Miyakogusa Predicted Gene

Lj1g3v4058560.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4058560.1 tr|F2SV77|F2SV77_TRIRC PQ loop repeat protein
OS=Trichophyton rubrum (strain ATCC MYA-4607 / CBS
118,24.53,2e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; PQ-loop,NULL; Repeated motif present betw,CUFF.32021.1
         (385 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G41050.1 | Symbols:  | PQ-loop repeat family protein / transm...   353   8e-98
AT4G36850.1 | Symbols:  | PQ-loop repeat family protein / transm...   258   6e-69
AT4G20100.1 | Symbols:  | PQ-loop repeat family protein / transm...   164   1e-40

>AT2G41050.1 | Symbols:  | PQ-loop repeat family protein /
           transmembrane family protein | chr2:17123388-17125622
           REVERSE LENGTH=376
          Length = 376

 Score =  353 bits (907), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 186/363 (51%), Positives = 240/363 (66%), Gaps = 11/363 (3%)

Query: 20  SSVRETASLTLGAVSVFVWVVAEIPQIITNYRTKSAEGLSVIFLITWIIGDLFNLFGCLL 79
           SS R+  SL+LG +SV  W VAEIPQI+TNY  KS EGLS+ FL TW+IGD+FNL GCL+
Sbjct: 5   SSFRDGLSLSLGIISVISWGVAEIPQIMTNYSEKSTEGLSITFLTTWMIGDIFNLLGCLM 64

Query: 80  EPATIPTQLYTAVLYTVITVALGSQHIYYGYVYPQLKYKRQ--LEAETLTKVEQVEKVRD 137
           EPAT+PTQ Y A+LYTV T  L  Q IYYG++YP+LK +R   +EAE ++ +  +  V+ 
Sbjct: 65  EPATLPTQFYMALLYTVTTSVLYVQSIYYGHIYPRLKNRRDQMVEAERISNI--ISDVKI 122

Query: 138 AEQSKEFDYFNRGTGRSSPISLPAPPQRIS-TGRELFYQSARYLSRSHTPTAGSILAQRM 196
             + +         G+++PI++    QR S TGRELFY SAR LS SHTP AGS+LAQRM
Sbjct: 123 PGRWRNSSDTTTCGGQTTPITMIPGSQRTSFTGRELFYTSARSLSSSHTPPAGSVLAQRM 182

Query: 197 APSSLNLDSIHENLLGSAAATQSAPALKIKTTFCIRSALTFLGAINLHQSLDKRINPIFS 256
           A    +  ++ E LL       S      K+  C+ S   FLG  NL   L +       
Sbjct: 183 A-RGYSEPTLEEPLLPEDVTHPST-----KSLLCVVSVFLFLGTFNLPNLLSESRTMALG 236

Query: 257 NPRQQFVIYVGRKLFQVSWDRLSENGESGNNSIGTFLGWAMTFMYMGGRLPQILLNIRRG 316
              + FV+   RKL QV+   ++E+    ++ IG FLGWAM  +YMGGRLPQI LN+RRG
Sbjct: 237 EGDRVFVVRAARKLLQVTSSNVAEHSGGESSRIGMFLGWAMAAIYMGGRLPQICLNMRRG 296

Query: 317 HVQGLSPFMFLFALIGNATYVASILVISLDWSRIGPNLPWLVDAGGCVLLDSFILMQFIY 376
           HV+GL+P MF FAL+GN TYVASILV S++W ++ PNLPWLVDAGGCV+LD  IL+QF +
Sbjct: 297 HVEGLNPLMFFFALVGNMTYVASILVNSVEWLKLAPNLPWLVDAGGCVVLDFLILLQFFH 356

Query: 377 FRC 379
           FRC
Sbjct: 357 FRC 359


>AT4G36850.1 | Symbols:  | PQ-loop repeat family protein /
           transmembrane family protein | chr4:17353415-17355822
           REVERSE LENGTH=392
          Length = 392

 Score =  258 bits (658), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 154/385 (40%), Positives = 215/385 (55%), Gaps = 29/385 (7%)

Query: 7   ESSTLSLWTKMH----LSSVRETASLTLGAVSVFVWVVAEIPQIITNYRTKSAEGLSVIF 62
           E  T   W +++    L ++ +  S  LG  S+  W VAEIPQ+ITN+RTKS+ G+S+ F
Sbjct: 10  EKKTCVRWVEIYFDDCLCNLNDDVSFALGIASLLCWGVAEIPQVITNFRTKSSNGVSLSF 69

