Miyakogusa Predicted Gene

Lj1g3v3975590.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3975590.1 Non Chatacterized Hit- tr|I3SA27|I3SA27_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,96.69,0,RRM,RNA
recognition motif domain; no description,Nucleotide-binding,
alpha-beta plait; RNA-binding d,CUFF.31685.1
         (272 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G32450.1 | Symbols:  | RNA binding (RRM/RBD/RNP motifs) famil...   376   e-105
AT4G17720.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...   201   3e-52
AT5G46870.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...   198   3e-51
AT5G16840.1 | Symbols: BPA1 | binding partner of acd11 1 | chr5:...   184   8e-47
AT5G16840.2 | Symbols: BPA1 | binding partner of acd11 1 | chr5:...   184   8e-47
AT5G16840.3 | Symbols: BPA1 | binding partner of acd11 1 | chr5:...   183   8e-47
AT1G67950.3 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...   176   2e-44
AT1G67950.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...   175   3e-44
AT1G67950.2 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...   175   4e-44
AT1G67950.4 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...   140   8e-34
AT1G14340.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...   137   1e-32
AT3G01210.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...   115   3e-26

>AT5G32450.1 | Symbols:  | RNA binding (RRM/RBD/RNP motifs) family
           protein | chr5:12079707-12081317 FORWARD LENGTH=267
          Length = 267

 Score =  376 bits (966), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/273 (68%), Positives = 229/273 (83%), Gaps = 10/273 (3%)

Query: 1   MQT-RTVQVKQVSDLVGEREIHEFFSFSGEIEHVEILSEYGKSKTAFVTFKDAKALEIAL 59
           MQT R+VQV  VSDL  EREIHEFFSFSG+IEH+EI  E+G+S+ AFVTF D KALEIAL
Sbjct: 1   MQTTRSVQVNNVSDLATEREIHEFFSFSGDIEHIEIQKEFGQSRIAFVTFTDPKALEIAL 60

Query: 60  LLSGATIVDQIVSITPVENYVPNREMLEVTVVENAINVAPEHVSLNIEEEKPSSPSSVNG 119
           LLSGATIVDQIV+IT  ENYV  RE  EV +++NA+        L ++E    + ++++G
Sbjct: 61  LLSGATIVDQIVTITRAENYVQRRETQEVRMLDNAM-------PLGLQESTTQTKTNMDG 113

Query: 120 --RVYLSRAQVAVSSMLAKGSAIKQDAVNKAKAFDEKHQLTSNASAKVISFDKRVGLTEK 177
             R Y+S+AQ  V+++LAKGSA+ QDAVNKAKAFDEKHQL +NASAKV SFDKRVGLTEK
Sbjct: 114 NSRAYVSKAQDVVATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVSSFDKRVGLTEK 173

Query: 178 LTVGLSAMNEKVKSVDQRLHVSDKTMAAIFAAERKLNDTGSAVKTSRYVTAGTSWLNGAF 237
           L+VG+SA+NEKVKSVDQ+L VSDKTMAAIFAAERKLNDTGSAVK+SRYVTAG +W +GAF
Sbjct: 174 LSVGISAVNEKVKSVDQKLQVSDKTMAAIFAAERKLNDTGSAVKSSRYVTAGAAWFSGAF 233

Query: 238 SKVAKVGHVASTRTREKFNMAVSNLTAKDSPVA 270
           SKVA+VG VA ++T+EKFN+AVSN+++KD+P+A
Sbjct: 234 SKVARVGQVAGSKTKEKFNLAVSNMSSKDTPIA 266


>AT4G17720.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr4:9862660-9864498 REVERSE LENGTH=313
          Length = 313

 Score =  201 bits (512), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/260 (45%), Positives = 163/260 (62%), Gaps = 22/260 (8%)

