Miyakogusa Predicted Gene

Lj1g3v3974980.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3974980.1 Non Chatacterized Hit- tr|I3ST78|I3ST78_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.89,0,coiled-coil,NULL; seg,NULL; no description,Zinc finger,
RING/FYVE/PHD-type; PHD ZN FINGER-CONTAINING,CUFF.31623.1
         (270 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G54390.3 | Symbols: ING2 | PHD finger protein-related | chr1:...   398   e-111
AT1G54390.4 | Symbols: ING2 | PHD finger protein-related | chr1:...   398   e-111
AT1G54390.2 | Symbols: ING2 | PHD finger protein-related | chr1:...   323   7e-89
AT1G54390.1 | Symbols: ING2 | PHD finger protein-related | chr1:...   323   9e-89
AT1G54390.5 | Symbols: ING2 | PHD finger protein-related | chr1:...   322   1e-88
AT1G54390.6 | Symbols: ING2 | PHD finger protein-related | chr1:...   287   7e-78
AT3G24010.1 | Symbols: ING1, ATING1 | RING/FYVE/PHD zinc finger ...   107   8e-24

>AT1G54390.3 | Symbols: ING2 | PHD finger protein-related |
           chr1:20305061-20306943 REVERSE LENGTH=262
          Length = 262

 Score =  398 bits (1022), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 200/268 (74%), Positives = 221/268 (82%), Gaps = 8/268 (2%)

Query: 1   MAIARTGVYVDDYLEYANTLPAELQRLLNTVRELDERSQSMINQTRQQTKYCMGFSSHGS 60
           MAIARTGVYVDDYLEYA+T PAELQRLLNTVRELDERSQS+INQTRQQTKYC+G +S  S
Sbjct: 1   MAIARTGVYVDDYLEYASTFPAELQRLLNTVRELDERSQSLINQTRQQTKYCLGLASQSS 60

Query: 61  RKGXXXXXXXXXXXXEDDDAAIEKMRKDIETYQDNALSLCTEKVLLARQAYELIDSHVKR 120
           +KG             D++  IEKMRK+IE+ Q+NALSLCTEKVLLARQAY+LIDSHVKR
Sbjct: 61  KKGNGNHYNNGGL---DEEETIEKMRKEIESSQENALSLCTEKVLLARQAYDLIDSHVKR 117

Query: 121 LDEDLNNFAEDLKQEGKIAQDEPAILPPLPIVPKPEKRRQVVYGTPQSKXXXXXXXXXXX 180
           LDEDLNNFAEDLKQEGKI  DEP++LPPLPIVPK EKR+   YGTPQ K           
Sbjct: 118 LDEDLNNFAEDLKQEGKIPPDEPSVLPPLPIVPKAEKRKSF-YGTPQPKKIDYRDRDWDR 176

Query: 181 XXXXXFELMPPPGSHKKDYVIPMDVDQPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEW 240
                FELMPPPGS++KD ++P++ +QPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEW
Sbjct: 177 DRD--FELMPPPGSNRKD-LMPIE-EQPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEW 232

Query: 241 FHYACVGLTQETRFKGKWYCPTCRLLPQ 268
           FHY CVGLT ETRFKGKWYCPTCRLLPQ
Sbjct: 233 FHYTCVGLTPETRFKGKWYCPTCRLLPQ 260


>AT1G54390.4 | Symbols: ING2 | PHD finger protein-related |
           chr1:20305061-20306943 REVERSE LENGTH=262
          Length = 262

 Score =  398 bits (1022), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 200/268 (74%), Positives = 221/268 (82%), Gaps = 8/268 (2%)

Query: 1   MAIARTGVYVDDYLEYANTLPAELQRLLNTVRELDERSQSMINQTRQQTKYCMGFSSHGS 60
           MAIARTGVYVDDYLEYA+T PAELQRLLNTVRELDERSQS+INQTRQQTKYC+G +S  S
Sbjct: 1   MAIARTGVYVDDYLEYASTFPAELQRLLNTVRELDERSQSLINQTRQQTKYCLGLASQSS 60

Query: 61  RKGXXXXXXXXXXXXEDDDAAIEKMRKDIETYQDNALSLCTEKVLLARQAYELIDSHVKR 120
           +KG             D++  IEKMRK+IE+ Q+NALSLCTEKVLLARQAY+LIDSHVKR
Sbjct: 61  KKGNGNHYNNGGL---DEEETIEKMRKEIESSQENALSLCTEKVLLARQAYDLIDSHVKR 117

Query: 121 LDEDLNNFAEDLKQEGKIAQDEPAILPPLPIVPKPEKRRQVVYGTPQSKXXXXXXXXXXX 180
           LDEDLNNFAEDLKQEGKI  DEP++LPPLPIVPK EKR+   YGTPQ K           
Sbjct: 118 LDEDLNNFAEDLKQEGKIPPDEPSVLPPLPIVPKAEKRKSF-YGTPQPKKIDYRDRDWDR 176

