Miyakogusa Predicted Gene

Lj1g3v3979350.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3979350.2 tr|O24288|O24288_PEA Polynucleotide phosphorylase
OS=Pisum sativum GN=pnp PE=2 SV=1,81.38,0,K homology RNA-binding
domain,K Homology domain; Ribosomal protein S1-like RNA-binding
domain,RNA-bi,CUFF.31742.2
         (922 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G03710.1 | Symbols: RIF10, PNP | polyribonucleotide nucleotid...  1174   0.0  
AT5G14580.1 | Symbols:  | polyribonucleotide nucleotidyltransfer...   438   e-123
AT2G47220.1 | Symbols: DUF5, ATDUF5 | DOMAIN OF UNKNOWN FUNCTION...   148   2e-35
AT3G46210.6 | Symbols:  | Ribosomal protein S5 domain 2-like sup...    59   2e-08
AT3G46210.5 | Symbols:  | Ribosomal protein S5 domain 2-like sup...    59   2e-08
AT3G46210.4 | Symbols:  | Ribosomal protein S5 domain 2-like sup...    59   2e-08
AT3G46210.3 | Symbols:  | Ribosomal protein S5 domain 2-like sup...    59   2e-08
AT3G46210.2 | Symbols:  | Ribosomal protein S5 domain 2-like sup...    59   2e-08
AT3G46210.1 | Symbols:  | Ribosomal protein S5 domain 2-like sup...    59   2e-08
AT3G61620.2 | Symbols: RRP41 | 3'-5'-exoribonuclease family prot...    57   6e-08
AT3G61620.1 | Symbols: RRP41 | 3'-5'-exoribonuclease family prot...    57   6e-08

>AT3G03710.1 | Symbols: RIF10, PNP | polyribonucleotide
           nucleotidyltransferase, putative | chr3:919542-924906
           FORWARD LENGTH=922
          Length = 922

 Score = 1174 bits (3037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 598/873 (68%), Positives = 680/873 (77%), Gaps = 21/873 (2%)

Query: 58  FAVRASLEDPSVVPESAVDVGA---PQPYSVKIPVGDRHILVETDHIGRQASGSVTVTDG 114
           F+VRA +         +V  G+   P   SVKIP G+R ILVET  +GRQAS +VTVTDG
Sbjct: 60  FSVRALVRPDDTDDADSVGDGSLAFPNHVSVKIPFGNREILVETGLMGRQASSAVTVTDG 119

Query: 115 ETIVYTTVCLDDVPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGKTKDHEVLICRLID 174
           ETIVYT+VCL DVPSEPSDF PL V+YQERFSA GRTSGGFFKREG+TKDHEVLICRLID
Sbjct: 120 ETIVYTSVCLADVPSEPSDFLPLYVHYQERFSAVGRTSGGFFKREGRTKDHEVLICRLID 179

Query: 175 RPLRPSMPKGFYHETQILSWVLSYDGLHSPDSLAVTAAGIAVALSEVPMSKTVAGVRIGL 234
           RPLRP+MPKGFY+ETQILSWVLSYDGLH+PD+LAVT+AGIAVALSEVP +K +AGVR+GL
Sbjct: 180 RPLRPTMPKGFYNETQILSWVLSYDGLHAPDALAVTSAGIAVALSEVPNAKAIAGVRVGL 239

Query: 235 VGDKFLVNPTTEEMENSELDLLLAGTDSAILMIEGYSNFLPEEKLLEAVEVGQDAVRAIC 294
           +G +F+VNPT +EME S+LDL LAGTD+AIL IEGYSNFLPEE LL+AV+VGQDAV+A C
Sbjct: 240 IGGEFIVNPTVKEMEESQLDLFLAGTDTAILTIEGYSNFLPEEMLLQAVKVGQDAVQATC 299

Query: 295 KEVAALVKKCGKPKMFDAIKLPPPELYKHVEEIAGDELVKVLQIRNKIPRRKALSSLEEK 354
             +  L KK GKPKM DAI+LPPPELYKHV+E+AG+EL K LQI++KI RRKA+SSLEEK
Sbjct: 300 IAIEVLAKKYGKPKMLDAIRLPPPELYKHVKELAGEELTKALQIKSKISRRKAISSLEEK 359

