Miyakogusa Predicted Gene
- Lj1g3v3975710.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3975710.2 Non Chatacterized Hit- tr|I1N8A7|I1N8A7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,83.18,0,CDC50,Protein
of unknown function DUF284, transmembrane eukaryotic; SUBFAMILY NOT
NAMED,NULL; CELL C,CUFF.31690.2
(357 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G54320.1 | Symbols: | LEM3 (ligand-effect modulator 3) famil... 463 e-131
AT1G79450.1 | Symbols: ALIS5 | ALA-interacting subunit 5 | chr1:... 455 e-128
AT3G12740.1 | Symbols: ALIS1 | ALA-interacting subunit 1 | chr3:... 454 e-128
AT1G16360.1 | Symbols: | LEM3 (ligand-effect modulator 3) famil... 437 e-123
AT1G79450.2 | Symbols: ALIS5 | ALA-interacting subunit 5 | chr1:... 379 e-105
AT5G46150.1 | Symbols: | LEM3 (ligand-effect modulator 3) famil... 352 2e-97
AT5G46150.2 | Symbols: | LEM3 (ligand-effect modulator 3) famil... 352 2e-97
>AT1G54320.1 | Symbols: | LEM3 (ligand-effect modulator 3) family
protein / CDC50 family protein | chr1:20275732-20277793
REVERSE LENGTH=349
Length = 349
Score = 463 bits (1192), Expect = e-131, Method: Compositional matrix adjust.
Identities = 217/330 (65%), Positives = 264/330 (80%), Gaps = 5/330 (1%)
Query: 18 KNSRKPKYSRFTQQELPAWQPILTPGWVILIFTVIGVIFIPIGLASLFASERVVEVPFRY 77
KNS++PKYS+FTQQELPA +PILTPGWVI F ++ VIFIP+G+ SLFAS+ VVE+ RY
Sbjct: 23 KNSKRPKYSKFTQQELPACKPILTPGWVISTFLIVSVIFIPLGVISLFASQDVVEIVDRY 82
Query: 78 DDQCLPPAYRDDAVAYIKDDSSSKTCIKKLTVKNKMKAPVYVYYQLDNFYQNHRRYVKSR 137
D +C+P R + VAYI+ D K C + L V +MK P+YVYYQL+NFYQNHRRYVKSR
Sbjct: 83 DTECIPAPARTNKVAYIQGDGD-KVCNRDLKVTKRMKQPIYVYYQLENFYQNHRRYVKSR 141
Query: 138 SDTQLRSKAAEYDVSSCSPEDYTPSNLGHQPIVPCGLIAWSLFNDTYRISNNNKDLVINK 197
SD+QLRS E +S+C PED ++G QPIVPCGLIAWSLFNDTY +S NN L +NK
Sbjct: 142 SDSQLRSTKYENQISACKPED----DVGGQPIVPCGLIAWSLFNDTYALSRNNVSLAVNK 197
Query: 198 KNIAWKSDQKAKFGSDVYPKNFQAGGLIGGAKLNQSIPLSEQEDLIVWMRTAALPTFRKL 257
K IAWKSD++ KFG+ V+PKNFQ G + GGA L+ IPLSEQEDLIVWMRTAALPTFRKL
Sbjct: 198 KGIAWKSDKEHKFGNKVFPKNFQKGNITGGATLDPRIPLSEQEDLIVWMRTAALPTFRKL 257
Query: 258 YGKIENDLEVNDEITMVIENNYNTYEFGGKKSLVLSTTTWIGGRNHFLGIAYIFIGGMSL 317
YGKIE+DLE+ D I + + NNYNTY F GKK LVLSTT+W+GG+N FLGIAY+ +GG+
Sbjct: 258 YGKIESDLEMGDTIHVKLNNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICF 317
Query: 318 LFAIAFLLMYVMKPRPLGDPTYLSWNRNPG 347
+ A+AF +MY++KPR LGDP+YLSWNRNPG
Sbjct: 318 ILALAFTIMYLVKPRRLGDPSYLSWNRNPG 347
>AT1G79450.1 | Symbols: ALIS5 | ALA-interacting subunit 5 |
chr1:29887831-29889904 FORWARD LENGTH=350
Length = 350
Score = 455 bits (1171), Expect = e-128, Method: Compositional matrix adjust.