Query: 181 XXXXXFELMPPPGSHKKDYVIPMDVDQPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEW 240
                FELMPPPGS++KD ++P++ +QPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEW
Sbjct: 177 DRD--FELMPPPGSNRKD-LMPIE-EQPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEW 232

Query: 241 FHYACVGLTQETRFKGKWYCPTCRLLPQ 268
           FHY CVGLT ETRFKGKWYCPTCRLLPQ
Sbjct: 233 FHYTCVGLTPETRFKGKWYCPTCRLLPQ 260


>AT1G54390.2 | Symbols: ING2 | PHD finger protein-related |
           chr1:20304833-20306943 REVERSE LENGTH=328
          Length = 328

 Score =  323 bits (828), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 168/234 (71%), Positives = 189/234 (80%), Gaps = 8/234 (3%)

Query: 1   MAIARTGVYVDDYLEYANTLPAELQRLLNTVRELDERSQSMINQTRQQTKYCMGFSSHGS 60
           MAIARTGVYVDDYLEYA+T PAELQRLLNTVRELDERSQS+INQTRQQTKYC+G +S  S
Sbjct: 1   MAIARTGVYVDDYLEYASTFPAELQRLLNTVRELDERSQSLINQTRQQTKYCLGLASQSS 60

Query: 61  RKGXXXXXXXXXXXXEDDDAAIEKMRKDIETYQDNALSLCTEKVLLARQAYELIDSHVKR 120
           +KG             D++  IEKMRK+IE+ Q+NALSLCTEKVLLARQAY+LIDSHVKR
Sbjct: 61  KKGNGNHYNNGGL---DEEETIEKMRKEIESSQENALSLCTEKVLLARQAYDLIDSHVKR 117

Query: 121 LDEDLNNFAEDLKQEGKIAQDEPAILPPLPIVPKPEKRRQVVYGTPQSKXXXXXXXXXXX 180
           LDEDLNNFAEDLKQEGKI  DEP++LPPLPIVPK EKR+   YGTPQ K           
Sbjct: 118 LDEDLNNFAEDLKQEGKIPPDEPSVLPPLPIVPKAEKRKS-FYGTPQPK--KIDYRDRDW 174

Query: 181 XXXXXFELMPPPGSHKKDYVIPMDVDQPIDPNEPTYCVCHQVSFGDMIACDNEN 234
                FELMPPPGS++KD ++P++ +QPIDPNEPTYCVCHQVSFGDMIACDNEN
Sbjct: 175 DRDRDFELMPPPGSNRKD-LMPIE-EQPIDPNEPTYCVCHQVSFGDMIACDNEN 226


>AT1G54390.1 | Symbols: ING2 | PHD finger protein-related |
           chr1:20305012-20306943 REVERSE LENGTH=306
          Length = 306

 Score =  323 bits (827), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 168/234 (71%), Positives = 189/234 (80%), Gaps = 8/234 (3%)

Query: 1   MAIARTGVYVDDYLEYANTLPAELQRLLNTVRELDERSQSMINQTRQQTKYCMGFSSHGS 60
           MAIARTGVYVDDYLEYA+T PAELQRLLNTVRELDERSQS+INQTRQQTKYC+G +S  S
Sbjct: 1   MAIARTGVYVDDYLEYASTFPAELQRLLNTVRELDERSQSLINQTRQQTKYCLGLASQSS 60

Query: 61  RKGXXXXXXXXXXXXEDDDAAIEKMRKDIETYQDNALSLCTEKVLLARQAYELIDSHVKR 120
           +KG             D++  IEKMRK+IE+ Q+NALSLCTEKVLLARQAY+LIDSHVKR
Sbjct: 61  KKGNGNHYNNGGL---DEEETIEKMRKEIESSQENALSLCTEKVLLARQAYDLIDSHVKR 117

Query: 121 LDEDLNNFAEDLKQEGKIAQDEPAILPPLPIVPKPEKRRQVVYGTPQSKXXXXXXXXXXX 180
           LDEDLNNFAEDLKQEGKI  DEP++LPPLPIVPK EKR+   YGTPQ K           
Sbjct: 118 LDEDLNNFAEDLKQEGKIPPDEPSVLPPLPIVPKAEKRKS-FYGTPQPK--KIDYRDRDW 174

Query: 181 XXXXXFELMPPPGSHKKDYVIPMDVDQPIDPNEPTYCVCHQVSFGDMIACDNEN 234
                FELMPPPGS++KD ++P++ +QPIDPNEPTYCVCHQVSFGDMIACDNEN
Sbjct: 175 DRDRDFELMPPPGSNRKD-LMPIE-EQPIDPNEPTYCVCHQVSFGDMIACDNEN 226


>AT1G54390.5 | Symbols: ING2 | PHD finger protein-related |
           chr1:20305061-20306693 REVERSE LENGTH=242
          Length = 242

 Score =  322 bits (826), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 162/230 (70%), Positives = 184/230 (80%), Gaps = 8/230 (3%)

