Miyakogusa Predicted Gene

Lj1g3v4027120.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4027120.1 CUFF.31782.1
         (430 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G40980.1 | Symbols:  | Protein kinase superfamily protein | c...   619   e-177

>AT2G40980.1 | Symbols:  | Protein kinase superfamily protein |
           chr2:17102090-17104443 FORWARD LENGTH=617
          Length = 617

 Score =  619 bits (1595), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 286/378 (75%), Positives = 333/378 (88%), Gaps = 2/378 (0%)

Query: 49  GMPKNSIEDLAADHSSRLQARRIERHLGDATVNENGLFRYQQRSVSPEIVEVQDDPVKID 108
           G P++SIEDLAADHSSRL +RR ER LGD +++ENG+FR+QQ ++SPEIVEVQ++  KI+
Sbjct: 238 GAPRHSIEDLAADHSSRLHSRRQERQLGDTSLSENGMFRFQQSTMSPEIVEVQEESTKIE 297

Query: 109 SKESMKLEEGSMLWLEDSDWQKGYQIKEVINTGEFTYYIASNVEDPGKNLFLYVGSHPSQ 168
            + SMKLE GS+LWLE+S++QKGYQI E++  G   Y+IAS V+D GK++FLYVGS PSQ
Sbjct: 298 PEPSMKLEVGSVLWLEESNYQKGYQINEILTNGTLPYHIASPVDDAGKSVFLYVGSPPSQ 357

Query: 169 LEPAWEDMNLWYQVQRQTKVLTIMKQKGLSCKYLPQLSASGRIIHPGHCRRPSSGGNCDH 228
           LEPAWEDMNLWYQVQRQTK+L+IMKQ+GLS KYLPQL  SGRIIHPG C++PSSGG CDH
Sbjct: 358 LEPAWEDMNLWYQVQRQTKILSIMKQRGLSSKYLPQLHGSGRIIHPGQCQKPSSGGRCDH 417

Query: 229 PWCGTPVLVTSPVGETVAEMVRTGQFGPDEAIKCCHDCXXXXXXXXXXGIRHGDIRPENV 288
           PWCGTP+LVT+PVGETVA++V  G+FGP+EAI+CCHDC          GIRHGDIRPENV
Sbjct: 418 PWCGTPILVTTPVGETVADLVNEGRFGPEEAIRCCHDCLSALSSSSSAGIRHGDIRPENV 477

Query: 289 ICVKSGVRHPYFVLIGWGHAILEDRDRPAMNLHFSSTYALQEGKLCSASDAESLVYMLYF 348
           + V SGVRHPYFVLIGWGHA+LEDRDRPAMNLHFSSTYALQEGKLC+ASDAESL+YMLYF
Sbjct: 478 VYVTSGVRHPYFVLIGWGHAVLEDRDRPAMNLHFSSTYALQEGKLCAASDAESLIYMLYF 537

Query: 349 SCGGGFPDLDSVEGALQWRETSWSRRSIQQKLGDISTVLKAFADYVDSLCGTPYPMDYEI 408
            C G FP+LDSVEGALQWRETSWS+R IQQKLGDISTVLKAF+DYVDSLCGTPYP+DY+I
Sbjct: 538 -CSGDFPELDSVEGALQWRETSWSKRLIQQKLGDISTVLKAFSDYVDSLCGTPYPLDYDI 596

Query: 409 WLRRLRRNIHEEDHGKEI 426
           WLRRL+RN+  EDHGKEI
Sbjct: 597 WLRRLKRNL-SEDHGKEI 613