Query: 355 VIKILTENGVVTNDATQRSNTETIAXXXXXXXXXXXXXXXXXXXXXXXHIKPTARKPTPL 414
           V+ ILTE G V  D       E                          HI+P  RKP PL
Sbjct: 360 VLTILTEKGYVI-DEVAFGTIEAQPDLLEDEDEDEEVVPEGEVDQGDVHIRPIPRKPIPL 418

Query: 415 -FSEVDVKLVFKEVTSKFLRKRIVEGGKRSDGRKPNEIRPINSRCGLLPRAHGSTLFTRG 473
            FSEVDVKLVFKEV+SK LR+RIVEGGKRSDGR  +EIRPINSRCGLLPRAHGSTLFTRG
Sbjct: 419 LFSEVDVKLVFKEVSSKLLRRRIVEGGKRSDGRTLDEIRPINSRCGLLPRAHGSTLFTRG 478

Query: 474 ETQSLAVVTLGDKQMAQRIDNLMGVDEFKKFYLQYSFPPSCVGEVGRIGAPSRREIGHGM 533
           ETQ+LAVVTLGDKQMAQRIDNL G DE+K+FYLQY+FPPS VGEVGRIGAPSRREIGHG 
Sbjct: 479 ETQALAVVTLGDKQMAQRIDNLEGSDEYKRFYLQYTFPPSSVGEVGRIGAPSRREIGHGT 538

Query: 534 LAERSLEPILPSDKDFPYTIRVESTITESNGSSSMASVCGGCLALQDAGVPIKSAIAGIA 593
           LAER+LE ILPSD DFPYTIRVEST+ ESNGSSSMASVCGGCLALQDAGVP+K ++AGIA
Sbjct: 539 LAERALETILPSDDDFPYTIRVESTVIESNGSSSMASVCGGCLALQDAGVPVKCSVAGIA 598

Query: 594 MGMVLDTKEFGGDGTPLILSDITGSEDASGDMDFKVAGNEHGITAFQMDIKVGGITLPVM 653
           MGMV DT+EFGGDG+PLILSDITG+EDASGDMDFKVAGNE G+TAFQMDIKVGGITL +M
Sbjct: 599 MGMVWDTEEFGGDGSPLILSDITGAEDASGDMDFKVAGNEDGVTAFQMDIKVGGITLEIM 658

Query: 654 REALLQARDGRKHILGEMMNCSPPPAKILSKYAPLIHIMKVRPDKVNLIIGSGGKKVKSI 713
            +AL+QA+ GR+HIL EM  CSPPP   LSKYAPLI IMKV P KV  +IGSGGKKVKSI
Sbjct: 659 EKALIQAKAGRRHILAEMAKCSPPPTLSLSKYAPLILIMKVHPSKVYSLIGSGGKKVKSI 718

Query: 714 IEESGIEAIDTDDNGTVKIFARDLSSLERSKAMISNLTMVPAIGDIYRNCEIKSIAPYGV 773
           IEESG+EAID  D+GTVKI A D++SLER+KA+IS LTMVP++GDIYRNCEIKS+APYG 
Sbjct: 719 IEESGVEAIDMQDDGTVKIMAIDVASLERAKAIISGLTMVPSVGDIYRNCEIKSMAPYGA 778

Query: 774 FVEIAPGREGLCHISELSSGWLPKAEDVFKVGDRIDVKLIEINDKGQLRLSHRALLXXXX 833
           FVEIAPGREGLCHISELS+ WL K ED +KVGDRIDVKLIE+N+KGQLRLS RALL    
Sbjct: 779 FVEIAPGREGLCHISELSAEWLAKPEDAYKVGDRIDVKLIEVNEKGQLRLSVRALLPESE 838

Query: 834 XXXXXXXXQAKDGIAEEKIEQPKDKINTPKGXXXXXXXXXXXA----LPSKKFIRRMVSP 889
                   Q      ++K  Q K  +NT              +    +  KK +RR    
Sbjct: 839 TDKDSQKQQPAGDSTKDKSSQRK-YVNTSSKDRAAAGASKVSSGDELVLKKKDVRRATGG 897

Query: 890 SQDKPVTNKDKIKRSSNKAESDKDESSLVSEEA 922
           S DK + +            S  +E SLV+ EA
Sbjct: 898 SSDKTMNSN-----------SSTNEESLVNGEA 919


