Miyakogusa Predicted Gene

Lj1g3v3975110.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3975110.2 tr|C6TDZ0|C6TDZ0_SOYBN Glutamate dehydrogenase
OS=Glycine max GN=Gma.1419 PE=2 SV=1,93.67,0,NAD(P)-binding
Rossmann-fold domains,NULL; Aminoacid dehydrogenase-like, N-terminal
domain,NULL; GLF,CUFF.31638.2
         (411 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G18170.1 | Symbols: GDH1 | glutamate dehydrogenase 1 | chr5:6...   785   0.0  
AT3G03910.1 | Symbols: GDH3 | glutamate dehydrogenase 3 | chr3:1...   773   0.0  
AT5G07440.2 | Symbols: GDH2 | glutamate dehydrogenase 2 | chr5:2...   712   0.0  
AT5G07440.1 | Symbols: GDH2 | glutamate dehydrogenase 2 | chr5:2...   712   0.0  
AT5G07440.3 | Symbols: GDH2 | glutamate dehydrogenase 2 | chr5:2...   504   e-143
AT1G51720.1 | Symbols:  | Amino acid dehydrogenase family protei...   137   2e-32

>AT5G18170.1 | Symbols: GDH1 | glutamate dehydrogenase 1 |
           chr5:6006172-6008248 FORWARD LENGTH=411
          Length = 411

 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/411 (90%), Positives = 395/411 (96%)

Query: 1   MNALAATNRNFRLASRLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLQSYVGFRIQHDN 60
           MNALAATNRNF+LA+RLLGLDSKLEKSLLIPFREIKVECTIPKDDGTL S+VGFR+QHDN
Sbjct: 1   MNALAATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDN 60

Query: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGELSISELERL 120
           ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA IPYGGAKGGIGC+P +LSISELERL
Sbjct: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAKIPYGGAKGGIGCDPSKLSISELERL 120

Query: 121 TRVFTQKIHDLIGTHTDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLG 180
           TRVFTQKIHDLIG HTDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLG 180

Query: 181 RDAATGRGVLFATEALLNEHGKSVSGQRFVIQGFGNVGSWAAQLISEKGGKVVAVSDVTG 240
           RDAATGRGV+F TEALLNEHGK++SGQRFVIQGFGNVGSWAA+LISEKGGK+VAVSD+TG
Sbjct: 181 RDAATGRGVMFGTEALLNEHGKTISGQRFVIQGFGNVGSWAAKLISEKGGKIVAVSDITG 240

Query: 241 AIKNSEGIDIPSLLQHSKEHKGVKGFHGGDTIDPQSILVEDCDVLIPAALGGVINRENAN 300
           AIKN +GIDIP+LL+H+KEH+GVKGF G D IDP SILVEDCD+L+PAALGGVINRENAN
Sbjct: 241 AIKNKDGIDIPALLKHTKEHRGVKGFDGADPIDPNSILVEDCDILVPAALGGVINRENAN 300

Query: 301 EIKAKFIVEAANHPTDPEADEILRKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEE 360
           EIKAKFI+EAANHPTDP+ADEIL KKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEE
Sbjct: 301 EIKAKFIIEAANHPTDPDADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEE 360

Query: 361 KVNNELKKYMTRGFKDVKEMCKTHECDFRMGAFTLGVNRVARATLLRGWEA 411
           KVN+ELK YMTR FKD+KEMCKTH CD RMGAFTLGVNRVA+AT+LRGW A
Sbjct: 361 KVNDELKTYMTRSFKDLKEMCKTHSCDLRMGAFTLGVNRVAQATILRGWGA 411


>AT3G03910.1 | Symbols: GDH3 | glutamate dehydrogenase 3 |
           chr3:1006913-1008846 FORWARD LENGTH=411
          Length = 411

 Score =  773 bits (1995), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/409 (88%), Positives = 393/409 (96%)

Query: 1   MNALAATNRNFRLASRLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLQSYVGFRIQHDN 60
           MNALAATNRNF+LASRLLGLDSKLEKSLLIPFREIKVECTIPKDDGTL S+VGFR+QHDN
Sbjct: 1   MNALAATNRNFKLASRLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDN 60