Identities = 211/330 (63%), Positives = 261/330 (79%), Gaps = 5/330 (1%)
Query: 18 KNSRKPKYSRFTQQELPAWQPILTPGWVILIFTVIGVIFIPIGLASLFASERVVEVPFRY 77
K S++PKYSRFTQQELPA +PILTP WVIL F V GV+FIP+G+ LFAS+ VVE+ RY
Sbjct: 23 KTSKRPKYSRFTQQELPACKPILTPRWVILTFLVAGVVFIPLGVICLFASQGVVEIVDRY 82
Query: 78 DDQCLPPAYRDDAVAYIKDDSSSKTCIKKLTVKNKMKAPVYVYYQLDNFYQNHRRYVKSR 137
D C+P + R++ VAYI+ + K C + +TV MK PVYVYYQL+NFYQNHRRYVKSR
Sbjct: 83 DTDCIPTSSRNNMVAYIQGEGD-KICKRTITVTKAMKHPVYVYYQLENFYQNHRRYVKSR 141
Query: 138 SDTQLRSKAAEYDVSSCSPEDYTPSNLGHQPIVPCGLIAWSLFNDTYRISNNNKDLVINK 197
+D QLRS E+DV +C+PED N+G +PIVPCGL+AWSLFNDTY S N++ L++NK
Sbjct: 142 NDAQLRSPKEEHDVKTCAPED----NVGGEPIVPCGLVAWSLFNDTYSFSRNSQQLLVNK 197
Query: 198 KNIAWKSDQKAKFGSDVYPKNFQAGGLIGGAKLNQSIPLSEQEDLIVWMRTAALPTFRKL 257
K I+WKSD++ KFG +V+PKNFQ G IGG LN S PLSEQEDLIVWMRTAALPTFRKL
Sbjct: 198 KGISWKSDRENKFGKNVFPKNFQKGAPIGGGTLNISKPLSEQEDLIVWMRTAALPTFRKL 257
Query: 258 YGKIENDLEVNDEITMVIENNYNTYEFGGKKSLVLSTTTWIGGRNHFLGIAYIFIGGMSL 317
YGKIE DL D IT++++NNYNTY F G+K LVLSTT+W+GGRN FLGIAY+ +G + L
Sbjct: 258 YGKIETDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRNDFLGIAYLTVGSICL 317
Query: 318 LFAIAFLLMYVMKPRPLGDPTYLSWNRNPG 347
A+ F ++Y++KPR LGDP+YLSWNR+ G
Sbjct: 318 FLAVTFAVLYLVKPRQLGDPSYLSWNRSAG 347
>AT3G12740.1 | Symbols: ALIS1 | ALA-interacting subunit 1 |
chr3:4049739-4051561 FORWARD LENGTH=350
Length = 350
Score = 454 bits (1167), Expect = e-128, Method: Compositional matrix adjust.
