Miyakogusa Predicted Gene

Lj1g3v3975790.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3975790.1 CUFF.31684.1
         (386 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G17930.1 | Symbols:  | MIF4G domain-containing protein / MA3 ...   426   e-119

>AT5G17930.1 | Symbols:  | MIF4G domain-containing protein / MA3
           domain-containing protein | chr5:5940131-5943952 REVERSE
           LENGTH=784
          Length = 784

 Score =  426 bits (1096), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 206/348 (59%), Positives = 264/348 (75%), Gaps = 5/348 (1%)

Query: 29  KYIAPHLRARAGNKPEEHTQIRRRVRGLLNRLSESNVESITGELSLIFQSVARSVASRIT 88
           KY+APHLR++A ++ EE T++R R++GLLN+++ESNVE+IT EL+ I++SVARSV+S+I 
Sbjct: 281 KYVAPHLRSQAKSESEELTKMRTRIKGLLNKMAESNVETITAELATIYRSVARSVSSQIF 340

Query: 89  IEEILASCYSGPRGNEQYXXXXXXXXXGMACLVGIDFSAKFMASFAKCFEDEYHKEDXXX 148
            EE+L +     RGNEQY         GMACLVG+DFSAK +AS AK FEDEY KED   
Sbjct: 341 CEEVLTTY---ARGNEQYAVFASFIA-GMACLVGMDFSAKLIASLAKSFEDEYQKEDSLS 396

Query: 149 XXXXXXXXXXXCIFGVCSSDLIYDFLIMLSKRLAEMDVSIILAVLQCCGMKIRADDPTSM 208
                      CI GVCSSDLIYDFL+ L KRL ++D   I  VL CCGMKIR+DDP +M
Sbjct: 397 LNGISLLLSYLCILGVCSSDLIYDFLMTLGKRLTKVDAFTITTVLDCCGMKIRSDDPLAM 456

Query: 209 KNFILSVQNTSNKLKPSSGDDHEKKYSKRMEFMLETICDIKNNKSRAKEDPAHHTRIKKW 268
           K FI+S+QN +N+LK SS D   +  +  ME MLETI  IKNNK RAKED   +TR+KKW
Sbjct: 457 KTFIISIQNKANELKTSS-DGQTQMNNMMMEKMLETISAIKNNKLRAKEDSVQNTRVKKW 515

Query: 269 LQKIRAVDIMIRGLKWSKLLDPDKKGQWWLSGDVASAADNVEEVAGRIDKDVLETQRMLE 328
           LQK+R  ++++RGL WSKLLDP+KKGQWWLSGD+   ++  E++A  +D +V+E Q+ML+
Sbjct: 516 LQKLRVEEVLLRGLTWSKLLDPEKKGQWWLSGDLVVDSNTAEDIAETMDAEVVEAQKMLK 575

Query: 329 LAAAQKMNTDARRAIFCIIMSGEDYLDAFEKLLRLELPGKQDRDIMRV 376
           LA AQ+MNTD+R+AIFC+IMS EDY+DAFEKLLRL+LPGKQDR+IMRV
Sbjct: 576 LAEAQRMNTDSRKAIFCVIMSSEDYIDAFEKLLRLDLPGKQDREIMRV 623