Miyakogusa Predicted Gene
- Lj1g3v4037150.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4037150.1 Non Chatacterized Hit- tr|F2UQR7|F2UQR7_SALS5
Putative uncharacterized protein OS=Salpingoeca sp.
(s,31.75,6e-19,FSH1,Serine hydrolase FSH; OVARIAN CANCER GENE-2
PROTEIN-RELATED,NULL; seg,NULL,CUFF.31788.1
(274 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G24380.1 | Symbols: | INVOLVED IN: 10-formyltetrahydrofolate... 214 5e-56
AT5G65400.1 | Symbols: | alpha/beta-Hydrolases superfamily prot... 189 2e-48
AT4G24380.2 | Symbols: | CONTAINS InterPro DOMAIN/s: Serine hyd... 174 6e-44
AT1G09280.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Rhodanese-... 67 2e-11
>AT4G24380.1 | Symbols: | INVOLVED IN: 10-formyltetrahydrofolate
biosynthetic process, folic acid and derivative
biosynthetic process; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST
Arabidopsis thaliana protein match is:
alpha/beta-Hydrolases superfamily protein
(TAIR:AT5G65400.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
0; Other Eukaryotes - 2996 (source: NCBI BLink). |
chr4:12612554-12613586 FORWARD LENGTH=234
Length = 234
Score = 214 bits (545), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 143/224 (63%), Gaps = 4/224 (1%)
Query: 6 GRKLKILCLHGFRTSGSFLKKQISKWDPSIFSQFDLEFPDGKFPAGGKSDIEGIFPPPYF 65
RK + LCLHGFRTSG +K Q+ KW S+ + DL F D FP GKSD+EGIF PPY+
Sbjct: 9 ARKPRFLCLHGFRTSGEIMKIQLHKWPKSVIDRLDLVFLDAPFPCQGKSDVEGIFDPPYY 68
Query: 66 EWFQFNKEFTEYTNLDECISYLCEYITANGPFDGFLGFSQGATLSALLIGYQAQGKLLKE 125
EWFQFNKEFTEYTN ++C+ YL + + GPFDG +GFSQGA LS L G QA+G ++
Sbjct: 69 EWFQFNKEFTEYTNFEKCLEYLEDRMIKLGPFDGLIGFSQGAILSGGLPGLQAKGIAFQK 128
Query: 126 HPPIKFFVSISGSKFRDPTICNVAYKDPIKAKSVHFIGEKDWLKLPSEELASAFHKSLLI 185
P IKF + I G+K + + AY ++ S+HF+GE D+LK +L ++ +++
Sbjct: 129 VPKIKFVIIIGGAKLKSAKLAENAYSSSLETLSLHFLGETDFLKPYGTQLIESYKNPVVV 188
Query: 186 RHPQGHTVPRLDEVSTGQLRDWVAG----ILGEPKDGEPKDGVP 225
HP+GHTVPRLDE S ++ ++ ++ E K+GE P
Sbjct: 189 HHPKGHTVPRLDEKSLEKVTAFIDTLEHLVMEEDKNGEENTSKP 232
>AT5G65400.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr5:26131448-26133062 FORWARD LENGTH=252
Length = 252
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/193 (49%), Positives = 128/193 (66%), Gaps = 5/193 (2%)
Query: 10 KILCLHGFRTSGSFLKKQISKWDPSIFSQFDLEFPDGKFPAGGKSDIEGIFPPPYFEWFQ 69
+ILCLHGFRTSG L+ I KW +I DL+F D FPA GKSD+E F PPY+EW+Q
Sbjct: 31 RILCLHGFRTSGRILQAGIGKWPDTILRDLDLDFLDAPFPATGKSDVERFFDPPYYEWYQ 90
Query: 70 FNKEFTEYTNLDECISYLCEYITANGPFDGFLGFSQGATLSALLIGYQAQGKLLKEHPPI 129
NK F EY N +EC++Y+ +Y+ NGPFDG LGFSQGA L+A + G Q QG L + P +
Sbjct: 91 ANKGFKEYRNFEECLAYIEDYMIKNGPFDGLLGFSQGAFLTAAIPGMQEQGSALTKVPKV 150
