Miyakogusa Predicted Gene
- Lj1g3v3974990.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3974990.1 Non Chatacterized Hit- tr|I1N872|I1N872_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48023
PE,70.86,0,seg,NULL; ARM repeat,Armadillo-type fold; no
description,Armadillo-like helical; SUBFAMILY NOT NAMED,CUFF.31621.1
(599 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G54385.2 | Symbols: | ARM repeat superfamily protein | chr1:... 476 e-134
AT1G54385.1 | Symbols: | ARM repeat superfamily protein | chr1:... 476 e-134
AT3G03970.2 | Symbols: | ARM repeat superfamily protein | chr3:... 286 3e-77
AT3G03970.3 | Symbols: | ARM repeat superfamily protein | chr3:... 286 3e-77
AT3G03970.1 | Symbols: | ARM repeat superfamily protein | chr3:... 286 3e-77
>AT1G54385.2 | Symbols: | ARM repeat superfamily protein |
chr1:20301289-20303048 REVERSE LENGTH=560
Length = 560
Score = 476 bits (1225), Expect = e-134, Method: Compositional matrix adjust.
Identities = 289/606 (47%), Positives = 366/606 (60%), Gaps = 60/606 (9%)
Query: 8 MGRNLSPVVRQELANLDKDADSRKSAMKALKSYVKDMDFKAVPVFLAKISETKEI----- 62
MG NL+P++RQELANLDKD +SRKSAMKALKSYVKD+D KA+P FLA++ ETKE
Sbjct: 1 MGLNLNPILRQELANLDKDTESRKSAMKALKSYVKDLDSKAIPGFLAQVFETKETNSLSG 60
Query: 63 PFTISLYEVFARVHGVKIVPLIDTIMGSIVQTLGSSGGSFSLHQACSKVVPAIAKYGIDH 122
+TISLYE+ ARVHG IVP IDTIM +IV+TL SS GSF L QACSKV+PAIA+YGID
Sbjct: 61 EYTISLYEILARVHGPNIVPQIDTIMSTIVKTLASSAGSFPLQQACSKVIPAIARYGIDP 120
Query: 123 STPEEKKRGIIHXXXXXXXXXXXXXXXXXXXGAALCLKALVESDNWRFASDEMVNRVCQN 182
+T E+KKR IIH GAALCLKALV+SDNWRFASDEMVNRVCQN
Sbjct: 121 TTTEDKKRVIIHSLCKPLTDSLLASQESLTSGAALCLKALVDSDNWRFASDEMVNRVCQN 180
Query: 183 VAVALEGKCKSQTNAHMGLVMALAKRNALIVEAYARLFIQSGLRVLNAGLAEGNSQKRLS 242
V VAL+ +QT+ MGLVM+LAK N LIVEAYARL I +GLR+L G++EGNSQKRLS
Sbjct: 181 VVVALDSN-SNQTHLQMGLVMSLAKHNPLIVEAYARLLIHTGLRILGFGVSEGNSQKRLS 239
Query: 243 AIQMVNFLMKCLDPRXXXXXXXXXXXXXXRCQSDKMAFVKGAAFEALQIAKEIAIG-KPK 301
A+QM+NFLMKCLDPR RCQSD+MA+V+GAA+EA+ +K IA + K
Sbjct: 240 AVQMLNFLMKCLDPRSIYSEVELIIKEMERCQSDQMAYVRGAAYEAMMTSKRIAAELESK 299
Query: 302 HVKSPASVTGSNLSREVNTSSGDEDHSPASVSPESRALDFLPGYESAVE-SPI---STNL 357
K SVTGSN SR N SS D+ S+SPES+ L GY+S VE SPI S N
Sbjct: 300 MEKGCRSVTGSNFSRR-NCSSIVPDY---SLSPESQTLGSFSGYDSPVESSPISHTSCNS 355
Query: 358 DYERRSVNRKLW--SNQNGVVNVSLKDGLASAVGQERGLLEHSVNHEFSNGRRELAQEFS 415
+++RRSVNRKLW GVV++SLKDGL S V + + S + E EF
Sbjct: 356 EFDRRSVNRKLWRRDENGGVVDISLKDGLFSRVTKGSTTVSDSPLVPYDTC--ENGDEFE 413
Query: 416 GFMDRNPMHGVXXXXXXXXXXXXXXISVDNIEIFTTPRKLIHSLQDSNDMNLDCSEKQNR 475
GF+ M + I+ ++ IF+TPRKLI SLQ +D++LD S+ Q+
Sbjct: 414 GFL----MESLRNTTPSPQRQRSRRINAEDFNIFSTPRKLISSLQYPDDVDLDHSDIQSP 469
Query: 476 RLRSLSYGNIDWSRTSKYDQNCFSDQVKCDCGVNESLCADVEFQGSSESVSSTNDLPGDA 535
LR I + K + +F E++SST + D
Sbjct: 470 ILRGEREKTIGSRKNPKLRK---------------------QFPTMVETMSSTITVSEDT 508
Query: 536 DVKTPSKMVPENGNAMQLQNHHMGKALQKTTFKLVCGLSFTLLAIAAPLIWINNQDE--G 593
++M+ ++ + KLV +SF ++A+ A +I + NQD+ G
Sbjct: 509 ---AQTQMITGKKKKKKM-----------SYAKLVIAISFVVVALFATVILMVNQDDDVG 554
Query: 594 HYLVPT 599
+Y VPT
Sbjct: 555 YYTVPT 560
>AT1G54385.1 | Symbols: | ARM repeat superfamily protein |
chr1:20301289-20303048 REVERSE LENGTH=560
Length = 560
Score = 476 bits (1225), Expect = e-134, Method: Compositional matrix adjust.