Query: 1   MQTRTVQVKQVSDLVGEREIHEFFSFSGEIEHVEILSEYGKSKTAFVTFKDAKALEIALL 60
           M   TV+V  VS    +R++ EFFSFSG+I ++E  SE  ++K A+VTFKD +  E A+L
Sbjct: 1   MTMTTVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVL 60

Query: 61  LSGATIVDQ--IVSITPVENYVPNREMLEVTVVENAINVAPEHVSLNIEEEKPSSPSSVN 118
           LSGATIVD   IVS+ P  +Y                 ++PE  +L   E K S+ S   
Sbjct: 61  LSGATIVDSSVIVSMAP--DY----------------QLSPE--ALASLEPKDSNKSPKA 100

Query: 119 GRVYLSRAQVAVSSMLAKGSAIKQDAVNKAKAFDEKHQLTSNASAKVISFDKRVGLTEKL 178
           G   L +A+  VSSMLAKG  + +DA+ KAK+ DEKHQLTS ASAKV SFDK++G T+K+
Sbjct: 101 GDSVLRKAEDVVSSMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKI 160

Query: 179 TVGLSAMNEKVKSVDQRLHVSDKTMAAIFAAERKLNDTGSAVKTSRYVTAGTSWLNGAFS 238
             G   + EKV+ VDQ+  VS+KT +AI AAE+ +++ GSA+  +RYV  G +W+ GAF+
Sbjct: 161 NTGTVVVGEKVREVDQKYQVSEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFN 220

Query: 239 KVAKVGHVASTRTREKFNMA 258
           KVAK       + +EK  MA
Sbjct: 221 KVAKAAEEVGQKAKEKVGMA 240


>AT5G46870.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr5:19015486-19016990 FORWARD LENGTH=295
          Length = 295

 Score =  198 bits (504), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 110/259 (42%), Positives = 164/259 (63%), Gaps = 16/259 (6%)

Query: 1   MQTRTVQVKQVSDLVGEREIHEFFSFSGEIEHVEILSEYGKSKTAFVTFKDAKALEIALL 60
           M   TV+V  VS    ER++ EFFSFSG+I ++E  SE   SK A+VTFKD +  E A+L
Sbjct: 1   MSMVTVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVL 60

Query: 61  LSGATIVDQIVSITPVENY-VPNREMLEVTVVENAINVAPEHVSLNIEEEKPSSPSSVNG 119
           L+G+TIVD  V++T   +Y +P   +  +  ++              E  K SSP+  + 
Sbjct: 61  LTGSTIVDSSVTVTMSPDYQLPPDALASIESLK--------------ESNKSSSPTREDV 106

Query: 120 RVYLSRAQVAVSSMLAKGSAIKQDAVNKAKAFDEKHQLTSNASAKVISFDKRVGLTEKLT 179
            V+  +A+  VS M++KG  + +DA+ KAK+ DEKHQLTS ASA+V SFDKR+G TEK+ 
Sbjct: 107 SVF-RKAEDVVSGMISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKIN 165

Query: 180 VGLSAMNEKVKSVDQRLHVSDKTMAAIFAAERKLNDTGSAVKTSRYVTAGTSWLNGAFSK 239
            G + ++EKVK VDQ+  V++KT +AI AAE+ +++ GSA+  +RYV  G +W+ GAF++
Sbjct: 166 TGTTVVSEKVKEVDQKFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNR 225

Query: 240 VAKVGHVASTRTREKFNMA 258
           V+K       + +EK  +A
Sbjct: 226 VSKAAEEVGQKAKEKVGLA 244


>AT5G16840.1 | Symbols: BPA1 | binding partner of acd11 1 |
           chr5:5536042-5538026 FORWARD LENGTH=259
          Length = 259

 Score =  184 bits (466), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 109/253 (43%), Positives = 150/253 (59%), Gaps = 28/253 (11%)

Query: 2   QTRTVQVKQVSDLVGEREIHEFFSFSGEIEHVEILSEYGKSKTAFVTFKDAKALEIALLL 61
           Q R+V+V  +S    E +I EFFSFSGE+E ++I S      +A+VTFK+ +  E A+LL
Sbjct: 4   QVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQS---NEHSAYVTFKETQGAETAVLL 60

