Miyakogusa Predicted Gene

Lj1g3v3975280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3975280.1 Non Chatacterized Hit- tr|I1QIL6|I1QIL6_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,32.74,9e-19,PROTEIN DISULFIDE ISOMERASE,NULL;
Thioredoxin-like,Thioredoxin-like fold; no
description,Thioredoxin,CUFF.31646.1
         (289 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G03860.1 | Symbols: ATAPRL5, APRL5 | APR-like 5 | chr3:992465...   241   3e-64
AT5G18120.1 | Symbols: ATAPRL7, APRL7 | APR-like 7 | chr5:599138...   237   7e-63
AT1G34780.1 | Symbols: ATAPRL4, APRL4 | APR-like 4 | chr1:127488...   119   2e-27
AT4G08930.1 | Symbols: ATAPRL6, APRL6 | APR-like 6 | chr4:572951...   104   8e-23
AT1G34780.2 | Symbols: ATAPRL4, APRL4 | APR-like 4 | chr1:127488...    85   7e-17

>AT3G03860.1 | Symbols: ATAPRL5, APRL5 | APR-like 5 |
           chr3:992465-994315 FORWARD LENGTH=300
          Length = 300

 Score =  241 bits (616), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 108/237 (45%), Positives = 170/237 (71%), Gaps = 2/237 (0%)

Query: 37  CSLAITPNPPLQVDGNFVERVLSGRKRVGYISILFYASWCPFSRRMLSEFEILSSMFPQV 96
           C  ++ P PP++VDG+ ++R+++ +    Y+S+LFYASWCPFSR +  +F++LSSMFPQ+
Sbjct: 47  CPPSLYPTPPIEVDGDSLDRLMASQHGNAYMSVLFYASWCPFSRAVRPKFDMLSSMFPQI 106

Query: 97  EHVALEQSSALPSLYSKYRIHSLPAILLVNQTSRVRYLGAKNLNSIVEFYERNTGFQARD 156
           +H+A+E S ALPS++S+Y IHSLP+IL+VNQT   RY G K+L S++EFYE  TG Q   
Sbjct: 107 QHLAVEHSQALPSVFSRYGIHSLPSILMVNQTLNARYHGRKDLISLIEFYEEATGLQPVQ 166

Query: 157 HIDSGHLSSLMSDEHSNVSFM--GFSLKELSSREPYLAVSILFLCLRIILFVFPEIMPHL 214
           ++  G  + L + + + ++++  G S++E+  ++P+L +S+LF+CL++ + VFP     +
Sbjct: 167 YVAEGEPTGLNAGDGNLITWLRKGTSIREIFKQDPFLVLSLLFICLQMAILVFPIAESRM 226

Query: 215 QAFWDSYAPRLNLQIFGETSQVIGRVLNLIDVRSVWTKLRLCKTRNFHERARSVRVW 271
           +A W SY   LNL  FGE SQ+  R ++++DVR +W KL L KTRNFHERA++ + W
Sbjct: 227 RALWASYVANLNLGRFGEISQLFNRGIHMVDVRRLWLKLSLVKTRNFHERAKNAQAW 283


>AT5G18120.1 | Symbols: ATAPRL7, APRL7 | APR-like 7 |
           chr5:5991385-5993696 FORWARD LENGTH=289
          Length = 289

 Score =  237 bits (605), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 107/234 (45%), Positives = 169/234 (72%), Gaps = 3/234 (1%)

Query: 37  CSLAITPNPPLQVDGNFVERVLSGRKRVGYISILFYASWCPFSRRMLSEFEILSSMFPQV 96
           C  ++ P+PP++VDG+ +++++       YISILFY S CPFSR +  +F++LSSMFP +
Sbjct: 43  CPRSLYPSPPIEVDGDLLDKLMDANHGNAYISILFYTSRCPFSRAVRPKFDVLSSMFPHI 102

Query: 97  EHVALEQSSALPSLYSKYRIHSLPAILLVNQTSRVRYLGAKNLNSIVEFYERNTGFQARD 156
            H+ +EQS ALPS++S+Y IHSLP+IL+VNQT ++RY G K+L S+++FY+  TG +   
Sbjct: 103 THLIVEQSQALPSVFSRYGIHSLPSILMVNQTMKMRYHGPKDLASLIQFYKETTGLKPVQ 162

Query: 157 HIDSGHLSSLMSDEHSNVSFM--GFSLKELSSREPYLAVSILFLCLRIILFVFPEIMPHL 214
           ++D G  +SL +D +  ++++  G S++E++ REPY+ ++++FL L++ + +FP +   L
Sbjct: 163 YMDEGEPTSLDTDGNL-ITWLHNGSSIREIAEREPYMVLALMFLSLKLAILIFPIMGSRL 221

Query: 215 QAFWDSYAPRLNLQIFGETSQVIGRVLNLIDVRSVWTKLRLCKTRNFHERARSV 268
           +  W  Y P L+L I GETSQ+ GR L++IDVR +W KLRL KTRNF ERA++ 
Sbjct: 222 KTLWALYVPHLSLGILGETSQLFGRALHMIDVRRLWIKLRLTKTRNFQERAKNA 275