Identities = 289/606 (47%), Positives = 366/606 (60%), Gaps = 60/606 (9%)
Query: 8 MGRNLSPVVRQELANLDKDADSRKSAMKALKSYVKDMDFKAVPVFLAKISETKEI----- 62
MG NL+P++RQELANLDKD +SRKSAMKALKSYVKD+D KA+P FLA++ ETKE
Sbjct: 1 MGLNLNPILRQELANLDKDTESRKSAMKALKSYVKDLDSKAIPGFLAQVFETKETNSLSG 60
Query: 63 PFTISLYEVFARVHGVKIVPLIDTIMGSIVQTLGSSGGSFSLHQACSKVVPAIAKYGIDH 122
+TISLYE+ ARVHG IVP IDTIM +IV+TL SS GSF L QACSKV+PAIA+YGID
Sbjct: 61 EYTISLYEILARVHGPNIVPQIDTIMSTIVKTLASSAGSFPLQQACSKVIPAIARYGIDP 120
Query: 123 STPEEKKRGIIHXXXXXXXXXXXXXXXXXXXGAALCLKALVESDNWRFASDEMVNRVCQN 182
+T E+KKR IIH GAALCLKALV+SDNWRFASDEMVNRVCQN
Sbjct: 121 TTTEDKKRVIIHSLCKPLTDSLLASQESLTSGAALCLKALVDSDNWRFASDEMVNRVCQN 180
Query: 183 VAVALEGKCKSQTNAHMGLVMALAKRNALIVEAYARLFIQSGLRVLNAGLAEGNSQKRLS 242
V VAL+ +QT+ MGLVM+LAK N LIVEAYARL I +GLR+L G++EGNSQKRLS
Sbjct: 181 VVVALDSN-SNQTHLQMGLVMSLAKHNPLIVEAYARLLIHTGLRILGFGVSEGNSQKRLS 239
Query: 243 AIQMVNFLMKCLDPRXXXXXXXXXXXXXXRCQSDKMAFVKGAAFEALQIAKEIAIG-KPK 301
A+QM+NFLMKCLDPR RCQSD+MA+V+GAA+EA+ +K IA + K
Sbjct: 240 AVQMLNFLMKCLDPRSIYSEVELIIKEMERCQSDQMAYVRGAAYEAMMTSKRIAAELESK 299
Query: 302 HVKSPASVTGSNLSREVNTSSGDEDHSPASVSPESRALDFLPGYESAVE-SPI---STNL 357
K SVTGSN SR N SS D+ S+SPES+ L GY+S VE SPI S N
Sbjct: 300 MEKGCRSVTGSNFSRR-NCSSIVPDY---SLSPESQTLGSFSGYDSPVESSPISHTSCNS 355
Query: 358 DYERRSVNRKLW--SNQNGVVNVSLKDGLASAVGQERGLLEHSVNHEFSNGRRELAQEFS 415
+++RRSVNRKLW GVV++SLKDGL S V + + S + E EF
Sbjct: 356 EFDRRSVNRKLWRRDENGGVVDISLKDGLFSRVTKGSTTVSDSPLVPYDTC--ENGDEFE 413
Query: 416 GFMDRNPMHGVXXXXXXXXXXXXXXISVDNIEIFTTPRKLIHSLQDSNDMNLDCSEKQNR 475
GF+ M + I+ ++ IF+TPRKLI SLQ +D++LD S+ Q+
Sbjct: 414 GFL----MESLRNTTPSPQRQRSRRINAEDFNIFSTPRKLISSLQYPDDVDLDHSDIQSP 469
Query: 476 RLRSLSYGNIDWSRTSKYDQNCFSDQVKCDCGVNESLCADVEFQGSSESVSSTNDLPGDA 535
LR I + K + +F E++SST + D
Sbjct: 470 ILRGEREKTIGSRKNPKLRK---------------------QFPTMVETMSSTITVSEDT 508
Query: 536 DVKTPSKMVPENGNAMQLQNHHMGKALQKTTFKLVCGLSFTLLAIAAPLIWINNQDE--G 593
++M+ ++ + KLV +SF ++A+ A +I + NQD+ G
Sbjct: 509 ---AQTQMITGKKKKKKM-----------SYAKLVIAISFVVVALFATVILMVNQDDDVG 554
Query: 594 HYLVPT 599