Identities = 213/330 (64%), Positives = 264/330 (80%), Gaps = 5/330 (1%)
Query: 18 KNSRKPKYSRFTQQELPAWQPILTPGWVILIFTVIGVIFIPIGLASLFASERVVEVPFRY 77
+NS++PKYS+FTQQELPA +PILTPGWVI F +I VIFIP+G+ SLFAS+ VVE+ RY
Sbjct: 24 RNSKRPKYSKFTQQELPACKPILTPGWVISTFLIISVIFIPLGVISLFASQDVVEIVDRY 83
Query: 78 DDQCLPPAYRDDAVAYIKDDSSSKTCIKKLTVKNKMKAPVYVYYQLDNFYQNHRRYVKSR 137
D C+P + R + VAYI+ + +K+C + L V +MK P+YVYYQL+NFYQNHRRYVKSR
Sbjct: 84 DSACIPLSDRANKVAYIQG-TGNKSCTRTLIVPKRMKQPIYVYYQLENFYQNHRRYVKSR 142
Query: 138 SDTQLRSKAAEYDVSSCSPEDYTPSNLGHQPIVPCGLIAWSLFNDTYRISNNNKDLVINK 197
SD+QLRS E + +C PED + G QPIVPCGLIAWSLFNDTY +S NN+ L +NK
Sbjct: 143 SDSQLRSVKDENQIDACKPED----DFGGQPIVPCGLIAWSLFNDTYVLSRNNQGLTVNK 198
Query: 198 KNIAWKSDQKAKFGSDVYPKNFQAGGLIGGAKLNQSIPLSEQEDLIVWMRTAALPTFRKL 257
K IAWKSD++ KFG +V+PKNFQ G L GGA L+ + PLS+QEDLIVWMRTAALPTFRKL
Sbjct: 199 KGIAWKSDKEHKFGKNVFPKNFQKGNLTGGASLDPNKPLSDQEDLIVWMRTAALPTFRKL 258
Query: 258 YGKIENDLEVNDEITMVIENNYNTYEFGGKKSLVLSTTTWIGGRNHFLGIAYIFIGGMSL 317
YGKIE+DLE + I + ++NNYNTY F GKK LVLSTT+W+GG+N FLGIAY+ +GG+
Sbjct: 259 YGKIESDLEKGENIQVTLQNNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICF 318
Query: 318 LFAIAFLLMYVMKPRPLGDPTYLSWNRNPG 347
+ A+AF +MY++KPR LGDPTYLSWNR PG
Sbjct: 319 VLALAFTVMYLVKPRRLGDPTYLSWNRIPG 348
>AT1G16360.1 | Symbols: | LEM3 (ligand-effect modulator 3) family
protein / CDC50 family protein | chr1:5593493-5595179
REVERSE LENGTH=336
Length = 336
Score = 437 bits (1125), Expect = e-123, Method: Compositional matrix adjust.
Identities = 204/322 (63%), Positives = 252/322 (78%), Gaps = 5/322 (1%)
Query: 26 SRFTQQELPAWQPILTPGWVILIFTVIGVIFIPIGLASLFASERVVEVPFRYDDQCLPPA 85
SRFTQQELPA +PILTP WVIL F V GV+FIP+G+ LFAS+ V+E+ RYD C+P +
Sbjct: 17 SRFTQQELPACKPILTPKWVILTFLVSGVVFIPLGVICLFASQGVIEIVDRYDTDCIPLS 76
Query: 86 YRDDAVAYIKDDSSSKTCIKKLTVKNKMKAPVYVYYQLDNFYQNHRRYVKSRSDTQLRSK 145
RD+ V YI+ K C + +TV MK PVYVYYQL+N+YQNHRRYVKSR D QLRS
Sbjct: 77 SRDNKVRYIQG-LEDKRCNRTITVTKTMKNPVYVYYQLENYYQNHRRYVKSRQDGQLRSP 135
Query: 146 AAEYDVSSCSPEDYTPSNLGHQPIVPCGLIAWSLFNDTYRISNNNKDLVINKKNIAWKSD 205
E++ SC+PED LG QPIVPCGL+AWSLFNDTY + NN+ L +NKK+I+WKSD
Sbjct: 136 KDEHETKSCAPED----TLGGQPIVPCGLVAWSLFNDTYDFTRNNQKLPVNKKDISWKSD 191
Query: 206 QKAKFGSDVYPKNFQAGGLIGGAKLNQSIPLSEQEDLIVWMRTAALPTFRKLYGKIENDL 265
+++KFG +V+PKNFQ G LIGG L+Q IPLSEQEDLIVWMRTAALPTFRKLYGKI+ DL
