Miyakogusa Predicted Gene
- Lj1g3v3943730.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3943730.1 tr|G7L219|G7L219_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_7g0,25.15,2e-18,PPR,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide repeat; PPR_1,Pentatricopeptide repeat; PPR:
p,CUFF.31529.1
(478 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 452 e-127
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 323 1e-88
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 302 3e-82
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 8e-79
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 6e-75
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 3e-73
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 271 7e-73
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 270 1e-72
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 4e-71
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 265 5e-71
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 264 1e-70
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 260 1e-69
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 1e-69
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 259 3e-69
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 1e-68
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 256 2e-68
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 255 4e-68
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 254 1e-67
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 254 1e-67
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 250 1e-66
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 2e-65
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 2e-65
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 2e-63
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 7e-63
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 6e-62
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 7e-62
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 8e-62
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 234 9e-62
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 1e-61
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 1e-60
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 5e-60
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 6e-60
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 228 7e-60
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 7e-60
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 8e-60
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 2e-59
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 4e-59
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 3e-58
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 222 5e-58
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 222 5e-58
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 6e-58
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 6e-58
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 220 2e-57
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 2e-57
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 2e-57
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 3e-57
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 4e-56
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 6e-56
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 3e-55
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 213 3e-55
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 5e-55
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 4e-54
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 208 8e-54
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 206 2e-53
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 2e-53
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 206 2e-53
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 3e-53
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 3e-53
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 3e-53
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 5e-53
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 204 9e-53
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 204 1e-52
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 2e-52
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 7e-52
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 7e-52
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 7e-52
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 200 2e-51
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 4e-51
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 199 4e-51
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 7e-51
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 8e-51
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 1e-50
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 197 2e-50
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 9e-50
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 2e-49
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 2e-49
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 2e-49
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 3e-49
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 192 3e-49
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 4e-49
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 4e-49
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 6e-49
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 7e-49
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 7e-49
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 8e-49
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 1e-48
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 190 2e-48
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 3e-48
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 3e-48
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 4e-48
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 189 4e-48
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 4e-48
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 189 4e-48
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 5e-48
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 189 5e-48
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 7e-48
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 187 1e-47
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 7e-47
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 185 7e-47
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 7e-47
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 184 1e-46
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 182 4e-46
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 6e-46
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 3e-45
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 4e-45
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 8e-45
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 177 1e-44
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 2e-44
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 176 3e-44
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 3e-44
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 176 4e-44
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 6e-44
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 174 1e-43
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 2e-43
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 4e-43
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 4e-43
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 6e-43
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 172 6e-43
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 9e-43
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 170 2e-42
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 169 4e-42
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 5e-42
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 6e-42
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 167 1e-41
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 2e-41
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 2e-41
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 2e-41
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 3e-40
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 3e-40
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 4e-40
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 4e-40
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 8e-40
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 1e-39
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 5e-38
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 3e-37
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 2e-35
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 7e-34
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 140 3e-33
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 136 3e-32
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 9e-25
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 104 1e-22
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 103 2e-22
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 4e-22
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 7e-22
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 8e-22
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 4e-21
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 6e-21
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 6e-21
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 2e-20
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 97 3e-20
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 97 3e-20
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 97 4e-20
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 4e-20
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 92 8e-19
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 3e-18
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 3e-18
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 5e-18
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 5e-18
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 5e-18
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 2e-17
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 87 3e-17
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 85 1e-16
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 84 2e-16
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 84 2e-16
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 82 1e-15
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 80 2e-15
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 77 2e-14
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 75 8e-14
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 74 2e-13
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 5e-13
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 72 1e-12
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 71 2e-12
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 70 4e-12
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 69 7e-12
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 4e-11
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 65 2e-10
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 62 8e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 61 1e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 60 4e-09
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 59 6e-09
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 7e-09
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 58 2e-08
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 55 1e-07
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 53 6e-07
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 50 3e-06
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 50 3e-06
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 452 bits (1164), Expect = e-127, Method: Compositional matrix adjust.
Identities = 217/398 (54%), Positives = 293/398 (73%), Gaps = 2/398 (0%)
Query: 22 FDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQ 81
F S +A L C NF QLKQ+H +II+ LT+DQ+L+R+L+ S ++G+ YASLVF+Q
Sbjct: 18 FRSPEASYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQ 77
Query: 82 INAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAP-DKFTYPFVIKACIASNAFDF 140
+ +P +FTWN+MIR +++ P AL+LF M++ + DKFT+PFVIKAC+AS++
Sbjct: 78 LQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRL 137
Query: 141 GRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIA 200
G VH LAIK F+ D + QNT+M+ YFKCG + G KVFDKM G S+VSWTT++ GL++
Sbjct: 138 GTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVS 197
Query: 201 CGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSL 260
++D A VF++MP +NVVSWTAMI YVK +RP EAF LF MQ+++V+PNEFT+V+L
Sbjct: 198 NSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNL 257
Query: 261 VSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNL 320
+ A T++GSL +G+W+HDYA KNG L FLGTALIDMYSKCGSL DA VF +M ++L
Sbjct: 258 LQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSL 317
Query: 321 ATWNTMITSLGVHGLSEEALDLF-KEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFS 379
ATWN+MITSLGVHG EEAL LF + E+A+V PDA+TFVGVLSAC + +V++G RYF+
Sbjct: 318 ATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFT 377
Query: 380 LMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAM 417
M + YGISPI EH CM++L E+++ E+M
Sbjct: 378 RMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESM 415
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 323 bits (829), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 166/434 (38%), Positives = 253/434 (58%), Gaps = 9/434 (2%)
Query: 33 NCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAY-GKMNYASLVFDQINAPDSFTWN 91
C ++LKQ+H +I++GL D V ++L CA MNYA LVF +IN + F WN
Sbjct: 34 QCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWN 93
Query: 92 VMIRGCTLSGSPEHALVLFKEMLLKG--FAPDKFTYPFVIKACIASNAFDFGRAVHALAI 149
+IRG + S PE A+ +F +ML P + TYP V KA GR +H + I
Sbjct: 94 TIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVI 153
Query: 150 KMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRARE 209
K D++++NTM++ Y CG + ++F M G VV+W ++I G CG +D+A+
Sbjct: 154 KEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQN 213
Query: 210 VFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGS 269
+FDEMP +N VSW +MI G+V+ R +A D+F MQ ++V+P+ FT+VSL++AC +G+
Sbjct: 214 LFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGA 273
Query: 270 LKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITS 329
+ G+WIH+Y ++N EL + TALIDMY KCG +++ VF ++ L+ WN+MI
Sbjct: 274 SEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILG 333
Query: 330 LGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISP 389
L +G E A+DLF E+E++ + PD+V+F+GVL+AC H +V + +F LM E Y I P
Sbjct: 334 LANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEP 393
Query: 390 ILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNVVELLQESKLTSVDDIKEVINKH 449
++HY MV + G L+E EA+ +M ++ V + S L++ I V
Sbjct: 394 SIKHYTLMVNVLGGAGLLEEA----EALIKNMPVEEDTV--IWSSLLSACRKIGNVEMAK 447
Query: 450 YGDLNFSKLDLDHS 463
KLD D +
Sbjct: 448 RAAKCLKKLDPDET 461
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 302 bits (774), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 172/487 (35%), Positives = 265/487 (54%), Gaps = 55/487 (11%)
Query: 32 ENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGK---MNYASLVFDQINAPDSF 88
E + +++Q H ++++GL HD KL+ + + ++YA + ++I +P+ F
Sbjct: 47 ERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGF 106
Query: 89 TWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALA 148
T N +IR S +PE AL +F+EMLL PDK+++ FV+KAC A F+ GR +H L
Sbjct: 107 THNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLF 166
Query: 149 IKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAR 208
IK D +V+NT++N Y + G E KV D+M VSW +L++ + G VD AR
Sbjct: 167 IKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEAR 226
Query: 209 EVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENV------------------ 250
+FDEM +NV SW MI GY EA ++F+ M + +V
Sbjct: 227 ALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNE 286
Query: 251 --------------RPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALI 296
+P+ FTLVS++SAC +GSL G+W+H Y K+GIE+ FL TAL+
Sbjct: 287 VLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALV 346
Query: 297 DMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAV 356
DMYSKCG +D A VF ++R+++TWN++I+ L VHGL ++AL++F EM P+ +
Sbjct: 347 DMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGI 406
Query: 357 TFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEA 416
TF+GVLSAC H+ +++ + F +M+ Y + P +EHY CMV+L L + EEA
Sbjct: 407 TFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDL------LGRMGKIEEA 460
Query: 417 MSLSMKTNQNVVELLQESKLTSVDDIKEVINKHYGDLNFSK------LDLDHSSVSSVPE 470
L + + +L ES L + K +G L ++ L+L+ S +
Sbjct: 461 EELVNEIPADEASILLESLLGAC--------KRFGQLEQAERIANRLLELNLRDSSGYAQ 512
Query: 471 TQELHAS 477
L+AS
Sbjct: 513 MSNLYAS 519
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
Query: 19 TTRFDSQQALVTLENCCNFKQLKQ---VHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYA 75
T + D + L C + L Q VH I + G+ + L L+ GK++ A
Sbjct: 299 TEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKA 358
Query: 76 SLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIAS 135
VF + D TWN +I ++ G + AL +F EM+ +GF P+ T+ V+ AC
Sbjct: 359 LEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHV 418
Query: 136 NAFDFGR 142
D R
Sbjct: 419 GMLDQAR 425
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 291 bits (744), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 145/397 (36%), Positives = 226/397 (56%), Gaps = 3/397 (0%)
Query: 26 QALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQ---HSCAYGKMNYASLVFDQI 82
+ + L+ C ++LKQ+H R++++GL D + K L S + + YA +VFD
Sbjct: 16 ETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGF 75
Query: 83 NAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGR 142
+ PD+F WN+MIRG + S PE +L+L++ ML + +T+P ++KAC +AF+
Sbjct: 76 DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETT 135
Query: 143 AVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACG 202
+HA K+ + D Y N+++N Y GN + +FD++ VSW ++I G + G
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 195
Query: 203 KVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVS 262
K+D A +F +M KN +SWT MI GYV+ EA LF MQ +V P+ +L + +S
Sbjct: 196 KMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALS 255
Query: 263 ACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLAT 322
AC ++G+L+ GKWIH Y K I + LG LIDMY+KCG +++A VF + ++++
Sbjct: 256 ACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQA 315
Query: 323 WNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMT 382
W +I+ HG EA+ F EM+K + P+ +TF VL+AC + VEEG+ F M
Sbjct: 316 WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 375
Query: 383 EHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
Y + P +EHY C+V+L LDE + M L
Sbjct: 376 RDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPL 412
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 142/352 (40%), Gaps = 66/352 (18%)
Query: 16 NTPTTRFDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYA 75
+ P + L N F++ Q+H +I + G +D + L+ G A
Sbjct: 110 SAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLA 169
Query: 76 SLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEM----------LLKGFA------ 119
L+FD+I PD +WN +I+G +G + AL LF++M ++ G+
Sbjct: 170 HLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNK 229
Query: 120 ---------------PDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMM 164
PD + + AC A + G+ +H+ K R D+ + ++
Sbjct: 230 EALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLI 289
Query: 165 NFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTA 224
+ Y KCG E+ +VF ++ SV +WT A
Sbjct: 290 DMYAKCGEMEEALEVFKNIKKKSVQAWT-------------------------------A 318
Query: 225 MIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNG 284
+I GY EA F MQ ++PN T ++++AC+ G ++ GK I Y+++
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF-YSMERD 377
Query: 285 IELGPFLG--TALIDMYSKCGSLDDAWIVFGIMTER-NLATWNTMITSLGVH 333
L P + ++D+ + G LD+A M + N W ++ + +H
Sbjct: 378 YNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIH 429
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 278 bits (711), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 240/426 (56%), Gaps = 39/426 (9%)
Query: 32 ENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSC--AYGKMNYASLVFDQINAPDSFT 89
+NC N + LKQ+H ++ +GL + ++ +L+ + G + YA +FD+I PD
Sbjct: 20 QNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSI 79
Query: 90 WNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAI 149
N ++RG S PE + L+ EM +G +PD++T+ FV+KAC G A H +
Sbjct: 80 CNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVV 139
Query: 150 KMRFWGDTYVQNTMMNFYFKCGNE-------------------------------EDGCK 178
+ F + YV+N ++ F+ CG+ ++ +
Sbjct: 140 RHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMR 199
Query: 179 VFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEA 238
+FD+M V+W +I G + C ++D ARE+FD K+VV+W AMI GYV C P EA
Sbjct: 200 LFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEA 259
Query: 239 FDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDY-----AIKNGIELGPFLGT 293
+F+ M+ P+ T++SL+SAC +G L+ GK +H Y ++ + I +G +
Sbjct: 260 LGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWN 319
Query: 294 ALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVP 353
ALIDMY+KCGS+D A VF + +R+L+TWNT+I L +H +E ++++F+EM++ V P
Sbjct: 320 ALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWP 378
Query: 354 DAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTS 413
+ VTF+GV+ AC H V+EG +YFSLM + Y I P ++HY CMV++ +L+E +
Sbjct: 379 NEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMF 438
Query: 414 EEAMSL 419
E+M +
Sbjct: 439 VESMKI 444
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 148/383 (38%), Gaps = 70/383 (18%)
Query: 55 DQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEML 114
DQV ++ +M+ A +FD+ D TWN MI G G P+ AL +FKEM
Sbjct: 208 DQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMR 267
Query: 115 LKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEE 174
G PD T ++ AC + G+ +H ++ + T +
Sbjct: 268 DAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPI---------- 317
Query: 175 DGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQR 234
W LI CG +DRA EVF + +++ +W +I G +
Sbjct: 318 ----------------WNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVG-LALHH 360
Query: 235 PVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTA 294
+ ++FE MQ V PNE T + ++ AC+ G + G+ +
Sbjct: 361 AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYF---------------SL 405
Query: 295 LIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPD 354
+ DMY+ E N+ + M+ LG G EEA F +E + P+
Sbjct: 406 MRDMYN---------------IEPNIKHYGCMVDMLGRAGQLEEA---FMFVESMKIEPN 447
Query: 355 AVTFVGVLSACVHMHDVEEG----ERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEV 410
A+ + +L AC +VE G E+ S+ + G YV + +Y + D V
Sbjct: 448 AIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESG------DYVLLSNIYASTGQWDGV 501
Query: 411 YTSEEAMSLSMKTNQNVVELLQE 433
+ + V L++E
Sbjct: 502 QKVRKMFDDTRVKKPTGVSLIEE 524
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 149/397 (37%), Positives = 219/397 (55%), Gaps = 7/397 (1%)
Query: 36 NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIR 95
N K LKQ H +I +GL D + + K ++ G + YA VF P+++ N MIR
Sbjct: 27 NLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIR 86
Query: 96 GCTLSGSPEH---ALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMR 152
+L P A+ +++++ PD FT+PFV+K + + FGR +H +
Sbjct: 87 ALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFG 146
Query: 153 FWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFD 212
F +V ++ YF CG D K+FD+M V W L+AG G++D AR + +
Sbjct: 147 FDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLE 206
Query: 213 EMPS--KNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSL 270
MP +N VSWT +I GY K R EA ++F+ M +ENV P+E TL++++SAC ++GSL
Sbjct: 207 MMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSL 266
Query: 271 KLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSL 330
+LG+ I Y G+ L A+IDMY+K G++ A VF + ERN+ TW T+I L
Sbjct: 267 ELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGL 326
Query: 331 GVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPI 390
HG EAL +F M KA V P+ VTF+ +LSAC H+ V+ G+R F+ M YGI P
Sbjct: 327 ATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPN 386
Query: 391 LEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNV 427
+EHY CM++L +L E E S+ K N +
Sbjct: 387 IEHYGCMIDLLGRAGKLRE--ADEVIKSMPFKANAAI 421
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 271 bits (693), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 148/401 (36%), Positives = 224/401 (55%), Gaps = 23/401 (5%)
Query: 31 LENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCA-----YGKMNYASLVFDQINAP 85
+ NC + L Q+H I+SG D + ++L+ CA + ++YA +F+Q+
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRF-CATSDLHHRDLDYAHKIFNQMPQR 88
Query: 86 DSFTWNVMIRGCTLSGSPEH--ALVLFKEMLLKGFA-PDKFTYPFVIKACIASNAFDFGR 142
+ F+WN +IRG + S + A+ LF EM+ F P++FT+P V+KAC + G+
Sbjct: 89 NCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGK 148
Query: 143 AVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDK--------------MRGCSV 188
+H LA+K F GD +V + ++ Y CG +D +F K R +
Sbjct: 149 QIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEI 208
Query: 189 VSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE 248
V W +I G + G AR +FD+M ++VVSW MI GY +A ++F M+
Sbjct: 209 VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKG 268
Query: 249 NVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDA 308
++RPN TLVS++ A + +GSL+LG+W+H YA +GI + LG+ALIDMYSKCG ++ A
Sbjct: 269 DIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKA 328
Query: 309 WIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHM 368
VF + N+ TW+ MI +HG + +A+D F +M +A V P V ++ +L+AC H
Sbjct: 329 IHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHG 388
Query: 369 HDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDE 409
VEEG RYFS M G+ P +EHY CMV+L LDE
Sbjct: 389 GLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDE 429
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/452 (20%), Positives = 166/452 (36%), Gaps = 123/452 (27%)
Query: 20 TRFDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQH--SCAY-------- 69
RF L ++ KQ+HG ++ G D+ ++ L++ C +
Sbjct: 127 NRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLF 186
Query: 70 -----------------------------------GKMNYASLVFDQINAPDSFTWNVMI 94
G A ++FD++ +WN MI
Sbjct: 187 YKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMI 246
Query: 95 RGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFW 154
G +L+G + A+ +F+EM P+ T V+ A + + G +H A
Sbjct: 247 SGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIR 306
Query: 155 GDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEM 214
D + + +++ Y KCG E VF+++ +V++W
Sbjct: 307 IDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITW----------------------- 343
Query: 215 PSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGK 274
+AMI+G+ + +A D F M+ VRP++ ++L++AC+ G ++ G+
Sbjct: 344 --------SAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGR 395
Query: 275 WIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHG 334
+S+ S+D E + + M+ LG G
Sbjct: 396 ----------------------RYFSQMVSVDG--------LEPRIEHYGCMVDLLGRSG 425
Query: 335 LSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEH- 393
L +EA + M + PD V + +L AC +VE G+R +++ + ++ H
Sbjct: 426 LLDEAEEFILNMP---IKPDDVIWKALLGACRMQGNVEMGKRVANILMD------MVPHD 476
Query: 394 ---YVCMVELYTGDSELDEVYTSEEAMSLSMK 422
YV + +Y EV M L MK
Sbjct: 477 SGAYVALSNMYASQGNWSEV----SEMRLRMK 504
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/390 (34%), Positives = 228/390 (58%), Gaps = 1/390 (0%)
Query: 31 LENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTW 90
L+ + + K+++ II GL+ ++ K++ M+YA+ +F+Q++ P+ F +
Sbjct: 17 LQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLY 76
Query: 91 NVMIRGCTLSGSPEHALVLFKEMLLKGFA-PDKFTYPFVIKACIASNAFDFGRAVHALAI 149
N +IR T + + ++K++L K F PD+FT+PF+ K+C + + G+ VH
Sbjct: 77 NSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLC 136
Query: 150 KMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRARE 209
K +N +++ Y K + D KVFD+M V+SW +L++G G++ +A+
Sbjct: 137 KFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKG 196
Query: 210 VFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGS 269
+F M K +VSWTAMI GY VEA D F MQ+ + P+E +L+S++ +C ++GS
Sbjct: 197 LFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGS 256
Query: 270 LKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITS 329
L+LGKWIH YA + G + ALI+MYSKCG + A +FG M +++ +W+TMI+
Sbjct: 257 LELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISG 316
Query: 330 LGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISP 389
HG + A++ F EM++A V P+ +TF+G+LSAC H+ +EG RYF +M + Y I P
Sbjct: 317 YAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEP 376
Query: 390 ILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
+EHY C++++ +L+ + M +
Sbjct: 377 KIEHYGCLIDVLARAGKLERAVEITKTMPM 406
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 142/398 (35%), Positives = 225/398 (56%), Gaps = 8/398 (2%)
Query: 19 TTRFDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQ---HSCAYGK---- 71
T RF + L L++C +F LK +HG ++R+ L D + +LL + K
Sbjct: 8 TLRFKHPK-LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNL 66
Query: 72 MNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKA 131
+ YA +F QI P+ F +N++IR + P A + +ML PD T+PF+IKA
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 126
Query: 132 CIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSW 191
G H+ ++ F D YV+N++++ Y CG ++F +M VVSW
Sbjct: 127 SSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSW 186
Query: 192 TTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVR 251
T+++AG CG V+ ARE+FDEMP +N+ +W+ MI+GY K +A DLFE M+ E V
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 252 PNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIV 311
NE +VS++S+C +G+L+ G+ ++Y +K+ + + LGTAL+DM+ +CG ++ A V
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306
Query: 312 FGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDV 371
F + E + +W+++I L VHG + +A+ F +M +P VTF VLSAC H V
Sbjct: 307 FEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLV 366
Query: 372 EEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDE 409
E+G + M + +GI P LEHY C+V++ +L E
Sbjct: 367 EKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAE 404
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 140/394 (35%), Positives = 223/394 (56%), Gaps = 5/394 (1%)
Query: 31 LENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYG-KMN-YASLVFDQINAPDSF 88
L++C N Q+KQ+HG ++R GL +L KL++ G M+ YA V + + + F
Sbjct: 56 LDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPF 115
Query: 89 TWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALA 148
W +IRG + G + A+ ++ M + P FT+ ++KAC + GR HA
Sbjct: 116 LWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQT 175
Query: 149 IKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAR 208
++R + YV NTM++ Y KC + + KVFD+M V+SWT LIA G ++ A
Sbjct: 176 FRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAA 235
Query: 209 EVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMG 268
E+F+ +P+K++V+WTAM+ G+ + +P EA + F+ M+ +R +E T+ +SAC ++G
Sbjct: 236 ELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLG 295
Query: 269 SLKLGKWIHDYAIKNGIELGP--FLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTM 326
+ K A K+G +G+ALIDMYSKCG++++A VF M +N+ T+++M
Sbjct: 296 ASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSM 355
Query: 327 ITSLGVHGLSEEALDLFKEM-EKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHY 385
I L HG ++EAL LF M + + P+ VTFVG L AC H V++G + F M + +
Sbjct: 356 ILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTF 415
Query: 386 GISPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
G+ P +HY CMV+L L E + MS+
Sbjct: 416 GVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSV 449
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 254 EFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWI--V 311
E + SL+S + +L K IH + ++ G++ ++ T LI +K G D + V
Sbjct: 46 ELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRV 105
Query: 312 FGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDV 371
+ RN W +I + G +EA+ ++ M K + P + TF +L AC M D+
Sbjct: 106 IEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDL 165
Query: 372 EEGERY 377
G ++
Sbjct: 166 NLGRQF 171
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 265 bits (677), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 217/385 (56%), Gaps = 1/385 (0%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+ +HG ++S + D + L+ + G ++ A VF I D +WN MI G
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 210
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
GSP+ AL LFK+M + T V+ AC +FGR V + + R + +
Sbjct: 211 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA 270
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N M++ Y KCG+ ED ++FD M V+WTT++ G + AREV + MP K++V
Sbjct: 271 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 330
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIE-NVRPNEFTLVSLVSACTEMGSLKLGKWIHDY 279
+W A+I Y + +P EA +F +Q++ N++ N+ TLVS +SAC ++G+L+LG+WIH Y
Sbjct: 331 AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSY 390
Query: 280 AIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEA 339
K+GI + + +ALI MYSKCG L+ + VF + +R++ W+ MI L +HG EA
Sbjct: 391 IKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEA 450
Query: 340 LDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVE 399
+D+F +M++ANV P+ VTF V AC H V+E E F M +YGI P +HY C+V+
Sbjct: 451 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVD 510
Query: 400 LYTGDSELDEVYTSEEAMSLSMKTN 424
+ L++ EAM + T+
Sbjct: 511 VLGRSGYLEKAVKFIEAMPIPPSTS 535
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 122/224 (54%), Gaps = 2/224 (0%)
Query: 195 IAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN-VRPN 253
+A L + ++ AR+VFDE+P N +W +I Y PV + F M E+ PN
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 254 EFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFG 313
++T L+ A E+ SL LG+ +H A+K+ + F+ +LI Y CG LD A VF
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFT 190
Query: 314 IMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEE 373
+ E+++ +WN+MI G ++AL+LFK+ME +V VT VGVLSAC + ++E
Sbjct: 191 TIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEF 250
Query: 374 GERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAM 417
G + S + E+ ++ L M+++YT +++ +AM
Sbjct: 251 GRQVCSYIEENR-VNVNLTLANAMLDMYTKCGSIEDAKRLFDAM 293
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 157/428 (36%), Positives = 229/428 (53%), Gaps = 48/428 (11%)
Query: 8 PDANVPHFNTPTTRFDSQQALVTL-ENCCNFKQLKQVHGRIIRSGLTHDQV---LLRKLL 63
P A+ P + +T + Q + +L E C + QLKQ+H +R+ + L K+L
Sbjct: 34 PPASSP---SASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKIL 90
Query: 64 QHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGS-PEHALVLFKEMLLKG-FAPD 121
Q S ++ +NYA VFD I SF WN +IR C S E A +L+++ML +G +PD
Sbjct: 91 QLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPD 150
Query: 122 KFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFD 181
K T+PFV+KAC F G+ VH +K F GD YV N +++ Y
Sbjct: 151 KHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYG------------- 197
Query: 182 KMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDL 241
+CG +D AR+VFDEMP +++VSW +MID V+ A L
Sbjct: 198 ------------------SCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQL 239