+Y VPT
Sbjct: 555 YYTVPT 560
>AT3G03970.2 | Symbols: | ARM repeat superfamily protein |
chr3:1028144-1029891 REVERSE LENGTH=554
Length = 554
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/338 (47%), Positives = 212/338 (62%), Gaps = 9/338 (2%)
Query: 8 MGRNLSPVVRQELANLDKDADSRKSAMKALKSYVKDMDFKAVPVFLAKISETKEIP---- 63
MGRNL RQELANLDKD DS K+AM L+S VKD+D K V VF+A++S+ KEI
Sbjct: 1 MGRNLGSAFRQELANLDKDPDSHKTAMSNLRSIVKDLDAKVVHVFVAQLSDVKEIGLESG 60
Query: 64 -FTISLYEVFARVHGVKIVPLIDTIMGSIVQTLGSSGGSFSLHQACSKVVPAIAKYGIDH 122
+T+SL+E AR HGVKI P ID IM +I++TL SS GS + QACS+ V A+A+YGID
Sbjct: 61 GYTVSLFEDLARAHGVKIAPHIDIIMPAIIRTLSSSEGSLRVQQACSRAVAAMARYGIDP 120
Query: 123 STPEEKKRGIIHX--XXXXXXXXXXXXXXXXXXGAALCLKALVESDNWRFASDEMVNRVC 180
+TPE+KK +IH G+ALCLK+LV+ DNWR AS EMVN VC
Sbjct: 121 TTPEDKKTNVIHSLCKPLSDSLIDSQHQQHLALGSALCLKSLVDCDNWRSASSEMVNNVC 180
Query: 181 QNVAVALEGKCKSQTNAHMGLVMALAKRNALIVEAYARLFIQSGLRVLNAGLAEGNSQKR 240
Q++AVALE S+ +HM LVMAL+K N VEAYARLF++SGLR+L+ G+ EG+SQKR
Sbjct: 181 QSLAVALEA-TSSEAKSHMALVMALSKHNPFTVEAYARLFVKSGLRILDLGVVEGDSQKR 239
Query: 241 LSAIQMVNFLMKCLDPRXXXXXXXXXXXXXXRCQSDKMAFVKGAAFEALQIAKEIAIGKP 300
L AIQM+NFLMK L+P+ + Q D+ +VK AA E ++ A+ +
Sbjct: 240 LLAIQMLNFLMKNLNPKSISSELELIYQEMEKYQKDQ-HYVKMAAHETMRQAERLICEAD 298
Query: 301 KHVKSPASVTGSNLSREVNTSSGDEDHSPASVSPESRA 338
+ ++LS V ++S +H + S + R+
Sbjct: 299 PMFDAENCKPRNSLSGSVKSTSSLREHDGSVYSRQDRS 336
>AT3G03970.3 | Symbols: | ARM repeat superfamily protein |
chr3:1028144-1029891 REVERSE LENGTH=554
Length = 554
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/338 (47%), Positives = 212/338 (62%), Gaps = 9/338 (2%)
Query: 8 MGRNLSPVVRQELANLDKDADSRKSAMKALKSYVKDMDFKAVPVFLAKISETKEIP---- 63
MGRNL RQELANLDKD DS K+AM L+S VKD+D K V VF+A++S+ KEI
Sbjct: 1 MGRNLGSAFRQELANLDKDPDSHKTAMSNLRSIVKDLDAKVVHVFVAQLSDVKEIGLESG 60
Query: 64 -FTISLYEVFARVHGVKIVPLIDTIMGSIVQTLGSSGGSFSLHQACSKVVPAIAKYGIDH 122
+T+SL+E AR HGVKI P ID IM +I++TL SS GS + QACS+ V A+A+YGID
Sbjct: 61 GYTVSLFEDLARAHGVKIAPHIDIIMPAIIRTLSSSEGSLRVQQACSRAVAAMARYGIDP 120