Query: 130 KFFVSISGSK-----FRDPTICNVAYKDPIKAKSVHFIGEKDWLKLPSEELASAFHKSLL 184
KF V ISG+K F +P A+ P++ S+HFIGE+D+LK+ E L +F + ++
Sbjct: 151 KFLVIISGAKIPGLMFGEPKAAVNAFSSPVRCPSLHFIGERDFLKIEGEVLVESFVEPVV 210
Query: 185 IRHPQGHTVPRLD 197
I H GH +P+LD
Sbjct: 211 IHHSGGHIIPKLD 223
>AT4G24380.2 | Symbols: | CONTAINS InterPro DOMAIN/s: Serine
hydrolase (InterPro:IPR005645); BEST Arabidopsis
thaliana protein match is: alpha/beta-Hydrolases
superfamily protein (TAIR:AT5G65400.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants -
531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
BLink). | chr4:12612554-12613310 FORWARD LENGTH=171
Length = 171
Score = 174 bits (441), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 106/158 (67%)
Query: 6 GRKLKILCLHGFRTSGSFLKKQISKWDPSIFSQFDLEFPDGKFPAGGKSDIEGIFPPPYF 65
RK + LCLHGFRTSG +K Q+ KW S+ + DL F D FP GKSD+EGIF PPY+
Sbjct: 9 ARKPRFLCLHGFRTSGEIMKIQLHKWPKSVIDRLDLVFLDAPFPCQGKSDVEGIFDPPYY 68
Query: 66 EWFQFNKEFTEYTNLDECISYLCEYITANGPFDGFLGFSQGATLSALLIGYQAQGKLLKE 125
EWFQFNKEFTEYTN ++C+ YL + + GPFDG +GFSQGA LS L G QA+G ++
Sbjct: 69 EWFQFNKEFTEYTNFEKCLEYLEDRMIKLGPFDGLIGFSQGAILSGGLPGLQAKGIAFQK 128
Query: 126 HPPIKFFVSISGSKFRDPTICNVAYKDPIKAKSVHFIG 163
P IKF + I G+K + + AY ++ S+HF+G
Sbjct: 129 VPKIKFVIIIGGAKLKSAKLAENAYSSSLETLSLHFLG 166
>AT1G09280.1 | Symbols: | CONTAINS InterPro DOMAIN/s:
Rhodanese-like (InterPro:IPR001763), Serine hydrolase
(InterPro:IPR005645); BEST Arabidopsis thaliana protein
match is: Rhodanese/Cell cycle control phosphatase
superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast
hits to 5912 proteins in 1592 species: Archae - 0;
Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants -
229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI
BLink). | chr1:2998209-3001253 REVERSE LENGTH=581
Length = 581
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 91/221 (41%), Gaps = 41/221 (18%)
Query: 7 RKLKILCLHGFRTSGSFLKKQISKWDPSIFSQFDLEFPDG-------------------- 46
RKL+ILCLHGFR + S K + + + +L F D
Sbjct: 352 RKLRILCLHGFRQNASSFKGRTGSLAKKLKNIAELVFIDAPHELQFIYQTATPPSGVCNK 411
Query: 47 KFPAGGKSDIEGIFPPPYFEWFQFNKEF------TEYTNLDECISYLCEYITANGPFDGF 100
KF SD + P W +F T+ D+ ++YL GPFDG
Sbjct: 412 KFAWLVSSDFD---KPSETGWTVAQCQFDPLQYQTQTEGFDKSLTYLKTAFEEKGPFDGI 468
Query: 101 LGFSQGATLSALLIGYQAQGKLLKEHPPIKFFVSISGSKFRDPTICNVAYKDPIKAKSVH 160
LGFSQGA ++A + G Q Q L+ E I F + S F + + K IK S+H
Sbjct: 469 LGFSQGAAMAAAVCGKQEQ--LVGE---IDFRFCVLCSGFTPWPLLEMKEKRSIKCPSLH 523
Query: 161 FIG-----EKDWLKLPSEELASAFHK--SLLIRHPQGHTVP 194
G ++ + S +LA F + ++ H GH +P
Sbjct: 524 IFGSQPGKDRQIVTQASSDLAGLFEDGCATIVEHDFGHIIP 564