Query: 63  LITWIIGDLFNLFGCLLEPATIPTQLYTAVLYTVITVALGSQHIYYGYVYPQLKYKRQLE 122
           L+ W+ GD+FNL GCLLEPAT+PTQ YTA+LYTV TV L  Q IYY Y+Y   +++R   
Sbjct: 70  LLAWVAGDIFNLVGCLLEPATLPTQFYTALLYTVSTVVLVIQTIYYDYIYKLCRHRR--- 126

Query: 123 AETLTKVEQVEKVRDAEQSKEFDYFNRGTGRSSPISLPAPPQRISTGRELFYQSARYLSR 182
            +   K E+ E+ R  +  K            S IS+P    + S+ RE +Y SAR L+ 
Sbjct: 127 TKICQKDEEDEEKRPLKPPKTM---------GSAISIPGGSYKDSSRREFYYTSARSLAG 177

Query: 183 SHTP--TAGSILAQRMAPSSLNLDSIHENLLGSAAATQSAPALKIKTTFCIRSALTFLGA 240
           S TP          +  PS+L +D+   +         + P +  KT       +T    
Sbjct: 178 SGTPPLRTSYFRVAKSGPSALAIDNDGSS-SDEDETMSTCPVITAKT-------ITKPRP 229

Query: 241 INLHQSLDKRINPIFSNPRQQFVIYVGRKLFQVSWDRLSENGESGNNSIGTFLGWAMTFM 300
           I         +    S P Q   +    K    S  RL       ++++G +LGW M  +
Sbjct: 230 IPRQAGFGTFLAASASLPLQAKSL--AEKYAHASSRRLLNERIVEHSALGQWLGWLMAAI 287

Query: 301 YMGGRLPQILLNIRRGHVQGLSPFMFLFALIGNATYVASILVISLDWSRIGPNLPWLVDA 360
           YMGGR+PQI LNI+RG V+GL+P MF+FAL+ NATYV SILV + +W  I PNLPWL+DA
Sbjct: 288 YMGGRIPQIWLNIKRGSVEGLNPLMFIFALVANATYVGSILVRTTEWDNIKPNLPWLLDA 347

Query: 361 GGCVLLDSFILMQFIYFR-CWTSSL 384
             CV+LD FI++Q+IY++ C   SL
Sbjct: 348 IVCVVLDLFIILQYIYYKYCRIKSL 372


>AT4G20100.1 | Symbols:  | PQ-loop repeat family protein /
           transmembrane family protein | chr4:10873999-10874865
           REVERSE LENGTH=288
          Length = 288

 Score =  164 bits (415), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 90/182 (49%), Positives = 113/182 (62%), Gaps = 25/182 (13%)

Query: 205 SIHENLLGSAAATQSAPALKIKTTFCIRSALTFLGAINL---HQSLDKRINPIFSNPRQQ 261
            + E LL   A   S      K+  C+ S   FLG+ N+    +S+D R         + 
Sbjct: 106 DVEEPLLREEAKRPST-----KSLLCVVSVFLFLGSFNVLSGSRSMDLR--------GKD 152

Query: 262 FVIYVG----RKLFQVSWDRLSENGESGNNSIGTFLGWAMTFMYMGGRLPQILLNIRRGH 317
            V  VG    RKL +VS   L EN     N+IG +LGWAM  +YMGGRLPQI +N+RRG+
Sbjct: 153 RVFVVGGAGARKLLEVSSGNLGEN-----NNIGMWLGWAMAAIYMGGRLPQICMNVRRGN 207

Query: 318 VQGLSPFMFLFALIGNATYVASILVISLDWSRIGPNLPWLVDAGGCVLLDSFILMQFIYF 377
           V+GL+P MF FA IGN TYVASILV S++WS+I PNLPWLVD+GGC +LD  IL+QF YF
Sbjct: 208 VEGLNPLMFFFAFIGNVTYVASILVNSVEWSKIEPNLPWLVDSGGCAVLDFLILLQFFYF 267

Query: 378 RC 379
            C
Sbjct: 268 HC 269



 Score =  129 bits (325), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 57/99 (57%), Positives = 77/99 (77%)

Query: 22  VRETASLTLGAVSVFVWVVAEIPQIITNYRTKSAEGLSVIFLITWIIGDLFNLFGCLLEP 81
           +R+  SL+LG +SV  W VAEIPQI+TNY  KS EG+S+ FL TW++GD+FN+ GCL+EP
Sbjct: 2   IRDDLSLSLGIISVISWSVAEIPQIMTNYNQKSIEGVSITFLTTWMLGDIFNVVGCLMEP 61

Query: 82  ATIPTQLYTAVLYTVITVALGSQHIYYGYVYPQLKYKRQ 120
           A++P Q YTAVLYT+ T+ L  Q IYYG++YP+L   R+
Sbjct: 62  ASLPVQFYTAVLYTLATLVLYVQSIYYGHIYPRLMKNRR 100