Query: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGELSISELERL 120
           ARGPMKGGIRYHPEV+PDEVNALAQLMTWKTAVA IPYGGAKGGIGC+P ELS+SELERL
Sbjct: 61  ARGPMKGGIRYHPEVEPDEVNALAQLMTWKTAVAKIPYGGAKGGIGCDPSELSLSELERL 120

Query: 121 TRVFTQKIHDLIGTHTDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLG 180
           TRVFTQKIHDLIG HTDVPAPDMGTGPQTMAWILDEYSKFHG+SPAVVTGKPIDLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180

Query: 181 RDAATGRGVLFATEALLNEHGKSVSGQRFVIQGFGNVGSWAAQLISEKGGKVVAVSDVTG 240
           RDAATGRGVLFATEALLNEHGK++SGQRF IQGFGNVGSWAA+LIS+KGGK+VAVSDVTG
Sbjct: 181 RDAATGRGVLFATEALLNEHGKTISGQRFAIQGFGNVGSWAAKLISDKGGKIVAVSDVTG 240

Query: 241 AIKNSEGIDIPSLLQHSKEHKGVKGFHGGDTIDPQSILVEDCDVLIPAALGGVINRENAN 300
           AIKN+ GIDI SLL+H++E++G+KGF G D+IDP SILVEDCD+L+PAALGGVINRENAN
Sbjct: 241 AIKNNNGIDILSLLEHAEENRGIKGFDGADSIDPDSILVEDCDILVPAALGGVINRENAN 300

Query: 301 EIKAKFIVEAANHPTDPEADEILRKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEE 360
           EIKAKFI+E ANHPTDPEADEIL+KKGV+ILPDIYANSGGVTVSYFEWVQNIQGFMW+EE
Sbjct: 301 EIKAKFIIEGANHPTDPEADEILKKKGVMILPDIYANSGGVTVSYFEWVQNIQGFMWDEE 360

Query: 361 KVNNELKKYMTRGFKDVKEMCKTHECDFRMGAFTLGVNRVARATLLRGW 409
           KVN ELK YMTRGFKD+KEMC+TH CD RMGAFTLG+NRVA+AT +RGW
Sbjct: 361 KVNRELKTYMTRGFKDLKEMCQTHSCDLRMGAFTLGINRVAQATTIRGW 409


>AT5G07440.2 | Symbols: GDH2 | glutamate dehydrogenase 2 |
           chr5:2356153-2358012 FORWARD LENGTH=411
          Length = 411

 Score =  712 bits (1838), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/411 (81%), Positives = 374/411 (90%)

Query: 1   MNALAATNRNFRLASRLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLQSYVGFRIQHDN 60
           MNALAATNRNFR ASR+LGLDSK+E+SL+IPFREIKVECTIPKDDGTL SY+GFR+QHDN
Sbjct: 1   MNALAATNRNFRHASRILGLDSKIERSLMIPFREIKVECTIPKDDGTLVSYIGFRVQHDN 60

Query: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGELSISELERL 120
           ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA+IPYGGAKGGIGC+P +LS+SELERL
Sbjct: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPRDLSLSELERL 120

Query: 121 TRVFTQKIHDLIGTHTDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLG 180
           TRVFTQKIHDLIG HTDVPAPDMGT  QTMAWILDEYSKFHG+SPAVVTGKPIDLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180

Query: 181 RDAATGRGVLFATEALLNEHGKSVSGQRFVIQGFGNVGSWAAQLISEKGGKVVAVSDVTG 240
           R+AATGRGV+FATEALL E+GKS+ G  FVIQGFGNVG+WAA+LI EKGGKVVAVSD+TG
Sbjct: 181 REAATGRGVVFATEALLAEYGKSIQGLTFVIQGFGNVGTWAAKLIHEKGGKVVAVSDITG 240

Query: 241 AIKNSEGIDIPSLLQHSKEHKGVKGFHGGDTIDPQSILVEDCDVLIPAALGGVINRENAN 300
           AI+N EGIDI +L++H      +  F+GGD ++   +L+ +CDVLIP ALGGV+N+ENA 
Sbjct: 241 AIRNPEGIDINALIKHKDATGSLNDFNGGDAMNSDELLIHECDVLIPCALGGVLNKENAG 300