>AT5G14580.1 | Symbols:  | polyribonucleotide
           nucleotidyltransferase, putative | chr5:4697612-4703013
           REVERSE LENGTH=991
          Length = 991

 Score =  438 bits (1127), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 291/789 (36%), Positives = 427/789 (54%), Gaps = 70/789 (8%)

Query: 48  FPTTKGGLGGFAVRASLEDPSVVPESAVDVGAP--QPYSVKIPVGDRHILVETDHIGRQA 105
           F T   G  GFA       PSV P+S V  G    + +  +  VG R +  ET  I R A
Sbjct: 24  FRTICSGRLGFA-------PSV-PDSPVSAGTKILESFKEEFEVGSRVVSFETGKIARFA 75

Query: 106 SGSVTVTDGETIVYTTVCLDDVPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGKTKDH 165
           +GSV +   ET V +TV      S P DF PL+V+YQE+  A G     + +REG  K+ 
Sbjct: 76  NGSVVLGMDETKVLSTVTCAKTDS-PRDFLPLTVDYQEKQYAQGLIPNTYMRREGAPKER 134

Query: 166 EVLICRLIDRPLRPSMPKGFYHETQILSWVLSYDGLHSPDSLAVTAAGIAVALSEVPMSK 225
           E+L  RLIDRP+RP  P GFYHE QI++ VLS DG   PD LA  A+  A+ LS+VP   
Sbjct: 135 ELLCGRLIDRPIRPLFPTGFYHEVQIMASVLSSDGKQDPDILAANASSAALMLSDVPWGG 194

Query: 226 TVAGVRIGLVGDKFLVNPTTEEMENSELDLLLAGTDSAILMIEGYSNFLPEEKLLEAVEV 285
            +  +RIG +  +F+VNPT +E+ +S+L+L+ A T    +MI+  S  + E+ L  A+ +
Sbjct: 195 PIGVIRIGRICGQFVVNPTMDELSSSDLNLIYACTRDKTMMIDVQSREISEKDLAAALRL 254

Query: 286 GQ-DAVRAICKEVAALVKKCGKPKMFDAIKLPPPELYKHVEEIAGDELVKVLQ--IRNKI 342
              +AV+ +  ++  L +K GK K    + +   +  + V ++A   +  V       K 
Sbjct: 255 AHPEAVKYLDPQIR-LAEKAGKQKKEYKLSMLSDKTLEKVADLAATRIESVFTDPSYGKF 313

Query: 343 PRRKALSSLEEKVIKILTENGVVTNDATQRSNTETIAXXXXXXXXXXXXXXXXXXXXXXX 402
            R +AL ++ + V K+  E G          + E+++                       
Sbjct: 314 ERGEALDNIGKDVRKVFEEEG----------DQESLS----------------------- 340

Query: 403 HIKPTARKPTPLFSEVDVKLVFKEVTSKFLRKRIVEGGKRSDGRKPNEIRPINSRCGLLP 462
            I P A         VD       V  K +R R++  G R DGR  +E+RPI      LP
Sbjct: 341 -ILPKA---------VDT------VRKKVVRSRMISDGFRVDGRHVDEVRPIYCESHYLP 384

Query: 463 RAHGSTLFTRGETQSLAVVTLGDKQMAQRIDNLMGVDEFKKFYLQYSFPPSCVGEVGRIG 522
             HGS LF+RG+TQ L  VTLG    AQ +D+L+G  + K+F L YSFPP C  EVG+ G
Sbjct: 385 ALHGSALFSRGDTQVLCTVTLGAPAEAQSLDSLVGPPK-KRFMLHYSFPPYCTNEVGKRG 443

Query: 523 APSRREIGHGMLAERSLEPILPSDKDFPYTIRVESTITESNGSSSMASVCGGCLALQDAG 582
             +RRE+GHG LAE++L  +LP ++ FPYTIR+ S +  S+GS+SMASVCGG +AL DAG
Sbjct: 444 GLNRREVGHGTLAEKALLAVLPPEEAFPYTIRINSEVMSSDGSTSMASVCGGSMALMDAG 503

Query: 583 VPIKSAIAGIAMGMVLDTKEFGGDGTPL-ILSDITGSEDASGDMDFKVAGNEHGITAFQM 641
           +P+++ +AG+++G++ D     G+     I++DI G ED  GDMDFK+AG   G+TA Q+
Sbjct: 504 IPLRAHVAGVSVGLITDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRDGVTAIQL 563

