Miyakogusa Predicted Gene

Lj1g3v4047390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4047390.1 Non Chatacterized Hit- tr|B9STU6|B9STU6_RICCO
Mom(Plant), putative OS=Ricinus communis
GN=RCOM_05439,65.91,0.000000002,seg,NULL,CUFF.31898.1
         (462 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family...    52   8e-07
AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family...    52   8e-07

>AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family
           protein | chr1:2501981-2510488 REVERSE LENGTH=2001
          Length = 2001

 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 29/42 (69%)

Query: 421 KAQRSLHLKLKPKIASLCEILLLPDNVKSMVENCLEYTMNNH 462
           ++QR LH  LKPK+A LC++L L D   SMV N LEY + NH
Sbjct: 948 ESQRRLHTVLKPKMAKLCQVLHLSDACTSMVGNFLEYVIENH 989


>AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family
           protein | chr1:2501981-2510488 REVERSE LENGTH=2001
          Length = 2001

 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 29/42 (69%)

Query: 421 KAQRSLHLKLKPKIASLCEILLLPDNVKSMVENCLEYTMNNH 462
           ++QR LH  LKPK+A LC++L L D   SMV N LEY + NH
Sbjct: 948 ESQRRLHTVLKPKMAKLCQVLHLSDACTSMVGNFLEYVIENH 989