Query: 242 FEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKN---GIELGPFLGTALIDM 298
F MQ + P+ +T+ S++SAC +GSL LG W H + ++ + + + +LI+M
Sbjct: 240 FREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEM 298
Query: 299 YSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEM--EKANVVPDAV 356
Y KCGSL A VF M +R+LA+WN MI HG +EEA++ F M ++ NV P++V
Sbjct: 299 YCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSV 358
Query: 357 TFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEA 416
TFVG+L AC H V +G +YF +M Y I P LEHY C+V+L + E +
Sbjct: 359 TFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAI--DMV 416
Query: 417 MSLSMKTN 424
MS+ MK +
Sbjct: 417 MSMPMKPD 424
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 137/375 (36%), Positives = 204/375 (54%), Gaps = 32/375 (8%)
Query: 38 KQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGC 97
KQL+QVH +I +G + LL KL+ +C+ + Y L+F + PD F +N +I+
Sbjct: 23 KQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKST 82
Query: 98 TLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDT 157
+ P H + ++ ML +P +T+ VIK+C +A G+ VH A+ F DT
Sbjct: 83 SKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDT 142
Query: 158 YVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK 217
YVQ ++ FY KCG+ E AR+VFD MP K
Sbjct: 143 YVQAALVTFYSKCGDMEG-------------------------------ARQVFDRMPEK 171
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
++V+W +++ G+ + EA +F M+ P+ T VSL+SAC + G++ LG W+H
Sbjct: 172 SIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVH 231
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSE 337
Y I G++L LGTALI++YS+CG + A VF M E N+A W MI++ G HG +
Sbjct: 232 QYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQ 291
Query: 338 EALDLFKEME-KANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVC 396
+A++LF +ME +P+ VTFV VLSAC H VEEG + MT+ Y + P +EH+VC
Sbjct: 292 QAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVC 351
Query: 397 MVELYTGDSELDEVY 411
MV++ LDE Y
Sbjct: 352 MVDMLGRAGFLDEAY 366
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/370 (36%), Positives = 212/370 (57%), Gaps = 2/370 (0%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
++VHG +++GL D + L+ + GK+ VFD++ D +WN +I +
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 101 GSPEHALVLFKEMLLKG-FAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYV 159
G E A+ +FK M + D+ T + AC A + G ++ + F +
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVRI 184
Query: 160 QNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNV 219
N +++ + KCG + VFD MR +V WT+++ G ++ G++D AR +F+ P K+V
Sbjct: 185 GNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDV 244
Query: 220 VSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDY 279
V WTAM++GYV+ R EA +LF MQ +RP+ F LVSL++ C + G+L+ GKWIH Y
Sbjct: 245 VLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGY 304
Query: 280 AIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEA 339
+N + + +GTAL+DMY+KCG ++ A VF + ER+ A+W ++I L ++G+S A
Sbjct: 305 INENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRA 364
Query: 340 LDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVE 399
LDL+ EME V DA+TFV VL+AC H V EG + F MTE + + P EH C+++
Sbjct: 365 LDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLID 424
Query: 400 LYTGDSELDE 409
L LDE
Sbjct: 425 LLCRAGLLDE 434
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 149/322 (46%), Gaps = 39/322 (12%)
Query: 82 INAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFG 141
+ P +N M++ S L LF E+ +G PD FT P V+K+ G
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 142 RAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIAC 201
VH A+K D+YV N++M Y G E KVFD+M VVSW LI+ +
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 202 GKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLV 261
G+ + A VF M Q N++ +E T+VS +
Sbjct: 126 GRFEDAIGVFKRMS------------------------------QESNLKFDEGTIVSTL 155
Query: 262 SACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLA 321
SAC+ + +L++G+ I+ + + E+ +G AL+DM+ KCG LD A VF M ++N+
Sbjct: 156 SACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVK 214
Query: 322 TWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLM 381
W +M+ G +EA LF+ + V D V + +++ V + +E F M
Sbjct: 215 CWTSMVFGYVSTGRIDEARVLFER----SPVKDVVLWTAMMNGYVQFNRFDEALELFRCM 270
Query: 382 TEHYGISPILEHYVCMVELYTG 403
+ GI P +++V +V L TG
Sbjct: 271 -QTAGIRP--DNFV-LVSLLTG 288
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 8/218 (3%)
Query: 15 FNTPTTRFDSQQALVTLENCCNFKQLKQ---VHGRIIRSGLTHDQVLLRKLLQHSCAYGK 71
T R D+ + L C L+Q +HG I + +T D+V+ L+ G
Sbjct: 270 MQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGC 329
Query: 72 MNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKA 131
+ A VF +I D+ +W +I G ++G AL L+ EM G D T+ V+ A
Sbjct: 330 IETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTA 389
Query: 132 CIASNAFDFGRAV-HALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCS--- 187
C GR + H++ + + + +++ + G ++ ++ DKMRG S
Sbjct: 390 CNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDET 449
Query: 188 -VVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTA 224
V + +L++ G V A V +++ V +A
Sbjct: 450 LVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSA 487
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 224/404 (55%), Gaps = 4/404 (0%)
Query: 20 TRFDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCA--YGKMNYASL 77
+R A+ L++ FK+++Q+H ++ G D L+ ++ + ++YA+
Sbjct: 2 SRIGKHPAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQ 61
Query: 78 VFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKG--FAPDKFTYPFVIKACIAS 135
+ D+ P F N MIR S PE + ++ +L G PD +T F+++AC
Sbjct: 62 ILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGL 121
Query: 136 NAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLI 195
+ G VH + I+ F D +VQ +++ Y + G + KVF+ + V T ++
Sbjct: 122 RMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMV 181
Query: 196 AGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEF 255
CG V AR++F+ MP ++ ++W AMI GY + EA ++F MQ+E V+ N
Sbjct: 182 TACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGV 241
Query: 256 TLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM 315
++S++SACT++G+L G+W H Y +N I++ L T L+D+Y+KCG ++ A VF M
Sbjct: 242 AMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGM 301
Query: 316 TERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGE 375
E+N+ TW++ + L ++G E+ L+LF M++ V P+AVTFV VL C + V+EG+
Sbjct: 302 EEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ 361
Query: 376 RYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
R+F M +GI P LEHY C+V+LY L++ + + M +
Sbjct: 362 RHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPM 405
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 143/401 (35%), Positives = 220/401 (54%), Gaps = 35/401 (8%)
Query: 23 DSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQ---HSCAYGKMNYASLVF 79
++Q ++ + C + ++L Q+ I+S + D + KL+ S M+YA +F
Sbjct: 28 NTQNPILLISKCNSLRELMQIQAYAIKSHI-EDVSFVAKLINFCTESPTESSMSYARHLF 86
Query: 80 DQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFD 139
+ ++ PD +N M RG + +P LF E+L G PD +T+P ++KAC + A +
Sbjct: 87 EAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALE 146
Query: 140 FGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLI 199
GR +H L++K+ + YV T++N Y +C ED
Sbjct: 147 EGRQLHCLSMKLGLDDNVYVCPTLINMYTEC---ED------------------------ 179
Query: 200 ACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVS 259
VD AR VFD + VV + AMI GY + RP EA LF MQ + ++PNE TL+S
Sbjct: 180 ----VDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLS 235
Query: 260 LVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERN 319
++S+C +GSL LGKWIH YA K+ + TALIDM++KCGSLDDA +F M ++
Sbjct: 236 VLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKD 295
Query: 320 LATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFS 379
W+ MI + HG +E+++ +F+ M NV PD +TF+G+L+AC H VEEG +YFS
Sbjct: 296 TQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFS 355
Query: 380 LMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLS 420
M +GI P ++HY MV+L + L++ Y + + +S
Sbjct: 356 QMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPIS 396
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 218/423 (51%), Gaps = 37/423 (8%)
Query: 25 QQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYG---KMNYASLVFDQ 81
L L +C N + L Q+HG I+ G+ D KL+ H CA + YA +
Sbjct: 6 HHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILH-CAISISDALPYARRLLLC 64
Query: 82 INAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFA-PDKFTYPFVIKACIASNAFDF 140
PD+F +N ++RG + S P +++ +F EM+ KGF PD F++ FVIKA +
Sbjct: 65 FPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRT 124
Query: 141 GRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM----------------R 184
G +H A+K +V T++ Y CG E KVFD+M R
Sbjct: 125 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 185 GCSVV---------------SWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGY 229
G V SW ++AG I G+++ A+ +F EMP ++ VSW+ MI G
Sbjct: 185 GNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGI 244
Query: 230 VKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGP 289
E+F F +Q + PNE +L ++SAC++ GS + GK +H + K G
Sbjct: 245 AHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIV 304
Query: 290 FLGTALIDMYSKCGSLDDAWIVF-GIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEK 348
+ ALIDMYS+CG++ A +VF G+ +R + +W +MI L +HG EEA+ LF EM
Sbjct: 305 SVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTA 364
Query: 349 ANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELD 408
V PD ++F+ +L AC H +EEGE YFS M Y I P +EHY CMV+LY +L
Sbjct: 365 YGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQ 424
Query: 409 EVY 411
+ Y
Sbjct: 425 KAY 427
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/406 (33%), Positives = 225/406 (55%), Gaps = 12/406 (2%)
Query: 7 NPDANVPHFNTPTTRFDSQQALVT-LENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQH 65
+PD+N T R ++ L++ L +C N + +H +IIR+ D ++ +L++
Sbjct: 18 DPDSN-------TLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRV 70
Query: 66 SCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTY 125
++YA VF ++ P+ + + MI G SG + L+ M+ PD +
Sbjct: 71 CSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVI 130
Query: 126 PFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRG 185
V+KAC R +HA +K+ F V MM Y K G + K+FD+M
Sbjct: 131 TSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPD 186
Query: 186 CSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGM 245
V+ T +I CG + A E+F ++ K+ V WTAMIDG V+ + +A +LF M
Sbjct: 187 RDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREM 246
Query: 246 QIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSL 305
Q+ENV NEFT V ++SAC+++G+L+LG+W+H + +EL F+G ALI+MYS+CG +
Sbjct: 247 QMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDI 306
Query: 306 DDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSAC 365
++A VF +M ++++ ++NTMI+ L +HG S EA++ F++M P+ VT V +L+AC
Sbjct: 307 NEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNAC 366
Query: 366 VHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVY 411
H ++ G F+ M + + P +EHY C+V+L L+E Y
Sbjct: 367 SHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAY 412
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 131/320 (40%), Gaps = 74/320 (23%)
Query: 28 LVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQ------ 81
+ ++ C+ K +++H ++++ G + + K+++ G++ A +FD+
Sbjct: 130 ITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDH 189
Query: 82 -------------------------INAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLK 116
+ D+ W MI G + AL LF+EM ++
Sbjct: 190 VAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQME 249
Query: 117 GFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDG 176
+ ++FT V+ AC A + GR VH+ R +V N ++N Y +CG+ +
Sbjct: 250 NVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEA 309
Query: 177 CKVFDKMRGCSVVSWTTLIAGLI--------------------------------AC--- 201
+VF MR V+S+ T+I+GL AC
Sbjct: 310 RRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHG 369
Query: 202 GKVDRAREVFDEMP-----SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFT 256
G +D EVF+ M + + ++D + R EA+ E + IE P+
Sbjct: 370 GLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIE---PDHIM 426
Query: 257 LVSLVSACTEMGSLKLGKWI 276
L +L+SAC G+++LG+ I
Sbjct: 427 LGTLLSACKIHGNMELGEKI 446
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 218/371 (58%), Gaps = 19/371 (5%)
Query: 86 DSFTWNVMIRGCT--LSGSPEHALV-LFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGR 142
+SF WN++IR +S H+ + ++ M +PD T+PF++ + G+
Sbjct: 23 ESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 143 AVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACG 202
HA + D +V+ +++N Y CG+ +VFD + +W +++ G
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 203 KVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN-----VRPNEFTL 257
+D AR++FDEMP +NV+SW+ +I+GYV C + EA DLF MQ+ VRPNEFT+
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 258 VSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM-T 316
+++SAC +G+L+ GKW+H Y K +E+ LGTALIDMY+KCGSL+ A VF + +
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 317 ERNLATWNTMITSLGVHGLSEEALDLFKEMEKA-NVVPDAVTFVGVLSACVHMHDVEEGE 375
++++ ++ MI L ++GL++E LF EM + N+ P++VTFVG+L ACVH + EG+
Sbjct: 263 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 322
Query: 376 RYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNVV---ELLQ 432
YF +M E +GI+P ++HY CMV+LY + E E+ SM +V+ LL
Sbjct: 323 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEA----ESFIASMPMEPDVLIWGSLLS 378
Query: 433 ESKLTSVDDIK 443
S++ + DIK
Sbjct: 379 GSRM--LGDIK 387
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 127/293 (43%), Gaps = 43/293 (14%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLL----KGFA-PDKFT 124
G ++ A +FD++ + +W+ +I G + G + AL LF+EM L + F P++FT
Sbjct: 142 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 201
Query: 125 YPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMR 184
V+ AC A + G+ VHA K D + +++ Y KCG+
Sbjct: 202 MSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGS------------ 249
Query: 185 GCSVVSWTTLIAGLIACGKVDRAREVFDEMPS-KNVVSWTAMIDGYVKCQRPVEAFDLFE 243
++RA+ VF+ + S K+V +++AMI E F LF
Sbjct: 250 -------------------LERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFS 290
Query: 244 GMQI-ENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKN-GIELGPFLGTALIDMYSK 301
M +N+ PN T V ++ AC G + GK I+ GI ++D+Y +
Sbjct: 291 EMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGR 350
Query: 302 CGSLDDAWIVFGIMT-ERNLATWNTMITS---LGVHGLSEEALDLFKEMEKAN 350
G + +A M E ++ W ++++ LG E AL E++ N
Sbjct: 351 SGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMN 403
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 140/391 (35%), Positives = 213/391 (54%), Gaps = 35/391 (8%)
Query: 23 DSQQALVTLENCCNFKQLKQ---VHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVF 79
DS + ++ C L+ +HG +++GL D + L++ G M A VF
Sbjct: 108 DSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVF 167
Query: 80 DQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFD 139
D+I +S W V+++G LF M G A D T ++KAC A
Sbjct: 168 DEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGK 227
Query: 140 FGRAVHALAIKMRFWGDT-YVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGL 198
G+ VH ++I+ F + Y+Q ++++ Y KC
Sbjct: 228 VGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCR--------------------------- 260
Query: 199 IACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLV 258
+D AR++F+ +NVV WT +I G+ KC+R VEAFDLF M E++ PN+ TL
Sbjct: 261 ----LLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLA 316
Query: 259 SLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER 318
+++ +C+ +GSL+ GK +H Y I+NGIE+ T+ IDMY++CG++ A VF +M ER
Sbjct: 317 AILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPER 376
Query: 319 NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYF 378
N+ +W++MI + G++GL EEALD F +M+ NVVP++VTFV +LSAC H +V+EG + F
Sbjct: 377 NVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQF 436
Query: 379 SLMTEHYGISPILEHYVCMVELYTGDSELDE 409
MT YG+ P EHY CMV+L E+ E
Sbjct: 437 ESMTRDYGVVPEEEHYACMVDLLGRAGEIGE 467
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 255 bits (652), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 142/387 (36%), Positives = 219/387 (56%), Gaps = 12/387 (3%)
Query: 1 MKISCCN---PDANVP-HF-----NTPTTRFDSQQALVTLENCCNFKQLKQVHGRIIRSG 51
M +SC P ++ P HF + P + +L L NC + L+ +H ++I+ G
Sbjct: 1 MMLSCSPLTVPSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIG 60
Query: 52 LTHDQVLLRKLLQH---SCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALV 108
L + L KL++ S + + YA VF I P+ WN M RG LS P AL
Sbjct: 61 LHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALK 120
Query: 109 LFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYF 168
L+ M+ G P+ +T+PFV+K+C S AF G+ +H +K+ D YV ++++ Y
Sbjct: 121 LYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYV 180
Query: 169 KCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDG 228
+ G ED KVFDK VVS+T LI G + G ++ A+++FDE+P K+VVSW AMI G
Sbjct: 181 QNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISG 240
Query: 229 YVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELG 288
Y + EA +LF+ M NVRP+E T+V++VSAC + GS++LG+ +H + +G
Sbjct: 241 YAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSN 300
Query: 289 PFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEK 348
+ ALID+YSKCG L+ A +F + +++ +WNT+I L +EAL LF+EM +
Sbjct: 301 LKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 360
Query: 349 ANVVPDAVTFVGVLSACVHMHDVEEGE 375
+ P+ VT + +L AC H+ ++ G
Sbjct: 361 SGETPNDVTMLSILPACAHLGAIDIGR 387
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 119/348 (34%), Positives = 181/348 (52%), Gaps = 33/348 (9%)
Query: 55 DQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEML 114
D V L++ + G + A +FD+I D +WN MI G +G+ + AL LFK+M+
Sbjct: 199 DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM 258
Query: 115 LKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEE 174
PD+ T V+ AC S + + GR VH F + + N +++ Y KCG E
Sbjct: 259 KTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELE 318
Query: 175 DGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQR 234
ACG +F+ +P K+V+SW +I GY
Sbjct: 319 ------------------------TACG-------LFERLPYKDVISWNTLIGGYTHMNL 347
Query: 235 PVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKN--GIELGPFLG 292
EA LF+ M PN+ T++S++ AC +G++ +G+WIH Y K G+ L
Sbjct: 348 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 407
Query: 293 TALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVV 352
T+LIDMY+KCG ++ A VF + ++L++WN MI +HG ++ + DLF M K +
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 467
Query: 353 PDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVEL 400
PD +TFVG+LSAC H ++ G F MT+ Y ++P LEHY CM++L
Sbjct: 468 PDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 515
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/453 (30%), Positives = 228/453 (50%), Gaps = 73/453 (16%)
Query: 31 LENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTW 90
+++ + QLKQ+H R++ GL L+ KL+ S ++G + +A VFD + P F W
Sbjct: 28 IDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPW 87
Query: 91 NVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIK 150
N +IRG + + + AL+++ M L +PD FT+P ++KAC + GR VHA +
Sbjct: 88 NAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFR 147
Query: 151 MRFWGDTYVQNTMMNFYFKC---------------------------------GNEEDGC 177
+ F D +VQN ++ Y KC G +
Sbjct: 148 LGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEAL 207
Query: 178 KVFDKMRGCSV-VSWTTLIAGLIA------------------------------------ 200
++F +MR V W L++ L A
Sbjct: 208 EIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMY 267
Query: 201 --CGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLV 258
CG+V A+ +FD+M S N++ W AMI GY K EA D+F M ++VRP+ ++
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 259 SLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER 318
S +SAC ++GSL+ + +++Y ++ F+ +ALIDM++KCGS++ A +VF +R
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 319 NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYF 378
++ W+ MI G+HG + EA+ L++ ME+ V P+ VTF+G+L AC H V EG +F
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 379 SLMTEHYGISPILEHYVCMVELYTGDSELDEVY 411
+ M +H I+P +HY C+++L LD+ Y
Sbjct: 448 NRMADH-KINPQQQHYACVIDLLGRAGHLDQAY 479
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 4/165 (2%)
Query: 259 SLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER 318
SL+ + T LK IH + G++ FL T LI S G + A VF +
Sbjct: 26 SLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRP 82
Query: 319 NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYF 378
+ WN +I + ++AL ++ M+ A V PD+ TF +L AC + ++ G R+
Sbjct: 83 QIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG-RFV 141
Query: 379 SLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKT 423
G + ++ LY L T E + L +T
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/436 (32%), Positives = 227/436 (52%), Gaps = 42/436 (9%)
Query: 7 NPDANVPHFNTPTTRFDSQQALVTL---------ENCCNFKQLKQVHGRIIRSGLTHDQV 57
N ANV P+ A ++L + C K L+ +I++ L D
Sbjct: 747 NAFANVHSLRVPSHHLRDFSASLSLAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCR 806
Query: 58 LLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKG 117
L+ + + ++ +++ A Q+ P+ F +N + +G P +L L+ ML
Sbjct: 807 LMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDS 866
Query: 118 FAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGC 177
+P +TY ++KA +S A FG ++ A K F +Q T+++FY G +
Sbjct: 867 VSPSSYTYSSLVKA--SSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREAR 924
Query: 178 KVFDKMRGCSVVSWTT-------------------------------LIAGLIACGKVDR 206
KVFD+M ++WTT LI G + G +++
Sbjct: 925 KVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQ 984
Query: 207 AREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTE 266
A +F++MP K+++SWT MI GY + +R EA +F M E + P+E T+ +++SAC
Sbjct: 985 AESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAH 1044
Query: 267 MGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTM 326
+G L++GK +H Y ++NG L ++G+AL+DMYSKCGSL+ A +VF + ++NL WN++
Sbjct: 1045 LGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSI 1104
Query: 327 ITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYG 386
I L HG ++EAL +F +ME +V P+AVTFV V +AC H V+EG R + M + Y
Sbjct: 1105 IEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYS 1164
Query: 387 ISPILEHYVCMVELYT 402
I +EHY MV L++
Sbjct: 1165 IVSNVEHYGGMVHLFS 1180
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 141/411 (34%), Positives = 228/411 (55%), Gaps = 12/411 (2%)
Query: 17 TPTTRF---DSQQALVTLENCCNFKQLKQVHGRIIRSGLT-HDQ--VLLRKLLQHSCAYG 70
T T RF ++ V ++ + ++ Q+H I+R L H + VL KL + ++G
Sbjct: 19 TATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHG 78
Query: 71 KMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIK 130
K+ ++ +F Q PD F + I +++G + A +L+ ++L P++FT+ ++K
Sbjct: 79 KIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLK 138
Query: 131 ACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVS 190
+C + G+ +H +K D YV +++ Y K G+ KVFD+M S+VS
Sbjct: 139 SCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVS 194
Query: 191 WTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE-N 249
T +I G V+ AR +FD M +++VSW MIDGY + P +A LF+ + E
Sbjct: 195 STAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGK 254
Query: 250 VRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAW 309
+P+E T+V+ +SAC+++G+L+ G+WIH + + I L + T LIDMYSKCGSL++A
Sbjct: 255 PKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAV 314
Query: 310 IVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEK-ANVVPDAVTFVGVLSACVHM 368
+VF +++ WN MI +HG S++AL LF EM+ + P +TF+G L AC H
Sbjct: 315 LVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHA 374
Query: 369 HDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
V EG R F M + YGI P +EHY C+V L +L Y + + M++
Sbjct: 375 GLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNM 425
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 199/350 (56%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVI 129
G M A VFD+ D +WN +I G G E A+ ++K M +G PD T ++
Sbjct: 205 GDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLV 264
Query: 130 KACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV 189
+C + G+ + + + N +M+ + KCG+ + ++FD + ++V
Sbjct: 265 SSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIV 324
Query: 190 SWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN 249
SWTT+I+G CG +D +R++FD+M K+VV W AMI G V+ +R +A LF+ MQ N
Sbjct: 325 SWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSN 384
Query: 250 VRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAW 309
+P+E T++ +SAC+++G+L +G WIH Y K + L LGT+L+DMY+KCG++ +A
Sbjct: 385 TKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEAL 444
Query: 310 IVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMH 369
VF + RN T+ +I L +HG + A+ F EM A + PD +TF+G+LSAC H
Sbjct: 445 SVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGG 504
Query: 370 DVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
++ G YFS M + ++P L+HY MV+L L+E E+M +
Sbjct: 505 MIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPM 554
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 203/449 (45%), Gaps = 83/449 (18%)
Query: 11 NVPHFNTPTTRFDSQQALVT-------LENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLL 63
++PH ++S + V LE C LKQ+ ++I +GL D +L+
Sbjct: 33 SLPHHRDKPINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLI 92
Query: 64 QHSCAYGK---MNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKG--- 117
CA + ++Y+ + I P+ F+WNV IRG + S +P+ + +L+K+ML G
Sbjct: 93 AF-CALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCE 151
Query: 118 FAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGC 177
PD FTYP + K C G + +K+R ++V N ++ + CG+ E+
Sbjct: 152 SRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENAR 211
Query: 178 KVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVE 237
KVFD+ +VSW LI G G+ ++A V+ M S
Sbjct: 212 KVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMES--------------------- 250
Query: 238 AFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALID 297
E V+P++ T++ LVS+C+ +G L GK ++Y +NG+ + L AL+D
Sbjct: 251 ----------EGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMD 300
Query: 298 MYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGL---------------------- 335
M+SKCG + +A +F + +R + +W TMI+ GL
Sbjct: 301 MFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAM 360
Query: 336 ---------SEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEG---ERYFSLMTE 383
++AL LF+EM+ +N PD +T + LSAC + ++ G RY E
Sbjct: 361 IGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI----E 416
Query: 384 HYGISPILEHYVCMVELYTGDSELDEVYT 412
Y +S + +V++Y + E +
Sbjct: 417 KYSLSLNVALGTSLVDMYAKCGNISEALS 445
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 13/224 (5%)
Query: 15 FNTPTTRFDSQQALVTLENCCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGK 71
T T+ D + L C L +H I + L+ + L L+ G
Sbjct: 380 MQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGN 439
Query: 72 MNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKA 131
++ A VF I +S T+ +I G L G A+ F EM+ G APD+ T+ ++ A
Sbjct: 440 ISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSA 499
Query: 132 CIASNAFDFGRAVHALAIKMRFWGDTYVQN--TMMNFYFKCGNEEDGCKVFDKM-RGCSV 188
C GR + +K RF + +++ M++ + G E+ ++ + M
Sbjct: 500 CCHGGMIQTGRDYFS-QMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADA 558
Query: 189 VSWTTLIAGLIACGKVD----RAREVFDEMPSKNVVSWTAMIDG 228
W L+ G G V+ A+++ + PS + + ++DG
Sbjct: 559 AVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGI--YVLLDG 600
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 155/511 (30%), Positives = 239/511 (46%), Gaps = 80/511 (15%)
Query: 19 TTRFDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLV 78
++R ++ L L C N Q+KQ+H +IIR L D + KL+ + N A V
Sbjct: 14 SSRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRV 73
Query: 79 FDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAF 138
F+Q+ P+ N +IR + P A +F EM G D FTYPF++KAC +
Sbjct: 74 FNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWL 133
Query: 139 DFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCG--NEEDGCKVFDKMRGCSVVSWTTLIA 196
+ +H K+ D YV N +++ Y +CG D K+F+KM VSW +++
Sbjct: 134 PVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLG 193
Query: 197 GLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENV------ 250
GL+ G++ AR +FDEMP ++++SW M+DGY +C+ +AF+LFE M N
Sbjct: 194 GLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTM 253
Query: 251 -----------------------RPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIEL 287
N T +++ E G LK + D + +G++
Sbjct: 254 VMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKF 313
Query: 288 -----------------------------------GPFLGTALIDMYSKCGSLDDAWIVF 312
++ AL+DMY+KCG+L A+ VF
Sbjct: 314 DAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVF 373
Query: 313 GIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVE 372
+ +++L +WNTM+ LGVHG +EA++LF M + + PD VTF+ VL +C H ++
Sbjct: 374 NDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLID 433
Query: 373 EGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNVV---E 429
EG YF M + Y + P +EHY C+V+L L E + M + NVV
Sbjct: 434 EGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPME----PNVVIWGA 489
Query: 430 LLQESKL-TSVDDIKEVINKHYGDLNFSKLD 459
LL ++ VD KEV++ N KLD
Sbjct: 490 LLGACRMHNEVDIAKEVLD------NLVKLD 514
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 207/379 (54%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSG 101
++HG + D + + + G++NYA VFD+++ D TWN MI G
Sbjct: 132 ELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFG 191
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQN 161
+ A LF+EM PD+ ++ AC + + RA++ I+ DT++
Sbjct: 192 LVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLT 251
Query: 162 TMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVS 221
++ Y G + + F KM ++ T +++G CG++D A+ +FD+ K++V
Sbjct: 252 ALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC 311
Query: 222 WTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAI 281
WT MI YV+ P EA +FE M ++P+ ++ S++SAC +G L KW+H
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIH 371
Query: 282 KNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALD 341
NG+E + ALI+MY+KCG LD VF M RN+ +W++MI +L +HG + +AL
Sbjct: 372 VNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALS 431
Query: 342 LFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELY 401
LF M++ NV P+ VTFVGVL C H VEEG++ F+ MT+ Y I+P LEHY CMV+L+
Sbjct: 432 LFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLF 491
Query: 402 TGDSELDEVYTSEEAMSLS 420
+ L E E+M ++
Sbjct: 492 GRANLLREALEVIESMPVA 510
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 170/383 (44%), Gaps = 63/383 (16%)
Query: 18 PTTRFDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASL 77
P + L L C + +KQ+H I+R+ + H L S + ++YA
Sbjct: 6 PIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALN 65
Query: 78 VFDQI-NAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASN 136
VF I + P+S +N +R + S P ++ ++ + G D+F++ ++KA +
Sbjct: 66 VFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVS 125
Query: 137 AFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIA 196
A G +H +A K+ D +V+ M+ Y CG VFD+M VV+W T+I
Sbjct: 126 ALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIE 185
Query: 197 GLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFT 256
G VD A ++F+EM NV+ P+E
Sbjct: 186 RYCRFGLVDEAFKLFEEMKDSNVM-------------------------------PDEMI 214
Query: 257 LVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDM------------------ 298
L ++VSAC G+++ + I+++ I+N + + L TAL+ M
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274
Query: 299 -------------YSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKE 345
YSKCG LDDA ++F +++L W TMI++ +EAL +F+E
Sbjct: 275 VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEE 334
Query: 346 MEKANVVPDAVTFVGVLSACVHM 368
M + + PD V+ V+SAC ++
Sbjct: 335 MCCSGIKPDVVSMFSVISACANL 357
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 90/179 (50%), Gaps = 1/179 (0%)
Query: 207 AREVFDEMPSK-NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACT 265
A VF +PS + + + + P ++ ++ R ++F+ + ++ A +
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 266 EMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNT 325
++ +L G +H A K PF+ T +DMY+ CG ++ A VF M+ R++ TWNT
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 326 MITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEH 384
MI GL +EA LF+EM+ +NV+PD + ++SAC ++ + + E+
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/413 (33%), Positives = 220/413 (53%), Gaps = 49/413 (11%)
Query: 28 LVTLENCCNFKQ---------LKQVHGRIIRSGLT-HDQVLLRKLLQHSCAYGK---MNY 74
L +E C N Q L+Q+H IR G++ D L + L+ + + M+Y
Sbjct: 12 LPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSY 71
Query: 75 ASLVFDQINAP-DSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFA-PDKFTYPFVIKAC 132
A VF +I P + F WN +IRG G+ A L++EM + G PD TYPF+IKA
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 133 IASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWT 192
G +H++ I+ F YVQN++++ Y CG+
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGD-------------------- 171
Query: 193 TLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRP 252
V A +VFD+MP K++V+W ++I+G+ + +P EA L+ M + ++P
Sbjct: 172 -----------VASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKP 220
Query: 253 NEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVF 312
+ FT+VSL+SAC ++G+L LGK +H Y IK G+ L+D+Y++CG +++A +F
Sbjct: 221 DGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLF 280
Query: 313 GIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKA-NVVPDAVTFVGVLSACVHMHDV 371
M ++N +W ++I L V+G +EA++LFK ME ++P +TFVG+L AC H V
Sbjct: 281 DEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMV 340
Query: 372 EEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTN 424
+EG YF M E Y I P +EH+ CMV+L ++ + Y E S+ M+ N
Sbjct: 341 KEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY--EYIKSMPMQPN 391
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 138/304 (45%), Gaps = 42/304 (13%)
Query: 43 VHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGS 102
+H +IRSG + LL G + A VFD++ D WN +I G +G
Sbjct: 143 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 202
Query: 103 PEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNT 162
PE AL L+ EM KG PD FT ++ AC A G+ VH IK+ + + N
Sbjct: 203 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 262
Query: 163 MMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSW 222
+++ Y +CG +V+ A+ +FDEM KN VSW
Sbjct: 263 LLDLYARCG-------------------------------RVEEAKTLFDEMVDKNSVSW 291
Query: 223 TAMIDGYVKCQRPVEAFDLFEGMQ-IENVRPNEFTLVSLVSACTEMGSLKLG-----KWI 276
T++I G EA +LF+ M+ E + P E T V ++ AC+ G +K G +
Sbjct: 292 TSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMR 351
Query: 277 HDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT-ERNLATWNTMITSLGVHGL 335
+Y I+ IE G ++D+ ++ G + A+ M + N+ W T++ + VHG
Sbjct: 352 EEYKIEPRIE---HFG-CMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGD 407
Query: 336 SEEA 339
S+ A
Sbjct: 408 SDLA 411
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 119/299 (39%), Gaps = 60/299 (20%)
Query: 16 NTPTTRFDSQQALVTLENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKM 72
N+ + D + L C L K+VH +I+ GLT + LL G++
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 73 NYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEM-LLKGFAPDKFTYPFVIKA 131
A +FD++ +S +W +I G ++G + A+ LFK M +G P + T+ ++ A
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 132 CIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMR-----GC 186
C CG ++G + F +MR