>AT1G34780.1 | Symbols: ATAPRL4, APRL4 | APR-like 4 |
           chr1:12748835-12750124 REVERSE LENGTH=310
          Length = 310

 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 101/175 (57%), Gaps = 7/175 (4%)

Query: 61  RKRVGYISILFYASWCPFSRRMLSEFEILSSMFPQVEHVALEQSSALPSLYSKYRIHSLP 120
           + +  Y+++LFYASWCPFSR     F+++SS++  + H A+++SS  PS  SKY +H  P
Sbjct: 78  KNKCDYVALLFYASWCPFSRSFRPSFDVISSLYSSIPHFAIKESSIKPSTLSKYGVHGFP 137

Query: 121 AILLVNQTSRVRYLGAKNLNSIVEFYERNTGFQARDH------IDSGHLSSLMSDEHSNV 174
            +LL+N T R RY G + L+S+V FY   TG +  D       +   HL +  + E  N 
Sbjct: 138 TLLLLNSTMRARYRGTRMLDSLVAFYSDVTGIETLDKTSLERSVSVPHLGNENNTEPENC 197

Query: 175 SFM-GFSLKELSSREPYLAVSILFLCLRIILFVFPEIMPHLQAFWDSYAPRLNLQ 228
            F    S + +  +E YLA++I+F+ LR++  ++P ++  ++  W   A  + L+
Sbjct: 198 PFTWARSPENMLRQETYLALAIVFVLLRLLHLIYPTLVVFMKFTWRRIAQNMRLE 252


>AT4G08930.1 | Symbols: ATAPRL6, APRL6 | APR-like 6 |
           chr4:5729511-5730724 FORWARD LENGTH=295
          Length = 295

 Score =  104 bits (259), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 22/229 (9%)

Query: 47  LQVDGNFVERVLSGRKRVGYISILFYASWCPFSRRMLSEFEILSSMFPQVEHVALEQSSA 106
           LQ+  + V++    + +  Y ++LFYASWCPFSR +   F+++S ++  V H A+E+SS 
Sbjct: 61  LQMAADMVDK----KNKCDYAALLFYASWCPFSRLVRPSFDLMSLLYSSVPHFAIEESSV 116

Query: 107 LPSLYSKYRIHSLPAILLVNQTSRVRYLGAKNLNSIVEFYERNTGFQARDH--IDSGHLS 164
             S  SKY +H  P I+L+N T  V Y G++ L+S+V FY   TG +  D   ++   L 
Sbjct: 117 KASTLSKYGVHGFPTIILMNSTMLVVYRGSRTLDSLVAFYTDVTGIETMDERWVERNRLV 176

Query: 165 SLMSDEHSNVSF--MGFSLKELSSREPYLAVSILFLCLRIILFVFPEIMPHLQAFWDSYA 222
                E  N  F     S + L  +E YL ++ +F+ LR++  + P ++  ++  W   +
Sbjct: 177 PHFHAEPENCPFPWARRSPENLLRQETYLTLATVFVLLRLLHLISPTMVVFVKFTWGRVS 236

Query: 223 PRLNLQIFGETSQVIGRVLNLIDVRSVWTKLRLCKTRNFHERARSVRVW 271
              N+++       +   L              C + N  E A + R W
Sbjct: 237 ---NMRLGNPLEHTVTMYLK-----------EPCMSSNLQEGAMNARAW 271


>AT1G34780.2 | Symbols: ATAPRL4, APRL4 | APR-like 4 |
           chr1:12748835-12750124 REVERSE LENGTH=281
          Length = 281

 Score = 84.7 bits (208), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 36/175 (20%)

Query: 61  RKRVGYISILFYASWCPFSRRMLSEFEILSSMFPQVEHVALEQSSALPSLYSKYRIHSLP 120
           + +  Y+++LFYASWCPFS                             S  SKY +H  P
Sbjct: 78  KNKCDYVALLFYASWCPFS-----------------------------STLSKYGVHGFP 108

Query: 121 AILLVNQTSRVRYLGAKNLNSIVEFYERNTGFQARDH------IDSGHLSSLMSDEHSNV 174
            +LL+N T R RY G + L+S+V FY   TG +  D       +   HL +  + E  N 
Sbjct: 109 TLLLLNSTMRARYRGTRMLDSLVAFYSDVTGIETLDKTSLERSVSVPHLGNENNTEPENC 168

Query: 175 SFM-GFSLKELSSREPYLAVSILFLCLRIILFVFPEIMPHLQAFWDSYAPRLNLQ 228
            F    S + +  +E YLA++I+F+ LR++  ++P ++  ++  W   A  + L+
Sbjct: 169 PFTWARSPENMLRQETYLALAIVFVLLRLLHLIYPTLVVFMKFTWRRIAQNMRLE 223