Query: 642 DIKVGGITLPVMREALLQARDGRKHILGEMMNCSPPPAKILSKYAPLIHIMKVRPDKVNL 701
           DIK  GI L ++ E+L  AR+ R  IL  M      P      Y+P +  +K   D +  
Sbjct: 564 DIKPAGIPLDIVCESLENAREARLQILDHMERNINSPRGQDGAYSPRLATLKYSNDSLRT 623

Query: 702 IIGSGGKKVKSIIEESGIEAIDTDDNGTVKIFARDLSSLERSKAMISNLTMVP-AIGDIY 760
           +IG  G   + I  E+G  A  + DNGT+ I A++   +E+++  +  +      +G +Y
Sbjct: 624 LIGPMGVLKRKIEVETG--ARLSIDNGTLTIVAKNQDVMEKAQEQVDFIIGRELVVGGVY 681

Query: 761 RNCEIKSIAPYGVFVEIAPGREGLCHISELSSGWLPKAEDVFKVGDRIDVKLIEINDKGQ 820
           +   + SI  YG FVE   G++GL H+SELS   + K  DV  +G  I    IE + +G 
Sbjct: 682 KGT-VSSIKEYGAFVEFPGGQQGLLHMSELSHEPVSKVSDVLDIGQCITTMCIETDVRGN 740

Query: 821 LRLSHRALL 829
           ++LS +ALL
Sbjct: 741 IKLSRKALL 749


>AT2G47220.1 | Symbols: DUF5, ATDUF5 | DOMAIN OF UNKNOWN FUNCTION
           724 5 | chr2:19384059-19386472 FORWARD LENGTH=469
          Length = 469

 Score =  148 bits (374), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 70/92 (76%), Positives = 78/92 (84%), Gaps = 1/92 (1%)

Query: 80  PQPYSVKIPVGDRHILVETDHIGRQASGSVTVTDGETIVYTTVCLDDVPSEPSDFFPLSV 139
           P   SVKIP G+R ILVET  +GRQAS +VTVTDGETIV+T+VCL DVPSEPSDF PL V
Sbjct: 17  PNHVSVKIPFGNREILVETGLMGRQASSAVTVTDGETIVFTSVCLADVPSEPSDFLPLYV 76

Query: 140 NYQERFSAAGRTSGGFFKREGKTKDHEV-LIC 170
           +YQERFSA GRTSGGFFKREG+TKDHEV  +C
Sbjct: 77  HYQERFSAVGRTSGGFFKREGRTKDHEVTFLC 108


>AT3G46210.6 | Symbols:  | Ribosomal protein S5 domain 2-like
           superfamily protein | chr3:16976960-16978489 REVERSE
           LENGTH=239
          Length = 239

 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)

Query: 442 RSDGRKPNEIRPINSRCGLLPRAHGSTLFTRGETQSLAVVTLGDKQMAQRIDNLMGVDEF 501
           R DGR PN++RP+     +L R HGS  +++G+T+ LA V  G K   ++ +N       
Sbjct: 5   REDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAV-YGPKAGTKKNENA------ 57

Query: 502 KKFYLQYSFPPSCVGEVGRIGAPSRREIGHGMLAERSLEPILPSDKDFPYTIRVESTITE 561
           +K   +  + P   G++G++      E  + M+ +R+++ I     +   T  V   +  
Sbjct: 58  EKACFEVIWKPK-SGQIGKV------EKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVH 110

Query: 562 SNGSSSMASVCGGCLALQDAGVPIKSAIAGIAMGM 596
            +GS    ++   C AL DAG+P+K     I   +
Sbjct: 111 DDGSLLPCAINAACAALVDAGIPMKHLAVAICCCL 145


>AT3G46210.5 | Symbols:  | Ribosomal protein S5 domain 2-like
           superfamily protein | chr3:16976960-16978489 REVERSE
           LENGTH=239
          Length = 239

 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)

Query: 442 RSDGRKPNEIRPINSRCGLLPRAHGSTLFTRGETQSLAVVTLGDKQMAQRIDNLMGVDEF 501
           R DGR PN++RP+     +L R HGS  +++G+T+ LA V  G K   ++ +N       
Sbjct: 5   REDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAV-YGPKAGTKKNENA------ 57