Query: 62  SGATIVDQIVSITPVENYVPNREMLEVTVVENAINVAPEHVSLNIEEEKPSSPSSVNGRV 121
           SGA+I DQ V I    NY P                AP        E + S   SV    
Sbjct: 61  SGASIADQSVIIELAPNYSPP--------------AAPH------AETQSSGAESV---- 96

Query: 122 YLSRAQVAVSSMLAKGSAIKQDAVNKAKAFDEKHQLTSNASAKVISFDKRVGLTEKLTVG 181
            + +A+  VSSMLAKG  + +DAV KAKAFDEKH  TS A+A V S D+++GL++KLT G
Sbjct: 97  -VQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAG 155

Query: 182 LSAMNEKVKSVDQRLHVSDKTMAAIFAAERKLNDTGSAVKTSRYVTAGTSWLNGAFSKVA 241
            S +NEK+K+VDQ   V+++T +   AAE+ ++  GSAV  +RYV  G SW  GAF++VA
Sbjct: 156 TSLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVA 215

Query: 242 KVGHVASTRTREK 254
           +       +T+EK
Sbjct: 216 QAAGEVGQKTKEK 228


>AT5G16840.2 | Symbols: BPA1 | binding partner of acd11 1 |
           chr5:5536042-5538026 FORWARD LENGTH=260
          Length = 260

 Score =  184 bits (466), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 109/253 (43%), Positives = 150/253 (59%), Gaps = 27/253 (10%)

Query: 2   QTRTVQVKQVSDLVGEREIHEFFSFSGEIEHVEILSEYGKSKTAFVTFKDAKALEIALLL 61
           Q R+V+V  +S    E +I EFFSFSGE+E ++I S      +A+VTFK+ +  E A+LL
Sbjct: 4   QVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSS--NEHSAYVTFKETQGAETAVLL 61

Query: 62  SGATIVDQIVSITPVENYVPNREMLEVTVVENAINVAPEHVSLNIEEEKPSSPSSVNGRV 121
           SGA+I DQ V I    NY P                AP        E + S   SV    
Sbjct: 62  SGASIADQSVIIELAPNYSPP--------------AAPH------AETQSSGAESV---- 97

Query: 122 YLSRAQVAVSSMLAKGSAIKQDAVNKAKAFDEKHQLTSNASAKVISFDKRVGLTEKLTVG 181
            + +A+  VSSMLAKG  + +DAV KAKAFDEKH  TS A+A V S D+++GL++KLT G
Sbjct: 98  -VQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAG 156

Query: 182 LSAMNEKVKSVDQRLHVSDKTMAAIFAAERKLNDTGSAVKTSRYVTAGTSWLNGAFSKVA 241
            S +NEK+K+VDQ   V+++T +   AAE+ ++  GSAV  +RYV  G SW  GAF++VA
Sbjct: 157 TSLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVA 216

Query: 242 KVGHVASTRTREK 254
           +       +T+EK
Sbjct: 217 QAAGEVGQKTKEK 229


>AT5G16840.3 | Symbols: BPA1 | binding partner of acd11 1 |
           chr5:5536042-5538026 FORWARD LENGTH=257
          Length = 257

 Score =  183 bits (465), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 109/254 (42%), Positives = 150/254 (59%), Gaps = 28/254 (11%)

Query: 1   MQTRTVQVKQVSDLVGEREIHEFFSFSGEIEHVEILSEYGKSKTAFVTFKDAKALEIALL 60
           M  R+V+V  +S    E +I EFFSFSGE+E ++I S      +A+VTFK+ +  E A+L
Sbjct: 1   MAVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQS---NEHSAYVTFKETQGAETAVL 57