Query: 39  QSMINQTRQQTKYCMGFSSHGSRKGXXXXXXXXXXXXEDDDAAIEKMRKDIETYQDNALS 98
           +++INQTRQQTKYC+G +S  S+KG             D++  IEKMRK+IE+ Q+NALS
Sbjct: 19  EALINQTRQQTKYCLGLASQSSKKGNGNHYNNGGL---DEEETIEKMRKEIESSQENALS 75

Query: 99  LCTEKVLLARQAYELIDSHVKRLDEDLNNFAEDLKQEGKIAQDEPAILPPLPIVPKPEKR 158
           LCTEKVLLARQAY+LIDSHVKRLDEDLNNFAEDLKQEGKI  DEP++LPPLPIVPK EKR
Sbjct: 76  LCTEKVLLARQAYDLIDSHVKRLDEDLNNFAEDLKQEGKIPPDEPSVLPPLPIVPKAEKR 135

Query: 159 RQVVYGTPQSKXXXXXXXXXXXXXXXXFELMPPPGSHKKDYVIPMDVDQPIDPNEPTYCV 218
           +   YGTPQ K                FELMPPPGS++KD ++P++ +QPIDPNEPTYCV
Sbjct: 136 KSF-YGTPQPKKIDYRDRDWDRDRD--FELMPPPGSNRKD-LMPIE-EQPIDPNEPTYCV 190

Query: 219 CHQVSFGDMIACDNENCQGGEWFHYACVGLTQETRFKGKWYCPTCRLLPQ 268
           CHQVSFGDMIACDNENCQGGEWFHY CVGLT ETRFKGKWYCPTCRLLPQ
Sbjct: 191 CHQVSFGDMIACDNENCQGGEWFHYTCVGLTPETRFKGKWYCPTCRLLPQ 240


>AT1G54390.6 | Symbols: ING2 | PHD finger protein-related |
           chr1:20305061-20306510 REVERSE LENGTH=181
          Length = 181

 Score =  287 bits (734), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 142/184 (77%), Positives = 156/184 (84%), Gaps = 5/184 (2%)

Query: 85  MRKDIETYQDNALSLCTEKVLLARQAYELIDSHVKRLDEDLNNFAEDLKQEGKIAQDEPA 144
           MRK+IE+ Q+NALSLCTEKVLLARQAY+LIDSHVKRLDEDLNNFAEDLKQEGKI  DEP+
Sbjct: 1   MRKEIESSQENALSLCTEKVLLARQAYDLIDSHVKRLDEDLNNFAEDLKQEGKIPPDEPS 60

Query: 145 ILPPLPIVPKPEKRRQVVYGTPQSKXXXXXXXXXXXXXXXXFELMPPPGSHKKDYVIPMD 204
           +LPPLPIVPK EKR+   YGTPQ K                FELMPPPGS++KD ++P++
Sbjct: 61  VLPPLPIVPKAEKRKSF-YGTPQPKKIDYRDRDWDRDRD--FELMPPPGSNRKD-LMPIE 116

Query: 205 VDQPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEWFHYACVGLTQETRFKGKWYCPTCR 264
            +QPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEWFHY CVGLT ETRFKGKWYCPTCR
Sbjct: 117 -EQPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEWFHYTCVGLTPETRFKGKWYCPTCR 175

Query: 265 LLPQ 268
           LLPQ
Sbjct: 176 LLPQ 179


>AT3G24010.1 | Symbols: ING1, ATING1 | RING/FYVE/PHD zinc finger
           superfamily protein | chr3:8676120-8678186 REVERSE
           LENGTH=234
          Length = 234

 Score =  107 bits (267), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 93/185 (50%), Gaps = 21/185 (11%)

Query: 79  DAAIEKMRKDIETYQDNALSLCTEKVLLARQAYELIDSHVKRLDEDLNNFAEDLKQEGKI 138
           + ++ K  ++    Q +++ +  EKV LA QAY+L+D HV++LD+ +    E +++E   
Sbjct: 61  NTSLTKFSEEALDEQKHSVRIADEKVTLAMQAYDLVDMHVQQLDQYMKKSDEVIRKE--- 117

Query: 139 AQDEPAILPPLPIVPKPEKRRQVVYGTPQSKXXXXXXXXXXXXXXXXFELMPPPGSHKKD 198
              + A    L +    +       G    K                             
Sbjct: 118 ---KEAAAATLELENNGKAGNAGEGGRGGRKKTRLATAASTAAASTGM------------ 162

Query: 199 YVIPMDVDQPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEWFHYACVGLTQETRFKGKW 258
               MD+D P+DPNEPTYC+C+QVSFG+M+ACDN  C+  EWFH+ CVGL ++   KGKW
Sbjct: 163 TSSNMDLDLPVDPNEPTYCICNQVSFGEMVACDNNACK-IEWFHFGCVGLKEQP--KGKW 219

Query: 259 YCPTC 263
           YCP C
Sbjct: 220 YCPEC 224