Query: 502 KKFYLQYSFPPSCVGEVGRIGAPSRREIGHGMLAERSLEPILPSDKDFPYTIRVESTITE 561
           +K   +  + P   G++G++      E  + M+ +R+++ I     +   T  V   +  
Sbjct: 58  EKACFEVIWKPK-SGQIGKV------EKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVH 110

Query: 562 SNGSSSMASVCGGCLALQDAGVPIKSAIAGIAMGM 596
            +GS    ++   C AL DAG+P+K     I   +
Sbjct: 111 DDGSLLPCAINAACAALVDAGIPMKHLAVAICCCL 145


>AT3G46210.4 | Symbols:  | Ribosomal protein S5 domain 2-like
           superfamily protein | chr3:16976960-16978489 REVERSE
           LENGTH=239
          Length = 239

 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)

Query: 442 RSDGRKPNEIRPINSRCGLLPRAHGSTLFTRGETQSLAVVTLGDKQMAQRIDNLMGVDEF 501
           R DGR PN++RP+     +L R HGS  +++G+T+ LA V  G K   ++ +N       
Sbjct: 5   REDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAV-YGPKAGTKKNENA------ 57

Query: 502 KKFYLQYSFPPSCVGEVGRIGAPSRREIGHGMLAERSLEPILPSDKDFPYTIRVESTITE 561
           +K   +  + P   G++G++      E  + M+ +R+++ I     +   T  V   +  
Sbjct: 58  EKACFEVIWKPK-SGQIGKV------EKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVH 110

Query: 562 SNGSSSMASVCGGCLALQDAGVPIKSAIAGIAMGM 596
            +GS    ++   C AL DAG+P+K     I   +
Sbjct: 111 DDGSLLPCAINAACAALVDAGIPMKHLAVAICCCL 145


>AT3G46210.3 | Symbols:  | Ribosomal protein S5 domain 2-like
           superfamily protein | chr3:16976960-16978489 REVERSE
           LENGTH=239
          Length = 239

 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)

Query: 442 RSDGRKPNEIRPINSRCGLLPRAHGSTLFTRGETQSLAVVTLGDKQMAQRIDNLMGVDEF 501
           R DGR PN++RP+     +L R HGS  +++G+T+ LA V  G K   ++ +N       
Sbjct: 5   REDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAV-YGPKAGTKKNENA------ 57

Query: 502 KKFYLQYSFPPSCVGEVGRIGAPSRREIGHGMLAERSLEPILPSDKDFPYTIRVESTITE 561
           +K   +  + P   G++G++      E  + M+ +R+++ I     +   T  V   +  
Sbjct: 58  EKACFEVIWKPK-SGQIGKV------EKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVH 110

Query: 562 SNGSSSMASVCGGCLALQDAGVPIKSAIAGIAMGM 596
            +GS    ++   C AL DAG+P+K     I   +
Sbjct: 111 DDGSLLPCAINAACAALVDAGIPMKHLAVAICCCL 145


>AT3G46210.2 | Symbols:  | Ribosomal protein S5 domain 2-like
           superfamily protein | chr3:16976960-16978489 REVERSE
           LENGTH=239
          Length = 239

 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)

Query: 442 RSDGRKPNEIRPINSRCGLLPRAHGSTLFTRGETQSLAVVTLGDKQMAQRIDNLMGVDEF 501
           R DGR PN++RP+     +L R HGS  +++G+T+ LA V  G K   ++ +N       
Sbjct: 5   REDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAV-YGPKAGTKKNENA------ 57

Query: 502 KKFYLQYSFPPSCVGEVGRIGAPSRREIGHGMLAERSLEPILPSDKDFPYTIRVESTITE 561
           +K   +  + P   G++G++      E  + M+ +R+++ I     +   T  V   +  
Sbjct: 58  EKACFEVIWKPK-SGQIGKV------EKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVH 110

Query: 562 SNGSSSMASVCGGCLALQDAGVPIKSAIAGIAMGM 596
            +GS    ++   C AL DAG+P+K     I   +
Sbjct: 111 DDGSLLPCAINAACAALVDAGIPMKHLAVAICCCL 145


