Miyakogusa Predicted Gene

Lj1g3v4058490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4058490.1 Non Chatacterized Hit- tr|I3T4V1|I3T4V1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.62,0,HIT-like,HIT-like domain; HIT_2,Histidine triad (HIT)
protein; no description,HIT-like domain; HIT_1,CUFF.31810.1
         (145 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G56490.1 | Symbols: HIT3, HINT1 | HIS triad family protein 3 ...   232   5e-62
AT1G31160.1 | Symbols: HINT 2 | HISTIDINE TRIAD NUCLEOTIDE-BINDI...   185   8e-48
AT5G48545.1 | Symbols: HINT3 | histidine triad nucleotide-bindin...    54   5e-08

>AT3G56490.1 | Symbols: HIT3, HINT1 | HIS triad family protein 3 |
           chr3:20941532-20943129 FORWARD LENGTH=147
          Length = 147

 Score =  232 bits (592), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 112/132 (84%), Positives = 123/132 (93%), Gaps = 3/132 (2%)

Query: 14  MASEKDAALAATPPSSEYTPTIFDRIINKEIPSTVVYEDDKVLAFRDIAPQAPVHILIIP 73
           MASEK+AALAATP  S   PTIFD+II+KEIPSTVV+EDDKVLAFRDI PQ PVHIL+IP
Sbjct: 19  MASEKEAALAATPSDS---PTIFDKIISKEIPSTVVFEDDKVLAFRDITPQGPVHILLIP 75

Query: 74  KVRDGLTGLSKAEERHFEILGRLLHTAKLVAKQEGLDDGFRIVINDGPKGCQSVYHIHVH 133
           KVRDGLTGLSKAEERH +ILGRLL+TAKLVAKQEGL +GFRIVINDGP+GCQSVYHIHVH
Sbjct: 76  KVRDGLTGLSKAEERHIDILGRLLYTAKLVAKQEGLAEGFRIVINDGPQGCQSVYHIHVH 135

Query: 134 LLGGRQMDWPPG 145
           L+GGRQM+WPPG
Sbjct: 136 LIGGRQMNWPPG 147


>AT1G31160.1 | Symbols: HINT 2 | HISTIDINE TRIAD NUCLEOTIDE-BINDING
           2 | chr1:11122880-11124106 REVERSE LENGTH=187
          Length = 187

 Score =  185 bits (470), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 81/113 (71%), Positives = 100/113 (88%)

Query: 33  PTIFDRIINKEIPSTVVYEDDKVLAFRDIAPQAPVHILIIPKVRDGLTGLSKAEERHFEI 92
           PTIFD+II KEIPS +VYED+ VLAFRDI PQAPVH+L+IPK+RDGLT L KAE RH E+
Sbjct: 75  PTIFDKIIAKEIPSDIVYEDENVLAFRDINPQAPVHVLVIPKLRDGLTSLGKAEPRHVEV 134

Query: 93  LGRLLHTAKLVAKQEGLDDGFRIVINDGPKGCQSVYHIHVHLLGGRQMDWPPG 145
           LG+LLH +K+VA++EG+ DGFR+VIN+G + CQSVYH+H+H+LGGRQM WPPG
Sbjct: 135 LGQLLHASKIVAEKEGILDGFRVVINNGVEACQSVYHLHLHVLGGRQMKWPPG 187


>AT5G48545.1 | Symbols: HINT3 | histidine triad nucleotide-binding 3
           | chr5:19676228-19677945 FORWARD LENGTH=197
          Length = 197

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 10/113 (8%)

Query: 34  TIFDRIINKEIPSTVVYEDDKVLAFRDIAPQAPVHILIIPKVRDGLTGLSKAEERHFEIL 93
            +F +II  E P   +YEDD  L   D  P +  H LIIPK+          EE    ++
Sbjct: 50  CVFCKIIRGESPCLKLYEDDMCLCILDTNPLSHGHSLIIPKLH-----YPTLEETPPSVV 104

Query: 94  GRLLHTAKLVA----KQEGLDDGFRIVINDGPKGCQSVYHIHVHLLGGRQMDW 142
             +     L++    K  G  D F +++N+G    Q ++H H+H++  ++ D 
Sbjct: 105 AAMCSKVPLISNAIVKATG-SDSFNLLVNNGAAAGQVIFHTHIHIIPRKERDC 156