Miyakogusa Predicted Gene

Lj1g3v4027080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4027080.1 Non Chatacterized Hit- tr|I1INQ4|I1INQ4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,33.22,2e-18,coiled-coil,NULL; seg,NULL,CUFF.31785.1
         (288 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G10060.1 | Symbols:  | ENTH/VHS family protein | chr5:3145994...    58   8e-09
AT5G65180.2 | Symbols:  | ENTH/VHS family protein | chr5:2604647...    49   3e-06
AT5G65180.1 | Symbols:  | ENTH/VHS family protein | chr5:2604562...    49   4e-06

>AT5G10060.1 | Symbols:  | ENTH/VHS family protein |
           chr5:3145994-3148049 REVERSE LENGTH=469
          Length = 469

 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 44/54 (81%)

Query: 1   MEQLENAGAARASLLSQLKDALQEQESRQEHVHAQLQVVRDQIEKAAGIKKRLN 54
           +E+L++   +R+SL++QLKDAL+EQES  +++ AQ+QV ++Q E+A  ++KRLN
Sbjct: 238 IEKLKSVQGSRSSLVNQLKDALREQESELDNLKAQIQVAKEQTEEAQNMQKRLN 291


>AT5G65180.2 | Symbols:  | ENTH/VHS family protein |
           chr5:26046478-26047806 FORWARD LENGTH=311
          Length = 311

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 41/53 (77%)

Query: 1   MEQLENAGAARASLLSQLKDALQEQESRQEHVHAQLQVVRDQIEKAAGIKKRL 53
           +E+L++   +R SL++ L++AL+EQES  E++ +Q+QV ++Q E+A  ++KRL
Sbjct: 108 VEKLKSVEESRTSLVNHLREALREQESELENLQSQIQVAQEQTEEAQNMQKRL 160


>AT5G65180.1 | Symbols:  | ENTH/VHS family protein |
           chr5:26045625-26047806 FORWARD LENGTH=439
          Length = 439

 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 41/53 (77%)

Query: 1   MEQLENAGAARASLLSQLKDALQEQESRQEHVHAQLQVVRDQIEKAAGIKKRL 53
           +E+L++   +R SL++ L++AL+EQES  E++ +Q+QV ++Q E+A  ++KRL
Sbjct: 236 VEKLKSVEESRTSLVNHLREALREQESELENLQSQIQVAQEQTEEAQNMQKRL 288