>AT3G46210.1 | Symbols:  | Ribosomal protein S5 domain 2-like
           superfamily protein | chr3:16976960-16978489 REVERSE
           LENGTH=239
          Length = 239

 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)

Query: 442 RSDGRKPNEIRPINSRCGLLPRAHGSTLFTRGETQSLAVVTLGDKQMAQRIDNLMGVDEF 501
           R DGR PN++RP+     +L R HGS  +++G+T+ LA V  G K   ++ +N       
Sbjct: 5   REDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAV-YGPKAGTKKNENA------ 57

Query: 502 KKFYLQYSFPPSCVGEVGRIGAPSRREIGHGMLAERSLEPILPSDKDFPYTIRVESTITE 561
           +K   +  + P   G++G++      E  + M+ +R+++ I     +   T  V   +  
Sbjct: 58  EKACFEVIWKPK-SGQIGKV------EKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVH 110

Query: 562 SNGSSSMASVCGGCLALQDAGVPIKSAIAGIAMGM 596
            +GS    ++   C AL DAG+P+K     I   +
Sbjct: 111 DDGSLLPCAINAACAALVDAGIPMKHLAVAICCCL 145


>AT3G61620.2 | Symbols: RRP41 | 3'-5'-exoribonuclease family protein
           | chr3:22801382-22802910 REVERSE LENGTH=241
          Length = 241

 Score = 57.0 bits (136), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)

Query: 440 GKRSDGRKPNEIRPINSRCGLLPRAHGSTLFTRGETQSLAVVT----LGDKQMAQRIDNL 495
           G R DGR+ NE+R I +  G++ +A GS +F  G T+ +A V     + +K   ++ D+ 
Sbjct: 8   GLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQQKKNDHA 67

Query: 496 MGVDEFKKFYLQYSFPPSCVGEVGRIGAPSRREIGHGMLAERSLEPILPSDKDFPYTIRV 555
           + + E       YS      G+  R     RR     ++  +++E  + ++      I +
Sbjct: 68  VVLCE-------YSMAQFSTGDRRR-QKFDRRSTELSLVIRQTMEACILTELMPHSQIDI 119

Query: 556 ESTITESNGSSSMASVCGGCLALQDAGVPIKSAIAGIAMGMVLDTKEFGGDGTPLILSDI 615
              + +++G +  A +    LAL DAG+P++      + G +        + TPL+  D+
Sbjct: 120 FLQVLQADGGTRSACINAATLALADAGIPMRDLAVSCSAGYL--------NSTPLL--DL 169

Query: 616 TGSEDASGDMDFKVA--GNEHGITAFQMDIKV 645
              ED++G  D  V        ++  QMD K+
Sbjct: 170 NYVEDSAGGADVTVGILPKLDKVSLLQMDAKL 201


>AT3G61620.1 | Symbols: RRP41 | 3'-5'-exoribonuclease family protein
           | chr3:22801382-22802910 REVERSE LENGTH=241
          Length = 241

 Score = 57.0 bits (136), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)

Query: 440 GKRSDGRKPNEIRPINSRCGLLPRAHGSTLFTRGETQSLAVVT----LGDKQMAQRIDNL 495
           G R DGR+ NE+R I +  G++ +A GS +F  G T+ +A V     + +K   ++ D+ 
Sbjct: 8   GLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQQKKNDHA 67

Query: 496 MGVDEFKKFYLQYSFPPSCVGEVGRIGAPSRREIGHGMLAERSLEPILPSDKDFPYTIRV 555
           + + E       YS      G+  R     RR     ++  +++E  + ++      I +
Sbjct: 68  VVLCE-------YSMAQFSTGDRRR-QKFDRRSTELSLVIRQTMEACILTELMPHSQIDI 119

Query: 556 ESTITESNGSSSMASVCGGCLALQDAGVPIKSAIAGIAMGMVLDTKEFGGDGTPLILSDI 615
              + +++G +  A +    LAL DAG+P++      + G +        + TPL+  D+
Sbjct: 120 FLQVLQADGGTRSACINAATLALADAGIPMRDLAVSCSAGYL--------NSTPLL--DL 169

Query: 616 TGSEDASGDMDFKVA--GNEHGITAFQMDIKV 645
              ED++G  D  V        ++  QMD K+
Sbjct: 170 NYVEDSAGGADVTVGILPKLDKVSLLQMDAKL 201