Miyakogusa Predicted Gene

Lj1g3v4027090.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4027090.2 Non Chatacterized Hit- tr|A9P0B1|A9P0B1_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,60.24,6e-19,seg,NULL,CUFF.31781.2
         (225 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G27110.3 | Symbols: FRS3 | FAR1-related sequence 3 | chr2:115...    94   6e-20
AT2G27110.2 | Symbols: FRS3 | FAR1-related sequence 3 | chr2:115...    94   7e-20
AT2G27110.1 | Symbols: FRS3 | FAR1-related sequence 3 | chr2:115...    94   7e-20

>AT2G27110.3 | Symbols: FRS3 | FAR1-related sequence 3 |
           chr2:11576969-11580259 REVERSE LENGTH=706
          Length = 706

 Score = 94.4 bits (233), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 56/126 (44%), Positives = 74/126 (58%), Gaps = 8/126 (6%)

Query: 97  WPRQDPDSLAQMNQSDFGISTPLVADCNVSGL-PACFQCDVAPFENSENLPFLKSMTWTM 155
           WPRQD + + + N +D G     V+D N+  + P     D    EN   LP LKS+TW M
Sbjct: 528 WPRQD-EMIRRFNLNDGGARAQSVSDLNLPRMAPVSLHRDDTAPENMVALPCLKSLTWGM 586

Query: 156 ENRGSSPADRVAIITLKLHDRSKSSLGEKEVKFQITRDTLEAMLTSMTYISEQLSAVGTS 215
           E++ + P  RVA+I LKLHD  K    + +VKFQ++  TLE ML SM YISEQLS+    
Sbjct: 587 ESKNTMPGGRVAVINLKLHDYRKFPSADMDVKFQLSSVTLEPMLRSMAYISEQLSS---- 642

Query: 216 SGPANK 221
             PAN+
Sbjct: 643 --PANR 646


>AT2G27110.2 | Symbols: FRS3 | FAR1-related sequence 3 |
           chr2:11576969-11580405 REVERSE LENGTH=851
          Length = 851

 Score = 94.0 bits (232), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 56/126 (44%), Positives = 74/126 (58%), Gaps = 8/126 (6%)

Query: 97  WPRQDPDSLAQMNQSDFGISTPLVADCNVSGL-PACFQCDVAPFENSENLPFLKSMTWTM 155
           WPRQD + + + N +D G     V+D N+  + P     D    EN   LP LKS+TW M
Sbjct: 673 WPRQD-EMIRRFNLNDGGARAQSVSDLNLPRMAPVSLHRDDTAPENMVALPCLKSLTWGM 731

Query: 156 ENRGSSPADRVAIITLKLHDRSKSSLGEKEVKFQITRDTLEAMLTSMTYISEQLSAVGTS 215
           E++ + P  RVA+I LKLHD  K    + +VKFQ++  TLE ML SM YISEQLS+    
Sbjct: 732 ESKNTMPGGRVAVINLKLHDYRKFPSADMDVKFQLSSVTLEPMLRSMAYISEQLSS---- 787

Query: 216 SGPANK 221
             PAN+
Sbjct: 788 --PANR 791


>AT2G27110.1 | Symbols: FRS3 | FAR1-related sequence 3 |
           chr2:11576969-11580405 REVERSE LENGTH=851
          Length = 851

 Score = 94.0 bits (232), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 56/126 (44%), Positives = 74/126 (58%), Gaps = 8/126 (6%)

Query: 97  WPRQDPDSLAQMNQSDFGISTPLVADCNVSGL-PACFQCDVAPFENSENLPFLKSMTWTM 155
           WPRQD + + + N +D G     V+D N+  + P     D    EN   LP LKS+TW M
Sbjct: 673 WPRQD-EMIRRFNLNDGGARAQSVSDLNLPRMAPVSLHRDDTAPENMVALPCLKSLTWGM 731

Query: 156 ENRGSSPADRVAIITLKLHDRSKSSLGEKEVKFQITRDTLEAMLTSMTYISEQLSAVGTS 215
           E++ + P  RVA+I LKLHD  K    + +VKFQ++  TLE ML SM YISEQLS+    
Sbjct: 732 ESKNTMPGGRVAVINLKLHDYRKFPSADMDVKFQLSSVTLEPMLRSMAYISEQLSS---- 787

Query: 216 SGPANK 221
             PAN+
Sbjct: 788 --PANR 791