Query: 123 STPEEKKRGIIHX--XXXXXXXXXXXXXXXXXXGAALCLKALVESDNWRFASDEMVNRVC 180
+TPE+KK +IH G+ALCLK+LV+ DNWR AS EMVN VC
Sbjct: 121 TTPEDKKTNVIHSLCKPLSDSLIDSQHQQHLALGSALCLKSLVDCDNWRSASSEMVNNVC 180
Query: 181 QNVAVALEGKCKSQTNAHMGLVMALAKRNALIVEAYARLFIQSGLRVLNAGLAEGNSQKR 240
Q++AVALE S+ +HM LVMAL+K N VEAYARLF++SGLR+L+ G+ EG+SQKR
Sbjct: 181 QSLAVALEA-TSSEAKSHMALVMALSKHNPFTVEAYARLFVKSGLRILDLGVVEGDSQKR 239
Query: 241 LSAIQMVNFLMKCLDPRXXXXXXXXXXXXXXRCQSDKMAFVKGAAFEALQIAKEIAIGKP 300
L AIQM+NFLMK L+P+ + Q D+ +VK AA E ++ A+ +
Sbjct: 240 LLAIQMLNFLMKNLNPKSISSELELIYQEMEKYQKDQ-HYVKMAAHETMRQAERLICEAD 298
Query: 301 KHVKSPASVTGSNLSREVNTSSGDEDHSPASVSPESRA 338
+ ++LS V ++S +H + S + R+
Sbjct: 299 PMFDAENCKPRNSLSGSVKSTSSLREHDGSVYSRQDRS 336
>AT3G03970.1 | Symbols: | ARM repeat superfamily protein |
chr3:1028144-1029891 REVERSE LENGTH=554
Length = 554
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/338 (47%), Positives = 212/338 (62%), Gaps = 9/338 (2%)
Query: 8 MGRNLSPVVRQELANLDKDADSRKSAMKALKSYVKDMDFKAVPVFLAKISETKEIP---- 63
MGRNL RQELANLDKD DS K+AM L+S VKD+D K V VF+A++S+ KEI
Sbjct: 1 MGRNLGSAFRQELANLDKDPDSHKTAMSNLRSIVKDLDAKVVHVFVAQLSDVKEIGLESG 60
Query: 64 -FTISLYEVFARVHGVKIVPLIDTIMGSIVQTLGSSGGSFSLHQACSKVVPAIAKYGIDH 122
+T+SL+E AR HGVKI P ID IM +I++TL SS GS + QACS+ V A+A+YGID
Sbjct: 61 GYTVSLFEDLARAHGVKIAPHIDIIMPAIIRTLSSSEGSLRVQQACSRAVAAMARYGIDP 120
Query: 123 STPEEKKRGIIHX--XXXXXXXXXXXXXXXXXXGAALCLKALVESDNWRFASDEMVNRVC 180
+TPE+KK +IH G+ALCLK+LV+ DNWR AS EMVN VC
Sbjct: 121 TTPEDKKTNVIHSLCKPLSDSLIDSQHQQHLALGSALCLKSLVDCDNWRSASSEMVNNVC 180
Query: 181 QNVAVALEGKCKSQTNAHMGLVMALAKRNALIVEAYARLFIQSGLRVLNAGLAEGNSQKR 240
Q++AVALE S+ +HM LVMAL+K N VEAYARLF++SGLR+L+ G+ EG+SQKR
Sbjct: 181 QSLAVALEA-TSSEAKSHMALVMALSKHNPFTVEAYARLFVKSGLRILDLGVVEGDSQKR 239
Query: 241 LSAIQMVNFLMKCLDPRXXXXXXXXXXXXXXRCQSDKMAFVKGAAFEALQIAKEIAIGKP 300
L AIQM+NFLMK L+P+ + Q D+ +VK AA E ++ A+ +
Sbjct: 240 LLAIQMLNFLMKNLNPKSISSELELIYQEMEKYQKDQ-HYVKMAAHETMRQAERLICEAD 298
Query: 301 KHVKSPASVTGSNLSREVNTSSGDEDHSPASVSPESRA 338
+ ++LS V ++S +H + S + R+
Sbjct: 299 PMFDAENCKPRNSLSGSVKSTSSLREHDGSVYSRQDRS 336