Query: 61  LSGATIVDQIVSITPVENYVPNREMLEVTVVENAINVAPEHVSLNIEEEKPSSPSSVNGR 120
           LSGA+I DQ V I    NY P                AP        E + S   SV   
Sbjct: 58  LSGASIADQSVIIELAPNYSPP--------------AAPH------AETQSSGAESV--- 94

Query: 121 VYLSRAQVAVSSMLAKGSAIKQDAVNKAKAFDEKHQLTSNASAKVISFDKRVGLTEKLTV 180
             + +A+  VSSMLAKG  + +DAV KAKAFDEKH  TS A+A V S D+++GL++KLT 
Sbjct: 95  --VQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTA 152

Query: 181 GLSAMNEKVKSVDQRLHVSDKTMAAIFAAERKLNDTGSAVKTSRYVTAGTSWLNGAFSKV 240
           G S +NEK+K+VDQ   V+++T +   AAE+ ++  GSAV  +RYV  G SW  GAF++V
Sbjct: 153 GTSLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRV 212

Query: 241 AKVGHVASTRTREK 254
           A+       +T+EK
Sbjct: 213 AQAAGEVGQKTKEK 226


>AT1G67950.3 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr1:25478884-25480420 REVERSE LENGTH=279
          Length = 279

 Score =  176 bits (445), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 95/239 (39%), Positives = 151/239 (63%), Gaps = 23/239 (9%)

Query: 4   RTVQVKQVSDLVGEREIHEFFSFSGEIEHVEILSEYGKSKTAFVTFKDAKALEIALLLSG 63
           +TV++  VS +V ++++ EFFSFSG+I++VE+ SE  +S+ A+VTFKD++  E A+LL+G
Sbjct: 29  KTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAETAMLLTG 88

Query: 64  ATIVDQIVSITPVENYVPNREMLEVTVVENAINVAPEHVSLNIEEEKPSSPSSVNGRVYL 123
           A I D  VSITP  NY                 + PE ++L+ +E       S NG   +
Sbjct: 89  AVIADLRVSITPAVNY----------------QLPPEALALDSQEH------SFNG-FSV 125

Query: 124 SRAQVAVSSMLAKGSAIKQDAVNKAKAFDEKHQLTSNASAKVISFDKRVGLTEKLTVGLS 183
            +A+  V+ M+ +G A+ +DA+ KAKAFD++H L SNASA + S D ++GL+EKL++G +
Sbjct: 126 KKAEDVVNIMVGRGYALGKDAMEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTT 185

Query: 184 AMNEKVKSVDQRLHVSDKTMAAIFAAERKLNDTGSAVKTSRYVTAGTSWLNGAFSKVAK 242
            +NEK++ +D+R  V + T +A+ AAE       +A+  + YV++G SW + AF  V K
Sbjct: 186 VVNEKLRDIDERYQVREITKSALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTK 244


>AT1G67950.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr1:25478884-25480420 REVERSE LENGTH=278
          Length = 278

 Score =  175 bits (443), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 95/239 (39%), Positives = 150/239 (62%), Gaps = 24/239 (10%)

Query: 4   RTVQVKQVSDLVGEREIHEFFSFSGEIEHVEILSEYGKSKTAFVTFKDAKALEIALLLSG 63
           +TV++  VS +V ++++ EFFSFSG+I++VE+ SE  +S+ A+VTFKD++  E A+LL+G
Sbjct: 29  KTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAETAMLLTG 88

Query: 64  ATIVDQIVSITPVENYVPNREMLEVTVVENAINVAPEHVSLNIEEEKPSSPSSVNGRVYL 123
           A I D  VSITP  NY                 + PE ++L+ E        S NG   +
Sbjct: 89  AVIADLRVSITPAVNY----------------QLPPEALALDSEH-------SFNG-FSV 124

Query: 124 SRAQVAVSSMLAKGSAIKQDAVNKAKAFDEKHQLTSNASAKVISFDKRVGLTEKLTVGLS 183
            +A+  V+ M+ +G A+ +DA+ KAKAFD++H L SNASA + S D ++GL+EKL++G +
Sbjct: 125 KKAEDVVNIMVGRGYALGKDAMEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTT 184