Sbjct: 192 RESKFGKNVFPKNFQKGSLIGGKSLDQDIPLSEQEDLIVWMRTAALPTFRKLYGKIDTDL 251
Query: 266 EVNDEITMVIENNYNTYEFGGKKSLVLSTTTWIGGRNHFLGIAYIFIGGMSLLFAIAFLL 325
+ D I ++++NNYNTY F GKK LVLSTT+W+GGRN FLGIAY+ +G + L A++F +
Sbjct: 252 QAGDTIKVLLQNNYNTYSFNGKKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVSFSV 311
Query: 326 MYVMKPRPLGDPTYLSWNRNPG 347
+Y+ KPR LGDP+YLSWNR+ G
Sbjct: 312 LYLAKPRQLGDPSYLSWNRSAG 333
>AT1G79450.2 | Symbols: ALIS5 | ALA-interacting subunit 5 |
chr1:29888665-29889904 FORWARD LENGTH=283
Length = 283
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 175/279 (62%), Positives = 219/279 (78%), Gaps = 5/279 (1%)
Query: 69 RVVEVPFRYDDQCLPPAYRDDAVAYIKDDSSSKTCIKKLTVKNKMKAPVYVYYQLDNFYQ 128
+VVE+ RYD C+P + R++ VAYI+ + K C + +TV MK PVYVYYQL+NFYQ
Sbjct: 7 KVVEIVDRYDTDCIPTSSRNNMVAYIQGEGD-KICKRTITVTKAMKHPVYVYYQLENFYQ 65
Query: 129 NHRRYVKSRSDTQLRSKAAEYDVSSCSPEDYTPSNLGHQPIVPCGLIAWSLFNDTYRISN 188
NHRRYVKSR+D QLRS E+DV +C+PED N+G +PIVPCGL+AWSLFNDTY S
Sbjct: 66 NHRRYVKSRNDAQLRSPKEEHDVKTCAPED----NVGGEPIVPCGLVAWSLFNDTYSFSR 121
Query: 189 NNKDLVINKKNIAWKSDQKAKFGSDVYPKNFQAGGLIGGAKLNQSIPLSEQEDLIVWMRT 248
N++ L++NKK I+WKSD++ KFG +V+PKNFQ G IGG LN S PLSEQEDLIVWMRT
Sbjct: 122 NSQQLLVNKKGISWKSDRENKFGKNVFPKNFQKGAPIGGGTLNISKPLSEQEDLIVWMRT 181
Query: 249 AALPTFRKLYGKIENDLEVNDEITMVIENNYNTYEFGGKKSLVLSTTTWIGGRNHFLGIA 308
AALPTFRKLYGKIE DL D IT++++NNYNTY F G+K LVLSTT+W+GGRN FLGIA
Sbjct: 182 AALPTFRKLYGKIETDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRNDFLGIA 241
Query: 309 YIFIGGMSLLFAIAFLLMYVMKPRPLGDPTYLSWNRNPG 347
Y+ +G + L A+ F ++Y++KPR LGDP+YLSWNR+ G
Sbjct: 242 YLTVGSICLFLAVTFAVLYLVKPRQLGDPSYLSWNRSAG 280
>AT5G46150.1 | Symbols: | LEM3 (ligand-effect modulator 3) family
protein / CDC50 family protein | chr5:18708735-18710424
REVERSE LENGTH=343
Length = 343
Score = 352 bits (903), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 175/344 (50%), Positives = 233/344 (67%), Gaps = 7/344 (2%)
Query: 1 MSIQPSSTSTVERDGQSKNSRKPKYSRFTQQELPAWQPILTPGWVILIFTVIGVIFIPIG 60
M ++ S ++ ++ R +F QQ+LPA +P+LTP VI +F ++G +FIPIG
Sbjct: 2 MEVEGSMNRAPDQSSFLRSRRSKALYQFKQQKLPACKPVLTPISVITVFMLMGFVFIPIG 61
Query: 61 LASLFASERVVEVPFRYDDQCLPPAYRDDAVAYIKDDSSSKTCIKKLTVKNKMKAPVYVY 120
L +L AS +E+ RYD +C+P YR + + YI D S K C + L V+ MKAP+++Y
Sbjct: 62 LITLRASRDAIEIIDRYDVECIPEEYRTNKLLYITDSSIPKNCTRYLKVQKYMKAPIFIY 121