Sbjct: 334 C-----------------------------------SHCGMVKEGFEYFRRMREEYKIEP 358
Query: 187 SVVSWTTLIAGLIACGKVDRAREVFDEMPSK-NVVSWTAMIDG-YVKCQRPVEAFDLFEG 244
+ + ++ L G+V +A E MP + NVV W ++ V + F +
Sbjct: 359 RIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQI 418
Query: 245 MQIENVRPNEFTLVSLVSACTEMGSLKLGKW-----IHDYAIKNGIELGPFLGTALIDM 298
+Q+E ++ L+S + A + +W I +++G++ P G +L+++
Sbjct: 419 LQLEPNHSGDYVLLSNMYASEQ-------RWSDVQKIRKQMLRDGVKKVP--GHSLVEV 468
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/414 (33%), Positives = 223/414 (53%), Gaps = 3/414 (0%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
K++H +++ GL + + L++ G M+ A VFD+ D F+WN+MI G
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRM 214
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
E ++ L EM +P T V+ AC D + VH + + ++
Sbjct: 215 KEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLE 274
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N ++N Y CG + ++F M+ V+SWT+++ G + G + AR FD+MP ++ +
Sbjct: 275 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 334
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
SWT MIDGY++ E+ ++F MQ + P+EFT+VS+++AC +GSL++G+WI Y
Sbjct: 335 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI 394
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEAL 340
KN I+ +G ALIDMY KCG + A VF M +R+ TW M+ L +G +EA+
Sbjct: 395 DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAI 454
Query: 341 DLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVEL 400
+F +M+ ++ PD +T++GVLSAC H V++ ++F+ M + I P L HY CMV++
Sbjct: 455 KVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDM 514
Query: 401 YTGDSELDEVYTSEEAMSLSMKTNQNVV-ELLQESKLTSVDDIKEVINKHYGDL 453
+ E Y E + M N V LL S+L + + + E+ K +L
Sbjct: 515 LGRAGLVKEAY--EILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILEL 566
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 169/393 (43%), Gaps = 65/393 (16%)
Query: 17 TPTTRFDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAY--GKMNY 74
T + D + + L C Q KQ+H + I G+ + +KL C+ G ++Y
Sbjct: 27 TESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSY 86
Query: 75 ASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIA 134
A +F +I PD WN MI+G + + L+ ML +G PD T+PF++
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 135 -SNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTT 193
A G+ +H +K + YVQN ++ Y CG + D RG
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCG-------LMDMARG-------- 191
Query: 194 LIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPN 253
VFD ++V SW MI GY + + E+ +L M+ V P
Sbjct: 192 ----------------VFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPT 235
Query: 254 EFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFG 313
TL+ ++SAC+++ L K +H+Y + E L AL++ Y+ CG +D A +F
Sbjct: 236 SVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFR 295
Query: 314 IMTERNLATWNT-------------------------------MITSLGVHGLSEEALDL 342
M R++ +W + MI G E+L++
Sbjct: 296 SMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEI 355
Query: 343 FKEMEKANVVPDAVTFVGVLSACVHMHDVEEGE 375
F+EM+ A ++PD T V VL+AC H+ +E GE
Sbjct: 356 FREMQSAGMIPDEFTMVSVLTACAHLGSLEIGE 388
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 2/208 (0%)
Query: 202 GKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLV 261
G V A ++F ++P +VV W MI G+ K E L+ M E V P+ T L+
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 262 SACT-EMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNL 320
+ + G+L GK +H + +K G+ ++ AL+ MYS CG +D A VF + ++
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 321 ATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSL 380
+WN MI+ EE+++L EME+ V P +VT + VLSAC + D + +R
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 381 MTEHYGISPILEHYVCMVELYTGDSELD 408
++E P L +V Y E+D
Sbjct: 262 VSE-CKTEPSLRLENALVNAYAACGEMD 288
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/379 (36%), Positives = 200/379 (52%), Gaps = 32/379 (8%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSG 101
Q H I++ GL D + L+ + G ++AS +FD D TW MI G +G
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKM-RFWGDTYVQ 160
S A+V F EM G A ++ T V+KA FGR+VH L ++ R D ++
Sbjct: 184 SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG 243
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
+++++ Y KC +D A++VFDEMPS+NVV
Sbjct: 244 SSLVDMYGKCSCYDD-------------------------------AQKVFDEMPSRNVV 272
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
+WTA+I GYV+ + + +FE M +V PNE TL S++SAC +G+L G+ +H Y
Sbjct: 273 TWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYM 332
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEAL 340
IKN IE+ GT LID+Y KCG L++A +VF + E+N+ TW MI HG + +A
Sbjct: 333 IKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAF 392
Query: 341 DLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVEL 400
DLF M ++V P+ VTF+ VLSAC H VEEG R F M + + P +HY CMV+L
Sbjct: 393 DLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDL 452
Query: 401 YTGDSELDEVYTSEEAMSL 419
+ L+E E M +
Sbjct: 453 FGRKGLLEEAKALIERMPM 471
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 159/396 (40%), Gaps = 84/396 (21%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGK---MNYASLVFDQINAPDSFTWNVMIRGC 97
+ VHG + +G V + L YGK + A VFD++ + + TW +I G
Sbjct: 224 RSVHGLYLETGRVKCDVFIGSSLVD--MYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGY 281
Query: 98 TLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDT 157
S + +++F+EML AP++ T V+ AC A GR VH IK +T
Sbjct: 282 VQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINT 341
Query: 158 YVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK 217
T+++ Y KCG E+ VF+++ +V +WT +I G A
Sbjct: 342 TAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAA----------------- 384
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
GY + +AFDLF M +V PNE T ++++SAC G ++ G+ +
Sbjct: 385 ---------HGYAR-----DAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLF 430
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSE 337
++K + P D Y+ M+ G GL E
Sbjct: 431 -LSMKGRFNMEP-----KADHYA------------------------CMVDLFGRKGLLE 460
Query: 338 EALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGE----RYFSLMTEHYGISPILEH 393
EA L +E+ + P V + + +C+ D E G+ R L H G
Sbjct: 461 EAKAL---IERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSG------R 511
Query: 394 YVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNVVE 429
Y + LY+ DEV + M +Q VV+
Sbjct: 512 YTLLANLYSESQNWDEVARVRKQMK-----DQQVVK 542
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 5/180 (2%)
Query: 207 AREVFDEMPSKNVVSWTAMI---DGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSA 263
AR + ++ + ++ W ++I G + R + +F + M+ V P+ T L+ A
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRL-SFLAYRHMRRNGVIPSRHTFPPLLKA 113
Query: 264 CTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATW 323
++ ++ H + +K G++ PF+ +LI YS G D A +F ++++ TW
Sbjct: 114 VFKLRDSNPFQF-HAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTW 172
Query: 324 NTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTE 383
MI +G + EA+ F EM+K V + +T V VL A + DV G L E
Sbjct: 173 TAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLE 232
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/376 (33%), Positives = 217/376 (57%), Gaps = 6/376 (1%)
Query: 32 ENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSC--AYGKMNYASLVFDQINAPDSFT 89
C + +L ++H +I GL+ ++ + + L S + G ++YA +++ P ++
Sbjct: 16 HQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYG 75
Query: 90 WNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAI 149
WN +IRG + S +PE ++ ++ +ML G PD TYPF++K+ + G ++H +
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135
Query: 150 KMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRARE 209
K D ++ NT+++ Y ++ K+FD+M ++V+W +++ G V AR
Sbjct: 136 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARL 195
Query: 210 VFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEG-MQIENVRPNEFTLVSLVSACTEMG 268
VFDEM ++VV+W++MIDGYVK +A ++F+ M++ + + NE T+VS++ AC +G
Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLG 255
Query: 269 SLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVF--GIMTERNLATWNTM 326
+L GK +H Y + + L L T+LIDMY+KCGS+ DAW VF + E + WN +
Sbjct: 256 ALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAI 315
Query: 327 ITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYG 386
I L HG E+L LF +M ++ + PD +TF+ +L+AC H V+E +F + E G
Sbjct: 316 IGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-G 374
Query: 387 ISPILEHYVCMVELYT 402
P EHY CMV++ +
Sbjct: 375 AEPKSEHYACMVDVLS 390
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 206/385 (53%), Gaps = 7/385 (1%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSG 101
QVH I +S D + L+ G +N A VFD++ + +WN +I +G
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNG 232
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKM-RFWGDTYVQ 160
AL +F+ ML PD+ T VI AC + +A G+ VH +K + D +
Sbjct: 233 PAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILS 292
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N ++ Y KC ++ +FD M +V++ T++I+G AR +F +M +NVV
Sbjct: 293 NAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVV 352
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
SW A+I GY + EA LF ++ E+V P ++ +++ AC ++ L LG H +
Sbjct: 353 SWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHV 412
Query: 281 IKNGIELGP------FLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHG 334
+K+G + F+G +LIDMY KCG +++ ++VF M ER+ +WN MI +G
Sbjct: 413 LKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNG 472
Query: 335 LSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHY 394
EAL+LF+EM ++ PD +T +GVLSAC H VEEG YFS MT +G++P+ +HY
Sbjct: 473 YGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHY 532
Query: 395 VCMVELYTGDSELDEVYTSEEAMSL 419
CMV+L L+E + E M +
Sbjct: 533 TCMVDLLGRAGFLEEAKSMIEEMPM 557
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 151/256 (58%), Gaps = 1/256 (0%)
Query: 121 DKFTYPFVIKACIASN-AFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKV 179
D + ++ +CI S + + R VHA IK F + ++QN +++ Y KCG+ EDG +V
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 180 FDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAF 239
FDKM ++ +W +++ GL G +D A +F MP ++ +W +M+ G+ + R EA
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 240 DLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMY 299
F M E NE++ S++SAC+ + + G +H K+ ++G+AL+DMY
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 300 SKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFV 359
SKCG+++DA VF M +RN+ +WN++IT +G + EALD+F+ M ++ V PD VT
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 360 GVLSACVHMHDVEEGE 375
V+SAC + ++ G+
Sbjct: 258 SVISACASLSAIKVGQ 273
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 179/419 (42%), Gaps = 98/419 (23%)
Query: 23 DSQQALVTLENCCNFK----QLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLV 78
DS L++C K ++ VH +I+SG +++ + +L+ G + V
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 79 FDQINAPDSFTWNVMIRGCT--------------------------LSGSPEH-----AL 107
FD++ + +TWN ++ G T +SG +H AL
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 108 VLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFY 167
F M +GF +++++ V+ AC N + G VH+L K F D Y+ + +++ Y
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 168 FKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMID 227
KCGN D +VFD+M +VVSW +LI G
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPA----------------------- 234
Query: 228 GYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNG-IE 286
VEA D+F+ M V P+E TL S++SAC + ++K+G+ +H +KN +
Sbjct: 235 --------VEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLR 286
Query: 287 LGPFLGTALIDMYSKCGSLDDAWIVFGI-------------------------------M 315
L A +DMY+KC + +A +F M
Sbjct: 287 NDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKM 346
Query: 316 TERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEG 374
ERN+ +WN +I +G +EEAL LF +++ +V P +F +L AC + ++ G
Sbjct: 347 AERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLG 405
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 135/394 (34%), Positives = 213/394 (54%), Gaps = 9/394 (2%)
Query: 23 DSQQALVTLENCCNFKQLKQVHGRIIRSG-LTHDQVLLRKLLQHSCAYGKMNYASLVFDQ 81
D Q L ++ ++KQ+H II SG L+ L L++ G A VF +
Sbjct: 132 DRQTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFAR 191
Query: 82 INAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFG 141
+ PD ++NVMI G G AL L+ +M+ G PD++T ++ C + G
Sbjct: 192 MPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLG 251
Query: 142 RAVHALAIKMR---FWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGL 198
+ VH I+ R + + + N +++ YFKC + FD M+ + SW T++ G
Sbjct: 252 KGVHGW-IERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGF 310
Query: 199 IACGKVDRAREVFDEMPSKNVVSWTAMIDGYVK--C-QRPVEAFDLFEGMQIENVRPNEF 255
+ G ++ A+ VFD+MP +++VSW +++ GY K C QR V +E +E V+P+
Sbjct: 311 VRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVREL-FYEMTIVEKVKPDRV 369
Query: 256 TLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM 315
T+VSL+S G L G+W+H I+ ++ FL +ALIDMY KCG ++ A++VF
Sbjct: 370 TMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTA 429
Query: 316 TERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGE 375
TE+++A W +MIT L HG ++AL LF M++ V P+ VT + VL+AC H VEEG
Sbjct: 430 TEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGL 489
Query: 376 RYFSLMTEHYGISPILEHYVCMVELYTGDSELDE 409
F+ M + +G P EHY +V+L ++E
Sbjct: 490 HVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEE 523
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 160/349 (45%), Gaps = 49/349 (14%)
Query: 17 TPTTRFD-------SQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSC-A 68
+ TT++D + Q+LV LENC + Q KQV +I+R L D + +L+ S
Sbjct: 20 SKTTKWDPVQSLQLNHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAIT 79
Query: 69 YGK-MNYASLVFDQINA-PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYP 126
Y + ++ A L+F P+ F +N MI +S S L+ M+ +PD+ T+
Sbjct: 80 YPENLDLAKLLFLNFTPNPNVFVYNTMI--SAVSSSKNECFGLYSSMIRHRVSPDRQTFL 137
Query: 127 FVIKACIASNAFDFGRAVHA-LAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRG 185
+++K AS+ + +H + + Y+ N+++ FY + GN KVF +
Sbjct: 138 YLMK---ASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFAR--- 191
Query: 186 CSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGM 245
MP +V S+ MI GY K +EA L+ M
Sbjct: 192 ----------------------------MPHPDVSSFNVMIVGYAKQGFSLEALKLYFKM 223
Query: 246 QIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGP--FLGTALIDMYSKCG 303
+ + P+E+T++SL+ C + ++LGK +H + + G L AL+DMY KC
Sbjct: 224 VSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCK 283
Query: 304 SLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVV 352
A F M ++++ +WNTM+ G E A +F +M K ++V
Sbjct: 284 ESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLV 332
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/433 (31%), Positives = 228/433 (52%), Gaps = 36/433 (8%)
Query: 23 DSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQI 82
D + + C + L+ VH +I+R G+ +V +L+ S +Y+ +F
Sbjct: 28 DESHFISLIHACKDTASLRHVHAQILRRGVLSSRVAA-QLVSCSSLLKSPDYSLSIFRNS 86
Query: 83 NAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGR 142
+ F N +IRG T + E ++ F ML G PD+ T+PFV+K+ GR
Sbjct: 87 EERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGR 146
Query: 143 AVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVF----DKMRGCSVV--------- 189
A+HA +K D++V+ ++++ Y K G + +VF D+++ S++
Sbjct: 147 ALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGY 206
Query: 190 ----------------------SWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMID 227
SW+TLI G + G+++RA+++F+ MP KNVVSWT +I+
Sbjct: 207 CRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLIN 266
Query: 228 GYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIEL 287
G+ + A + M + ++PNE+T+ +++SAC++ G+L G IH Y + NGI+L
Sbjct: 267 GFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKL 326
Query: 288 GPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEME 347
+GTAL+DMY+KCG LD A VF M +++ +W MI VHG +A+ F++M
Sbjct: 327 DRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMM 386
Query: 348 KANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSEL 407
+ PD V F+ VL+AC++ +V+ G +F M Y I P L+HYV +V+L +L
Sbjct: 387 YSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKL 446
Query: 408 DEVYTSEEAMSLS 420
+E + E M ++
Sbjct: 447 NEAHELVENMPIN 459
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 109/247 (44%), Gaps = 20/247 (8%)
Query: 192 TTLIAGLIACGKV----DRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQI 247
+ + A L++C + D + +F +N A+I G + R + F M
Sbjct: 60 SRVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLR 119
Query: 248 ENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDD 307
V+P+ T ++ + +++G LG+ +H +KN ++ F+ +L+DMY+K G L
Sbjct: 120 LGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKH 179
Query: 308 AWIVFGIMTER----NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLS 363
A+ VF +R ++ WN +I A LF+ M + N + ++ ++
Sbjct: 180 AFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERN----SGSWSTLIK 235
Query: 364 ACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELY--TGDSELDEVYTSEEAMSLSM 421
V ++ ++ F LM E +S + ++ + TGD E + T E + +
Sbjct: 236 GYVDSGELNRAKQLFELMPEKNVVS-----WTTLINGFSQTGDYE-TAISTYFEMLEKGL 289
Query: 422 KTNQNVV 428
K N+ +
Sbjct: 290 KPNEYTI 296
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 235 bits (599), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 133/376 (35%), Positives = 204/376 (54%), Gaps = 33/376 (8%)
Query: 38 KQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGC 97
KQLK++H ++R+G + LL +LL++ G M YA VFD+++ P F WN + +G
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGY 84
Query: 98 TLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDT 157
+ P +L+L+K+M G PD+FTYPFV+KA F G A+HA +K F
Sbjct: 85 VRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGF---- 140
Query: 158 YVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK 217
GC + T L+ + G++ A +F+ M K
Sbjct: 141 ---------------------------GCLGIVATELVMMYMKFGELSSAEFLFESMQVK 173
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
++V+W A + V+ A + F M + V+ + FT+VS++SAC ++GSL++G+ I+
Sbjct: 174 DLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIY 233
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSE 337
D A K I+ + A +DM+ KCG+ + A ++F M +RN+ +W+TMI ++G S
Sbjct: 234 DRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSR 293
Query: 338 EALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEH--YGISPILEHYV 395
EAL LF M+ + P+ VTF+GVLSAC H V EG+RYFSLM + + P EHY
Sbjct: 294 EALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYA 353
Query: 396 CMVELYTGDSELDEVY 411
CMV+L L+E Y
Sbjct: 354 CMVDLLGRSGLLEEAY 369
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 146/368 (39%), Gaps = 68/368 (18%)
Query: 43 VHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGS 102
+H +++ G ++ +L+ +G+++ A +F+ + D WN + C +G+
Sbjct: 131 LHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGN 190
Query: 103 PEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNT 162
AL F +M D FT ++ AC + + G ++ A K + V+N
Sbjct: 191 SAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENA 250
Query: 163 MMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSW 222
++ + KC G + AR +F+EM +NVVSW
Sbjct: 251 RLDMHLKC-------------------------------GNTEAARVLFEEMKQRNVVSW 279
Query: 223 TAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIK 282
+ MI GY EA LF MQ E +RPN T + ++SAC+ G + GK ++
Sbjct: 280 STMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQ 339
Query: 283 -NGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALD 341
N L P + M+ LG GL EEA +
Sbjct: 340 SNDKNLEP-----------------------------RKEHYACMVDLLGRSGLLEEAYE 370
Query: 342 LFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISP-ILEHYVCMVEL 400
K+M V PD + +L AC D+ G++ ++ E +P I ++V + +
Sbjct: 371 FIKKMP---VEPDTGIWGALLGACAVHRDMILGQKVADVLVE---TAPDIGSYHVLLSNI 424
Query: 401 YTGDSELD 408
Y + D
Sbjct: 425 YAAAGKWD 432
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 234 bits (598), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 147/432 (34%), Positives = 237/432 (54%), Gaps = 18/432 (4%)
Query: 36 NFKQLKQVHGRIIRSGLTHDQVLLRKLLQH-SCAYGKMNYASLVFDQINAPDSFTWNVMI 94
+ LKQV +I SGL+H L KLL+ + ++YA +FD+ + P++ + ++
Sbjct: 36 HLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVL 95
Query: 95 RGCTLSGSPEHA---LVLFKEMLLKGFA-PDKFTYPFVIKAC-IASNAFDFGRAVHALAI 149
+ S P HA F+ M+ + P+ F YP V+K+ S+AF VH
Sbjct: 96 TAYS-SSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFS-TPLVHTHLF 153
Query: 150 KMRFWGDTYVQNTMMNFYFKCGNEEDGCK-VFDKMRGCSVVSWTTLIAGLIACGKVDRAR 208
K F VQ +++ Y + + +FD+M +VVSWT +++G G + A
Sbjct: 154 KSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAV 213
Query: 209 EVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE-NVRPNEFTLVSLVSACTEM 267
+F++MP ++V SW A++ + +EA LF M E ++RPNE T+V ++SAC +
Sbjct: 214 ALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQT 273
Query: 268 GSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMI 327
G+L+L K IH +A + + F+ +L+D+Y KCG+L++A VF + ++++L WN+MI
Sbjct: 274 GTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMI 333
Query: 328 TSLGVHGLSEEALDLFKEMEKAN---VVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEH 384
+HG SEEA+ +F+EM K N + PD +TF+G+L+AC H V +G YF LMT
Sbjct: 334 NCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNR 393
Query: 385 YGISPILEHYVCMVELYTGDSELDEVYTSEEAMS-LSMKTNQNV-VELLQESKLTSVDDI 442
+GI P +EHY C+++L DE E MS + MK ++ + LL K+ D+
Sbjct: 394 FGIEPRIEHYGCLIDLLGRAGRFDEAL---EVMSTMKMKADEAIWGSLLNACKIHGHLDL 450
Query: 443 KEVINKHYGDLN 454
EV K+ LN
Sbjct: 451 AEVAVKNLVALN 462
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 234 bits (598), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 134/402 (33%), Positives = 204/402 (50%), Gaps = 15/402 (3%)
Query: 31 LENCCNFKQLKQVHGRIIRSG-----LTHDQVLLRKLL-------QHSCAYGKMNYASLV 78
L+ C K L Q H + I SG + V L S + ++YA+ V
Sbjct: 11 LKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSV 70
Query: 79 FDQINAPDSFTWNVMIRGCTL-SGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNA 137
F I P +F +N +IR CTL S + F EM + PD T+PFV KAC A
Sbjct: 71 FRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKN 130
Query: 138 FDFG--RAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLI 195
D + +H A++ D + NT++ Y + ++FD+ VV++ LI
Sbjct: 131 GDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLI 190
Query: 196 AGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEF 255
GL+ ++ RARE+FD MP +++VSW ++I GY + EA LF+ M ++P+
Sbjct: 191 DGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNV 250
Query: 256 TLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM 315
+VS +SAC + G + GK IHDY + + + FL T L+D Y+KCG +D A +F +
Sbjct: 251 AIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELC 310
Query: 316 TERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGE 375
+++ L TWN MIT L +HG E +D F++M + + PD VTF+ VL C H V+E
Sbjct: 311 SDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEAR 370
Query: 376 RYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAM 417
F M Y ++ ++HY CM +L ++E E M
Sbjct: 371 NLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQM 412
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 134/358 (37%), Gaps = 72/358 (20%)
Query: 75 ASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIA 134
A +FD + D +WN +I G A+ LF EM+ G PD + AC
Sbjct: 202 ARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQ 261
Query: 135 SNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTL 194
S + G+A+H + R + D+++ +++FY KCG
Sbjct: 262 SGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGF---------------------- 299
Query: 195 IAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNE 254
+D A E+F+ K + +W AMI G D F M ++P+
Sbjct: 300 ---------IDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDG 350
Query: 255 FTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGI 314
T +S++ C+ G + + +++ + SL D
Sbjct: 351 VTFISVLVGCSHSGLVDEAR----------------------NLFDQMRSLYD------- 381
Query: 315 MTERNLATWNTMITSLGVHGLSEEALDLFKEMEK-ANVVPDAVTFVGVLSACVHMHDVEE 373
R + + M LG GL EEA ++ ++M K + + G+L C ++E
Sbjct: 382 -VNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEI 440
Query: 374 GE----RYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNV 427
E R +L E G+ Y MVE+Y +EV E + K +NV
Sbjct: 441 AEKAANRVKALSPEDGGV------YKVMVEMYANAERWEEVVKVREIIDRDKKVKKNV 492
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 234 bits (597), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 202/396 (51%), Gaps = 41/396 (10%)
Query: 24 SQQALVTLENCCNFKQ----LKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVF 79
SQQ L CC + +VH I+ +G D L KL+ G ++YA VF
Sbjct: 76 SQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVF 135
Query: 80 DQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIAS---- 135
D+ + WN + R TL+G E L L+ +M G D+FTY +V+KAC+AS
Sbjct: 136 DKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTV 195
Query: 136 NAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLI 195
N G+ +HA + + Y+ T+++ Y + G
Sbjct: 196 NHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFG------------------------ 231
Query: 196 AGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGM--QIENVRPN 253
C VD A VF MP +NVVSW+AMI Y K + EA F M + ++ PN
Sbjct: 232 -----C--VDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPN 284
Query: 254 EFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFG 313
T+VS++ AC + +L+ GK IH Y ++ G++ + +AL+ MY +CG L+ VF
Sbjct: 285 SVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFD 344
Query: 314 IMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEE 373
M +R++ +WN++I+S GVHG ++A+ +F+EM P VTFV VL AC H VEE
Sbjct: 345 RMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEE 404
Query: 374 GERYFSLMTEHYGISPILEHYVCMVELYTGDSELDE 409
G+R F M +GI P +EHY CMV+L + LDE
Sbjct: 405 GKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDE 440
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 59/115 (51%)
Query: 252 PNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIV 311
P++ T L+ C SL +H + + NG + PFL T LI MYS GS+D A V
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 312 FGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACV 366
F +R + WN + +L + G EE L L+ +M + V D T+ VL ACV
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACV 189
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 150/463 (32%), Positives = 222/463 (47%), Gaps = 42/463 (9%)
Query: 2 KISCCNPDANVPHFNTPTTRFDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRK 61
K+S P + + T F Q L T + + L+ VH RII L + L K
Sbjct: 23 KVSSSLPKLELDQKSPQETVFLLGQVLDTYPD---IRTLRTVHSRIILEDLRCNSSLGVK 79
Query: 62 LLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPD 121
L++ + + A VFD+I + NVMIR +G + +F M PD
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 122 KFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFD 181
+T+P V+KAC S GR +H A K+ +V N +++ Y KCG + V D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 182 KMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPS------------------------- 216
+M VVSW +L+ G + D A EV EM S
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 217 ------------KNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSAC 264
K++VSW MI Y+K PVEA +L+ M+ + P+ ++ S++ AC
Sbjct: 260 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Query: 265 TEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWN 324
+ +L LGK IH Y + + L ALIDMY+KCG L+ A VF M R++ +W
Sbjct: 320 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWT 379
Query: 325 TMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEH 384
MI++ G G +A+ LF +++ + +VPD++ FV L+AC H +EEG F LMT+H
Sbjct: 380 AMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 439
Query: 385 YGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNV 427
Y I+P LEH CMV+L ++ E Y + M SM+ N+ V
Sbjct: 440 YKITPRLEHLACMVDLLGRAGKVKEAYRFIQDM--SMEPNERV 480
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 35/263 (13%)
Query: 74 YASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACI 133
Y +F ++ +WNVMI + P A+ L+ M GF PD + V+ AC
Sbjct: 261 YVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACG 320
Query: 134 ASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTT 193
++A G+ +H + + + ++N +++ Y KCG
Sbjct: 321 DTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCG---------------------- 358
Query: 194 LIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPN 253
C +++AR+VF+ M S++VVSWTAMI Y R +A LF +Q + P+
Sbjct: 359 -------C--LEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPD 409
Query: 254 EFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLG--TALIDMYSKCGSLDDAWIV 311
V+ ++AC+ G L+ G+ + + ++ P L ++D+ + G + +A+
Sbjct: 410 SIAFVTTLAACSHAGLLEEGRSCFKL-MTDHYKITPRLEHLACMVDLLGRAGKVKEAYRF 468
Query: 312 FGIMT-ERNLATWNTMITSLGVH 333
M+ E N W ++ + VH
Sbjct: 469 IQDMSMEPNERVWGALLGACRVH 491
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 133/380 (35%), Positives = 197/380 (51%), Gaps = 7/380 (1%)
Query: 45 GRIIRSGLTHDQVLLRKL------LQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCT 98
G+ I + DQ+ LR L + G + A +VFD + D +WN M+ G
Sbjct: 96 GKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYA 155
Query: 99 LSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTY 158
G+ AL +KE G ++F++ ++ AC+ S R H + F +
Sbjct: 156 QDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVV 215
Query: 159 VQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKN 218
+ ++++ Y KCG E + FD+M + WTTLI+G G ++ A ++F EMP KN
Sbjct: 216 LSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKN 275
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
VSWTA+I GYV+ A DLF M V+P +FT S + A + SL+ GK IH
Sbjct: 276 PVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHG 335
Query: 279 YAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER-NLATWNTMITSLGVHGLSE 337
Y I+ + + ++LIDMYSK GSL+ + VF I ++ + WNTMI++L HGL
Sbjct: 336 YMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGH 395
Query: 338 EALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCM 397
+AL + +M K V P+ T V +L+AC H VEEG R+F MT +GI P EHY C+
Sbjct: 396 KALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACL 455
Query: 398 VELYTGDSELDEVYTSEEAM 417
++L E+ E M
Sbjct: 456 IDLLGRAGCFKELMRKIEEM 475
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 123/252 (48%), Gaps = 6/252 (2%)
Query: 115 LKGFAPDKFTYPF-----VIKACIASNAFDFGRAVHA-LAIKMRFWGDTYVQNTMMNFYF 168
L+ PF +++ C + + G+ +H L I +T + N ++ Y
Sbjct: 34 LESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYM 93
Query: 169 KCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDG 228
KCG D CKVFD+M ++ SW +++G + G + RAR VFD MP ++VVSW M+ G
Sbjct: 94 KCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIG 153
Query: 229 YVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELG 288
Y + EA ++ + ++ NEF+ L++AC + L+L + H + G
Sbjct: 154 YAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSN 213
Query: 289 PFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEK 348
L ++ID Y+KCG ++ A F MT +++ W T+I+ G E A LF EM +
Sbjct: 214 VVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPE 273
Query: 349 ANVVPDAVTFVG 360
N V G
Sbjct: 274 KNPVSWTALIAG 285
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 149/381 (39%), Gaps = 75/381 (19%)
Query: 15 FNTPTTRFDSQQALVTLENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGK 71
F +F+ L C +QL +Q HG+++ +G + VL ++ G+
Sbjct: 170 FRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQ 229
Query: 72 MNYASLVFDQINAPD-------------------------------SFTWNVMIRGCTLS 100
M A FD++ D +W +I G
Sbjct: 230 MESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQ 289
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
GS AL LF++M+ G P++FT+ + A + + G+ +H I+ + V
Sbjct: 290 GSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVI 349
Query: 161 NTMMNFYFKCGNEEDGCKVF---DKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK 217
+++++ Y K G+ E +VF D C V W T+I+ L G +A + D+M
Sbjct: 350 SSLIDMYSKSGSLEASERVFRICDDKHDC--VFWNTMISALAQHGLGHKALRMLDDM--- 404
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG-KWI 276
+K + V+PN TLV +++AC+ G ++ G +W
Sbjct: 405 ------------IKFR----------------VQPNRTTLVVILNACSHSGLVEEGLRWF 436
Query: 277 HDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT-ERNLATWNTMITSLGVHG- 334
+++GI LID+ + G + M E + WN ++ +HG
Sbjct: 437 ESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGN 496
Query: 335 --LSEEALDLFKEMEKANVVP 353
L ++A D +++ + P
Sbjct: 497 EELGKKAADELIKLDPESSAP 517
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 71/168 (42%), Gaps = 32/168 (19%)
Query: 237 EAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIEL-GPFLGTAL 295
+A E + + +R L SL+ C + SLK GKWIH + G + L L
Sbjct: 29 QAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHL 88
Query: 296 IDMYSKCGSLDDA--------------W-----------------IVFGIMTERNLATWN 324
I MY KCG DA W +VF M ER++ +WN
Sbjct: 89 IGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWN 148
Query: 325 TMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVE 372
TM+ G EAL +KE ++ + + +F G+L+ACV ++
Sbjct: 149 TMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQ 196
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 133/400 (33%), Positives = 203/400 (50%), Gaps = 36/400 (9%)
Query: 25 QQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYG----KMNYASLVFD 80
Q+ L L+ C N + KQVH R I+ L + + CA+ MNYA+ +F
Sbjct: 31 QECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFR 90
Query: 81 QINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDF 140
I+ P +F +N MIRG S E AL + EM+ +G PD FTYP ++KAC +
Sbjct: 91 GIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIRE 150
Query: 141 GRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIA 200
G+ +H K+ D +VQN+++N Y +CG
Sbjct: 151 GKQIHGQVFKLGLEADVFVQNSLINMYGRCG----------------------------- 181
Query: 201 CGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE-NVRPNEFTLVS 259
+++ + VF+++ SK SW++M+ E LF GM E N++ E +VS
Sbjct: 182 --EMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVS 239
Query: 260 LVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERN 319
+ AC G+L LG IH + ++N EL + T+L+DMY KCG LD A +F M +RN
Sbjct: 240 ALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRN 299
Query: 320 LATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFS 379
T++ MI+ L +HG E AL +F +M K + PD V +V VL+AC H V+EG R F+
Sbjct: 300 NLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFA 359
Query: 380 LMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
M + + P EHY C+V+L L+E + +++ +
Sbjct: 360 EMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPI 399
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 228 bits (582), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 144/455 (31%), Positives = 219/455 (48%), Gaps = 78/455 (17%)
Query: 28 LVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS 87
L L+ C + QL+Q+ +++ + L+ K ++ G NY+S +F P+
Sbjct: 41 LFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVE----LGDFNYSSFLFSVTEEPNH 96
Query: 88 FTWNVMIRGCTLS-GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHA 146
+++N MIRG T + E AL L++ M G PDKFTY FV AC GR+VH+
Sbjct: 97 YSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHS 156
Query: 147 LAIKMRFWGDTYVQ-------------------------------NTMMNFYFKCGNEED 175
K+ D ++ N+M++ Y + G +D
Sbjct: 157 SLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKD 216
Query: 176 GCKVFDKMR---------------------------------------GCSVVSWTTLIA 196
+F KM G S + LI+
Sbjct: 217 AMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLIS 276
Query: 197 GLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFT 256
CG +D AR VF++M K+ V+WTAMI Y + + EAF LF M+ V P+ T
Sbjct: 277 MYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGT 336
