVFKYLGLGHDHVGEIVKIVFSVVNMFFFAFLA 62
           M+G  +  + D +++F WV       I     +  G         +V     +F +  + 
Sbjct: 1   MMGVLKSAIGDMLMTFSWVVLSATFGIQTAAIISAGDFQAITWAPLVILTSLIFVYVSIF 60

Query: 63  KVTRGGA-YNPLTVLSGAISGDFSNFIYCLGSRIPAQVLGSIVGVKLLIDTIPEVGR--- 118
            V  G A +NP    +  ++G   + ++ L  R+PAQ +G+  G   +++ IPE  +   
Sbjct: 61  TVIFGSASFNPTGSAAFYVAGVPGDTLFSLAIRLPAQAIGAAGGALAIMEFIPEKYKHMI 120

Query: 119 -GPRLNIDIHRGALTEGLLTFAIVSVSLGLATKIPGSFFMKTWISSLSKLTLHILGSDLT 177
            GP L +D+H GA+ E +L+F I    L +  + P     KT++ +L+ ++  + GS  T
Sbjct: 121 GGPSLQVDVHTGAIAETILSFGITFAVLLIILRGPRRLLAKTFLLALATISFVVAGSKYT 180

Query: 178 GGCMNPAAVMGWAYARGDHITREHILVYWLAPIEATILAVWTFK 221
           G  MNPA   GWAY    H T +HI VYW++     + A   F+
Sbjct: 181 GPAMNPAIAFGWAYMYSSHNTWDHIYVYWISSFVGALSAALLFR 224


>AT5G47450.1 | Symbols: ATTIP2;3, TIP2;3, DELTA-TIP3 | tonoplast
           intrinsic protein 2;3 | chr5:19248509-19249466 REVERSE
           LENGTH=250
          Length = 250

 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 21/224 (9%)

Query: 4   VGRTRLVVSDFVLSFMWVWSGVLVRIFVFKYLGLGH-DHVGEIVKIVFSVVNMFFFAFLA 62
           V   +  +S+F+ + ++V++GV   +   K    G  D  G +   +     +F    +A
Sbjct: 15  VSSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGALDPAGLVAIAIAHAFALFVGVSIA 74

Query: 63  KVTRGGAYNPLTVLSGAISGDFS---NFIYCLGSRIPAQVLGSIVGVKLLI-----DTIP 114
               GG  NP   L  AI G+ +    F Y +     AQ LGSIV   LL+      ++P
Sbjct: 75  ANISGGHLNPAVTLGLAIGGNITLITGFFYWI-----AQCLGSIVACLLLVFVTNGKSVP 129

Query: 115 EVGRGPRLNIDIHRGALTEGLLTFAIV-SVSLGLATKIPGSFFMKTWISSLSKLTLHILG 173
               G    +    G + E ++TFA+V +V    A    GS      I+    +  +IL 
Sbjct: 130 T--HGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILA 187

Query: 174 SD-LTGGCMNPAAVMGWAYARGDHITREHILVYWLAPIEATILA 216
           +   +GG MNPA   G A   GD      I +YW+ P+    LA
Sbjct: 188 AGPFSGGSMNPARSFGPAVVSGD---LSQIWIYWVGPLVGGALA 228