Query: 121 YQLDNFYQNHRRYVKSRSDTQLRSKAAEYDVSSCSPEDYTPSNLGHQPIVPCGLIAWSLF 180
YQLDN+YQNHRRYVKSRSD QL SSC PE+ + PIVPCGLIAWS+F
Sbjct: 122 YQLDNYYQNHRRYVKSRSDQQLLHGLEYSHTSSCEPEESS----NGLPIVPCGLIAWSMF 177
Query: 181 NDTYRISNNNKDLVINKKNIAWKSDQKAKFGSDVYPKNFQAGGLIGGAKLNQSIPLSEQE 240
NDT+ S L +++ NIAWKSD++ KFG +VYP NFQ G LIGGAKL+ IPLS+QE
Sbjct: 178 NDTFTFSRERTKLNVSRNNIAWKSDREHKFGKNVYPINFQNGTLIGGAKLDPKIPLSDQE 237
Query: 241 DLIVWMRTAALPTFRKLYGKIENDLEVNDEITMVIENNYNTYEFGGKKSLVLSTTTWIGG 300
D IVWMR AAL +FRKLYG+IE DLE + + + NNYNTY F G+K L+LST+ W+GG
Sbjct: 238 DFIVWMRAAALLSFRKLYGRIEEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGG 297
Query: 301 RNHFLGIAYIFIGGMSLLFAIAFLLMYVMKPRPLGDPTYLSWNR 344
RN FLGI Y+ +G S++ +I F+L+++ PRP GD SWN+
Sbjct: 298 RNDFLGITYLVVGSSSIVISIIFMLLHLKNPRPYGDN---SWNK 338
>AT5G46150.2 | Symbols: | LEM3 (ligand-effect modulator 3) family
protein / CDC50 family protein | chr5:18708735-18710424
REVERSE LENGTH=343
Length = 343
Score = 352 bits (903), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 175/344 (50%), Positives = 233/344 (67%), Gaps = 7/344 (2%)
Query: 1 MSIQPSSTSTVERDGQSKNSRKPKYSRFTQQELPAWQPILTPGWVILIFTVIGVIFIPIG 60
M ++ S ++ ++ R +F QQ+LPA +P+LTP VI +F ++G +FIPIG
Sbjct: 2 MEVEGSMNRAPDQSSFLRSRRSKALYQFKQQKLPACKPVLTPISVITVFMLMGFVFIPIG 61
Query: 61 LASLFASERVVEVPFRYDDQCLPPAYRDDAVAYIKDDSSSKTCIKKLTVKNKMKAPVYVY 120
L +L AS +E+ RYD +C+P YR + + YI D S K C + L V+ MKAP+++Y
Sbjct: 62 LITLRASRDAIEIIDRYDVECIPEEYRTNKLLYITDSSIPKNCTRYLKVQKYMKAPIFIY 121
Query: 121 YQLDNFYQNHRRYVKSRSDTQLRSKAAEYDVSSCSPEDYTPSNLGHQPIVPCGLIAWSLF 180
YQLDN+YQNHRRYVKSRSD QL SSC PE+ + PIVPCGLIAWS+F
Sbjct: 122 YQLDNYYQNHRRYVKSRSDQQLLHGLEYSHTSSCEPEESS----NGLPIVPCGLIAWSMF 177
Query: 181 NDTYRISNNNKDLVINKKNIAWKSDQKAKFGSDVYPKNFQAGGLIGGAKLNQSIPLSEQE 240
NDT+ S L +++ NIAWKSD++ KFG +VYP NFQ G LIGGAKL+ IPLS+QE
Sbjct: 178 NDTFTFSRERTKLNVSRNNIAWKSDREHKFGKNVYPINFQNGTLIGGAKLDPKIPLSDQE 237
Query: 241 DLIVWMRTAALPTFRKLYGKIENDLEVNDEITMVIENNYNTYEFGGKKSLVLSTTTWIGG 300
D IVWMR AAL +FRKLYG+IE DLE + + + NNYNTY F G+K L+LST+ W+GG
Sbjct: 238 DFIVWMRAAALLSFRKLYGRIEEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGG 297
Query: 301 RNHFLGIAYIFIGGMSLLFAIAFLLMYVMKPRPLGDPTYLSWNR 344
RN FLGI Y+ +G S++ +I F+L+++ PRP GD SWN+
Sbjct: 298 RNDFLGITYLVVGSSSIVISIIFMLLHLKNPRPYGDN---SWNK 338