Query: 257 LVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT 316
L +++SAC +G+L+LGK I +A + ++ ++ T L+DMY KCG +++A VF M
Sbjct: 337 LSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP 396
Query: 317 ERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
+N ATWN MIT+ G ++EAL LF M +V P +TF+GVLSACVH V +G R
Sbjct: 397 VKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCR 453
Query: 377 YFSLMTEHYGISPILEHYVCMVELYTGDSELDEVY 411
YF M+ +G+ P +EHY +++L + LDE +
Sbjct: 454 YFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAW 488
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 228 bits (582), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 126/376 (33%), Positives = 196/376 (52%), Gaps = 4/376 (1%)
Query: 39 QLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCT 98
+L ++H ++R L +LL + + +YA+ VF I P+ +N MI+ +
Sbjct: 19 RLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYS 78
Query: 99 LSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTY 158
L G P +L F M +G D++TY ++K+C + + FG+ VH I+ F
Sbjct: 79 LVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGK 138
Query: 159 VQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKN 218
++ ++ Y G D KVFD+M +VV W +I G G V+R +F +M ++
Sbjct: 139 IRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERS 198
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
+VSW +MI KC R EA +LF M + P+E T+V+++ +G L GKWIH
Sbjct: 199 IVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHS 258
Query: 279 YAIKNGIELGPFL--GTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLS 336
A +G+ F+ G AL+D Y K G L+ A +F M RN+ +WNT+I+ V+G
Sbjct: 259 TAESSGL-FKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKG 317
Query: 337 EEALDLFKEM-EKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYV 395
E +DLF M E+ V P+ TF+GVL+ C + VE GE F LM E + + EHY
Sbjct: 318 EFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYG 377
Query: 396 CMVELYTGDSELDEVY 411
MV+L + + E +
Sbjct: 378 AMVDLMSRSGRITEAF 393
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 228 bits (581), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 128/380 (33%), Positives = 205/380 (53%), Gaps = 7/380 (1%)
Query: 80 DQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKAC--IASNA 137
+Q + + +W I T +G A F +M L G P+ T+ ++ C S +
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 138 FDFGRAVHALAIKMRF-WGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIA 196
G +H A K+ V ++ Y K G + VFD M + V+W T+I
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 197 GLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFT 256
G + G+VD A ++FD+MP ++++SWTAMI+G+VK EA F MQI V+P+
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 257 LVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT 316
+++ ++ACT +G+L G W+H Y + + + +LID+Y +CG ++ A VF M
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME 268
Query: 317 ERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
+R + +WN++I +G + E+L F++M++ PDAVTF G L+AC H+ VEEG R
Sbjct: 269 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR 328
Query: 377 YFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNVVELLQESKL 436
YF +M Y ISP +EHY C+V+LY+ L++ + S+ MK N+ V+ L +
Sbjct: 329 YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDAL--KLVQSMPMKPNEVVIGSLLAACS 386
Query: 437 TSVDDI--KEVINKHYGDLN 454
++I E + KH DLN
Sbjct: 387 NHGNNIVLAERLMKHLTDLN 406
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 107/244 (43%), Gaps = 40/244 (16%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVI 129
G+++ A+ +FD++ D +W MI G G E AL+ F+EM + G PD +
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 130 KACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV 189
AC A FG VH + F + V N++++ Y +CG E +VF M +VV
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV 273
Query: 190 SWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN 249
SW ++I G A G E+ F MQ +
Sbjct: 274 SWNSVIVGFAANGNAH-------------------------------ESLVYFRKMQEKG 302
Query: 250 VRPNEFTLVSLVSACTEMGSLKLG-KWIH----DYAIKNGIELGPFLGTALIDMYSKCGS 304
+P+ T ++AC+ +G ++ G ++ DY I IE G L+D+YS+ G
Sbjct: 303 FKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIE---HYG-CLVDLYSRAGR 358
Query: 305 LDDA 308
L+DA
Sbjct: 359 LEDA 362
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 4/160 (2%)
Query: 28 LVTLENCCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA 84
+ L C N L VH ++ ++ + L+ C G + +A VF +
Sbjct: 210 IAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEK 269
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFG-RA 143
+WN +I G +G+ +LV F++M KGF PD T+ + AC + G R
Sbjct: 270 RTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRY 329
Query: 144 VHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM 183
+ R +++ Y + G ED K+ M
Sbjct: 330 FQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM 369
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 228 bits (581), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 135/410 (32%), Positives = 199/410 (48%), Gaps = 41/410 (10%)
Query: 15 FNTPTTRFDSQQALVTLENCCNFKQLK---QVHGRIIRSG-LTHDQVLLRKL-LQHSCAY 69
N TR D+ L L ++L+ Q+H ++G +HD VL + L C
Sbjct: 212 INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKC-- 269
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVI 129
GK+ S +F + PD +N MI G T +G E +L LFKE++L G + ++
Sbjct: 270 GKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG---ARLRSSTLV 326
Query: 130 KACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV 189
S A+H +K F V + Y K
Sbjct: 327 SLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLN------------------ 368
Query: 190 SWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN 249
+++ AR++FDE P K++ SW AMI GY + +A LF MQ
Sbjct: 369 -------------EIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSE 415
Query: 250 VRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAW 309
PN T+ ++SAC ++G+L LGKW+HD E ++ TALI MY+KCGS+ +A
Sbjct: 416 FSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEAR 475
Query: 310 IVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMH 369
+F +MT++N TWNTMI+ G+HG +EAL++F EM + + P VTF+ VL AC H
Sbjct: 476 RLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAG 535
Query: 370 DVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
V+EG+ F+ M YG P ++HY CMV++ L EAMS+
Sbjct: 536 LVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSI 585
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 149/340 (43%), Gaps = 33/340 (9%)
Query: 31 LENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTW 90
+ + L Q H +II G +D LL KL Q G + YA +F + PD F +
Sbjct: 27 FKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLF 86
Query: 91 NVMIRGCTLSGSPEHALVLFKEMLLK-GFAPDKFTYPFVIKACIASNAFDFGRAVHALAI 149
NV++RG +++ SP +L +F + P+ TY F I A GR +H A+
Sbjct: 87 NVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAV 146
Query: 150 KMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRARE 209
+ + + ++ YFK ED KVFD+M
Sbjct: 147 VDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRM-------------------------- 180
Query: 210 VFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN-VRPNEFTLVSLVSACTEMG 268
P K+ + W MI GY K + VE+ +F + E+ R + TL+ ++ A E+
Sbjct: 181 -----PEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQ 235
Query: 269 SLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMIT 328
L+LG IH A K G ++ T I +YSKCG + +F + ++ +N MI
Sbjct: 236 ELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIH 295
Query: 329 SLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHM 368
+G +E +L LFKE+ + + T V ++ H+
Sbjct: 296 GYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHL 335
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 140/334 (41%), Gaps = 44/334 (13%)
Query: 43 VHGRIIRSG-LTHDQVLLRKLLQHSCAYGKMN---YASLVFDQINAPDSFTWNVMIRGCT 98
+HG ++S L+H V + Y K+N A +FD+ +WN MI G T
Sbjct: 341 IHGYCLKSNFLSHASVST----ALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYT 396
Query: 99 LSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTY 158
+G E A+ LF+EM F+P+ T ++ AC A G+ VH L F Y
Sbjct: 397 QNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIY 456
Query: 159 VQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKN 218
V ++ Y KC G + AR +FD M KN
Sbjct: 457 VSTALIGMYAKC-------------------------------GSIAEARRLFDLMTKKN 485
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
V+W MI GY + EA ++F M + P T + ++ AC+ G +K G I +
Sbjct: 486 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 545
Query: 279 YAI-KNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT-ERNLATWNTMITSLGVHGLS 336
I + G E ++D+ + G L A M+ E + W T++ + +H +
Sbjct: 546 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDT 605
Query: 337 EEALDLFKEMEKANVVPDAVTFVGVLSACVHMHD 370
A + +++ + + PD V + VL + +H D
Sbjct: 606 NLARTVSEKLFELD--PDNVGY-HVLLSNIHSAD 636
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 96/194 (49%), Gaps = 2/194 (1%)
Query: 192 TTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE-NV 250
T L L G + AR++F + +V + ++ G+ + P + +F ++ ++
Sbjct: 56 TKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDL 115
Query: 251 RPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWI 310
+PN T +SA + + G+ IH A+ +G + LG+ ++ MY K ++DA
Sbjct: 116 KPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARK 175
Query: 311 VFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEM-EKANVVPDAVTFVGVLSACVHMH 369
VF M E++ WNTMI+ + + E++ +F+++ ++ D T + +L A +
Sbjct: 176 VFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQ 235
Query: 370 DVEEGERYFSLMTE 383
++ G + SL T+
Sbjct: 236 ELRLGMQIHSLATK 249
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 228 bits (581), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 134/382 (35%), Positives = 208/382 (54%), Gaps = 6/382 (1%)
Query: 40 LKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTL 99
+KQ+H +R+G+ + LL++LL + YA +FD +F +N +I+ +
Sbjct: 4 IKQLHAHCLRTGVDETKDLLQRLL----LIPNLVYARKLFDHHQNSCTFLYNKLIQAYYV 59
Query: 100 SGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYV 159
P ++VL+ + G P T+ F+ A + ++ R +H+ + F D++
Sbjct: 60 HHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFC 119
Query: 160 QNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNV 219
T++ Y K G +VFD+M V W +I G G + A E+FD MP KNV
Sbjct: 120 CTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNV 179
Query: 220 VSWTAMIDGYVKCQRPVEAFDLFEGMQIE-NVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
SWT +I G+ + EA +F M+ + +V+PN T+VS++ AC +G L++G+ +
Sbjct: 180 TSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEG 239
Query: 279 YAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFG-IMTERNLATWNTMITSLGVHGLSE 337
YA +NG ++ A I+MYSKCG +D A +F + +RNL +WN+MI SL HG +
Sbjct: 240 YARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHD 299
Query: 338 EALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCM 397
EAL LF +M + PDAVTFVG+L ACVH V +G+ F M E + ISP LEHY CM
Sbjct: 300 EALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCM 359
Query: 398 VELYTGDSELDEVYTSEEAMSL 419
++L +L E Y + M +
Sbjct: 360 IDLLGRVGKLQEAYDLIKTMPM 381
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 139/352 (39%), Gaps = 71/352 (20%)
Query: 38 KQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGC 97
+ L+ +H + RSG D L+ G + A VFD+++ D WN MI G
Sbjct: 99 RPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGY 158
Query: 98 TLSGSPEHALVLFKEM----------LLKGFA----------------------PDKFTY 125
G + A+ LF M ++ GF+ P+ T
Sbjct: 159 QRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITV 218
Query: 126 PFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRG 185
V+ AC + GR + A + F+ + YV N + Y KC
Sbjct: 219 VSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKC--------------- 263
Query: 186 CSVVSWTTLIAGLIACGKVDRAREVFDEMPSK-NVVSWTAMIDGYVKCQRPVEAFDLFEG 244
G +D A+ +F+E+ ++ N+ SW +MI + EA LF
Sbjct: 264 ----------------GMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQ 307
Query: 245 MQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLG--TALIDMYSKC 302
M E +P+ T V L+ AC G + G+ + +++ ++ P L +ID+ +
Sbjct: 308 MLREGEKPDAVTFVGLLLACVHGGMVVKGQELFK-SMEEVHKISPKLEHYGCMIDLLGRV 366
Query: 303 GSLDDAWIVFGIMTER-NLATWNTMITSLGVHG---LSEEALDLFKEMEKAN 350
G L +A+ + M + + W T++ + HG ++E A + ++E N
Sbjct: 367 GKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTN 418
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 150/499 (30%), Positives = 241/499 (48%), Gaps = 70/499 (14%)
Query: 24 SQQALVTLEN----CCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASL-V 78
S +L++LE C + L Q+H RIIR GL DQ L+ + S + S V
Sbjct: 6 SHPSLLSLETLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSV 65
Query: 79 FDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFA-PDKFTYPFVIKACIASNA 137
F+++ +P ++ WN +I+G + + + M+ G A PD++T+P V+K C +
Sbjct: 66 FERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQ 125
Query: 138 FDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIA- 196
G +VH L +++ F D V + ++FY KC + KVF +M + VSWT L+
Sbjct: 126 VRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVA 185
Query: 197 ------------------------------GLIACGKVDRAREVFDEMPSKNVVSWTAMI 226
GL+ G + A+++FDEMP ++++S+T+MI
Sbjct: 186 YVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMI 245
Query: 227 DGYVKCQ-------------------------------RPVEAFDLFEGMQIENVRPNEF 255
DGY K +P EAF +F M +NV+P+EF
Sbjct: 246 DGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEF 305
Query: 256 TLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGP-FLGTALIDMYSKCGSLDDAWIVFGI 314
+V L+SAC++MG +L + + Y + + ++ ALIDM +KCG +D A +F
Sbjct: 306 IMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEE 365
Query: 315 MTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEG 374
M +R+L ++ +M+ + +HG EA+ LF++M +VPD V F +L C VEEG
Sbjct: 366 MPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEG 425
Query: 375 ERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNVVELLQES 434
RYF LM + Y I +HY C+V L + +L E Y ++M + LL
Sbjct: 426 LRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASA-WGSLLGGC 484
Query: 435 KLTSVDDIKEVINKHYGDL 453
L +I EV+ +H +L
Sbjct: 485 SLHGNTEIAEVVARHLFEL 503
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 134/387 (34%), Positives = 201/387 (51%), Gaps = 5/387 (1%)
Query: 31 LENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTW 90
+E+ + L QVH R+I SG D +LL+ S +G +Y ++ I +
Sbjct: 29 VEDSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIG--KLYCA 86
Query: 91 NVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIK 150
N + + +S SP+ AL + ++L GF PD +T+ +I + D G+ H AIK
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 151 MRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREV 210
VQN++M+ Y CG + K+F ++ +VSW ++IAG++ G V A ++
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 211 FDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSL 270
FDEMP KN++SW MI Y+ P + LF M + NE TLV L++AC L
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 271 KLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSL 330
K G+ +H I+ + + TALIDMY KC + A +F ++ RN TWN MI +
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH 326
Query: 331 GVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPI 390
+HG E L+LF+ M + PD VTFVGVL C V +G+ Y+SLM + + I P
Sbjct: 327 CLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPN 386
Query: 391 LEHYVCMVELYTGDSELDEVYTSEEAM 417
H CM LY+ +E +EEA+
Sbjct: 387 FGHQWCMANLYSSAGFPEE---AEEAL 410
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/408 (32%), Positives = 210/408 (51%), Gaps = 42/408 (10%)
Query: 23 DSQQALVTLENCCN-FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMN----YASL 77
S ++L+ CN KQ+K H I GL + + KLL +N YAS
Sbjct: 9 QSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASS 68
Query: 78 VFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLK---GFAPDKFTYPFVIKACIA 134
+FD I P+SF ++ MIR C+ S P L F M+ + AP T+ F+I AC+
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLK 128
Query: 135 SNAFDFGRAVHALAIKMR-FWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTT 193
+ F G+ +H +K F D++VQ ++ Y V DK+
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIY-----------VEDKL---------- 167
Query: 194 LIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPN 253
+ AR+VFDE+P +VV W +++GYV+C E ++F M ++ + P+
Sbjct: 168 ----------LLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPD 217
Query: 254 EFTLVSLVSACTEMGSLKLGKWIHDYAIKNG-IELGPFLGTALIDMYSKCGSLDDAWIVF 312
EF++ + ++AC ++G+L GKWIH++ K IE F+GTAL+DMY+KCG ++ A VF
Sbjct: 218 EFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVF 277
Query: 313 GIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKAN-VVPDAVTFVGVLSACVHMHDV 371
+T RN+ +W +I +G +++A+ + +E+ + + PD+V +GVL+AC H +
Sbjct: 278 KKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFL 337
Query: 372 EEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
EEG M Y I+P EHY C+V+L LD+ E M +
Sbjct: 338 EEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPM 385
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/383 (32%), Positives = 207/383 (54%), Gaps = 37/383 (9%)
Query: 31 LENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAY---GKMNYASLVFDQINA-PD 86
L+ C + K+L+++H +I +GL H + LL+ CA G +++A L+FD ++ P
Sbjct: 12 LQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRF-CAVSVTGSLSHAQLLFDHFDSDPS 70
Query: 87 SFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFA-PDKFTYPFVIKACIASNAFDFGRAVH 145
+ WN +IRG + S SP ++++ + MLL + PD FT+ F +K+C + +H
Sbjct: 71 TSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIH 130
Query: 146 ALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVD 205
I+ F D V +++ Y A G V+
Sbjct: 131 GSVIRSGFLDDAIVATSLVRCYS-------------------------------ANGSVE 159
Query: 206 RAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACT 265
A +VFDEMP +++VSW MI + +A +++ M E V + +TLV+L+S+C
Sbjct: 160 IASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCA 219
Query: 266 EMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNT 325
+ +L +G +H A E F+ ALIDMY+KCGSL++A VF M +R++ TWN+
Sbjct: 220 HVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNS 279
Query: 326 MITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHY 385
MI GVHG EA+ F++M + V P+A+TF+G+L C H V+EG +F +M+ +
Sbjct: 280 MIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQF 339
Query: 386 GISPILEHYVCMVELYTGDSELD 408
++P ++HY CMV+LY +L+
Sbjct: 340 HLTPNVKHYGCMVDLYGRAGQLE 362
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 152/344 (44%), Gaps = 39/344 (11%)
Query: 27 ALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPD 86
AL + E + + ++HG +IRSG D ++ L++ A G + AS VFD++ D
Sbjct: 113 ALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRD 172
Query: 87 SFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHA 146
+WNVMI + G AL ++K M +G D +T ++ +C +A + G +H
Sbjct: 173 LVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHR 232
Query: 147 LAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDR 206
+A +R +V N +++ Y KCG+ E+ VF+ MR V++W +
Sbjct: 233 IACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNS------------- 279
Query: 207 AREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTE 266
MI GY VEA F M VRPN T + L+ C+
Sbjct: 280 ------------------MIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSH 321
Query: 267 MGSLKLGKWIHDYAIKNGIELGPFLG--TALIDMYSKCGSLDDAW-IVFGIMTERNLATW 323
G +K G H + + L P + ++D+Y + G L+++ +++ + W
Sbjct: 322 QGLVKEGVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLW 380
Query: 324 NTMITSLGVHG---LSEEALDLFKEMEKANVVPDAVTFVGVLSA 364
T++ S +H L E A+ ++E N D V + SA
Sbjct: 381 RTLLGSCKIHRNLELGEVAMKKLVQLEAFN-AGDYVLMTSIYSA 423
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 134/390 (34%), Positives = 210/390 (53%), Gaps = 36/390 (9%)
Query: 25 QQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQ-HSCAYGK-MNYASLVFDQI 82
Q L+ L+ C + K L Q+HG+I S L +D ++ +L++ S + K + +A +
Sbjct: 14 HQCLIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHS 73
Query: 83 NAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGR 142
+ TWN++ RG + S SP ++ ++ EM +G P+K T+PF++KAC + GR
Sbjct: 74 SDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGR 133
Query: 143 AVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACG 202
+ +K F D YV N +++ Y C D
Sbjct: 134 QIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSD--------------------------- 166
Query: 203 KVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVS 262
AR+VFDEM +NVVSW +++ V+ + F+ F M + P+E T+V L+S
Sbjct: 167 ----ARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLS 222
Query: 263 ACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLAT 322
AC G+L LGK +H + +EL LGTAL+DMY+K G L+ A +VF M ++N+ T
Sbjct: 223 ACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWT 280
Query: 323 WNTMITSLGVHGLSEEALDLF-KEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLM 381
W+ MI L +G +EEAL LF K M++++V P+ VTF+GVL AC H V++G +YF M
Sbjct: 281 WSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEM 340
Query: 382 TEHYGISPILEHYVCMVELYTGDSELDEVY 411
+ + I P++ HY MV++ L+E Y
Sbjct: 341 EKIHKIKPMMIHYGAMVDILGRAGRLNEAY 370
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 128/392 (32%), Positives = 203/392 (51%), Gaps = 35/392 (8%)
Query: 31 LENCCNFKQLKQ---VHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS 87
L+ C FK L Q VH I++S HD V+ LL G + A VF+++ D
Sbjct: 67 LKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDF 126
Query: 88 FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHAL 147
TW +I G + P AL+ F +ML G++P++FT VIKA A G +H
Sbjct: 127 VTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGF 186
Query: 148 AIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRA 207
+K F + +V + +++ Y + G +D A
Sbjct: 187 CVKCGFDSNVHVGSALLDLYTRYG-------------------------------LMDDA 215
Query: 208 REVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEM 267
+ VFD + S+N VSW A+I G+ + +A +LF+GM + RP+ F+ SL AC+
Sbjct: 216 QLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSST 275
Query: 268 GSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMI 327
G L+ GKW+H Y IK+G +L F G L+DMY+K GS+ DA +F + +R++ +WN+++
Sbjct: 276 GFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLL 335
Query: 328 TSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGI 387
T+ HG +EA+ F+EM + + P+ ++F+ VL+AC H ++EG Y+ LM + GI
Sbjct: 336 TAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GI 394
Query: 388 SPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
P HYV +V+L +L+ E M +
Sbjct: 395 VPEAWHYVTVVDLLGRAGDLNRALRFIEEMPI 426
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 122/263 (46%), Gaps = 31/263 (11%)
Query: 121 DKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVF 180
D+ Y ++K C GR VHA ++ F D + NT++N Y KCG+ E+ KVF
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 181 DKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFD 240
+KM V+WTTLI+ GY + RP +A
Sbjct: 119 EKMPQRDFVTWTTLIS-------------------------------GYSQHDRPCDALL 147
Query: 241 LFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYS 300
F M PNEFTL S++ A G +H + +K G + +G+AL+D+Y+
Sbjct: 148 FFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYT 207
Query: 301 KCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVG 360
+ G +DDA +VF + RN +WN +I +E+AL+LF+ M + P ++
Sbjct: 208 RYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYAS 267
Query: 361 VLSACVHMHDVEEGERYFSLMTE 383
+ AC +E+G+ + M +
Sbjct: 268 LFGACSSTGFLEQGKWVHAYMIK 290
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 124/380 (32%), Positives = 206/380 (54%), Gaps = 1/380 (0%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
++V+ I SG+ + +++ L+ ++ A +FD+ A + N M
Sbjct: 256 EKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQ 315
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G AL +F M+ G PD+ + I +C +G++ H ++ F +
Sbjct: 316 GLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC 375
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N +++ Y KC ++ ++FD+M +VV+W +++AG + G+VD A E F+ MP KN+V
Sbjct: 376 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQI-ENVRPNEFTLVSLVSACTEMGSLKLGKWIHDY 279
SW +I G V+ EA ++F MQ E V + T++S+ SAC +G+L L KWI+ Y
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 280 AIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEA 339
KNGI+L LGT L+DM+S+CG + A +F +T R+++ W I ++ + G +E A
Sbjct: 496 IEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 340 LDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVE 399
++LF +M + + PD V FVG L+AC H V++G+ F M + +G+SP HY CMV+
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615
Query: 400 LYTGDSELDEVYTSEEAMSL 419
L L+E E M +
Sbjct: 616 LLGRAGLLEEAVQLIEDMPM 635
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 185/351 (52%), Gaps = 36/351 (10%)
Query: 30 TLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYG---KMNYASLVFDQINAPD 86
+L+NC +LK H + + GL +D + KL+ SC G +++A VF+ +
Sbjct: 38 SLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYG 97
Query: 87 S-FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVH 145
+ F +N +IRG SG A++LF M+ G +PDK+T+PF + AC S A G +H
Sbjct: 98 TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157
Query: 146 ALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVD 205
L +KM + D +VQN++++FY +CG + KVFD+M +VVSWT++I G
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGY------- 210
Query: 206 RAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGM-QIENVRPNEFTLVSLVSAC 264
AR F + +A DLF M + E V PN T+V ++SAC
Sbjct: 211 -ARRDFAK-----------------------DAVDLFFRMVRDEEVTPNSVTMVCVISAC 246
Query: 265 TEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWN 324
++ L+ G+ ++ + +GIE+ + +AL+DMY KC ++D A +F NL N
Sbjct: 247 AKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCN 306
Query: 325 TMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGE 375
M ++ GL+ EAL +F M + V PD ++ + +S+C + ++ G+
Sbjct: 307 AMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 172/400 (43%), Gaps = 67/400 (16%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSG 101
Q+HG I++ G D + L+ G+++ A VFD+++ + +W MI G
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 102 SPEHALVLFKEMLL-KGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
+ A+ LF M+ + P+ T VI AC + G V+A + +
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV 274
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
+ +++ Y K C +D A+ +FDE + N+
Sbjct: 275 SALVDMYMK-------------------------------CNAIDVAKRLFDEYGASNLD 303
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
AM YV+ EA +F M VRP+ +++S +S+C+++ ++ GK H Y
Sbjct: 304 LCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYV 363
Query: 281 IKNGIELGPFLGTALIDMYSKC-------------------------------GSLDDAW 309
++NG E + ALIDMY KC G +D AW
Sbjct: 364 LRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAW 423
Query: 310 IVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEME-KANVVPDAVTFVGVLSACVHM 368
F M E+N+ +WNT+I+ L L EEA+++F M+ + V D VT + + SAC H+
Sbjct: 424 ETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHL 483
Query: 369 HDVEEGERYFSLMTEHYGISPILEHYVCMVELYT--GDSE 406
++ ++ E GI + +V++++ GD E
Sbjct: 484 GALDLA-KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPE 522
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 2/177 (1%)
Query: 207 AREVFDEMPSKNV-VSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACT 265
A+EVF+ S + ++I GY EA LF M + P+++T +SAC
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA 145
Query: 266 EMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNT 325
+ + G IH +K G F+ +L+ Y++CG LD A VF M+ERN+ +W +
Sbjct: 146 KSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTS 205
Query: 326 MITSLGVHGLSEEALDLFKEMEK-ANVVPDAVTFVGVLSACVHMHDVEEGERYFSLM 381
MI +++A+DLF M + V P++VT V V+SAC + D+E GE+ ++ +
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI 262
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 124/380 (32%), Positives = 206/380 (54%), Gaps = 1/380 (0%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
++V+ I SG+ + +++ L+ ++ A +FD+ A + N M
Sbjct: 256 EKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQ 315
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G AL +F M+ G PD+ + I +C +G++ H ++ F +
Sbjct: 316 GLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC 375
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N +++ Y KC ++ ++FD+M +VV+W +++AG + G+VD A E F+ MP KN+V
Sbjct: 376 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQI-ENVRPNEFTLVSLVSACTEMGSLKLGKWIHDY 279
SW +I G V+ EA ++F MQ E V + T++S+ SAC +G+L L KWI+ Y
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 280 AIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEA 339
KNGI+L LGT L+DM+S+CG + A +F +T R+++ W I ++ + G +E A
Sbjct: 496 IEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 340 LDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVE 399
++LF +M + + PD V FVG L+AC H V++G+ F M + +G+SP HY CMV+
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615
Query: 400 LYTGDSELDEVYTSEEAMSL 419
L L+E E M +
Sbjct: 616 LLGRAGLLEEAVQLIEDMPM 635
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 185/351 (52%), Gaps = 36/351 (10%)
Query: 30 TLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYG---KMNYASLVFDQINAPD 86
+L+NC +LK H + + GL +D + KL+ SC G +++A VF+ +
Sbjct: 38 SLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYG 97
Query: 87 S-FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVH 145
+ F +N +IRG SG A++LF M+ G +PDK+T+PF + AC S A G +H
Sbjct: 98 TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157
Query: 146 ALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVD 205
L +KM + D +VQN++++FY +CG + KVFD+M +VVSWT++I G
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGY------- 210
Query: 206 RAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGM-QIENVRPNEFTLVSLVSAC 264
AR F + +A DLF M + E V PN T+V ++SAC
Sbjct: 211 -ARRDFAK-----------------------DAVDLFFRMVRDEEVTPNSVTMVCVISAC 246
Query: 265 TEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWN 324
++ L+ G+ ++ + +GIE+ + +AL+DMY KC ++D A +F NL N
Sbjct: 247 AKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCN 306
Query: 325 TMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGE 375
M ++ GL+ EAL +F M + V PD ++ + +S+C + ++ G+
Sbjct: 307 AMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 172/400 (43%), Gaps = 67/400 (16%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSG 101
Q+HG I++ G D + L+ G+++ A VFD+++ + +W MI G
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 102 SPEHALVLFKEMLL-KGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
+ A+ LF M+ + P+ T VI AC + G V+A + +
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV 274
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
+ +++ Y K C +D A+ +FDE + N+
Sbjct: 275 SALVDMYMK-------------------------------CNAIDVAKRLFDEYGASNLD 303
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
AM YV+ EA +F M VRP+ +++S +S+C+++ ++ GK H Y
Sbjct: 304 LCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYV 363
Query: 281 IKNGIELGPFLGTALIDMYSKC-------------------------------GSLDDAW 309
++NG E + ALIDMY KC G +D AW
Sbjct: 364 LRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAW 423
Query: 310 IVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEME-KANVVPDAVTFVGVLSACVHM 368
F M E+N+ +WNT+I+ L L EEA+++F M+ + V D VT + + SAC H+
Sbjct: 424 ETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHL 483
Query: 369 HDVEEGERYFSLMTEHYGISPILEHYVCMVELYT--GDSE 406
++ ++ E GI + +V++++ GD E
Sbjct: 484 GALDLA-KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPE 522
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 2/177 (1%)
Query: 207 AREVFDEMPSKNVV-SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACT 265
A+EVF+ S + ++I GY EA LF M + P+++T +SAC
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA 145
Query: 266 EMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNT 325
+ + G IH +K G F+ +L+ Y++CG LD A VF M+ERN+ +W +
Sbjct: 146 KSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTS 205
Query: 326 MITSLGVHGLSEEALDLFKEMEK-ANVVPDAVTFVGVLSACVHMHDVEEGERYFSLM 381
MI +++A+DLF M + V P++VT V V+SAC + D+E GE+ ++ +
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI 262
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 222 bits (565), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 213/417 (51%), Gaps = 34/417 (8%)
Query: 28 LVTLENCCNFKQLKQVHGRIIRSGLT----------------HDQVLLRKLLQHSC--AY 69
L T + N K +++ +IRSG D + K+ + C +
Sbjct: 77 LSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSR 136
Query: 70 GKMNYASLVFDQINAPD---------------SFTWNVMIRGCTLSGSPEHALVLFKEML 114
++ + SL+F +NA +F WN+MI G G E L LFKEML
Sbjct: 137 NEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEML 196
Query: 115 LKGFAPDKFTYPFVIKACIA-SNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNE 173
F PD +T+ ++ AC A S+ +GR VHA+ +K + +N++++FY K G+
Sbjct: 197 ESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSR 256
Query: 174 EDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQ 233
+D + + + + VSW ++I + G+ ++A EVF P KN+V+WT MI GY +
Sbjct: 257 DDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNG 316
Query: 234 RPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGT 293
+A F M V + F +++ AC+ + L GK IH I G + ++G
Sbjct: 317 DGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGN 376
Query: 294 ALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVP 353
AL+++Y+KCG + +A FG + ++L +WNTM+ + GVHGL+++AL L+ M + + P
Sbjct: 377 ALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKP 436
Query: 354 DAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEV 410
D VTF+G+L+ C H VEEG F M + Y I ++H CM++++ L E
Sbjct: 437 DNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEA 493
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 152/330 (46%), Gaps = 34/330 (10%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVI 129
G++ A VFD + D+ WN M+ + G + A+ LF ++ PD +++ ++
Sbjct: 18 GRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAIL 77
Query: 130 KACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM--RGCS 187
C + FGR + +L I+ F V N++++ Y KC + KVF M +
Sbjct: 78 STCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRN 137
Query: 188 VVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQI 247
V+W +L+ + + + A +VF EMP + +W MI G+ C + LF+ M
Sbjct: 138 EVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLE 197
Query: 248 ENVRPNEFTLVSLVSACT-EMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLD 306
+P+ +T SL++AC+ + ++ G+ +H +KNG +++ Y+K GS D
Sbjct: 198 SEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRD 257
Query: 307 DA--------------WI-----------------VFGIMTERNLATWNTMITSLGVHGL 335
DA W VF + E+N+ TW TMIT G +G
Sbjct: 258 DAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGD 317
Query: 336 SEEALDLFKEMEKANVVPDAVTFVGVLSAC 365
E+AL F EM K+ V D + VL AC
Sbjct: 318 GEQALRFFVEMMKSGVDSDHFAYGAVLHAC 347
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 122/275 (44%), Gaps = 35/275 (12%)
Query: 188 VVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQI 247
+V T+ IA L G++ AR+VFD MP + V+W M+ Y + EA LF ++
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 248 ENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCG---- 303
+ +P++++ +++S C +G++K G+ I I++G + +LIDMY KC
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 304 -----------------------------SLDDAWIVFGIMTERNLATWNTMITSLGVHG 334
+ A VF M +R WN MI+ G
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 335 LSEEALDLFKEMEKANVVPDAVTFVGVLSAC-VHMHDVEEGERYFSLMTEHYGISPILEH 393
E L LFKEM ++ PD TF +++AC +V G ++M ++ G S +E
Sbjct: 184 KLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKN-GWSSAVEA 242
Query: 394 YVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNVV 428
++ YT D+ E++ + + + N +
Sbjct: 243 KNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSI 277
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 221 bits (564), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 133/408 (32%), Positives = 207/408 (50%), Gaps = 42/408 (10%)