Query: 184 AMNEKVKSVDQRLHVSDKTMAAIFAAERKLNDTGSAVKTSRYVTAGTSWLNGAFSKVAK 242
            +NEK++ +D+R  V + T +A+ AAE       +A+  + YV++G SW + AF  V K
Sbjct: 185 VVNEKLRDIDERYQVREITKSALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTK 243


>AT1G67950.2 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr1:25478884-25480072 REVERSE LENGTH=279
          Length = 279

 Score =  175 bits (443), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 95/239 (39%), Positives = 150/239 (62%), Gaps = 24/239 (10%)

Query: 4   RTVQVKQVSDLVGEREIHEFFSFSGEIEHVEILSEYGKSKTAFVTFKDAKALEIALLLSG 63
           +TV++  VS +V ++++ EFFSFSG+I++VE+ SE  +S+ A+VTFKD++  E A+LL+G
Sbjct: 30  KTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAETAMLLTG 89

Query: 64  ATIVDQIVSITPVENYVPNREMLEVTVVENAINVAPEHVSLNIEEEKPSSPSSVNGRVYL 123
           A I D  VSITP  NY                 + PE ++L+ E        S NG   +
Sbjct: 90  AVIADLRVSITPAVNY----------------QLPPEALALDSEH-------SFNG-FSV 125

Query: 124 SRAQVAVSSMLAKGSAIKQDAVNKAKAFDEKHQLTSNASAKVISFDKRVGLTEKLTVGLS 183
            +A+  V+ M+ +G A+ +DA+ KAKAFD++H L SNASA + S D ++GL+EKL++G +
Sbjct: 126 KKAEDVVNIMVGRGYALGKDAMEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTT 185

Query: 184 AMNEKVKSVDQRLHVSDKTMAAIFAAERKLNDTGSAVKTSRYVTAGTSWLNGAFSKVAK 242
            +NEK++ +D+R  V + T +A+ AAE       +A+  + YV++G SW + AF  V K
Sbjct: 186 VVNEKLRDIDERYQVREITKSALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTK 244


>AT1G67950.4 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr1:25478884-25479778 REVERSE LENGTH=219
          Length = 219

 Score =  140 bits (353), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 80/206 (38%), Positives = 123/206 (59%), Gaps = 24/206 (11%)

Query: 37  SEYGKSKTAFVTFKDAKALEIALLLSGATIVDQIVSITPVENYVPNREMLEVTVVENAIN 96
           SE  +S+ A+VTFKD++  E A+LL+GA I D  VSITP  NY                 
Sbjct: 3   SETQESQVAYVTFKDSQGAETAMLLTGAVIADLRVSITPAVNY----------------Q 46

Query: 97  VAPEHVSLNIEEEKPSSPSSVNGRVYLSRAQVAVSSMLAKGSAIKQDAVNKAKAFDEKHQ 156
           + PE ++L+ E        S NG   + +A+  V+ M+ +G A+ +DA+ KAKAFD++H 
Sbjct: 47  LPPEALALDSEH-------SFNG-FSVKKAEDVVNIMVGRGYALGKDAMEKAKAFDDRHN 98

Query: 157 LTSNASAKVISFDKRVGLTEKLTVGLSAMNEKVKSVDQRLHVSDKTMAAIFAAERKLNDT 216
           L SNASA + S D ++GL+EKL++G + +NEK++ +D+R  V + T +A+ AAE      
Sbjct: 99  LISNASATIASLDDKMGLSEKLSIGTTVVNEKLRDIDERYQVREITKSALAAAEETAISA 158

Query: 217 GSAVKTSRYVTAGTSWLNGAFSKVAK 242
            +A+  + YV++G SW + AF  V K
Sbjct: 159 RTALMANPYVSSGASWFSNAFGAVTK 184