Query: 301 EIKAKFIVEAANHPTDPEADEILRKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEE 360
           ++KAKFIVEAANHPTDP+ADEIL KKGV+ILPDIYAN+GGVTVSYFEWVQNIQGFMWEEE
Sbjct: 301 DVKAKFIVEAANHPTDPDADEILSKKGVIILPDIYANAGGVTVSYFEWVQNIQGFMWEEE 360

Query: 361 KVNNELKKYMTRGFKDVKEMCKTHECDFRMGAFTLGVNRVARATLLRGWEA 411
           KVN EL+KYMTR F ++K MC TH C+ RMGAFTLGVNRVARAT LRGWEA
Sbjct: 361 KVNLELQKYMTRAFHNIKTMCHTHSCNLRMGAFTLGVNRVARATQLRGWEA 411


>AT5G07440.1 | Symbols: GDH2 | glutamate dehydrogenase 2 |
           chr5:2356153-2358012 FORWARD LENGTH=411
          Length = 411

 Score =  712 bits (1838), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/411 (81%), Positives = 374/411 (90%)

Query: 1   MNALAATNRNFRLASRLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLQSYVGFRIQHDN 60
           MNALAATNRNFR ASR+LGLDSK+E+SL+IPFREIKVECTIPKDDGTL SY+GFR+QHDN
Sbjct: 1   MNALAATNRNFRHASRILGLDSKIERSLMIPFREIKVECTIPKDDGTLVSYIGFRVQHDN 60

Query: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGELSISELERL 120
           ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA+IPYGGAKGGIGC+P +LS+SELERL
Sbjct: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPRDLSLSELERL 120

Query: 121 TRVFTQKIHDLIGTHTDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLG 180
           TRVFTQKIHDLIG HTDVPAPDMGT  QTMAWILDEYSKFHG+SPAVVTGKPIDLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180

Query: 181 RDAATGRGVLFATEALLNEHGKSVSGQRFVIQGFGNVGSWAAQLISEKGGKVVAVSDVTG 240
           R+AATGRGV+FATEALL E+GKS+ G  FVIQGFGNVG+WAA+LI EKGGKVVAVSD+TG
Sbjct: 181 REAATGRGVVFATEALLAEYGKSIQGLTFVIQGFGNVGTWAAKLIHEKGGKVVAVSDITG 240

Query: 241 AIKNSEGIDIPSLLQHSKEHKGVKGFHGGDTIDPQSILVEDCDVLIPAALGGVINRENAN 300
           AI+N EGIDI +L++H      +  F+GGD ++   +L+ +CDVLIP ALGGV+N+ENA 
Sbjct: 241 AIRNPEGIDINALIKHKDATGSLNDFNGGDAMNSDELLIHECDVLIPCALGGVLNKENAG 300

Query: 301 EIKAKFIVEAANHPTDPEADEILRKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEE 360
           ++KAKFIVEAANHPTDP+ADEIL KKGV+ILPDIYAN+GGVTVSYFEWVQNIQGFMWEEE
Sbjct: 301 DVKAKFIVEAANHPTDPDADEILSKKGVIILPDIYANAGGVTVSYFEWVQNIQGFMWEEE 360

Query: 361 KVNNELKKYMTRGFKDVKEMCKTHECDFRMGAFTLGVNRVARATLLRGWEA 411
           KVN EL+KYMTR F ++K MC TH C+ RMGAFTLGVNRVARAT LRGWEA
Sbjct: 361 KVNLELQKYMTRAFHNIKTMCHTHSCNLRMGAFTLGVNRVARATQLRGWEA 411


>AT5G07440.3 | Symbols: GDH2 | glutamate dehydrogenase 2 |
           chr5:2356153-2357546 FORWARD LENGTH=309
          Length = 309

 Score =  504 bits (1299), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 238/296 (80%), Positives = 269/296 (90%)

Query: 1   MNALAATNRNFRLASRLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLQSYVGFRIQHDN 60
           MNALAATNRNFR ASR+LGLDSK+E+SL+IPFREIKVECTIPKDDGTL SY+GFR+QHDN
Sbjct: 1   MNALAATNRNFRHASRILGLDSKIERSLMIPFREIKVECTIPKDDGTLVSYIGFRVQHDN 60

Query: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGELSISELERL 120
           ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA+IPYGGAKGGIGC+P +LS+SELERL
Sbjct: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPRDLSLSELERL 120

Query: 121 TRVFTQKIHDLIGTHTDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLG 180
           TRVFTQKIHDLIG HTDVPAPDMGT  QTMAWILDEYSKFHG+SPAVVTGKPIDLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180

Query: 181 RDAATGRGVLFATEALLNEHGKSVSGQRFVIQGFGNVGSWAAQLISEKGGKVVAVSDVTG 240
           R+AATGRGV+FATEALL E+GKS+ G  FVIQGFGNVG+WAA+LI EKGGKVVAVSD+TG
Sbjct: 181 REAATGRGVVFATEALLAEYGKSIQGLTFVIQGFGNVGTWAAKLIHEKGGKVVAVSDITG 240

Query: 241 AIKNSEGIDIPSLLQHSKEHKGVKGFHGGDTIDPQSILVEDCDVLIPAALGGVINR 296
           AI+N EGIDI +L++H      +  F+GGD ++   +L+ +CDVLIP ALGGV+N+
Sbjct: 241 AIRNPEGIDINALIKHKDATGSLNDFNGGDAMNSDELLIHECDVLIPCALGGVLNK 296


>AT1G51720.1 | Symbols:  | Amino acid dehydrogenase family protein |
           chr1:19181741-19186297 FORWARD LENGTH=637
          Length = 637

 Score =  137 bits (344), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 166/364 (45%), Gaps = 22/364 (6%)

Query: 28  LLIPFREIKVECTIPKDDGTLQSYVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLM 87
           LL P R I        D G      GFR+Q + A GP +GGIR+HP ++      L    
Sbjct: 239 LLEPERMIVFRVPWIDDRGETHVNRGFRVQFNQALGPCRGGIRFHPSMNLSIAKFLGFQQ 298

Query: 88  TWKTAVANIPYGGAKGGIGCNPGELSISELERLTRVFTQKIHDLIGTHTDVPAPDMGTGP 147
           T K A++    GGA GG   +P   S +E+ R  + F  +++  +G   D+P+ ++G G 
Sbjct: 299 TLKNALSPYKLGGASGGSDFDPKGKSDNEIMRFCQSFMNEMYRYMGPDKDLPSEEVGVGT 358

Query: 148 QTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKSVSGQ 207
           + M ++  +Y +  G      TG  I    S  R  A+G GV++    +L +  K + G 
Sbjct: 359 REMGYLFGQYRRLAGQFQGSFTGPRIYWAASSLRTEASGYGVVYFARLILADMNKEIKGL 418

Query: 208 RFVIQGFGNVGSWAAQLISEKGGKVVAVSDVTGAIKNSEGIDI-------------PSLL 254
           R V+ G G +     + +   G   V VSD  G + + +G D               SL 
Sbjct: 419 RCVVSGCGKIAMHVVEKLIACGAHPVTVSDSKGYLVDDDGFDYMKLAFLRDIKSQQRSLR 478

Query: 255 QHSKEHKGVKGFHGGDTIDPQSILVEDCDVLIPAALGGVINRENA-NEIKA--KFIVEAA 311
            +SK +   K F   D + P +   E CDV  P A    +++ +A N + A  + +VE +
Sbjct: 479 DYSKTYARAKYF---DELKPWN---ERCDVAFPCASQNEVDQADAINLVNAGCRLLVEGS 532

Query: 312 NHPTDPEADEILRKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNNELKKYMT 371
           N P   EA ++ RK  V+I P I A +GGV     E ++      W  E   + L++ + 
Sbjct: 533 NMPCTAEAVDVFRKANVLIAPAIAAGAGGVAAGEIEVLRESNSMQWSAEDFESRLQEALK 592

Query: 372 RGFK 375
           + ++
Sbjct: 593 QTYE 596