Query: 23 DSQQALVTLENCCN-FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMN----YASL 77
S ++L+ CN KQ+K H I GL + + KLL +N YAS
Sbjct: 9 QSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASS 68
Query: 78 VFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLK---GFAPDKFTYPFVIKACIA 134
+FD I P+SF ++ MIR C+ S P L F M+ + P T+ F+I AC+
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLK 128
Query: 135 SNAFDFGRAVHALAIKMR-FWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTT 193
+ F G+ +H +K F D +VQ ++ Y ED +FD
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYV-----EDKL-LFD------------ 170
Query: 194 LIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPN 253
AR+VFDE+P +VV W +++GYV+C E ++F+ M + + P+
Sbjct: 171 -------------ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPD 217
Query: 254 EFTLVSLVSACTEMGSLKLGKWIHDYAIKNG-IELGPFLGTALIDMYSKCGSLDDAWIVF 312
EF++ + ++AC ++G+L GKWIH++ K IE F+GTAL+DMY+KCG ++ A VF
Sbjct: 218 EFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVF 277
Query: 313 GIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKAN-VVPDAVTFVGVLSACVHMHDV 371
+T RN+ +W +I +G +++A +E+ + + PD+V +GVL+AC H +
Sbjct: 278 EKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFL 337
Query: 372 EEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
EEG M YGI+P EHY C+V+L LD+ E M +
Sbjct: 338 EEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPM 385
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 130/391 (33%), Positives = 207/391 (52%), Gaps = 17/391 (4%)
Query: 25 QQALVTLENCCN---FKQLKQVHGRIIRSGLTH--DQVLLRKLLQHSCAYGKMNYASLVF 79
Q+ + L +C + + K++H + SGL L L Q + G+M A +F
Sbjct: 7 QKVRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLF 66
Query: 80 DQI--NAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNA 137
D+I + D+ W ++ + G +++ LF EM K D + + C
Sbjct: 67 DEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLED 126
Query: 138 FDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAG 197
F + H +A+KM V N +M+ Y KCG + ++F+++ SVVSWT ++
Sbjct: 127 LGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDT 186
Query: 198 LIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEF-T 256
++ ++R REVF EMP +N V+WT M+ GY+ E +L M F T
Sbjct: 187 VVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVT 246
Query: 257 LVSLVSACTEMGSLKLGKWIHDYAIKNGIELGP-------FLGTALIDMYSKCGSLDDAW 309
L S++SAC + G+L +G+W+H YA+K + +G +GTAL+DMY+KCG++D +
Sbjct: 247 LCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSM 306
Query: 310 IVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMH 369
VF +M +RN+ TWN + + L +HG +D+F +M + V PD +TF VLSAC H
Sbjct: 307 NVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSG 365
Query: 370 DVEEGERYFSLMTEHYGISPILEHYVCMVEL 400
V+EG R F + YG+ P ++HY CMV+L
Sbjct: 366 IVDEGWRCFHSL-RFYGLEPKVDHYACMVDL 395
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 127/344 (36%), Gaps = 86/344 (25%)
Query: 78 VFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLK-GFAPDKFTYPFVIKACIASN 136
VF ++ ++ W VM+ G +G L L EM+ + G + T ++ AC S
Sbjct: 199 VFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSG 258
Query: 137 AFDFGRAVHALAIKMRF-------WGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV 189
GR VH A+K + D V +++ Y KCGN
Sbjct: 259 NLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGN----------------- 301
Query: 190 SWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN 249
+D + VF M +NVV+W A+ G + D+F M I
Sbjct: 302 --------------IDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IRE 346
Query: 250 VRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAW 309
V+P++ T +++SAC S G +D+ W
Sbjct: 347 VKPDDLTFTAVLSAC-----------------------------------SHSGIVDEGW 371
Query: 310 IVFGIMT----ERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSAC 365
F + E + + M+ LG GL EEA L +EM V P+ V +L +C
Sbjct: 372 RCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMP---VPPNEVVLGSLLGSC 428
Query: 366 VHMHDVEEGERYFSLMTEHYGISP-ILEHYVCMVELYTGDSELD 408
VE ER + E +SP E+ + M +Y + D
Sbjct: 429 SVHGKVEIAER---IKRELIQMSPGNTEYQILMSNMYVAEGRSD 469
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 206/387 (53%), Gaps = 33/387 (8%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
K++HG +RSG + L+ G + A +FD + + +WN MI +
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQN 315
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
+P+ A+++F++ML +G P + + AC + GR +H L++++ + V
Sbjct: 316 ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVV 375
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N++++ Y CK C +VD A +F ++ S+ +V
Sbjct: 376 NSLISMY---------CK----------------------CKEVDTAASMFGKLQSRTLV 404
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
SW AMI G+ + RP++A + F M+ V+P+ FT VS+++A E+ KWIH
Sbjct: 405 SWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVV 464
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEAL 340
+++ ++ F+ TAL+DMY+KCG++ A ++F +M+ER++ TWN MI G HG + AL
Sbjct: 465 MRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAAL 524
Query: 341 DLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVEL 400
+LF+EM+K + P+ VTF+ V+SAC H VE G + F +M E+Y I ++HY MV+L
Sbjct: 525 ELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDL 584
Query: 401 YTGDSELDEVYTSEEAMSLSMKTNQNV 427
L+E + + M + +K NV
Sbjct: 585 LGRAGRLNEAW--DFIMQMPVKPAVNV 609
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 202/407 (49%), Gaps = 38/407 (9%)
Query: 7 NPDANVPHFNT-----PTTRFDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRK 61
NP + HF + P ++ AL+ LE C + K+L+Q+ + ++GL + K
Sbjct: 16 NPPSRHRHFLSERNYIPANVYEHPAALL-LERCSSLKELRQILPLVFKNGLYQEHFFQTK 74
Query: 62 LLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPD 121
L+ C YG ++ A+ VF+ I++ + ++ M++G + AL F M P
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 122 KFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFD 181
+ + +++K C G+ +H L +K F D + + N Y KC
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCR---------- 184
Query: 182 KMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDL 241
+V+ AR+VFD MP +++VSW ++ GY + A ++
Sbjct: 185 ---------------------QVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 223
Query: 242 FEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSK 301
+ M EN++P+ T+VS++ A + + + +GK IH YA+++G + + TAL+DMY+K
Sbjct: 224 VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAK 283
Query: 302 CGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGV 361
CGSL+ A +F M ERN+ +WN+MI + + +EA+ +F++M V P V+ +G
Sbjct: 284 CGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGA 343
Query: 362 LSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELD 408
L AC + D+E G R+ ++ G+ + ++ +Y E+D
Sbjct: 344 LHACADLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVD 389
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 201/387 (51%), Gaps = 5/387 (1%)
Query: 28 LVTLENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA 84
L L+ C + L K +H I++ G+ L L+ G ++A VFD++
Sbjct: 7 LHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPH 66
Query: 85 PDSFTWNVMIRGCTLSG-SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRA 143
D W ++ + S + V G PD F + ++KAC + D GR
Sbjct: 67 RDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQ 126
Query: 144 VHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGK 203
VH I + D V++++++ Y KCG VFD +R + +SWT +++G G+
Sbjct: 127 VHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGR 186
Query: 204 VDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRP-NEFTLVSLVS 262
+ A E+F +P KN+ SWTA+I G+V+ + +EAF +F M+ E V + L S+V
Sbjct: 187 KEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVG 246
Query: 263 ACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLAT 322
AC + + G+ +H I G + F+ ALIDMY+KC + A +F M R++ +
Sbjct: 247 ACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVS 306
Query: 323 WNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMT 382
W ++I + HG +E+AL L+ +M V P+ VTFVG++ AC H+ VE+G F MT
Sbjct: 307 WTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMT 366
Query: 383 EHYGISPILEHYVCMVELYTGDSELDE 409
+ YGI P L+HY C+++L LDE
Sbjct: 367 KDYGIRPSLQHYTCLLDLLGRSGLLDE 393
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/414 (30%), Positives = 206/414 (49%), Gaps = 39/414 (9%)
Query: 37 FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFT------- 89
FK KQ+H SGL D + + G+M A VFD+++ D T
Sbjct: 132 FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCA 191
Query: 90 ----------------------------WNVMIRGCTLSGSPEHALVLFKEMLLKGFAPD 121
WN ++ G SG + A+V+F+++ GF PD
Sbjct: 192 YARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPD 251
Query: 122 KFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFD 181
+ T V+ + S + GR +H IK D V + M++ Y K G+ +F+
Sbjct: 252 QVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFN 311
Query: 182 KMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVE 237
+ I GL G VD+A E+F+ + NVVSWT++I G + + +E
Sbjct: 312 QFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIE 371
Query: 238 AFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALID 297
A +LF MQ+ V+PN T+ S++ AC + +L G+ H +A++ + +G+ALID
Sbjct: 372 ALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALID 431
Query: 298 MYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVT 357
MY+KCG ++ + IVF +M +NL WN+++ +HG ++E + +F+ + + + PD ++
Sbjct: 432 MYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFIS 491
Query: 358 FVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVY 411
F +LSAC + +EG +YF +M+E YGI P LEHY CMV L +L E Y
Sbjct: 492 FTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAY 545
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 169/373 (45%), Gaps = 39/373 (10%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSG 101
Q H RI++SG +D + KL+ Y N A LV I P ++++ +I T +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQN 161
++ +F M G PD P + K C +AF G+ +H ++ D +VQ
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 162 TMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK---- 217
+M + Y +CG D KVFD+M VV+ + L+ G ++ + EM S
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
N+VSW ++ G+ + EA +F+ + P++ T+ S++ + + L +G+ IH
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGS-------------------------------LD 306
Y IK G+ + +A+IDMY K G +D
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 307 DAWIVFGIMTER----NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVL 362
A +F + E+ N+ +W ++I +G EAL+LF+EM+ A V P+ VT +L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 363 SACVHMHDVEEGE 375
AC ++ + G
Sbjct: 396 PACGNIAALGHGR 408
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 145/346 (41%), Gaps = 85/346 (24%)
Query: 89 TWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALA 148
+W +I GC +G AL LF+EM + G P+ T P ++ AC A GR+ H A
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFA 414
Query: 149 IKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAR 208
+++ + +V + +++ Y KCG +++ ++
Sbjct: 415 VRVHLLDNVHVGSALIDMYAKCG-------------------------------RINLSQ 443
Query: 209 EVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMG 268
VF+ MP+KN+V W ++++G+ + E +FE + ++P+ + SL+SAC ++G
Sbjct: 444 IVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVG 503
Query: 269 SLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER-----NLATW 323
D+ W F +M+E L +
Sbjct: 504 LT-----------------------------------DEGWKYFKMMSEEYGIKPRLEHY 528
Query: 324 NTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVE----EGERYFS 379
+ M+ LG G +EA DL KEM PD+ + +L++C ++V+ E+ F
Sbjct: 529 SCMVNLLGRAGKLQEAYDLIKEMP---FEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFH 585
Query: 380 LMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAM-SLSMKTN 424
L E+ G YV + +Y EV + M SL +K N
Sbjct: 586 LEPENPGT------YVLLSNIYAAKGMWTEVDSIRNKMESLGLKKN 625
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/391 (34%), Positives = 200/391 (51%), Gaps = 50/391 (12%)
Query: 31 LENCCNFKQLK---QVHGRI----IRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQIN 83
LE C + + + +VH I +R+ L L+R L SC Y ++ A VFD+++
Sbjct: 99 LETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVR--LYASCGYAEV--AHEVFDRMS 154
Query: 84 APDS--FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFG 141
DS F WN +I G G E A+ L+ +M G PD+FT+P V+KAC + G
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 142 RAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIAC 201
A+H +K F D YV N ++ Y KCG+
Sbjct: 215 EAIHRDLVKEGFGYDVYVLNALVVMYAKCGD----------------------------- 245
Query: 202 GKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLV 261
+ +AR VFD +P K+ VSW +M+ GY+ EA D+F M + P++ V++
Sbjct: 246 --IVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDK---VAIS 300
Query: 262 SACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLA 321
S + S K G+ +H + I+ G+E + ALI +YSK G L A +F M ER+
Sbjct: 301 SVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTV 360
Query: 322 TWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLM 381
+WN +I++ H + L F++M +AN PD +TFV VLS C + VE+GER FSLM
Sbjct: 361 SWNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLM 417
Query: 382 TEHYGISPILEHYVCMVELYTGDSELDEVYT 412
++ YGI P +EHY CMV LY ++E Y+
Sbjct: 418 SKEYGIDPKMEHYACMVNLYGRAGMMEEAYS 448
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 11/137 (8%)
Query: 257 LVSLVSACTEMGSLKLGKWIHD----YAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVF 312
SL+ C + ++ G +H Y ++N + + + L+ +Y+ CG + A VF
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGIS----SKLVRLYASCGYAEVAHEVF 150
Query: 313 GIMTERNLA--TWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHD 370
M++R+ + WN++I+ G E+A+ L+ +M + V PD TF VL AC +
Sbjct: 151 DRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGS 210
Query: 371 VEEGER-YFSLMTEHYG 386
V+ GE + L+ E +G
Sbjct: 211 VQIGEAIHRDLVKEGFG 227
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 13/213 (6%)
Query: 30 TLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFT 89
L +FK +Q+HG +IR G+ + + L+ G++ A +FDQ+ D+ +
Sbjct: 302 VLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVS 361
Query: 90 WNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAI 149
WN +I + + + L F++M PD T+ V+ C + + G + +L
Sbjct: 362 WNAIISAHSKNSN---GLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMS 418
Query: 150 KMRFWGDTYVQNT--MMNFYFKCGNEEDGCKVFDKMRGCSV--VSWTTLIAGLIACGKVD 205
K + D +++ M+N Y + G E+ + + G W L+ G D
Sbjct: 419 K-EYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTD 477
Query: 206 ----RAREVFDEMPSKNVVSWTAMIDGYVKCQR 234
A+ +F E+ N ++ +I Y K +R
Sbjct: 478 IGEVAAQRLF-ELEPDNEHNFELLIRIYSKAKR 509
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/378 (33%), Positives = 189/378 (50%), Gaps = 30/378 (7%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSG 101
Q+HG I+S L + + L G +N A VFDQI PD+ +WNV+I G +G
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNG 350
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQN 161
+ A+ +F +M GF PD + ++ A A G +H+ IK F D V N
Sbjct: 351 YADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCN 410
Query: 162 TMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVS 221
+++ Y C + +F+ R + + VS
Sbjct: 411 SLLTMYTFCSDLYCCFNLFEDFRN------------------------------NADSVS 440
Query: 222 WTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAI 281
W ++ ++ ++PVE LF+ M + P+ T+ +L+ C E+ SLKLG +H Y++
Sbjct: 441 WNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSL 500
Query: 282 KNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALD 341
K G+ F+ LIDMY+KCGSL A +F M R++ +W+T+I G EEAL
Sbjct: 501 KTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALI 560
Query: 342 LFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELY 401
LFKEM+ A + P+ VTFVGVL+AC H+ VEEG + ++ M +GISP EH C+V+L
Sbjct: 561 LFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLL 620
Query: 402 TGDSELDEVYTSEEAMSL 419
L+E + M L
Sbjct: 621 ARAGRLNEAERFIDEMKL 638
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 173/373 (46%), Gaps = 33/373 (8%)
Query: 36 NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIR 95
+ Q +++H I+ S +D +L +L G + A VFD + + ++ +I
Sbjct: 82 SLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVIT 141
Query: 96 GCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWG 155
G + +G A+ L+ +ML + PD+F + +IKAC +S+ G+ +HA IK+
Sbjct: 142 GYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSS 201
Query: 156 DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMP 215
QN ++ Y + F++M A VF +P
Sbjct: 202 HLIAQNALIAMYVR----------FNQM---------------------SDASRVFYGIP 230
Query: 216 SKNVVSWTAMIDGYVKCQRPVEAFD-LFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGK 274
K+++SW+++I G+ + EA L E + PNE+ S + AC+ + G
Sbjct: 231 MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGS 290
Query: 275 WIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHG 334
IH IK+ + G +L DMY++CG L+ A VF + + A+WN +I L +G
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNG 350
Query: 335 LSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHY 394
++EA+ +F +M + +PDA++ +L A + +G + S + + +G L
Sbjct: 351 YADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK-WGFLADLTVC 409
Query: 395 VCMVELYTGDSEL 407
++ +YT S+L
Sbjct: 410 NSLLTMYTFCSDL 422
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 114/258 (44%), Gaps = 32/258 (12%)
Query: 124 TYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM 183
TY +I AC +S + GR +H + DT + N +++ Y KCG+ D
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRD-------- 120
Query: 184 RGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFE 243
AREVFD MP +N+VS+T++I GY + + EA L+
Sbjct: 121 -----------------------AREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYL 157
Query: 244 GMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCG 303
M E++ P++F S++ AC + LGK +H IK ALI MY +
Sbjct: 158 KMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFN 217
Query: 304 SLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVV-PDAVTFVGVL 362
+ DA VF + ++L +W+++I G EAL KEM V P+ F L
Sbjct: 218 QMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSL 277
Query: 363 SACVHMHDVEEGERYFSL 380
AC + + G + L
Sbjct: 278 KACSSLLRPDYGSQIHGL 295
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 78/144 (54%), Gaps = 2/144 (1%)
Query: 233 QRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLG 292
+ +EAFD + +R T +SL+ AC+ SL G+ IHD+ + + + L
Sbjct: 48 REALEAFDFAQKNSSFKIRLR--TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILN 105
Query: 293 TALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVV 352
++ MY KCGSL DA VF M ERNL ++ ++IT +G EA+ L+ +M + ++V
Sbjct: 106 NHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLV 165
Query: 353 PDAVTFVGVLSACVHMHDVEEGER 376
PD F ++ AC DV G++
Sbjct: 166 PDQFAFGSIIKACASSSDVGLGKQ 189
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 207/386 (53%), Gaps = 6/386 (1%)
Query: 38 KQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGC 97
K K++H II++G D + KLL G ++YA VFD++ P +N MI G
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 98 TLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAF-----DFGRAVHALAIKMR 152
G + L+L + M G D +T V+KA + + R VHA IK
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 153 FWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFD 212
D + +++ Y K G E VF+ M+ +VV T++I+G + G V+ A E+F+
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 213 EMPSKNVVSWTAMIDGYVKC-QRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLK 271
K++V + AM++G+ + + + D++ MQ PN T S++ AC+ + S +
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHE 290
Query: 272 LGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLG 331
+G+ +H +K+G+ +G++L+DMY+KCG ++DA VF M E+N+ +W +MI G
Sbjct: 291 VGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYG 350
Query: 332 VHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPIL 391
+G EEAL+LF M++ + P+ VTF+G LSAC H V++G F M Y + P +
Sbjct: 351 KNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKM 410
Query: 392 EHYVCMVELYTGDSELDEVYTSEEAM 417
EHY C+V+L +L++ + AM
Sbjct: 411 EHYACIVDLMGRAGDLNKAFEFARAM 436
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 105/281 (37%), Gaps = 68/281 (24%)
Query: 133 IASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWT 192
I S A G+ +HA IK F D + ++ + KCG +VFD
Sbjct: 45 INSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFD----------- 93
Query: 193 TLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRP 252
E+P + ++ MI GY+K E L + M +
Sbjct: 94 --------------------ELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKA 133
Query: 253 NEFTLVSLVSACTEMGSL-----KLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDD 307
+ +TL ++ A GS L + +H IK +EL L TAL+D Y K G L+
Sbjct: 134 DGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLES 193
Query: 308 AWIVFGIMTERNLATWNTMITSLGVHGLSEEA---------------------------- 339
A VF M + N+ +MI+ G E+A
Sbjct: 194 ARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGET 253
Query: 340 ----LDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
+D++ M++A P+ TF V+ AC + E G++
Sbjct: 254 AKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQ 294
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 176/326 (53%), Gaps = 8/326 (2%)
Query: 75 ASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIA 134
A FD +N D +WN +I G SG + A LF E ++ D FT+ ++ I
Sbjct: 238 ARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ----DVFTWTAMVSGYIQ 293
Query: 135 SNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTL 194
+ + R + + + N M+ Y + E ++FD M +V +W T+
Sbjct: 294 NRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTM 349
Query: 195 IAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNE 254
I G CGK+ A+ +FD+MP ++ VSW AMI GY + EA LF M+ E R N
Sbjct: 350 ITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNR 409
Query: 255 FTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGI 314
+ S +S C ++ +L+LGK +H +K G E G F+G AL+ MY KCGS+++A +F
Sbjct: 410 SSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKE 469
Query: 315 MTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEG 374
M +++ +WNTMI HG E AL F+ M++ + PD T V VLSAC H V++G
Sbjct: 470 MAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKG 529
Query: 375 ERYFSLMTEHYGISPILEHYVCMVEL 400
+YF MT+ YG+ P +HY CMV+L
Sbjct: 530 RQYFYTMTQDYGVMPNSQHYACMVDL 555
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 147/339 (43%), Gaps = 49/339 (14%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEM----------LLKGFA 119
G+ A +FD++ D +WNVMI+G + + A LF+ M +L G+A
Sbjct: 109 GEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYA 168
Query: 120 PDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMM--------------- 164
+ C+ F R + YVQN+ M
Sbjct: 169 QN---------GCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL 219
Query: 165 -------NFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK 217
+ K + + FD M VVSW T+I G GK+D AR++FDE P +
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ 279
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
+V +WTAM+ GY++ + EA +LF+ M NE + ++++ + +++ K +
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELF 335
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSE 337
D + +I Y++CG + +A +F M +R+ +W MI G S
Sbjct: 336 DVMPCRNVS----TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSF 391
Query: 338 EALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
EAL LF +ME+ + +F LS C + +E G++
Sbjct: 392 EALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQ 430
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 131/286 (45%), Gaps = 36/286 (12%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVI 129
GK++ A +FD++ D +W MI G + SG AL LF +M +G ++ ++ +
Sbjct: 357 GKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSAL 416
Query: 130 KACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV 189
C A + G+ +H +K + +V N ++ Y KCG+
Sbjct: 417 STCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS----------------- 459
Query: 190 SWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN 249
++ A ++F EM K++VSW MI GY + A FE M+ E
Sbjct: 460 --------------IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREG 505
Query: 250 VRPNEFTLVSLVSACTEMGSLKLGK-WIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDA 308
++P++ T+V+++SAC+ G + G+ + + G+ ++D+ + G L+DA
Sbjct: 506 LKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDA 565
Query: 309 WIVFGIMT-ERNLATWNTMITSLGVHG---LSEEALDLFKEMEKAN 350
+ M E + A W T++ + VHG L+E A D ME N
Sbjct: 566 HNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPEN 611
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 131/295 (44%), Gaps = 26/295 (8%)
Query: 90 WNVMIRGCTLSGSPEHALVLFKEMLLKGFAP--DKFTYPFVIKACIASNAFDFGRAVHAL 147
WNV I +G AL +FK M P +Y +I + + F+ R +
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRM------PRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 148 AIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRA 207
+ D N M+ Y + N ++F+ M V SW T+++G G VD A
Sbjct: 121 MPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDA 176
Query: 208 REVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEM 267
R VFD MP KN VSW A++ YV+ + EA LF+ + + LVS C
Sbjct: 177 RSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRE-------NWALVSW--NCLLG 227
Query: 268 GSLKLGKWIHDYAIKNGIELGPFLG-TALIDMYSKCGSLDDAWIVFGIMTERNLATWNTM 326
G +K K + + + + + +I Y++ G +D+A +F +++ TW M
Sbjct: 228 GFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAM 287
Query: 327 ITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLM 381
++ + + EEA +LF +M + N V++ +L+ V +E + F +M
Sbjct: 288 VSGYIQNRMVEEARELFDKMPERN----EVSWNAMLAGYVQGERMEMAKELFDVM 338
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 39/272 (14%)
Query: 155 GDTYVQ--NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFD 212
GD+ ++ N ++ Y + G + +VF +M S VS+ +I+G + G+ + AR++FD
Sbjct: 60 GDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFD 119
Query: 213 EMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKL 272
EMP +++VSW MI GYV+ + +A +LFE M +V + +++S + G +
Sbjct: 120 EMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDV----CSWNTMLSGYAQNGCVDD 175
Query: 273 GKWIHDYAI-KNGIELGPFLGT--------------------------ALIDMYSKCGSL 305
+ + D KN + L L+ + K +
Sbjct: 176 ARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKI 235
Query: 306 DDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSAC 365
+A F M R++ +WNT+IT G +EA LF E + V D T+ ++S
Sbjct: 236 VEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE----SPVQDVFTWTAMVSGY 291
Query: 366 VHMHDVEEGERYFSLMTEHYGIS--PILEHYV 395
+ VEE F M E +S +L YV
Sbjct: 292 IQNRMVEEARELFDKMPERNEVSWNAMLAGYV 323
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%)
Query: 27 ALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPD 86
AL T + + KQ+HGR+++ G + LL C G + A+ +F ++ D
Sbjct: 415 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD 474
Query: 87 SFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGR 142
+WN MI G + G E AL F+ M +G PD T V+ AC + D GR
Sbjct: 475 IVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGR 530
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 114/369 (30%), Positives = 188/369 (50%), Gaps = 31/369 (8%)
Query: 43 VHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGS 102
+H +++ G HD + LL G++N A +FD+I TW + G T SG
Sbjct: 133 LHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGR 192
Query: 103 PEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNT 162
A+ LFK+M+ G PD + V+ AC+ D G + +M +++V+ T
Sbjct: 193 HREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTT 252
Query: 163 MMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSW 222
++N Y KCG K+++AR VFD M K++V+W
Sbjct: 253 LVNLYAKCG-------------------------------KMEKARSVFDSMVEKDIVTW 281
Query: 223 TAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIK 282
+ MI GY P E +LF M EN++P++F++V +S+C +G+L LG+W +
Sbjct: 282 STMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDR 341
Query: 283 NGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDL 342
+ F+ ALIDMY+KCG++ + VF M E+++ N I+ L +G + + +
Sbjct: 342 HEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAV 401
Query: 343 FKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYT 402
F + EK + PD TF+G+L CVH +++G R+F+ ++ Y + +EHY CMV+L+
Sbjct: 402 FGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWG 461
Query: 403 GDSELDEVY 411
LD+ Y
Sbjct: 462 RAGMLDDAY 470
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 184/368 (50%), Gaps = 31/368 (8%)
Query: 17 TPTTRFDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYAS 76
P+ QQ + C LKQ+H +I L HD L+ LL+ + + + Y+
Sbjct: 6 VPSATSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSY 65
Query: 77 LVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASN 136
L+F P+ F +N +I G + L LF + G FT+P V+KAC ++
Sbjct: 66 LLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRAS 125
Query: 137 AFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIA 196
+ G +H+L +K CG D V + T+L++
Sbjct: 126 SRKLGIDLHSLVVK-------------------CGFNHD------------VAAMTSLLS 154
Query: 197 GLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFT 256
G+++ A ++FDE+P ++VV+WTA+ GY R EA DLF+ M V+P+ +
Sbjct: 155 IYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYF 214
Query: 257 LVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT 316
+V ++SAC +G L G+WI Y + ++ F+ T L+++Y+KCG ++ A VF M
Sbjct: 215 IVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMV 274
Query: 317 ERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
E+++ TW+TMI + +E ++LF +M + N+ PD + VG LS+C + ++ GE
Sbjct: 275 EKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEW 334
Query: 377 YFSLMTEH 384
SL+ H
Sbjct: 335 GISLIDRH 342
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 128/411 (31%), Positives = 205/411 (49%), Gaps = 64/411 (15%)
Query: 17 TPTTRFDSQQALVTL-ENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYA 75
TP + D + L TL NC + +++++HG I RS
Sbjct: 39 TPLSPQDRNKLLATLLSNCTSLARVRRIHGDIFRS------------------------- 73
Query: 76 SLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIAS 135
+ DQ P +F WN ++R SP A+ ++ M+ PD+++ P VIKA +
Sbjct: 74 -RILDQY--PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQI 130
Query: 136 NAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLI 195
+ F G+ +H++A+++ F GD + ++ + Y K G E+
Sbjct: 131 HDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFEN-------------------- 170
Query: 196 AGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEF 255
AR+VFDE P + + SW A+I G R EA ++F M+ + P++F
Sbjct: 171 -----------ARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDF 219
Query: 256 TLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGP--FLGTALIDMYSKCGSLDDAWIVFG 313
T+VS+ ++C +G L L +H ++ E + +LIDMY KCG +D A +F
Sbjct: 220 TMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFE 279
Query: 314 IMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEE 373
M +RN+ +W++MI +G + EAL+ F++M + V P+ +TFVGVLSACVH VEE
Sbjct: 280 EMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEE 339
Query: 374 GERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTN 424
G+ YF++M + + P L HY C+V+L + D +L E E M MK N
Sbjct: 340 GKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEM--PMKPN 388
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 128/297 (43%), Gaps = 37/297 (12%)
Query: 36 NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIR 95
+F K++H +R G D+ + C G+ A VFD+ +WN +I
Sbjct: 132 DFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIG 191
Query: 96 GCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVH--ALAIKMRF 153
G +G A+ +F +M G PD FT V +C +H L K
Sbjct: 192 GLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEE 251
Query: 154 WGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDE 213
D + N++++ Y KCG ++D A +F+E
Sbjct: 252 KSDIMMLNSLIDMYGKCG-------------------------------RMDLASHIFEE 280
Query: 214 MPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG 273
M +NVVSW++MI GY +EA + F M+ VRPN+ T V ++SAC G ++ G
Sbjct: 281 MRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEG 340
Query: 274 KWIHDYAIKNGIELGPFLG--TALIDMYSKCGSLDDAWIVFGIMTER-NLATWNTMI 327
K + +K+ EL P L ++D+ S+ G L +A V M + N+ W ++
Sbjct: 341 K-TYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLM 396
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 31/175 (17%)
Query: 55 DQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEML 114
D ++L L+ G+M+ AS +F+++ + +W+ MI G +G+ AL F++M
Sbjct: 254 DIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMR 313
Query: 115 LKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEE 174
G P+K T+ V+ AC+ + G+ TY F + G
Sbjct: 314 EFGVRPNKITFVGVLSACVHGGLVEEGK--------------TYFAMMKSEFELEPGLSH 359
Query: 175 DGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK-NVVSWTAMIDG 228
GC ++ L G++ A++V +EMP K NV+ W ++ G
Sbjct: 360 YGC----------------IVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGG 398
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 218/460 (47%), Gaps = 75/460 (16%)
Query: 31 LENCCNFKQLKQVHGRIIRSGLTHDQVLLRKL---LQHSCAYGKMNYASLVFDQINAP-D 86
+ C + + KQ+ ++I L D +++ K+ L S + +Y+S++ I +
Sbjct: 13 ISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFA--SYSSVILHSIRSVLS 70
Query: 87 SFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHA 146
SF++N ++ + P + +K + GF+PD FT+P V KAC + G+ +H
Sbjct: 71 SFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHG 130
Query: 147 LAIKM-------------RFWG------------------DTYVQNTMMNFYFKCGNEED 175
+ KM F+G D ++ + + G ++
Sbjct: 131 IVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKE 190
Query: 176 GCKVFDKMR------------------GC---------------SVVSWTT---LIAGLI 199
F KM GC S++S T LI +
Sbjct: 191 ALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYV 250
Query: 200 ACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN-VRPNEFTLV 258
C ++ A VF E+ K+ VSW +MI G V C+R EA DLF MQ + ++P+ L
Sbjct: 251 KCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILT 310
Query: 259 SLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER 318
S++SAC +G++ G+W+H+Y + GI+ +GTA++DMY+KCG ++ A +F + +
Sbjct: 311 SVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSK 370
Query: 319 NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYF 378
N+ TWN ++ L +HG E+L F+EM K P+ VTF+ L+AC H V+EG RYF
Sbjct: 371 NVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYF 430
Query: 379 SLM-TEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAM 417
M + Y + P LEHY CM++L LDE +AM
Sbjct: 431 HKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAM 470
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 138/411 (33%), Positives = 203/411 (49%), Gaps = 10/411 (2%)
Query: 4 SCCNPDANVPHFNTPTTRFDSQQALVTLENCCNF---KQLKQVHGRIIRSGLTHDQVLLR 60
SC + DA P + + L L C +F +QVHG +IR G D +
Sbjct: 118 SCYSSDAARPDSISISC------VLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGN 171
Query: 61 KLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLL-KGFA 119
++ + + A VFD+++ D +WN MI G + SGS E ++K ML F
Sbjct: 172 GMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFK 231
Query: 120 PDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKV 179
P+ T V +AC S+ FG VH I+ D + N ++ FY KCG+ + +
Sbjct: 232 PNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARAL 291
Query: 180 FDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAF 239
FD+M V++ +I+G +A G V A +F EM S + +W AMI G ++ E
Sbjct: 292 FDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVI 351
Query: 240 DLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMY 299
+ F M RPN TL SL+ + T +LK GK IH +AI+NG + ++ T++ID Y
Sbjct: 352 NSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNY 411
Query: 300 SKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFV 359
+K G L A VF +R+L W +IT+ VHG S+ A LF +M+ PD VT
Sbjct: 412 AKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLT 471
Query: 360 GVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEV 410
VLSA H D + + F M Y I P +EHY CMV + + +L +