>AT1G14340.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr1:4897709-4898776 FORWARD LENGTH=244
          Length = 244

 Score =  137 bits (344), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/249 (36%), Positives = 135/249 (54%), Gaps = 21/249 (8%)

Query: 6   VQVKQVSDLVGEREIHEFFSFSGEIEHVEILSEYGKSKTAFVTFKDAKALEIALLLSGAT 65
           V+V  +S  V   ++ +FFSFSG I+ ++I+    ++ TA+V FKD+ + E A+LL+GAT
Sbjct: 9   VEVTGLSPSVTHNDLIDFFSFSGTIQDIDIVRSGEQACTAYVMFKDSYSQETAVLLTGAT 68

Query: 66  IVDQIVSITPVENYVPNREMLEVTVVENAINVAPEHVSLNIEEEKPSSP----SSVNGRV 121
           I+DQ V IT    +    +    T             S   E+E  S      S  N   
Sbjct: 69  ILDQRVCITRWGQHHEEFDFWNAT-------------SRGFEDESDSQHYAQRSEFNAGE 115

Query: 122 YLSRAQVAVSSMLAKGSAIKQDAVNKAKAFDEKHQLTSNASAKVISFDKRVGLTEKLTVG 181
            +++AQ  V  MLA G  + +DA++KAKAFDE H +++ A A+V   ++R+GLT+K+  G
Sbjct: 116 AVTKAQEVVKIMLATGFVLGKDALSKAKAFDESHGVSAAAVARVSQLEQRIGLTDKIFTG 175

Query: 182 LSAMNEKVKSVDQRLHVSDKTMAAIFAAERKLNDTGSAVKTSRYVTAGTSWLNGAFSKVA 241
           L    E V+  DQR HVSD   +A+FA  R      ++V  S Y ++G  WL+GA  + A
Sbjct: 176 L----EAVRMTDQRYHVSDTAKSAVFATGRTAAAAATSVVNSSYFSSGALWLSGALERAA 231

Query: 242 KVGHVASTR 250
           K      TR
Sbjct: 232 KAASDLGTR 240


>AT3G01210.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr3:72182-73159 FORWARD LENGTH=249
          Length = 249

 Score =  115 bits (288), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 122/251 (48%), Gaps = 42/251 (16%)

Query: 7   QVKQVSDLVGEREIHEFFSFSGEIEHVEILSEYGKSKTAFVTFKDAKALEIALLLSGATI 66
           QV  +S    E+++H FFS  G +E VEI    G + TA+VTF+DA AL++A+LLSGATI
Sbjct: 9   QVTNLSPQATEKDVHRFFSHCGIVELVEITGCQGDALTAYVTFRDAYALDMAVLLSGATI 68

Query: 67  VDQIVSITPVENYVPNREMLEVTVVENAINVAPEHVSLNIEEEKPSSPSSVNGRVYLSR- 125
           VDQ V I+    Y+                    H S N+ +E+  S +      + S  
Sbjct: 69  VDQTVWISVYGVYL--------------------HESNNLRQEEDYSVTVTRSDAFASSP 108

Query: 126 ------AQVAVSSMLAKGSAIKQDAVNKAKAFDEKHQLTSNASAKVISFDKRVGLTEKLT 179
                 AQ  V +MLAKG  + +DA+ KAKA DE  + +S  + K+      +GLT+ + 
Sbjct: 109 GEAITVAQQVVQTMLAKGYVLSKDAIGKAKALDESQRFSSLVATKLAEISHYLGLTQNIQ 168

Query: 180 VGLSAMNEKVKSVDQRLHVSDKTMAAIF-----------AAERKLNDTGSAVKTSRYVTA 228
              S+M E V+S D++ H SD T +A+               +      ++V  SRY   
Sbjct: 169 ---SSM-ELVRSADEKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFAN 224

Query: 229 GTSWLNGAFSK 239
           G  W + A  +
Sbjct: 225 GALWFSDALGR 235