Sbjct: 472 AVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDA 522
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 142/315 (45%), Gaps = 39/315 (12%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSG 101
Q+H RI+ + D L KL+ + A VFD+I ++F++N ++ T
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 102 SPEHALVLFKEML------LKGFAPDKFTYPFVIKACIASNAFDFG---RAVHALAIKMR 152
A LF + PD + V+KA + F G R VH I+
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 153 FWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFD 212
F D +V N M+ +Y KC N E KVFD+M VVSW ++I+G G + ++++
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYK 222
Query: 213 EMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKL 272
M + + +PN T++S+ AC + L
Sbjct: 223 AM------------------------------LACSDFKPNGVTVISVFQACGQSSDLIF 252
Query: 273 GKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGV 332
G +H I+N I++ L A+I Y+KCGSLD A +F M+E++ T+ +I+
Sbjct: 253 GLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMA 312
Query: 333 HGLSEEALDLFKEME 347
HGL +EA+ LF EME
Sbjct: 313 HGLVKEAMALFSEME 327
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 13/196 (6%)
Query: 203 KVDRARE---VFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEG------MQIENVRPN 253
+ DR R+ VFDE+ +N S+ A++ Y + +AF LF + RP+
Sbjct: 69 RQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPD 128
Query: 254 EFTL---VSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWI 310
++ + +S C + L + +H + I+ G + F+G +I Y+KC +++ A
Sbjct: 129 SISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARK 188
Query: 311 VFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEK-ANVVPDAVTFVGVLSACVHMH 369
VF M+ER++ +WN+MI+ G E+ ++K M ++ P+ VT + V AC
Sbjct: 189 VFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSS 248
Query: 370 DVEEGERYFSLMTEHY 385
D+ G M E++
Sbjct: 249 DLIFGLEVHKKMIENH 264
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 136/460 (29%), Positives = 215/460 (46%), Gaps = 74/460 (16%)
Query: 25 QQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA 84
Q+ + L +C + ++ ++HG ++++GL D + KLL S + YAS +F+ ++
Sbjct: 29 QKLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSSVL-DIRYASSIFEHVSN 87
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAV 144
+ F +N MIRG ++S PE A +F ++ KG D+F++ +K+C G +
Sbjct: 88 TNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGL 147
Query: 145 HALAIKMRFWGDTYVQN--------------------------------TMMNFYFKCGN 172
H +A++ F T ++N T+MN Y +
Sbjct: 148 HGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSK 207
Query: 173 EEDGCKVFDKMRGCSVVSWTT-----------------------------------LIAG 197
+ +F MR VV + LI
Sbjct: 208 KALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITA 267
Query: 198 LIA----CGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPN 253
LI G + AR +FD K+VV+W MID Y K E L M+ E ++PN
Sbjct: 268 LIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPN 327
Query: 254 EFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFG 313
T V L+S+C + +G+ + D + I L LGTAL+DMY+K G L+ A +F
Sbjct: 328 SSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFN 387
Query: 314 IMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKAN--VVPDAVTFVGVLSACVHMHDV 371
M ++++ +W MI+ G HGL+ EA+ LF +ME+ N V P+ +TF+ VL+AC H V
Sbjct: 388 RMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLV 447
Query: 372 EEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVY 411
EG R F M E Y +P +EHY C+V+L +L+E Y
Sbjct: 448 MEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAY 487
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 183/344 (53%), Gaps = 4/344 (1%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVI 129
G + A +FDQI D +W MI GC + ALV + EML G P + ++
Sbjct: 253 GLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLL 312
Query: 130 KACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV 189
A S G +H +K F ++Q T+++FY + + + F+ +
Sbjct: 313 SASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIA 372
Query: 190 SWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGM-QIE 248
S LIAG + G V++AREVFD+ K++ SW AMI GY + P A LF M
Sbjct: 373 SRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSS 432
Query: 249 NVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDA 308
V+P+ T+VS+ SA + +GSL+ GK HDY + I L A+IDMY+KCGS++ A
Sbjct: 433 QVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETA 492
Query: 309 WIVF---GIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSAC 365
+F ++ ++ WN +I HG ++ ALDL+ +++ + P+++TFVGVLSAC
Sbjct: 493 LNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSAC 552
Query: 366 VHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDE 409
H VE G+ YF M +GI P ++HY CMV+L L+E
Sbjct: 553 CHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEE 596
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 193/438 (44%), Gaps = 67/438 (15%)
Query: 6 CNPDANVPHFNTPTTRFDSQQALVT-LENCCNFKQL---KQVHGRIIRSGLTHDQVLLRK 61
C + HF+ D+++ALV+ L +C + + +Q+H R+++SGL + +
Sbjct: 22 CFSAPSRTHFDFSGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNS 81
Query: 62 LLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEM-------- 113
+L + A VF DS ++N+M+ G S AL LF M
Sbjct: 82 VLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSY 141
Query: 114 --LLKGFAP---------------------DKFTYPFVIKACIASNAFDFGRAVHALAIK 150
L+KG+A ++ T VI AC R + +LAIK
Sbjct: 142 TTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIK 201
Query: 151 MRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREV 210
++ G +V +++ Y C +D K+FD+M ++V+W ++ G G +++A E+
Sbjct: 202 LKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEEL 261
Query: 211 FDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSL 270
FD++ K++VSW MIDG ++ + EA + M ++P+E +V L+SA
Sbjct: 262 FDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGS 321
Query: 271 KLGKWIHDYAIKNGIELGPFLGTALIDMYS------------------------------ 300
G +H +K G + FL +I Y+
Sbjct: 322 SKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGF 381
Query: 301 -KCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEM-EKANVVPDAVTF 358
K G ++ A VF ++++ +WN MI+ + AL LF+EM + V PDA+T
Sbjct: 382 VKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITM 441
Query: 359 VGVLSACVHMHDVEEGER 376
V V SA + +EEG+R
Sbjct: 442 VSVFSAISSLGSLEEGKR 459
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 142/278 (51%), Gaps = 8/278 (2%)
Query: 129 IKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSV 188
+ +C +SN GR +H +K + Y+ N+++N Y KC D VF
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 189 VSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE 248
S+ ++ G + ++ A ++FD MP ++ VS+T +I GY + + EA +LF M+
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 249 NVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDA 308
+ NE TL +++SAC+ +G + + + AIK +E F+ T L+ MY C L DA
Sbjct: 168 GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDA 227
Query: 309 WIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHM 368
+F M ERNL TWN M+ GL E+A +LF ++ + D V++ ++ C+
Sbjct: 228 RKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITE----KDIVSWGTMIDGCLRK 283
Query: 369 HDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSE 406
+ ++E Y++ M G+ P V MV+L + +
Sbjct: 284 NQLDEALVYYTEMLR-CGMKP---SEVMMVDLLSASAR 317
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 146/457 (31%), Positives = 222/457 (48%), Gaps = 61/457 (13%)
Query: 17 TPTTRFDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYAS 76
+P+T + + L + C + + LKQ+H +II GL+H L KLL H + ++YA
Sbjct: 3 SPSTS-KNHRCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLL-HLSSTVCLSYAL 60
Query: 77 LVFDQINAPDSFTWNVMIRGCTL---SGSPEHALVLFKEMLLKG---FAPDKFTYPFVIK 130
+ QI P F +N +I S A L+ ++L P++FTYP + K
Sbjct: 61 SILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFK 120
Query: 131 ACIASNAFD-----FGRAVHALAIKM--RFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM 183
A + FD GRA+HA +K D +VQ ++ FY CG
Sbjct: 121 A----SGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCG------------ 164
Query: 184 RGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQR---PVEAFD 240
K+ AR +F+ + ++ +W ++ Y + E
Sbjct: 165 -------------------KLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLL 205
Query: 241 LFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYS 300
LF MQ VRPNE +LV+L+ +C +G G W H Y +KN + L F+GT+LID+YS
Sbjct: 206 LFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYS 262
Query: 301 KCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVG 360
KCG L A VF M++R+++ +N MI L VHG +E ++L+K + +VPD+ TFV
Sbjct: 263 KCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVV 322
Query: 361 VLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAM-SL 419
+SAC H V+EG + F+ M YGI P +EHY C+V+L L+E +EE + +
Sbjct: 323 TISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEE---AEECIKKM 379
Query: 420 SMKTNQNVVELLQESKLTSVD-DIKEVINKHYGDLNF 455
+K N + S T D + E+ KH L F
Sbjct: 380 PVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEF 416
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 215/435 (49%), Gaps = 44/435 (10%)
Query: 28 LVTLENCC----NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQIN 83
L+TL + C N + + VHG +IR G ++D L+ LL A +F I
Sbjct: 166 LITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIA 225
Query: 84 APDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRA 143
D +W+ +I +G+ AL++F +M+ G P+ T V++AC A++ + GR
Sbjct: 226 EKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRK 285
Query: 144 VHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGK 203
H LAI+ + V +++ Y KC + E+
Sbjct: 286 THELAIRKGLETEVKVSTALVDMYMKCFSPEE---------------------------- 317
Query: 204 VDRAREVFDEMPSKNVVSWTAMIDGYV---KCQRPVEAFDLFEGMQIEN-VRPNEFTLVS 259
A VF +P K+VVSW A+I G+ R +E F + M +EN RP+ +V
Sbjct: 318 ---AYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSI---MLLENNTRPDAILMVK 371
Query: 260 LVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERN 319
++ +C+E+G L+ K H Y IK G + PF+G +L+++YS+CGSL +A VF + ++
Sbjct: 372 VLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKD 431
Query: 320 LATWNTMITSLGVHGLSEEALDLFKEMEKAN-VVPDAVTFVGVLSACVHMHDVEEGERYF 378
W ++IT G+HG +AL+ F M K++ V P+ VTF+ +LSAC H + EG R F
Sbjct: 432 TVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIF 491
Query: 379 SLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNVVELLQESKLTS 438
LM Y ++P LEHY +V+L +LD + M S T Q + LL ++
Sbjct: 492 KLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFS-PTPQILGTLLGACRIHQ 550
Query: 439 VDDIKEVINKHYGDL 453
++ E + K +L
Sbjct: 551 NGEMAETVAKKLFEL 565
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 160/340 (47%), Gaps = 34/340 (10%)
Query: 75 ASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIA 134
A +F ++ + WN +++ + E L F M PD FT P +KAC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 135 SNAFDFGRAVHALAIK-MRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTT 193
++G +H K + D YV ++++ Y KC
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKC----------------------- 109
Query: 194 LIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQI-ENVRP 252
G++ A +FDE+ ++V+W++M+ G+ K P +A + F M + +V P
Sbjct: 110 --------GRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTP 161
Query: 253 NEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVF 312
+ TL++LVSACT++ + +LG+ +H + I+ G L +L++ Y+K + +A +F
Sbjct: 162 DRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLF 221
Query: 313 GIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVE 372
++ E+++ +W+T+I +G + EAL +F +M P+ T + VL AC HD+E
Sbjct: 222 KMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLE 281
Query: 373 EGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYT 412
+G + L G+ ++ +V++Y +E Y
Sbjct: 282 QGRKTHELAIRK-GLETEVKVSTALVDMYMKCFSPEEAYA 320
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 135/418 (32%), Positives = 203/418 (48%), Gaps = 35/418 (8%)
Query: 39 QLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCT 98
Q K HG +++SG+ L+ LL G ++ A VF++ + D W MI G T
Sbjct: 260 QGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYT 319
Query: 99 LSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTY 158
+GS AL LF++M P+ T V+ C + GR+VH L+IK+ W DT
Sbjct: 320 HNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTN 378
Query: 159 VQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKN 218
V N +++ Y KC D A+ VF+ K+
Sbjct: 379 VANALVHMYAKCYQNRD-------------------------------AKYVFEMESEKD 407
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
+V+W ++I G+ + EA LF M E+V PN T+ SL SAC +GSL +G +H
Sbjct: 408 IVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHA 467
Query: 279 YAIKNGIELGP--FLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLS 336
Y++K G +GTAL+D Y+KCG A ++F + E+N TW+ MI G G +
Sbjct: 468 YSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDT 527
Query: 337 EEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVC 396
+L+LF+EM K P+ TF +LSAC H V EG++YFS M + Y +P +HY C
Sbjct: 528 IGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTC 587
Query: 397 MVELYTGDSELDEVYTSEEAMSLSMKTNQNVVELLQESKLTSVDDIKEVINKHYGDLN 454
MV++ EL++ E M + + L + S D+ E++ K DL+
Sbjct: 588 MVDMLARAGELEQALDIIEKMPIQPDV-RCFGAFLHGCGMHSRFDLGEIVIKKMLDLH 644
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 171/357 (47%), Gaps = 32/357 (8%)
Query: 24 SQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQIN 83
S + L C N L+Q HG + +GL D + KL+ +G A LVFDQI
Sbjct: 44 SSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIP 103
Query: 84 APDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRA 143
PD + W VM+R L+ + L+ ++ GF D + +KAC D G+
Sbjct: 104 EPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKK 163
Query: 144 VHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGK 203
+H +K+ + D V +++ Y KCG +
Sbjct: 164 IHCQLVKVPSF-DNVVLTGLLDMYAKCG-------------------------------E 191
Query: 204 VDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSA 263
+ A +VF+++ +NVV WT+MI GYVK E LF M+ NV NE+T +L+ A
Sbjct: 192 IKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMA 251
Query: 264 CTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATW 323
CT++ +L GKW H +K+GIEL L T+L+DMY KCG + +A VF + +L W
Sbjct: 252 CTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMW 311
Query: 324 NTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSL 380
MI +G EAL LF++M+ + P+ VT VLS C + ++E G L
Sbjct: 312 TAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGL 368
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 144/333 (43%), Gaps = 40/333 (12%)
Query: 36 NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIR 95
N + + VHG I+ G+ V + ++ Y + A VF+ + D WN +I
Sbjct: 358 NLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRD-AKYVFEMESEKDIVAWNSIIS 416
Query: 96 GCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWG 155
G + +GS AL LF M + P+ T + AC + + G ++HA ++K+ F
Sbjct: 417 GFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLA 476
Query: 156 DT--YVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDE 213
+ +V +++FY KCG+ + +FD + + ++W+ +I G
Sbjct: 477 SSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGG---------------- 520
Query: 214 MPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG 273
Y K + + +LFE M + +PNE T S++SAC G + G
Sbjct: 521 ---------------YGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEG 565
Query: 274 KWIHDYAIKNGIELGPFLG--TALIDMYSKCGSLDDAW-IVFGIMTERNLATWNTMITSL 330
K K+ P T ++DM ++ G L+ A I+ + + ++ + +
Sbjct: 566 KKYFSSMYKD-YNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGC 624
Query: 331 GVHGLSEEALDLFKEMEKANVVPDAVTFVGVLS 363
G+H + + K+M ++ PD ++ ++S
Sbjct: 625 GMHSRFDLGEIVIKKM--LDLHPDDASYYVLVS 655
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/369 (31%), Positives = 191/369 (51%), Gaps = 31/369 (8%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+Q+H I++GL L L+ +N A +FD +S TW+ M+ G + +
Sbjct: 241 RQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQN 300
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G A+ LF M G P ++T V+ AC + G+ +H+ +K+ F +
Sbjct: 301 GESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFAT 360
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
+++ Y K G D AR+ FD + ++V
Sbjct: 361 TALVDMYAKAGCLAD-------------------------------ARKGFDCLQERDVA 389
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
WT++I GYV+ EA L+ M+ + PN+ T+ S++ AC+ + +L+LGK +H +
Sbjct: 390 LWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHT 449
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEAL 340
IK+G L +G+AL MYSKCGSL+D +VF +++ +WN MI+ L +G +EAL
Sbjct: 450 IKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEAL 509
Query: 341 DLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVEL 400
+LF+EM + PD VTFV ++SAC H VE G YF++M++ G+ P ++HY CMV+L
Sbjct: 510 ELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDL 569
Query: 401 YTGDSELDE 409
+ +L E
Sbjct: 570 LSRAGQLKE 578
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 179/376 (47%), Gaps = 47/376 (12%)
Query: 36 NFKQLKQVHGRIIRSG----LTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWN 91
N + VHG+IIR+G + H VL+ C GK+ A +F+ I D +WN
Sbjct: 29 NLVAGRAVHGQIIRTGASTCIQHANVLVN--FYAKC--GKLAKAHSIFNAIICKDVVSWN 84
Query: 92 VMIRGCTLSG---SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALA 148
+I G + +G S + LF+EM + P+ +T + KA + + GR HAL
Sbjct: 85 SLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALV 144
Query: 149 IKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAR 208
+KM +GD YV +++ Y K G EDG KV
Sbjct: 145 VKMSSFGDIYVDTSLVGMYCKAGLVEDGLKV----------------------------- 175
Query: 209 EVFDEMPSKNVVSWTAMIDGYV---KCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACT 265
F MP +N +W+ M+ GY + + ++ F+LF + E +++ +++S+
Sbjct: 176 --FAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFL-REKEEGSDSDYVFTAVLSSLA 232
Query: 266 EMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNT 325
+ LG+ IH IKNG+ L AL+ MYSKC SL++A +F +RN TW+
Sbjct: 233 ATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSA 292
Query: 326 MITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHY 385
M+T +G S EA+ LF M A + P T VGVL+AC + +EEG++ S + +
Sbjct: 293 MVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK-L 351
Query: 386 GISPILEHYVCMVELY 401
G L +V++Y
Sbjct: 352 GFERHLFATTALVDMY 367
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 149/350 (42%), Gaps = 45/350 (12%)
Query: 33 NCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNV 92
+ C ++ KQ+H +++ G L+ G + A FD + D W
Sbjct: 334 DICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTS 393
Query: 93 MIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMR 152
+I G + E AL+L++ M G P+ T V+KAC + + G+ VH IK
Sbjct: 394 LISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHG 453
Query: 153 FWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFD 212
F + + + + Y KCG+ EDG VF + VVSW +I+GL G+ D A E+F+
Sbjct: 454 FGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFE 513
Query: 213 EMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKL 272
EM L EGM+ P++ T V+++SAC+ G ++
Sbjct: 514 EM--------------------------LAEGME-----PDDVTFVNIISACSHKGFVER 542
Query: 273 GKWIHDYAIKNGIELGPFLG--TALIDMYSKCGSLDDAW-IVFGIMTERNLATWNTMITS 329
G W + + + I L P + ++D+ S+ G L +A + + L W ++++
Sbjct: 543 G-WFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSA 601
Query: 330 LGVHGLSE------EALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEE 373
HG E E L E + V G+ +A M DVE
Sbjct: 602 CKNHGKCELGVYAGEKLMALGSRESSTYVQ----LSGIYTALGRMRDVER 647
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
Query: 250 VRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAW 309
+ P+ TL+ ++ ++ +L G+ +H I+ G L++ Y+KCG L A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 310 IVFGIMTERNLATWNTMITSLGVHG---LSEEALDLFKEMEKANVVPDAVTFVGVLSACV 366
+F + +++ +WN++IT +G S + LF+EM +++P+A T G+ A
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
Query: 367 HMHDVEEGERYFSLMTE 383
+ G + +L+ +
Sbjct: 130 SLQSSTVGRQAHALVVK 146
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 180/343 (52%), Gaps = 3/343 (0%)
Query: 89 TWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALA 148
+N MI G G + AL + + M+ G D+FTYP VI+AC + G+ VHA
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
Query: 149 IKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAR 208
++ + + N++++ Y+KCG ++ +F+KM +VSW L++G ++ G + A+
Sbjct: 313 LRREDF-SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAK 371
Query: 209 EVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMG 268
+F EM KN++SW MI G + E LF M+ E P ++ + +C +G
Sbjct: 372 LIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLG 431
Query: 269 SLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMIT 328
+ G+ H +K G + G ALI MY+KCG +++A VF M + +WN +I
Sbjct: 432 AYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIA 491
Query: 329 SLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGIS 388
+LG HG EA+D+++EM K + PD +T + VL+AC H V++G +YF M Y I
Sbjct: 492 ALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIP 551
Query: 389 PILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNVVELL 431
P +HY +++L + + + E SL K + E L
Sbjct: 552 PGADHYARLIDLLCRSGKFSDAESVIE--SLPFKPTAEIWEAL 592
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 179/389 (46%), Gaps = 47/389 (12%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFT----------- 89
+ VHG II G +L +L+ C ++NYA +FD+I+ PD
Sbjct: 34 RAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCAS 93
Query: 90 ----------------------WNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPF 127
+N MI G + + A+ LF +M +GF PD FT+
Sbjct: 94 GDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFAS 153
Query: 128 VIKACIASNAFDFGRAV--HALAIKMRFWGDTYVQNTMMNFYFKCGNE----EDGCKVFD 181
V+ A +A A D + V HA A+K T V N +++ Y KC + KVFD
Sbjct: 154 VL-AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFD 212
Query: 182 KMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK-NVVSWTAMIDGYVKCQRPVEAFD 240
++ SWTT++ G + G D E+ + M +V++ AMI GYV EA +
Sbjct: 213 EILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALE 272
Query: 241 LFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYS 300
+ M + +EFT S++ AC G L+LGK +H Y ++ + +L+ +Y
Sbjct: 273 MVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYY 331
Query: 301 KCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVG 360
KCG D+A +F M ++L +WN +++ G EA +FKEM++ N+ ++++
Sbjct: 332 KCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI----LSWMI 387
Query: 361 VLSACVHMHDVEEGERYFSLMTEHYGISP 389
++S EEG + FS M G P
Sbjct: 388 MISGLAENGFGEEGLKLFSCMKRE-GFEP 415
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 129/316 (40%), Gaps = 38/316 (12%)
Query: 22 FDSQQALVTLE-NCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFD 80
F +LV+L C F + + + ++ D V LL + G + A L+F
Sbjct: 320 FHFDNSLVSLYYKCGKFDEARAIFEKMP----AKDLVSWNALLSGYVSSGHIGEAKLIFK 375
Query: 81 QINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDF 140
++ + +W +MI G +G E L LF M +GF P + + IK+C A+
Sbjct: 376 EMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCN 435
Query: 141 GRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIA 200
G+ HA +K+ F N ++ Y KCG E+ +VF M VSW LIA L
Sbjct: 436 GQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQ 495
Query: 201 CGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSL 260
G A +V++EM K +RP+ TL+++
Sbjct: 496 HGHGAEAVDVYEEMLKK-------------------------------GIRPDRITLLTV 524
Query: 261 VSACTEMGSLKLG-KWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERN 319
++AC+ G + G K+ I G LID+ + G DA V + +
Sbjct: 525 LTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKP 584
Query: 320 LA-TWNTMITSLGVHG 334
A W +++ VHG
Sbjct: 585 TAEIWEALLSGCRVHG 600
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 140/334 (41%), Gaps = 43/334 (12%)
Query: 125 YPFVIKACIA--SNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDK 182
Y ++ C+ + RAVH I F ++ N +++ Y K ++FD+
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 183 MRGCSVVSWTTLIAGLIACGKVDRAREVFDEMP--SKNVVSWTAMIDGYVKCQRPVEAFD 240
+ ++ TT+++G A G + AR VF++ P ++ V + AMI G+ A +
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 241 LFEGMQIENVRPNEFTLVSLVSACTEMG-SLKLGKWIHDYAIKNGIELGPFLGTALIDMY 299
LF M+ E +P+ FT S+++ + K H A+K+G + AL+ +Y
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVY 194
Query: 300 SKCGS----LDDAWIVFGIMTERNLATWNTMITS--------LGV--------------- 332
SKC S L A VF + E++ +W TM+T LG
Sbjct: 195 SKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAY 254
Query: 333 ---------HGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTE 383
G +EAL++ + M + + D T+ V+ AC ++ G++ + +
Sbjct: 255 NAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR 314
Query: 384 HYGISPILEHYVCMVELYTGDSELDEVYTSEEAM 417
S ++ +V LY + DE E M
Sbjct: 315 REDFSFHFDN--SLVSLYYKCGKFDEARAIFEKM 346
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 129/391 (32%), Positives = 208/391 (53%), Gaps = 23/391 (5%)
Query: 29 VTLENCCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAP 85
+ L+ C +K Q+HG + ++GL D L L+ G + + +FD++
Sbjct: 126 LVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKR 185
Query: 86 DSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAF--DFGRA 143
DS ++N MI G G A LF M P +K I+ N+ + +
Sbjct: 186 DSVSYNSMIDGYVKCGLIVSARELFDLM------------PMEMKNLISWNSMISGYAQT 233
Query: 144 VHALAIKMRFWGDTYVQ-----NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGL 198
+ I + + D + N+M++ Y K G ED +FD M VV+W T+I G
Sbjct: 234 SDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGY 293
Query: 199 IACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE-NVRPNEFTL 257
G V A+ +FD+MP ++VV++ +M+ GYV+ + +EA ++F M+ E ++ P++ TL
Sbjct: 294 AKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTL 353
Query: 258 VSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTE 317
V ++ A ++G L +H Y ++ LG LG ALIDMYSKCGS+ A +VF +
Sbjct: 354 VIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIEN 413
Query: 318 RNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERY 377
+++ WN MI L +HGL E A D+ ++E+ ++ PD +TFVGVL+AC H V+EG
Sbjct: 414 KSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLC 473
Query: 378 FSLMTEHYGISPILEHYVCMVELYTGDSELD 408
F LM + I P L+HY CMV++ + ++
Sbjct: 474 FELMRRKHKIEPRLQHYGCMVDILSRSGSIE 504
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 172/356 (48%), Gaps = 27/356 (7%)
Query: 30 TLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQH-------------SCAYGKMNYAS 76
L +C + Q+HGR+I++G+ + L +++ C + + + S
Sbjct: 18 VLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCS 77
Query: 77 LVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASN 136
F ++ P F WN +I+ + P AL+L ML G + DKF+ V+KAC
Sbjct: 78 FSFGEVEDP--FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLG 135
Query: 137 AFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIA 196
G +H K W D ++QN ++ Y KCG ++FD+M VS+ ++I
Sbjct: 136 FVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMID 195
Query: 197 GLIACGKVDRAREVFDEMP--SKNVVSWTAMIDGYVKCQRPVE-AFDLFEGMQIENVRPN 253
G + CG + ARE+FD MP KN++SW +MI GY + V+ A LF M +++
Sbjct: 196 GYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDL--- 252
Query: 254 EFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFG 313
+ S++ + G ++ K + D + + +ID Y+K G + A +F
Sbjct: 253 -ISWNSMIDGYVKHGRIEDAKGLFDVMPRRDV----VTWATMIDGYAKLGFVHHAKTLFD 307
Query: 314 IMTERNLATWNTMITSLGVHGLSEEALDLFKEMEK-ANVVPDAVTFVGVLSACVHM 368
M R++ +N+M+ + EAL++F +MEK ++++PD T V VL A +
Sbjct: 308 QMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQL 363
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 213/443 (48%), Gaps = 72/443 (16%)
Query: 38 KQLKQVHGRIIRSG-LTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRG 96
+ + Q+H +I +G L + + R L+ G+++YA VFD++ +N MI
Sbjct: 31 RHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVV 90
Query: 97 CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGD 156
+ +P+ L L+ +M+ + PD T+ IKAC++ + G AV A+ + D
Sbjct: 91 YSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKND 150
Query: 157 TYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPS 216
+V ++++N Y KCG ++ +F KM V+ WTT++ G GK +A E + EM +
Sbjct: 151 VFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQN 210
Query: 217 K---------------------------------------NVVSWTAMIDGYVK------ 231
+ NVV T+++D Y K
Sbjct: 211 EGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEV 270
Query: 232 -----------------------CQRPV--EAFDLFEGMQIENVRPNEFTLVSLVSACTE 266
Q + +AF+ MQ +P+ TLV ++ AC++
Sbjct: 271 ASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQ 330
Query: 267 MGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTM 326
+GSLK G+ +H Y +K + L TAL+DMYSKCG+L + +F + ++L WNTM
Sbjct: 331 VGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTM 389
Query: 327 ITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYG 386
I+ G+HG +E + LF +M ++N+ PD TF +LSA H VE+G+ +FS+M Y
Sbjct: 390 ISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYK 449
Query: 387 ISPILEHYVCMVELYTGDSELDE 409
I P +HYVC+++L ++E
Sbjct: 450 IQPSEKHYVCLIDLLARAGRVEE 472
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/439 (29%), Positives = 208/439 (47%), Gaps = 42/439 (9%)
Query: 20 TRFDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVF 79
TR L N ++ KQ H I +G+ D +L LL C G + YA +VF
Sbjct: 273 TRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVF 332
Query: 80 DQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFD 139
D++ D TWN++I G G E A+ + + M L+ D T ++ A +
Sbjct: 333 DRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLK 392
Query: 140 FGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFD------------------ 181
G+ V I+ F D + +T+M+ Y KCG+ D KVFD
Sbjct: 393 LGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYA 452
Query: 182 ---------------KMRGC--SVVSWTTLIAGLIACGKVDRAREVFDEMPSK----NVV 220
++ G +V++W +I L+ G+VD A+++F +M S N++
Sbjct: 453 ESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLI 512
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
SWT M++G V+ EA MQ +RPN F++ +SAC + SL +G+ IH Y
Sbjct: 513 SWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYI 572
Query: 281 IKNGIELGPFLG--TALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEE 338
I+N ++ + T+L+DMY+KCG ++ A VFG L N MI++ ++G +E
Sbjct: 573 IRN-LQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKE 631
Query: 339 ALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMV 398
A+ L++ +E + PD +T VLSAC H D+ + F+ + + P LEHY MV
Sbjct: 632 AIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMV 691
Query: 399 ELYTGDSELDEVYTSEEAM 417
+L E ++ E M
Sbjct: 692 DLLASAGETEKALRLIEEM 710
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 175/358 (48%), Gaps = 32/358 (8%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+ VHG +++SGL + L G ++ AS VFD+I ++ WN ++ G +
Sbjct: 193 RGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQN 252
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G E A+ LF +M +G P + T + A + G+ HA+AI D +
Sbjct: 253 GKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILG 312
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
+++NFY CKV G ++ A VFD M K+VV
Sbjct: 313 TSLLNFY---------CKV----------------------GLIEYAEMVFDRMFEKDVV 341
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
+W +I GYV+ +A + + M++E ++ + TL +L+SA +LKLGK + Y
Sbjct: 342 TWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYC 401
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEAL 340
I++ E L + ++DMY+KCGS+ DA VF E++L WNT++ + GLS EAL
Sbjct: 402 IRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEAL 461
Query: 341 DLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMV 398
LF M+ V P+ +T+ ++ + + V+E + F L + GI P L + M+
Sbjct: 462 RLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF-LQMQSSGIIPNLISWTTMM 518
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 166/350 (47%), Gaps = 36/350 (10%)
Query: 31 LENCCNFKQL---KQVHGRIIRSG--LTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAP 85
L+ C + L KQ+H RI+++G ++ + KL+ + A ++F ++
Sbjct: 77 LQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVR 136
Query: 86 DSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVH 145
+ F+W +I G E AL+ F EML PD F P V KAC A FGR VH
Sbjct: 137 NVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVH 196
Query: 146 ALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVD 205
+K +V +++ + Y KCG +D KVFD++ + V+W L+ G + GK +
Sbjct: 197 GYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNE 256
Query: 206 RAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACT 265
EA LF M+ + V P T+ + +SA
Sbjct: 257 -------------------------------EAIRLFSDMRKQGVEPTRVTVSTCLSASA 285
Query: 266 EMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNT 325
MG ++ GK H AI NG+EL LGT+L++ Y K G ++ A +VF M E+++ TWN
Sbjct: 286 NMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNL 345
Query: 326 MITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGE 375
+I+ GL E+A+ + + M + D VT ++SA +++ G+
Sbjct: 346 IISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGK 395
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 138/299 (46%), Gaps = 33/299 (11%)
Query: 80 DQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFD 139
+Q ++P S ++ + +G + AL L EM + Y +++ C+
Sbjct: 28 EQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLS 87
Query: 140 FGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLI 199
G+ +HA +K GD Y +N + T L+
Sbjct: 88 TGKQIHARILKN---GDFYARNEYIE--------------------------TKLVIFYA 118
Query: 200 ACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPV--EAFDLFEGMQIENVRPNEFTL 257
C ++ A +F ++ +NV SW A+I VKC+ + A F M + P+ F +
Sbjct: 119 KCDALEIAEVLFSKLRVRNVFSWAAIIG--VKCRIGLCEGALMGFVEMLENEIFPDNFVV 176
Query: 258 VSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTE 317
++ AC + + G+ +H Y +K+G+E F+ ++L DMY KCG LDDA VF + +
Sbjct: 177 PNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPD 236
Query: 318 RNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
RN WN ++ +G +EEA+ LF +M K V P VT LSA +M VEEG++
Sbjct: 237 RNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQ 295
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 207/429 (48%), Gaps = 35/429 (8%)
Query: 23 DSQQALVTLENCCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVF 79
D+ L+ C + LK Q+H +I+ G+ D + L+ G + AS +
Sbjct: 186 DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYML 245
Query: 80 DQINAPDSFT-------------------------------WNVMIRGCTLSGSPEHALV 108
+QI PD + WN MI G + ALV
Sbjct: 246 EQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALV 305
Query: 109 LFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYF 168
LF EM + D T VI ACI + G+ +H A K D V +T+++ Y
Sbjct: 306 LFNEMRNET-REDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYS 364
Query: 169 KCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDG 228
KCG+ + CK+F ++ + ++I +CG++D A+ VF+ + +K+++SW +M +G
Sbjct: 365 KCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNG 424
Query: 229 YVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELG 288
+ + VE + F M ++ +E +L S++SAC + SL+LG+ + A G++
Sbjct: 425 FSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSD 484
Query: 289 PFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEK 348
+ ++LID+Y KCG ++ VF M + + WN+MI+ +G EA+DLFK+M
Sbjct: 485 QVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSV 544
Query: 349 ANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELD 408
A + P +TF+ VL+AC + VEEG + F M +G P EH+ CMV+L ++
Sbjct: 545 AGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVE 604
Query: 409 EVYTSEEAM 417
E E M
Sbjct: 605 EAINLVEEM 613
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 174/344 (50%), Gaps = 35/344 (10%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVI 129
G+++ A +F+ + D T N ++ G L+G E AL LFKE+ F+ D T V+
Sbjct: 138 GELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVL 194
Query: 130 KACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV 189
KAC A G+ +HA + D+ + ++++N Y KCG+ + +++R
Sbjct: 195 KACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDH 254
Query: 190 SWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN 249
S + LI+G CG+V+ +R +FD ++ V+ W +MI GY+ +EA LF M+ E
Sbjct: 255 SLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE- 313
Query: 250 VRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGS----- 304
R + TL ++++AC +G L+ GK +H +A K G+ + + L+DMYSKCGS
Sbjct: 314 TREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEAC 373
Query: 305 --------------------------LDDAWIVFGIMTERNLATWNTMITSLGVHGLSEE 338
+DDA VF + ++L +WN+M +G + E
Sbjct: 374 KLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVE 433
Query: 339 ALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMT 382
L+ F +M K ++ D V+ V+SAC + +E GE+ F+ T
Sbjct: 434 TLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARAT 477
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 127/271 (46%), Gaps = 41/271 (15%)
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
NTM+ Y G + + FD M SW +++G G++ AR +F+ MP K+VV
Sbjct: 97 NTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVV 156
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
+ +++ GY+ EA LF+ + N + TL +++ AC E+ +LK GK IH
Sbjct: 157 TLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQI 213
Query: 281 IKNGIELGPFLGTALIDMYSKCGSL-------------------------------DDAW 309
+ G+E + ++L+++Y+KCG L +++
Sbjct: 214 LIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESR 273
Query: 310 IVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMH 369
+F + R + WN+MI+ + + EAL LF EM + D+ T V++AC+ +
Sbjct: 274 GLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLG 332
Query: 370 DVEEGERY------FSLMTEHYGISPILEHY 394
+E G++ F L+ + S +L+ Y
Sbjct: 333 FLETGKQMHCHACKFGLIDDIVVASTLLDMY 363
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 5/190 (2%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+QV R GL DQV+ L+ C G + + VFD + D WN MI G +
Sbjct: 470 EQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATN 529
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAV-HALAIKMRFWGDTYV 159
G A+ LFK+M + G P + T+ V+ AC + GR + ++ + F D
Sbjct: 530 GQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEH 589
Query: 160 QNTMMNFYFKCGNEEDGCKVFDKMR-GCSVVSWTTLIAGLIACGKV---DRAREVFDEMP 215
+ M++ + G E+ + ++M W++++ G +A G +A E E+
Sbjct: 590 FSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELE 649
Query: 216 SKNVVSWTAM 225
+N V++ +
Sbjct: 650 PENSVAYVQL 659
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/350 (33%), Positives = 179/350 (51%), Gaps = 46/350 (13%)
Query: 28 LVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQH--SCAYG-KMNYASLVFDQINA 84
L LENC + +L Q+HG +I+S + + + L +L+ +C ++YA VF+ I+
Sbjct: 10 LSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDC 69
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAV 144
P + WN MIRG + S +P+ AL+ ++EML KG++PD FT+P+V+KAC FG V
Sbjct: 70 PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCV 129
Query: 145 HALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKV 204
H +K F + YV +++ Y CG G +VF+ + +VV+W +LI+G + +
Sbjct: 130 HGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRF 189
Query: 205 DRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSAC 264
A E F EM Q V+ NE +V L+ AC
Sbjct: 190 SDAIEAFREM-------------------------------QSNGVKANETIMVDLLVAC 218
Query: 265 TEMGSLKLGKWIHDYAIKNGIELGPF----------LGTALIDMYSKCGSLDDAWIVFGI 314
+ GKW H + G+ P+ L T+LIDMY+KCG L A +F
Sbjct: 219 GRCKDIVTGKWFHGFL--QGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDG 276
Query: 315 MTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSA 364
M ER L +WN++IT +G +EEAL +F +M + PD VTF+ V+ A
Sbjct: 277 MPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRA 326
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 190/402 (47%), Gaps = 29/402 (7%)
Query: 30 TLENCCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPD 86
L+ C + ++ VHG ++++G + + LL G++NY VF+ I +
Sbjct: 113 VLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWN 172
Query: 87 SFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHA 146
W +I G + A+ F+EM G ++ ++ AC G+ H
Sbjct: 173 VVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHG 232
Query: 147 LAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDR 206
+ F D Y Q+ + G +V+ T+LI CG +
Sbjct: 233 FLQGLGF--DPYFQSKV---------------------GFNVILATSLIDMYAKCGDLRT 269
Query: 207 AREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTE 266
AR +FD MP + +VSW ++I GY + EA +F M + P++ T +S++ A
Sbjct: 270 ARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMI 329
Query: 267 MGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTM 326
G +LG+ IH Y K G + AL++MY+K G + A F + +++ W +
Sbjct: 330 QGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVV 389
Query: 327 ITSLGVHGLSEEALDLFKEM-EKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHY 385
I L HG EAL +F+ M EK N PD +T++GVL AC H+ VEEG+RYF+ M + +
Sbjct: 390 IIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLH 449
Query: 386 GISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNV 427
G+ P +EHY CMV++ + +E ++ +K N N+
Sbjct: 450 GLEPTVEHYGCMVDILSRAGRFEE--AERLVKTMPVKPNVNI 489
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 1/189 (0%)
Query: 207 AREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTE 266
AR VF+ + +V W +MI GY P +A ++ M + P+ FT ++ AC+
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 267 MGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTM 326
+ ++ G +H + +K G E+ ++ T L+ MY CG ++ VF + + N+ W ++
Sbjct: 120 LRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSL 179
Query: 327 ITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYG 386
I+ + +A++ F+EM+ V + V +L AC D+ G ++F + G
Sbjct: 180 ISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTG-KWFHGFLQGLG 238
Query: 387 ISPILEHYV 395
P + V
Sbjct: 239 FDPYFQSKV 247
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 200/438 (45%), Gaps = 68/438 (15%)
Query: 10 ANVPHFNTPTTRFDSQQALVTLENCCNFKQL-------KQVHGRIIRSGLTHDQVLLRKL 62
A V +NT F + VTL KQ+HG++I+ G ++ L
Sbjct: 121 AAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPL 180
Query: 63 LQHSCAYGKMNYASLVF---DQINA---------------------------PDSFTWNV 92
L G ++ A VF D N DS +W
Sbjct: 181 LYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAA 240
Query: 93 MIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMR 152
MI+G +G + A+ F+EM ++G D++ + V+ AC A + G+ +HA I+
Sbjct: 241 MIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN 300
Query: 153 FWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFD 212
F YV + +++ Y KC C + A+ VFD
Sbjct: 301 FQDHIYVGSALIDMYCKC-----------------------------KC--LHYAKTVFD 329
Query: 213 EMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKL 272
M KNVVSWTAM+ GY + R EA +F MQ + P+ +TL +SAC + SL+
Sbjct: 330 RMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEE 389
Query: 273 GKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGV 332
G H AI +G+ + +L+ +Y KCG +DD+ +F M R+ +W M+++
Sbjct: 390 GSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQ 449
Query: 333 HGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILE 392
G + E + LF +M + + PD VT GV+SAC VE+G+RYF LMT YGI P +
Sbjct: 450 FGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIG 509
Query: 393 HYVCMVELYTGDSELDEV 410
HY CM++L++ L+E
Sbjct: 510 HYSCMIDLFSRSGRLEEA 527
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 202/410 (49%), Gaps = 46/410 (11%)
Query: 38 KQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMN-YASLVFDQINAP----------- 85
+ +K +HG IIR+ L + + L + H+ A K + YA VFD+I P
Sbjct: 23 RYVKMIHGNIIRA-LPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLA 81
Query: 86 --------------------DSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPD--KF 123
D TWNV+I G +LSG A+ + M ++ F+ + +
Sbjct: 82 YSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM-MRDFSANLTRV 140
Query: 124 TYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM 183
T ++K ++ G+ +H IK+ F V + ++ Y G D KVF +
Sbjct: 141 TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGL 200
Query: 184 RGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFE 243
+ V + +L+ GL+ACG ++ A ++F M K+ VSW AMI G + EA + F
Sbjct: 201 DDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFR 259
Query: 244 GMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCG 303
M+++ ++ +++ S++ AC +G++ GK IH I+ + ++G+ALIDMY KC
Sbjct: 260 EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 304 SLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLS 363
L A VF M ++N+ +W M+ G G +EEA+ +F +M+++ + PD T +S
Sbjct: 320 CLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAIS 379
Query: 364 ACVHMHDVEEGERYFSLMTEHYGISPILEHYV----CMVELYTGDSELDE 409
AC ++ +EEG ++ I+ L HYV +V LY ++D+
Sbjct: 380 ACANVSSLEEGSQFHG-----KAITSGLIHYVTVSNSLVTLYGKCGDIDD 424
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 153/380 (40%), Gaps = 72/380 (18%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
KQ+H IIR+ + L+ C ++YA VFD++ + +W M+ G +
Sbjct: 290 KQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQT 349
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G E A+ +F +M G PD +T I AC ++ + G H AI V
Sbjct: 350 GRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVS 409
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N+++ Y KCG+ +D + +F+EM ++ V
Sbjct: 410 NSLVTLYGKCGD-------------------------------IDDSTRLFNEMNVRDAV 438
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG-KWIHDY 279
SWTAM+ Y + R VE LF+ M ++P+ TL ++SAC+ G ++ G ++
Sbjct: 439 SWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLM 498
Query: 280 AIKNGIELGPFLG--TALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSE 337
+ GI P +G + +ID++S+ G L E
Sbjct: 499 TSEYGIV--PSIGHYSCMIDLFSRSGRL-------------------------------E 525
Query: 338 EALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCM 397
EA+ M PDA+ + +LSAC + ++E G+ + E P Y +
Sbjct: 526 EAMRFINGMP---FPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHP--AGYTLL 580
Query: 398 VELYTGDSELDEVYTSEEAM 417
+Y + D V M
Sbjct: 581 SSIYASKGKWDSVAQLRRGM 600
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 114/231 (49%), Gaps = 4/231 (1%)
Query: 125 YPFVIKACI---ASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFD 181
Y IK CI A N + + +H I+ + +T++ N +++ Y + +VFD
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 182 KMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDL 241
++ ++ SW L+ G + F+++P ++ V+W +I+GY A
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 242 FEGMQIE-NVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYS 300
+ M + + TL++++ + G + LGK IH IK G E +G+ L+ MY+
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 301 KCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANV 351
G + DA VF + +RN +N+++ L G+ E+AL LF+ MEK +V
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSV 236
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 193/374 (51%), Gaps = 33/374 (8%)
Query: 39 QLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCT 98
+ K HG+IIR L D LL L+ G + A VFD + +WN MI T
Sbjct: 79 EAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYT 138
Query: 99 LSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKAC-IASNAFDFGRAVHALAIKMRFWGDT 157
+ AL +F EM +GF +FT V+ AC + +A + + +H L++K +
Sbjct: 139 RNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALE-CKKLHCLSVKTCIDLNL 197
Query: 158 YVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK 217
YV +++ Y KCG +D A +VF+ M K
Sbjct: 198 YVGTALLDLYAKCGMIKD-------------------------------AVQVFESMQDK 226
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
+ V+W++M+ GYV+ + EA L+ Q ++ N+FTL S++ AC+ + +L GK +H
Sbjct: 227 SSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMH 286
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSE 337
K+G F+ ++ +DMY+KCGSL +++I+F + E+NL WNT+I+ H +
Sbjct: 287 AVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPK 346
Query: 338 EALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCM 397
E + LF++M++ + P+ VTF +LS C H VEEG R+F LM YG+SP + HY CM
Sbjct: 347 EVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCM 406
Query: 398 VELYTGDSELDEVY 411
V++ L E Y
Sbjct: 407 VDILGRAGLLSEAY 420
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 144/322 (44%), Gaps = 38/322 (11%)
Query: 35 CNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMI 94
C+ + K++H +++ + + + LL G + A VF+ + S TW+ M+
Sbjct: 176 CDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMV 235
Query: 95 RGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFW 154
G + + E AL+L++ ++FT VI AC A G+ +HA+ K F
Sbjct: 236 AGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFG 295
Query: 155 GDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEM 214
+ +V ++ ++ Y KCG+ + +F +++ ++ W T+I+
Sbjct: 296 SNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIIS------------------ 337
Query: 215 PSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGK 274
G+ K RP E LFE MQ + + PNE T SL+S C G ++ G+
Sbjct: 338 -------------GFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGR 384
Query: 275 WIHDYAIKNGIELGPFL--GTALIDMYSKCGSLDDAW-IVFGIMTERNLATWNTMITSLG 331
++ L P + + ++D+ + G L +A+ ++ I + + W +++ S
Sbjct: 385 RFFKL-MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCR 443
Query: 332 VHG---LSEEALDLFKEMEKAN 350
V+ L+E A + E+E N
Sbjct: 444 VYKNLELAEVAAEKLFELEPEN 465
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 214 MPSKNVVSWTAMIDGYVKCQ---RPVEAFDLFEGMQI------ENVRP----NEFTLVSL 260
+P N++ +T ++ ++C+ R L + + E V P NEF+ +L
Sbjct: 6 LPRMNILGFT--VNFLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNL 63
Query: 261 V----SACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT 316
V C G++ K H I+ +E L LI+ YSKCG ++ A VF M
Sbjct: 64 VHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGML 123
Query: 317 ERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSAC 365
ER+L +WNTMI + + EALD+F EM T VLSAC
Sbjct: 124 ERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC 172
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/355 (34%), Positives = 190/355 (53%), Gaps = 6/355 (1%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGF-APDKFTYPFV 128
G+M+ A F+Q+ D TWN MI G G AL +F +ML +PD+FT V
Sbjct: 226 GQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASV 285
Query: 129 IKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCS- 187
+ AC G+ +H+ + F V N +++ Y +CG E ++ ++ RG
Sbjct: 286 LSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQ-RGTKD 344
Query: 188 --VVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGM 245
+ +T L+ G I G +++A+ +F + ++VV+WTAMI GY + EA +LF M
Sbjct: 345 LKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404
Query: 246 QIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSL 305
RPN +TL +++S + + SL GK IH A+K+G + ALI MY+K G++
Sbjct: 405 VGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNI 464
Query: 306 DDAWIVFGIMT-ERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSA 364
A F ++ ER+ +W +MI +L HG +EEAL+LF+ M + PD +T+VGV SA
Sbjct: 465 TSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSA 524
Query: 365 CVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
C H V +G +YF +M + I P L HY CMV+L+ L E E M +
Sbjct: 525 CTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPI 579
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 158/326 (48%), Gaps = 34/326 (10%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVI 129
G M+ FDQ+ DS +W MI G G A+ + +M+ +G P +FT V+
Sbjct: 94 GDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVL 153
Query: 130 KACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV 189
+ A+ + G+ VH+ +K+ G+ V N+++N Y KCG+ VFD+M +
Sbjct: 154 ASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDIS 213
Query: 190 SWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN 249
SW +IA + G++D A F++M +++V+W +MI G+ + + A D+F M ++
Sbjct: 214 SWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDS 273
Query: 250 -VRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLD-- 306
+ P+ FTL S++SAC + L +GK IH + + G ++ + ALI MYS+CG ++
Sbjct: 274 LLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETA 333
Query: 307 ---------------------DAWIVFGIMTE----------RNLATWNTMITSLGVHGL 335
D +I G M + R++ W MI HG
Sbjct: 334 RRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGS 393
Query: 336 SEEALDLFKEMEKANVVPDAVTFVGV 361
EA++LF+ M P++ T +
Sbjct: 394 YGEAINLFRSMVGGGQRPNSYTLAAM 419
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 140/295 (47%), Gaps = 33/295 (11%)
Query: 130 KACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV 189
K+ SN + VH IK Y+ N +MN Y K G K+FD+M +
Sbjct: 22 KSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAF 81
Query: 190 SWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN 249
SW T+++ G +D E FD++P ++ VSWT MI GY + +A + M E
Sbjct: 82 SWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG 141
Query: 250 VRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKC------- 302
+ P +FTL +++++ ++ GK +H + +K G+ + +L++MY+KC
Sbjct: 142 IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201
Query: 303 ------------------------GSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEE 338
G +D A F M ER++ TWN+MI+ G
Sbjct: 202 FVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR 261
Query: 339 ALDLFKEMEKANVV-PDAVTFVGVLSACVHMHDVEEGERYFS-LMTEHYGISPIL 391
ALD+F +M + +++ PD T VLSAC ++ + G++ S ++T + IS I+
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV 316
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 140/331 (42%), Gaps = 47/331 (14%)
Query: 14 HFNTPTTRFDSQ----QALVTLENCCNFKQLKQVHGRIIRSGLTHDQVL--LRKLLQHSC 67
H + TT FD AL+++ + C + + R+I T D + LL
Sbjct: 302 HSHIVTTGFDISGIVLNALISMYSRCGGVETAR---RLIEQRGTKDLKIEGFTALLDGYI 358
Query: 68 AYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPF 127
G MN A +F + D W MI G GS A+ LF+ M+ G P+ +T
Sbjct: 359 KLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAA 418
Query: 128 VIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCS 187
++ + + G+ +H A+K V N ++ Y K GN + FD +R C
Sbjct: 419 MLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIR-CE 477
Query: 188 --VVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGM 245
VSWT++I L G + EA +LFE M
Sbjct: 478 RDTVSWTSMIIALAQHGHAE-------------------------------EALELFETM 506
Query: 246 QIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLG--TALIDMYSKCG 303
+E +RP+ T V + SACT G + G+ D +K+ ++ P L ++D++ + G
Sbjct: 507 LMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDM-MKDVDKIIPTLSHYACMVDLFGRAG 565
Query: 304 SLDDAW-IVFGIMTERNLATWNTMITSLGVH 333
L +A + + E ++ TW +++++ VH
Sbjct: 566 LLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 122/359 (33%), Positives = 179/359 (49%), Gaps = 32/359 (8%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
KQVH I+ D + L+ M A ++F++ N D WN M+ G T S
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQS 495
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
L LF M +G D FT V K C A + G+ VHA AIK + D +V
Sbjct: 496 HDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS 555
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
+ +++ Y KCG+ + A+ FD +P + V
Sbjct: 556 SGILDMYVKCGD-------------------------------MSAAQFAFDSIPVPDDV 584
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
+WT MI G ++ AF +F M++ V P+EFT+ +L A + + +L+ G+ IH A
Sbjct: 585 AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANA 644
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEAL 340
+K PF+GT+L+DMY+KCGS+DDA+ +F + N+ WN M+ L HG +E L
Sbjct: 645 LKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETL 704
Query: 341 DLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVE 399
LFK+M+ + PD VTF+GVLSAC H V E ++ M YGI P +EHY C+ +
Sbjct: 705 QLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLAD 763
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 151/337 (44%), Gaps = 33/337 (9%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+QVH ++ GL + L+ C K +A VFD ++ D +WN +I G +
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQN 394
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIA-SNAFDFGRAVHALAIKMRFWGDTYV 159
G A+ LF ++L G PD++T V+KA + + VH AIK+ D++V
Sbjct: 395 GLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFV 454
Query: 160 QNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNV 219
+++ Y + + + E+ E + ++
Sbjct: 455 STALIDAYSR--------------------------------NRCMKEAEILFERHNFDL 482
Query: 220 VSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDY 279
V+W AM+ GY + + LF M + R ++FTL ++ C + ++ GK +H Y
Sbjct: 483 VAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAY 542
Query: 280 AIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEA 339
AIK+G +L ++ + ++DMY KCG + A F + + W TMI+ +G E A
Sbjct: 543 AIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERA 602
Query: 340 LDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
+F +M V+PD T + A + +E+G +
Sbjct: 603 FHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQ 639
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 167/400 (41%), Gaps = 82/400 (20%)
Query: 28 LVTLENCCNF----KQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQIN 83
L T+ C F Q KQVH I+SG D + +L G M+ A FD I
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 84 APDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRA 143
PD W MI GC +G E A +F +M L G PD+FT + KA A + GR
Sbjct: 580 VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQ 639
Query: 144 VHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGK 203
+HA A+K+ D +V ++++ Y KCG+ +D +F ++ ++ +W ++ GL G+
Sbjct: 640 IHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGE 699
Query: 204 VDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSA 263
E LF+ M+ ++P++ T + ++SA
Sbjct: 700 -------------------------------GKETLQLFKQMKSLGIKPDKVTFIGVLSA 728
Query: 264 CTEMG----SLKLGKWIH-DYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER 318
C+ G + K + +H DY IK IE
Sbjct: 729 CSHSGLVSEAYKHMRSMHGDYGIKPEIE-------------------------------- 756
Query: 319 NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYF 378
++ + +LG GL ++A +L + M ++ A + +L+AC D E G+R
Sbjct: 757 ---HYSCLADALGRAGLVKQAENLIESM---SMEASASMYRTLLAACRVQGDTETGKRVA 810
Query: 379 SLMTEHYGISPI-LEHYVCMVELYTGDSELDEVYTSEEAM 417
+ + E + P+ YV + +Y S+ DE+ + M
Sbjct: 811 TKLLE---LEPLDSSAYVLLSNMYAAASKWDEMKLARTMM 847
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 156/367 (42%), Gaps = 43/367 (11%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
K H RI+ ++ L+ L+ G + YA VFD++ D +WN ++ S
Sbjct: 59 KCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQS 118
Query: 101 G-----SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWG 155
+ + A +LF+ + + T ++K C+ S + H A K+ G
Sbjct: 119 SECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDG 178
Query: 156 DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEM- 214
D +V ++N Y K G ++G +F++M VV W ++ + G + A ++
Sbjct: 179 DEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH 238
Query: 215 -----PSKNVVSWTAMIDG--------------------------------YVKCQRPVE 237
P++ + A I G Y+ +
Sbjct: 239 SSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSA 298
Query: 238 AFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALID 297
F M +V ++ T + +++ ++ SL LG+ +H A+K G++L + +LI+
Sbjct: 299 LLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLIN 358
Query: 298 MYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVT 357
MY K A VF M+ER+L +WN++I + +GL EA+ LF ++ + + PD T
Sbjct: 359 MYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT 418
Query: 358 FVGVLSA 364
VL A
Sbjct: 419 MTSVLKA 425
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 270 LKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITS 329
L LGK H + FL LI MYSKCGSL A VF M +R+L +WN+++ +
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 330 LG-----VHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVH 367
V ++A LF+ + + V +T +L C+H
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLH 157
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 132/400 (33%), Positives = 202/400 (50%), Gaps = 41/400 (10%)
Query: 28 LVTLENCC----NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQIN 83
+V+L + C +F + +H I+ GL + + KL+ +G++ VFD++
Sbjct: 250 VVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMY 309
Query: 84 APDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFG-- 141
D +WN +I+ L+ P A+ LF+EM L PD T + A I S D
Sbjct: 310 VRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLT--LISLASILSQLGDIRAC 367
Query: 142 RAVHALAI-KMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIA 200
R+V + K F D + N ++ Y K G
Sbjct: 368 RSVQGFTLRKGWFLEDITIGNAVVVMYAKLG----------------------------- 398
Query: 201 CGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN-VRPNEFTLVS 259
VD AR VF+ +P+ +V+SW +I GY + EA +++ M+ E + N+ T VS
Sbjct: 399 --LVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVS 456
Query: 260 LVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERN 319
++ AC++ G+L+ G +H +KNG+ L F+ T+L DMY KCG L+DA +F + N
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVN 516
Query: 320 LATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFS 379
WNT+I G HG E+A+ LFKEM V PD +TFV +LSAC H V+EG+ F
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFE 576
Query: 380 LMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
+M YGI+P L+HY CMV++Y +L+ ++MSL
Sbjct: 577 MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSL 616
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 183/412 (44%), Gaps = 72/412 (17%)
Query: 34 CCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVM 93
C N + K +H R++ S + + KL+ C G + A FD I D + WN+M
Sbjct: 64 CTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLM 123
Query: 94 IRGCTLSGSPEHALVLFKE-MLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMR 152
I G +G+ + F ML G PD T+P V+KAC D G +H LA+K
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC--RTVID-GNKIHCLALKFG 180
Query: 153 FWGDTYVQ-------------------------------NTMMNFYFKCGNEEDGCKVFD 181
F D YV N M++ Y + GN ++ + +
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN 240
Query: 182 KMRGCSVVSWTTLIAGLIACGKVDRA---------------------------------- 207
+R V+ +L++ G +R
Sbjct: 241 GLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRD 300
Query: 208 -REVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTE 266
++VFD M ++++SW ++I Y ++P+ A LF+ M++ ++P+ TL+SL S ++
Sbjct: 301 CQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQ 360
Query: 267 MGSLKLGKWIHDYAIKNGIELGPF-LGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNT 325
+G ++ + + + ++ G L +G A++ MY+K G +D A VF + ++ +WNT
Sbjct: 361 LGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNT 420
Query: 326 MITSLGVHGLSEEALDLFKEM-EKANVVPDAVTFVGVLSACVHMHDVEEGER 376
+I+ +G + EA++++ M E+ + + T+V VL AC + +G +
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK 472
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 132/309 (42%), Gaps = 37/309 (11%)
Query: 31 LENCCNFKQLKQVHGRIIRSG-LTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFT 89
L + + + V G +R G D + ++ G ++ A VF+ + D +
Sbjct: 358 LSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVIS 417
Query: 90 WNVMIRGCTLSGSPEHALVLFKEMLLKG-FAPDKFTYPFVIKACIASNAFDFGRAVHALA 148
WN +I G +G A+ ++ M +G A ++ T+ V+ AC + A G +H
Sbjct: 418 WNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL 477
Query: 149 IKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAR 208
+K + D +V ++ + Y KCG ED A
Sbjct: 478 LKNGLYLDVFVVTSLADMYGKCGRLED-------------------------------AL 506
Query: 209 EVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMG 268
+F ++P N V W +I + +A LF+ M E V+P+ T V+L+SAC+ G
Sbjct: 507 SLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSG 566
Query: 269 SLKLGKWIHDYAIKNGIELGPFLG--TALIDMYSKCGSLDDAWIVFGIMT-ERNLATWNT 325
+ G+W + ++ + P L ++DMY + G L+ A M+ + + + W
Sbjct: 567 LVDEGQWCFE-MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGA 625
Query: 326 MITSLGVHG 334
++++ VHG
Sbjct: 626 LLSACRVHG 634
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 90/186 (48%), Gaps = 12/186 (6%)
Query: 202 GKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEA---FDLFEGMQIENVRPNEFTLV 258
G V AR FD + +++V +W MI GY + E F LF M + P+ T
Sbjct: 100 GNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF--MLSSGLTPDYRTFP 157
Query: 259 SLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER 318
S++ AC ++ G IH A+K G ++ +LI +YS+ ++ +A I+F M R
Sbjct: 158 SVLKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR 214
Query: 319 NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYF 378
++ +WN MI+ G ++EAL L + D+VT V +LSAC D G
Sbjct: 215 DMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIH 270
Query: 379 SLMTEH 384
S +H
Sbjct: 271 SYSIKH 276
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 14/180 (7%)
Query: 37 FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRG 96
+Q ++HGR++++GL D ++ L G++ A +F QI +S WN +I
Sbjct: 467 LRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIAC 526
Query: 97 CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAV-------HALAI 149
G E A++LFKEML +G PD T+ ++ AC S D G+ + +
Sbjct: 527 HGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITP 586
Query: 150 KMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVS-WTTLIAGLIACGKVDRAR 208
++ +G M++ Y + G E K M S W L++ G VD +
Sbjct: 587 SLKHYG------CMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGK 640
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/424 (30%), Positives = 209/424 (49%), Gaps = 43/424 (10%)
Query: 37 FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRG 96
F + + +H ++ SG+ + KL+ GK+ A VFD++ D VMI
Sbjct: 32 FCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGA 91
Query: 97 CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFD--FGRAVHALAIKMRFW 154
C +G + +L F+EM G D F P ++KA + N D FG+ +H L +K +
Sbjct: 92 CARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKA--SRNLLDREFGKMIHCLVLKFSYE 149
Query: 155 GDTYVQNTMMNFYFKCGNEEDGCKVFD--------------------------------- 181
D ++ +++++ Y K G + KVF
Sbjct: 150 SDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDM 209
Query: 182 KMRGCS--VVSWTTLIAGLIACGKVDRAREVFDEM----PSKNVVSWTAMIDGYVKCQRP 235
K+ G V++W LI+G ++ E+ + M +VVSWT++I G V +
Sbjct: 210 KLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQN 269
Query: 236 VEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTAL 295
+AFD F+ M + PN T+++L+ ACT + +K GK IH Y++ G+E F+ +AL
Sbjct: 270 EKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSAL 329
Query: 296 IDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDA 355
+DMY KCG + +A I+F ++ T+N+MI HGL+++A++LF +ME D
Sbjct: 330 LDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDH 389
Query: 356 VTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEE 415
+TF +L+AC H + G+ F LM Y I P LEHY CMV+L +L E Y +
Sbjct: 390 LTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIK 449
Query: 416 AMSL 419
AM +
Sbjct: 450 AMRM 453
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 31/258 (12%)
Query: 124 TYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM 183
+Y +I+A F GR +HA + T + ++ FY +CG KV D
Sbjct: 18 SYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECG------KVLD-- 69
Query: 184 RGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFE 243
AR+VFDEMP +++ MI + E+ D F
Sbjct: 70 -----------------------ARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFR 106
Query: 244 GMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCG 303
M + ++ + F + SL+ A + + GK IH +K E F+ ++LIDMYSK G
Sbjct: 107 EMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFG 166
Query: 304 SLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLS 363
+ +A VF + E++L +N MI+ + ++EAL+L K+M+ + PD +T+ ++S
Sbjct: 167 EVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALIS 226
Query: 364 ACVHMHDVEEGERYFSLM 381
HM + E+ LM
Sbjct: 227 GFSHMRNEEKVSEILELM 244
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 245 MQIENVRPNEFTLVSL---VSACTEMGSLKL---GKWIHDYAIKNGIELGPFLGTALIDM 298
M+ + P+ F L+S+ V G +L G+ +H + + +GI + L+
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTF 60
Query: 299 YSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTF 358
Y +CG + DA VF M +R+++ MI + +G +E+LD F+EM K + DA
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIV 120
Query: 359 VGVLSACVHMHDVEEGERY------FSLMTEHYGISPILEHY 394
+L A ++ D E G+ FS ++ + +S +++ Y
Sbjct: 121 PSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMY 162
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/466 (28%), Positives = 207/466 (44%), Gaps = 77/466 (16%)
Query: 31 LENCCN---FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQIN---- 83
L+ C N F + +Q+HG ++R GL + + L+ GK+ + VF+ +
Sbjct: 96 LQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNL 155
Query: 84 -------------------------------APDSFTWNVMIRGCTLSGSPEHALVLFKE 112
PD TWN ++ G G + A+ + K
Sbjct: 156 SSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKR 215
Query: 113 MLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGN 172
M + G P + +++A G+A+H ++ + W D YV+ T+++ Y K G
Sbjct: 216 MQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGY 275
Query: 173 EEDGCKVFDKMRGCSVVSWTTLIAGL-IAC------------------------------ 201
VFD M ++V+W +L++GL AC
Sbjct: 276 LPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASG 335
Query: 202 ----GKVDRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPN 253
GK ++A +V +M K NVVSWTA+ G K A +F MQ E V PN
Sbjct: 336 YATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPN 395
Query: 254 EFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFG 313
T+ +L+ + L GK +H + ++ + ++ TAL+DMY K G L A +F
Sbjct: 396 AATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFW 455
Query: 314 IMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEE 373
+ ++LA+WN M+ + G EE + F M +A + PDA+TF VLS C + V+E
Sbjct: 456 GIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQE 515
Query: 374 GERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
G +YF LM YGI P +EH CMV+L LDE + + MSL
Sbjct: 516 GWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSL 561
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 179/354 (50%), Gaps = 10/354 (2%)
Query: 43 VHGRIIRSGLTHDQVLLRKLLQHSCAYGK---MNYASLVFDQINAPDSFTWNVMIRGCTL 99
+HG +I+ GL + R + YG+ + +A+ +FD++ D WN ++
Sbjct: 9 IHGGLIKRGLDNSDT--RVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLR 66
Query: 100 SGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYV 159
SG+ E A+ LF+EM G T +++ C F GR +H +++ + +
Sbjct: 67 SGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSM 126
Query: 160 QNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMP---- 215
N+++ Y + G E KVF+ M+ ++ SW ++++ G VD A + DEM
Sbjct: 127 CNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGL 186
Query: 216 SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKW 275
++V+W +++ GY +A + + MQI ++P+ ++ SL+ A E G LKLGK
Sbjct: 187 KPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKA 246
Query: 276 IHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGL 335
IH Y ++N + ++ T LIDMY K G L A +VF +M +N+ WN++++ L L
Sbjct: 247 IHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACL 306
Query: 336 SEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISP 389
++A L MEK + PDA+T+ + S + E+ M E G++P
Sbjct: 307 LKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK-GVAP 359
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 163/395 (41%), Gaps = 58/395 (14%)
Query: 36 NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA----------- 84
+ K K +HG I+R+ L +D + L+ G + YA +VFD ++A
Sbjct: 240 HLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVS 299
Query: 85 ------------------------PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAP 120
PD+ TWN + G G PE AL + +M KG AP
Sbjct: 300 GLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAP 359
Query: 121 DKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWG---DTYVQNTMMNF-----YFKCGN 172
+ ++ + C + F R + IKM+ G + +T++ G
Sbjct: 360 NVVSWTAIFSGCSKNGNF---RNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGK 416
Query: 173 EEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKC 232
E G K C T L+ G + A E+F + +K++ SW M+ GY
Sbjct: 417 EVHGF-CLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMF 475
Query: 233 QRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLG 292
R E F M + P+ T S++S C G ++ G W + +++ + P +
Sbjct: 476 GRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEG-WKYFDLMRSRYGIIPTIE 534
Query: 293 --TALIDMYSKCGSLDDAWIVFGIMTERNLAT-WNTMITSLGVHG---LSEEALDLFKEM 346
+ ++D+ + G LD+AW M+ + AT W ++S +H L+E A + +
Sbjct: 535 HCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVL 594
Query: 347 EKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLM 381
E N + ++ +++ +++ E+ ER +LM
Sbjct: 595 EPHN----SANYMMMINLYSNLNRWEDVERIRNLM 625
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 190/370 (51%), Gaps = 31/370 (8%)
Query: 40 LKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTL 99
LK++H ++ +++++ + G ++YA VF I + +WN +I G
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 473
Query: 100 SGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYV 159
S P +L +M + G PD FT ++ AC + G+ VH I+ D +V
Sbjct: 474 SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 533
Query: 160 QNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNV 219
++++ Y CG C+V + +FD M K++
Sbjct: 534 YLSVLSLYIHCGEL------------CTV-------------------QALFDAMEDKSL 562
Query: 220 VSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDY 279
VSW +I GY++ P A +F M + ++ +++ + AC+ + SL+LG+ H Y
Sbjct: 563 VSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAY 622
Query: 280 AIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEA 339
A+K+ +E F+ +LIDMY+K GS+ + VF + E++ A+WN MI G+HGL++EA
Sbjct: 623 ALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEA 682
Query: 340 LDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVE 399
+ LF+EM++ PD +TF+GVL+AC H + EG RY M +G+ P L+HY C+++
Sbjct: 683 IKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVID 742
Query: 400 LYTGDSELDE 409
+ +LD+
Sbjct: 743 MLGRAGQLDK 752
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 149/323 (46%), Gaps = 38/323 (11%)
Query: 52 LTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFK 111
L +D VL +++ G + + VFD + + + F WN +I + + + L F
Sbjct: 116 LRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFI 175
Query: 112 EML-LKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKC 170
EM+ PD FTYP VIKAC + G AVH L +K D +V N +++FY
Sbjct: 176 EMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFY--- 232
Query: 171 GNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYV 230
G G V A ++FD MP +N+VSW +MI +
Sbjct: 233 GTH----------------------------GFVTDALQLFDIMPERNLVSWNSMIRVFS 264
Query: 231 KCQRPVEAFDLFEGMQIEN----VRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIE 286
E+F L M EN P+ TLV+++ C + LGK +H +A+K ++
Sbjct: 265 DNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD 324
Query: 287 LGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEM 346
L AL+DMYSKCG + +A ++F + +N+ +WNTM+ G + D+ ++M
Sbjct: 325 KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Query: 347 EKA--NVVPDAVTFVGVLSACVH 367
+V D VT + + C H
Sbjct: 385 LAGGEDVKADEVTILNAVPVCFH 407
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 170/384 (44%), Gaps = 44/384 (11%)
Query: 43 VHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGS 102
VHG ++++GL D + L+ +G + A +FD + + +WN MIR + +G
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 103 PEHALVLFKEMLLK----GFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTY 158
E + +L EM+ + F PD T V+ C G+ VH A+K+R +
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 159 VQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKN 218
+ N +M+ Y KCG C + A+ +F +KN
Sbjct: 329 LNNALMDMYSKCG-----------------------------C--ITNAQMIFKMNNNKN 357
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQI--ENVRPNEFTLVSLVSACTEMGSLKLGKWI 276
VVSW M+ G+ FD+ M E+V+ +E T+++ V C L K +
Sbjct: 358 VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 417
Query: 277 HDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLS 336
H Y++K + A + Y+KCGSL A VF + + + +WN +I G H S
Sbjct: 418 HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALI---GGHAQS 474
Query: 337 EE---ALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEH 393
+ +LD +M+ + ++PD+ T +LSAC + + G+ + ++ + L
Sbjct: 475 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFV 533
Query: 394 YVCMVELYTGDSELDEVYTSEEAM 417
Y+ ++ LY EL V +AM
Sbjct: 534 YLSVLSLYIHCGELCTVQALFDAM 557
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 153/346 (44%), Gaps = 33/346 (9%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
K VHG ++ L + VL L+ G + A ++F N + +WN M+ G +
Sbjct: 312 KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAE 371
Query: 101 GSPEHALVLFKEMLLKG--FAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTY 158
G + ++ML G D+ T + C + + +H ++K F +
Sbjct: 372 GDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL 431
Query: 159 VQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKN 218
V N + Y KCG+ +VF +R +V SW
Sbjct: 432 VANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWN-------------------------- 465
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
A+I G+ + P + D M+I + P+ FT+ SL+SAC+++ SL+LGK +H
Sbjct: 466 -----ALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHG 520
Query: 279 YAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEE 338
+ I+N +E F+ +++ +Y CG L +F M +++L +WNT+IT +G +
Sbjct: 521 FIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDR 580
Query: 339 ALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEH 384
AL +F++M + ++ + V AC + + G + +H
Sbjct: 581 ALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKH 626
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 96/189 (50%), Gaps = 5/189 (2%)
Query: 192 TTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLF-EGMQIENV 250
T +I CG D +R VFD + SKN+ W A+I Y + + E + F E + ++
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 183
Query: 251 RPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWI 310
P+ FT ++ AC M + +G +H +K G+ F+G AL+ Y G + DA
Sbjct: 184 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 243
Query: 311 VFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKAN----VVPDAVTFVGVLSACV 366
+F IM ERNL +WN+MI +G SEE+ L EM + N +PD T V VL C
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
Query: 367 HMHDVEEGE 375
++ G+
Sbjct: 304 REREIGLGK 312
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 134/318 (42%), Gaps = 39/318 (12%)
Query: 23 DSQQALVTLENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVF 79
DS L C K L K+VHG IIR+ L D + +L G++ +F
Sbjct: 495 DSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALF 554
Query: 80 DQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFD 139
D + +WN +I G +G P+ AL +F++M+L G + V AC +
Sbjct: 555 DAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLR 614
Query: 140 FGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLI 199
GR HA A+K D ++ ++++ Y K G+ KVF+ ++ S SW +I G
Sbjct: 615 LGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGY- 673
Query: 200 ACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVS 259
I G K EA LFE MQ P++ T +
Sbjct: 674 -------------------------GIHGLAK-----EAIKLFEEMQRTGHNPDDLTFLG 703
Query: 260 LVSACTEMGSLKLGKWIHDYAIKNGIELGPFLG--TALIDMYSKCGSLDDAWIVFG--IM 315
+++AC G + G D +K+ L P L +IDM + G LD A V +
Sbjct: 704 VLTACNHSGLIHEGLRYLD-QMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMS 762
Query: 316 TERNLATWNTMITSLGVH 333
E ++ W ++++S +H
Sbjct: 763 EEADVGIWKSLLSSCRIH 780
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Query: 260 LVSACTEMGSLKLGKWIHDY-AIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER 318
L+ A + +++G+ IH + + L T +I MY+ CGS DD+ VF + +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 319 NLATWNTMITSLGVHGLSEEALDLFKEM-EKANVVPDAVTFVGVLSACVHMHDVEEG 374
NL WN +I+S + L +E L+ F EM +++PD T+ V+ AC M DV G
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIG 206
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 201 bits (512), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 196/383 (51%), Gaps = 32/383 (8%)
Query: 36 NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIR 95
N + KQ+H I+R ++ D L L+ ++ A +F Q N+ D + MI
Sbjct: 355 NLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMIS 414
Query: 96 GCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWG 155
G +G +L +F+ ++ +P++ T ++ A GR +H IK F
Sbjct: 415 GYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGF-- 472
Query: 156 DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMP 215
++ C + GC+V+ CG+++ A E+F+ +
Sbjct: 473 ------------------DNRCNI-----GCAVIDMYA------KCGRMNLAYEIFERLS 503
Query: 216 SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKW 275
+++VSW +MI + P A D+F M + + + ++ + +SAC + S GK
Sbjct: 504 KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKA 563
Query: 276 IHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGL 335
IH + IK+ + + + LIDMY+KCG+L A VF M E+N+ +WN++I + G HG
Sbjct: 564 IHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGK 623
Query: 336 SEEALDLFKEM-EKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHY 394
+++L LF EM EK+ + PD +TF+ ++S+C H+ DV+EG R+F MTE YGI P EHY
Sbjct: 624 LKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHY 683
Query: 395 VCMVELYTGDSELDEVYTSEEAM 417
C+V+L+ L E Y + ++M
Sbjct: 684 ACVVDLFGRAGRLTEAYETVKSM 706
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 198/408 (48%), Gaps = 46/408 (11%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSG 101
Q+HG ++ SG+ + + LL G+ + AS +F ++ D+ TWN MI G SG
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSG 319
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQN 161
E +L F EM+ G PD T+ ++ + ++ + +H ++ D ++ +
Sbjct: 320 LMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTS 379
Query: 162 TMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVS 221
+++ YFKC RG S+ A+ +F + S +VV
Sbjct: 380 ALIDAYFKC-------------RGVSM------------------AQNIFSQCNSVDVVV 408
Query: 222 WTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAI 281
+TAMI GY+ +++ ++F + + PNE TLVS++ + +LKLG+ +H + I
Sbjct: 409 FTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFII 468
Query: 282 KNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALD 341
K G + +G A+IDMY+KCG ++ A+ +F +++R++ +WN+MIT A+D
Sbjct: 469 KKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAID 528
Query: 342 LFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELY 401
+F++M + + D V+ LSAC ++ G+ M +H S ++Y
Sbjct: 529 IFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLAS----------DVY 578
Query: 402 TGDSELDEVYTSEEAMSLSMKTNQNVVELLQESKLTSVDDIKEVINKH 449
+ +S L ++Y A ++K NV + ++E + S + I H
Sbjct: 579 S-ESTLIDMY----AKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNH 621
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 165/359 (45%), Gaps = 36/359 (10%)
Query: 31 LENCCN---FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS 87
L+ C N +Q KQVH +I + ++ D ++L G + +F +++ S
Sbjct: 42 LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRS 101
Query: 88 FT--WNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVH 145
WN +I +G AL + +ML G +PD T+P ++KAC+A F
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK------ 155
Query: 146 ALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVD 205
G ++ +T+ + C NE ++LI + GK+D
Sbjct: 156 ---------GIDFLSDTVSSLGMDC-NE---------------FVASSLIKAYLEYGKID 190
Query: 206 RAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACT 265
++FD + K+ V W M++GY KC F M+++ + PN T ++S C
Sbjct: 191 VPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCA 250
Query: 266 EMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNT 325
+ LG +H + +G++ + +L+ MYSKCG DDA +F +M+ + TWN
Sbjct: 251 SKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNC 310
Query: 326 MITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEH 384
MI+ GL EE+L F EM + V+PDA+TF +L + ++E ++ + H
Sbjct: 311 MISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRH 369
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 104/258 (40%), Gaps = 33/258 (12%)
Query: 127 FVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDK--MR 184
+++AC N G+ VHA I GD+Y ++ Y CG+ D K+F + +R
Sbjct: 40 LLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 185 GCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEG 244
S+ W ++I+ + G ++ +A +
Sbjct: 100 RSSIRPWNSIISSFVRNGLLN-------------------------------QALAFYFK 128
Query: 245 MQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGS 304
M V P+ T LV AC + + K ++ D G++ F+ ++LI Y + G
Sbjct: 129 MLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGK 188
Query: 305 LDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSA 364
+D +F + +++ WN M+ G + + F M + P+AVTF VLS
Sbjct: 189 IDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSV 248
Query: 365 CVHMHDVEEGERYFSLMT 382
C ++ G + L+
Sbjct: 249 CASKLLIDLGVQLHGLVV 266
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 247 IENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLD 306
+E P +L L+ AC+ L+ GK +H + I N I + ++ MY+ CGS
Sbjct: 30 LEETIPRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFS 87
Query: 307 DAWIVFGIMTER--NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSA 364
D +F + R ++ WN++I+S +GL +AL + +M V PD TF ++ A
Sbjct: 88 DCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKA 147
Query: 365 CVHMHDVE 372
CV + + +
Sbjct: 148 CVALKNFK 155
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 201 bits (512), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 190/372 (51%), Gaps = 13/372 (3%)
Query: 40 LKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTL 99
L+ HG ++ +T + +L+ S +M A +FD+I PD+F++N+M+
Sbjct: 81 LRVFHGMRAKNTITWNSLLI----GISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVR 136
Query: 100 SGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYV 159
+ + E A F M K D ++ +I + R + ++ +
Sbjct: 137 NVNFEKAQSFFDRMPFK----DAASWNTMITGYARRGEMEKARELFYSMME----KNEVS 188
Query: 160 QNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMP-SKN 218
N M++ Y +CG+ E F VV+WT +I G + KV+ A +F +M +KN
Sbjct: 189 WNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKN 248
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
+V+W AMI GYV+ RP + LF M E +RPN L S + C+E+ +L+LG+ IH
Sbjct: 249 LVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQ 308
Query: 279 YAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEE 338
K+ + T+LI MY KCG L DAW +F +M ++++ WN MI+ HG +++
Sbjct: 309 IVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADK 368
Query: 339 ALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMV 398
AL LF+EM + PD +TFV VL AC H V G YF M Y + P +HY CMV
Sbjct: 369 ALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMV 428
Query: 399 ELYTGDSELDEV 410
+L +L+E
Sbjct: 429 DLLGRAGKLEEA 440
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 41/248 (16%)
Query: 169 KCGNEEDGCKVFDKMRGCSVVSWTTLIAG----------------------------LIA 200
+ G+ + +VF MR + ++W +L+ G +++
Sbjct: 73 RSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLS 132
Query: 201 CG----KVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFT 256
C ++A+ FD MP K+ SW MI GY + +A +LF M + NE +
Sbjct: 133 CYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM----MEKNEVS 188
Query: 257 LVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT 316
+++S E G L+ A G+ TA+I Y K ++ A +F MT
Sbjct: 189 WNAMISGYIECGDLEKASHFFKVAPVRGV----VAWTAMITGYMKAKKVELAEAMFKDMT 244
Query: 317 -ERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGE 375
+NL TWN MI+ + E+ L LF+ M + + P++ L C + ++ G
Sbjct: 245 VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGR 304
Query: 376 RYFSLMTE 383
+ ++++
Sbjct: 305 QIHQIVSK 312
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 90/224 (40%), Gaps = 36/224 (16%)
Query: 194 LIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVK-CQRPVEAFDLFEGMQIENVRP 252
+IA + G +D A VF M +KN ++W +++ G K R +EA LF+ E P
Sbjct: 67 IIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFD----EIPEP 122
Query: 253 NEFTLVSLVSACT-------------EMGSLKLGKW---IHDYAIKNGIELGPFL----- 291
+ F+ ++S M W I YA + +E L
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM 182
Query: 292 ------GTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKE 345
A+I Y +CG L+ A F + R + W MIT E A +FK+
Sbjct: 183 EKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKD 242
Query: 346 MEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISP 389
M V + VT+ ++S V E+G + F M E GI P
Sbjct: 243 M---TVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEE-GIRP 282
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 201 bits (512), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 198/392 (50%), Gaps = 46/392 (11%)
Query: 34 CCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGK---MNYASLVFDQIN-APD 86
C N K+L+ Q+H +++ G DQ + L+ AY K M A +F +I +
Sbjct: 305 CANLKELRFTEQLHCSVVKYGFLFDQNIRTALM---VAYSKCTAMLDALRLFKEIGCVGN 361
Query: 87 SFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHA 146
+W MI G + E A+ LF EM KG P++FTY ++ A + + VHA
Sbjct: 362 VVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHA 417
Query: 147 LAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDR 206
+K + + V +++ Y K G KV+
Sbjct: 418 QVVKTNYERSSTVGTALLDAYVKLG-------------------------------KVEE 446
Query: 207 AREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTE 266
A +VF + K++V+W+AM+ GY + A +F + ++PNEFT S+++ C
Sbjct: 447 AAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAA 506
Query: 267 M-GSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNT 325
S+ GK H +AIK+ ++ + +AL+ MY+K G+++ A VF E++L +WN+
Sbjct: 507 TNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNS 566
Query: 326 MITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHY 385
MI+ HG + +ALD+FKEM+K V D VTF+GV +AC H VEEGE+YF +M
Sbjct: 567 MISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDC 626
Query: 386 GISPILEHYVCMVELYTGDSELDEVYTSEEAM 417
I+P EH CMV+LY+ +L++ E M
Sbjct: 627 KIAPTKEHNSCMVDLYSRAGQLEKAMKVIENM 658
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 143/325 (44%), Gaps = 32/325 (9%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+Q+H + I+ G D + L+ VFD++ + TW +I G +
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
+ L LF M +G P+ FT+ + G VH + +K V
Sbjct: 173 SMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVS 232
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N+++N Y KCGN V +AR +FD+ K+VV
Sbjct: 233 NSLINLYLKCGN-------------------------------VRKARILFDKTEVKSVV 261
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
+W +MI GY +EA +F M++ VR +E + S++ C + L+ + +H
Sbjct: 262 TWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSV 321
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFG-IMTERNLATWNTMITSLGVHGLSEEA 339
+K G + TAL+ YSKC ++ DA +F I N+ +W MI+ + EEA
Sbjct: 322 VKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEA 381
Query: 340 LDLFKEMEKANVVPDAVTFVGVLSA 364
+DLF EM++ V P+ T+ +L+A
Sbjct: 382 VDLFSEMKRKGVRPNEFTYSVILTA 406
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 144/331 (43%), Gaps = 35/331 (10%)
Query: 46 RIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEH 105
RI +G+ ++ + S Y N +FD+ D ++ ++ G + G +
Sbjct: 21 RIYANGVAQVRIYCFGTVSSSRLYNAHN----LFDKSPGRDRESYISLLFGFSRDGRTQE 76
Query: 106 ALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMN 165
A LF + G D + V+K FGR +H IK F D V ++++
Sbjct: 77 AKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVD 136
Query: 166 FYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAM 225
Y K N +DG R+VFDEM +NVV+WT +
Sbjct: 137 TYMKGSNFKDG-------------------------------RKVFDEMKERNVVTWTTL 165
Query: 226 IDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGI 285
I GY + E LF MQ E +PN FT + + E G G +H +KNG+
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 286 ELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKE 345
+ + +LI++Y KCG++ A I+F +++ TWN+MI+ +GL EAL +F
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 346 MEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
M V +F V+ C ++ ++ E+
Sbjct: 286 MRLNYVRLSESSFASVIKLCANLKELRFTEQ 316
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 6/174 (3%)
Query: 39 QLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCT 98
Q KQ HG I+S L + LL G + A VF + D +WN MI G
Sbjct: 513 QGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYA 572
Query: 99 LSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTY 158
G AL +FKEM + D T+ V AC + + G + ++ T
Sbjct: 573 QHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTK 632
Query: 159 VQNT-MMNFYFKCGNEEDGCKVFDKM---RGCSVVSWTTLIAGLIACGKVDRAR 208
N+ M++ Y + G E KV + M G ++ W T++A K + R
Sbjct: 633 EHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTI--WRTILAACRVHKKTELGR 684
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 205/441 (46%), Gaps = 70/441 (15%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+ +H +++SG D V+ L+ + + VFD++ D +WN +I S
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQS 186
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G E AL LF M GF P+ + I AC + G+ +H +K F D YV
Sbjct: 187 GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN 246
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEM------ 214
+ +++ Y KC E +VF KM S+V+W ++I G +A G E+ + M
Sbjct: 247 SALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 215 PSKNVVSWTAM---------------------------------IDGYVKC--------- 232
PS+ ++ M ID Y KC
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 233 ----QRPV------------------EAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSL 270
Q+ V +A ++++ M V+P+ T S++ AC+++ +L
Sbjct: 367 FSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAAL 426
Query: 271 KLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSL 330
+ GK IH ++ +E L +AL+DMYSKCG+ +A+ +F + ++++ +W MI++
Sbjct: 427 EKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAY 486
Query: 331 GVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPI 390
G HG EAL F EM+K + PD VT + VLSAC H ++EG ++FS M YGI PI
Sbjct: 487 GSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPI 546
Query: 391 LEHYVCMVELYTGDSELDEVY 411
+EHY CM+++ L E Y
Sbjct: 547 IEHYSCMIDILGRAGRLLEAY 567
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 160/359 (44%), Gaps = 37/359 (10%)
Query: 23 DSQQALVTLENCCN----FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLV 78
+S + L L C N +++K VH RI+ GL D VL + L+ A V
Sbjct: 2 ESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHV 61
Query: 79 FDQIN-APDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGF-APDKFTYPFVIKACIASN 136
F+ + D + WN ++ G + + L +FK +L PD FT+P VIKA A
Sbjct: 62 FENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALG 121
Query: 137 AFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIA 196
GR +H L +K + D V ++++ Y K E+
Sbjct: 122 REFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFEN--------------------- 160
Query: 197 GLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFT 256
+ +VFDEMP ++V SW +I + + +A +LF M+ PN +
Sbjct: 161 ----------SLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVS 210
Query: 257 LVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT 316
L +SAC+ + L+ GK IH +K G EL ++ +AL+DMY KC L+ A VF M
Sbjct: 211 LTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMP 270
Query: 317 ERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGE 375
++L WN+MI G S+ +++ M P T +L AC ++ G+
Sbjct: 271 RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGK 329
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 195/391 (49%), Gaps = 51/391 (13%)
Query: 28 LVTLENCCNFK----QLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQIN 83
TL C+ Q Q+H +I R G D + ++ +GKM A FD++
Sbjct: 81 FTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMP 140
Query: 84 APDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRA 143
+W +I G G + A LF +M P V
Sbjct: 141 HRSEVSWTALISGYIRCGELDLASKLFDQM------------PHV--------------- 173
Query: 144 VHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGK 203
D + N MM+ + K G+ ++FD+M +V++WTT+I G
Sbjct: 174 -----------KDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKD 222
Query: 204 VDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQ-IENVRPNEFTLVSLVS 262
+D AR++FD MP +N+VSW MI GY + ++P E LF+ MQ ++ P++ T++S++
Sbjct: 223 IDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLP 282
Query: 263 ACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLAT 322
A ++ G+L LG+W H + + ++ + TA++DMYSKCG ++ A +F M E+ +A+
Sbjct: 283 AISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVAS 342
Query: 323 WNTMITSLGVHGLSEEALDLFKEM---EKANVVPDAVTFVGVLSACVHMHDVEEGERYFS 379
WN MI ++G + ALDLF M EK PD +T + V++AC H VEEG ++F
Sbjct: 343 WNAMIHGYALNGNARAALDLFVTMMIEEK----PDEITMLAVITACNHGGLVEEGRKWFH 398
Query: 380 LMTEHYGISPILEHYVCMVELYTGDSELDEV 410
+M E G++ +EHY CMV+L L E
Sbjct: 399 VMRE-MGLNAKIEHYGCMVDLLGRAGSLKEA 428
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 10/213 (4%)
Query: 207 AREVFDEMPSKNVVSWT-AMIDGYVKCQRPVEAFDLFEGMQIEN-VRPNEFTLVSLVSAC 264
AR++FD+ P ++ + +MI Y++ ++ ++F L+ ++ E P+ FT +L +C
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSC 88
Query: 265 TEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWN 324
+ + G +H + G ++ T ++DMY+K G + A F M R+ +W
Sbjct: 89 SLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWT 148
Query: 325 TMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEH 384
+I+ G + A LF +M V D V + ++ V D+ R F MT
Sbjct: 149 ALISGYIRCGELDLASKLFDQMPH---VKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHK 205
Query: 385 YGISPILEHYVCMVELYTGDSELDEVYTSEEAM 417
I+ + M+ Y ++D +AM
Sbjct: 206 TVIT-----WTTMIHGYCNIKDIDAARKLFDAM 233
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 197/372 (52%), Gaps = 11/372 (2%)
Query: 36 NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGK---MNYASLVFDQINAPDSFTWNV 92
+ + L+Q+H +++ G + + L ++ YGK M+ A VFD+I P +WNV
Sbjct: 177 DLRLLRQLHCAVVKYGYSGNVDLETSIVD---VYGKCRVMSDARRVFDEIVNPSDVSWNV 233
Query: 93 MIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMR 152
++R G + A+V+F +ML P T V+ AC S A + G+ +HA+A+K+
Sbjct: 234 IVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLS 293
Query: 153 FWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFD 212
DT V ++ + Y KC E +VFD+ R + SWT+ ++G G ARE+FD
Sbjct: 294 VVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFD 353
Query: 213 EMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKL 272
MP +N+VSW AM+ GYV EA D M+ E + TLV +++ C+ + +++
Sbjct: 354 LMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQM 413
Query: 273 GKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTE-RNLATWNTMITSLG 331
GK H + ++G + + AL+DMY KCG+L A I F M+E R+ +WN ++T +
Sbjct: 414 GKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVA 473
Query: 332 VHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFS-LMTEHYGISPI 390
G SE+AL F+ M+ P T +L+ C ++ + G+ L+ + Y I +
Sbjct: 474 RVGRSEQALSFFEGMQ-VEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVV 532
Query: 391 LEHYVCMVELYT 402
+ MV++Y+
Sbjct: 533 IRG--AMVDMYS 542
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 177/392 (45%), Gaps = 62/392 (15%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
K +H ++ + D V+ + ++ A VFDQ + D +W + G +S
Sbjct: 283 KVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMS 342
Query: 101 GSPEHALVLFKEM----------LLKGFAP---------------------DKFTYPFVI 129
G A LF M +L G+ D T +++
Sbjct: 343 GLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWIL 402
Query: 130 KACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV 189
C + G+ H + + + V N +++ Y KCG + F +M
Sbjct: 403 NVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMS----- 457
Query: 190 SWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN 249
E+ DE VSW A++ G + R +A FEGMQ+E
Sbjct: 458 -------------------ELRDE------VSWNALLTGVARVGRSEQALSFFEGMQVE- 491
Query: 250 VRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAW 309
+P+++TL +L++ C + +L LGK IH + I++G ++ + A++DMYSKC D A
Sbjct: 492 AKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAI 551
Query: 310 IVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMH 369
VF R+L WN++I +G S+E +LF +E V PD VTF+G+L AC+
Sbjct: 552 EVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREG 611
Query: 370 DVEEGERYFSLMTEHYGISPILEHYVCMVELY 401
VE G +YFS M+ Y ISP +EHY CM+ELY
Sbjct: 612 HVELGFQYFSSMSTKYHISPQVEHYDCMIELY 643
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 148/319 (46%), Gaps = 38/319 (11%)
Query: 68 AYGK---MNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFT 124
AYGK ++ A +F+++ D +WN +I C +G + +F+ M G + +
Sbjct: 105 AYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETS 164
Query: 125 YPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMR 184
+ V+K+C R +H +K + G+ ++ ++++ Y KC D +VFD++
Sbjct: 165 FAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIV 224
Query: 185 GCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEG 244
S VSW ++ + G D EA +F
Sbjct: 225 NPSDVSWNVIVRRYLEMGFND-------------------------------EAVVMFFK 253
Query: 245 MQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGS 304
M NVRP T+ S++ AC+ +L++GK IH A+K + + T++ DMY KC
Sbjct: 254 MLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDR 313
Query: 305 LDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSA 364
L+ A VF ++L +W + ++ + GL+ EA +LF M + N+ V++ +L
Sbjct: 314 LESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNI----VSWNAMLGG 369
Query: 365 CVHMHDVEEGERYFSLMTE 383
VH H+ +E + +LM +
Sbjct: 370 YVHAHEWDEALDFLTLMRQ 388
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 126/284 (44%), Gaps = 38/284 (13%)
Query: 28 LVTLENCC----NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQIN 83
LV + N C + + KQ HG I R G + ++ LL G + A++ F Q++
Sbjct: 398 LVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMS 457
Query: 84 A-PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGR 142
D +WN ++ G G E AL F+ M ++ P K+T ++ C A + G+
Sbjct: 458 ELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGK 516
Query: 143 AVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACG 202
A+H I+ + D ++ M++ Y K C+ FD
Sbjct: 517 AIHGFLIRDGYKIDVVIRGAMVDMYSK-------CRCFDY-------------------- 549
Query: 203 KVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVS 262
A EVF E +++++ W ++I G + R E F+LF ++ E V+P+ T + ++
Sbjct: 550 ----AIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQ 605
Query: 263 ACTEMGSLKLG-KWIHDYAIKNGIELGPFLGTALIDMYSKCGSL 305
AC G ++LG ++ + K I +I++Y K G L
Sbjct: 606 ACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCL 649
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Query: 290 FLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKA 349
FL I+ Y KCG +DDA +F M ER+ +WN +IT+ +G+S+E +F+ M +
Sbjct: 97 FLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRD 156
Query: 350 NVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELY 401
V +F GVL +C + D+ R YG S ++ +V++Y
Sbjct: 157 GVRATETSFAGVLKSCGLILDLRL-LRQLHCAVVKYGYSGNVDLETSIVDVY 207
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 24 SQQALVTL-ENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVF 79
S+ L TL C N L K +HG +IR G D V+ ++ +YA VF
Sbjct: 495 SKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVF 554
Query: 80 DQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFD 139
+ D WN +IRGC +G + LF + +G PD T+ +++ACI +
Sbjct: 555 KEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVE 614
Query: 140 FG 141
G
Sbjct: 615 LG 616
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 213/454 (46%), Gaps = 46/454 (10%)
Query: 37 FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRG 96
F + H ++I+ GL + ++ +LL G+M A +F ++ + +WNVMI+G
Sbjct: 174 FGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKG 233
Query: 97 CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIK-------------------------- 130
+ E A+ +F+ M + F PD+ T+ V+
Sbjct: 234 FSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVS 293
Query: 131 ---------ACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFD 181
C A VH IK F +N +++ Y K G +D +F
Sbjct: 294 GEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFR 353
Query: 182 KMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMP--------SKNVVSWTAMIDGYVKCQ 233
++R + SW +LI + GK+D A +F E+ NVV+WT++I G
Sbjct: 354 QIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQG 413
Query: 234 RPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGT 293
R ++ + F MQ V N T+ ++S C E+ +L LG+ IH + I+ + +
Sbjct: 414 RGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQN 473
Query: 294 ALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVP 353
AL++MY+KCG L + +VF + +++L +WN++I G+HG +E+AL +F M + P
Sbjct: 474 ALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHP 533
Query: 354 DAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTS 413
D + V VLSAC H VE+G F M++ +G+ P EHY C+V+L L E S
Sbjct: 534 DGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKE--AS 591
Query: 414 EEAMSLSMKTNQNVV-ELLQESKLTSVDDIKEVI 446
E ++ M+ V+ LL ++ DI E I
Sbjct: 592 EIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGI 625
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 164/360 (45%), Gaps = 12/360 (3%)
Query: 34 CCNFKQLKQVHGRIIRSGLT-HDQVLLRKLLQHSCAYGKMNYASLVFDQINA---PDSFT 89
C +Q +QVH +++ S L L+ G + A VF+ ++ D
Sbjct: 66 CLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRL 125
Query: 90 WNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAI 149
WN +++ G E+AL L++ M +G D + P +++AC F RA H I
Sbjct: 126 WNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVI 185
Query: 150 KMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRARE 209
++ + +V N ++ Y K G D +F +M + +SW +I G + A +
Sbjct: 186 QIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVK 245
Query: 210 VFDEMPSKNV----VSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACT 265
+F+ M + V+WT+++ + +C + + F M++ + L S C
Sbjct: 246 IFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCA 305
Query: 266 EMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNT 325
E+ +L + + +H Y IK G E ALI +Y K G + DA +F + + + +WN+
Sbjct: 306 ELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNS 365
Query: 326 MITSLGVHGLSEEALDLFKEMEK----ANVVPDAVTFVGVLSACVHMHDVEEGERYFSLM 381
+ITS G +EAL LF E+E+ NV + VT+ V+ C ++ YF M
Sbjct: 366 LITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 146/506 (28%), Positives = 224/506 (44%), Gaps = 84/506 (16%)
Query: 28 LVTLENCCNFKQL---KQVHGRIIRSGLTHDQVLL-RKLLQHSCAYGKMNYASLVFDQIN 83
+ TL+ C K +Q+HG ++R G D L+ G M A LVF +
Sbjct: 64 IATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-S 122
Query: 84 APDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRA 143
D F +N +I G ++GSP A+ ++EM G PDK+T+P ++K A D +
Sbjct: 123 ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KK 181
Query: 144 VHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFD---------------------- 181
VH LA K+ F D YV + ++ Y K + ED KVFD
Sbjct: 182 VHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIF 241
Query: 182 ----------KMR----GCSVVSWTTLIAGLIACGKVDRAREV----------------- 210
KMR G S + T++++ G +D R +
Sbjct: 242 RFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSN 301
Query: 211 ------------------FDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRP 252
F+ M +++ +W +++ + C LFE M +RP
Sbjct: 302 ALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRP 361
Query: 253 NEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGI----ELGPFLGTALIDMYSKCGSLDDA 308
+ TL +++ C + SL+ G+ IH Y I +G+ F+ +L+DMY KCG L DA
Sbjct: 362 DIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDA 421
Query: 309 WIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHM 368
+VF M ++ A+WN MI GV E ALD+F M +A V PD +TFVG+L AC H
Sbjct: 422 RMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHS 481
Query: 369 HDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNV- 427
+ EG + + M Y I P +HY C++++ +L+E Y E A+S + N V
Sbjct: 482 GFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAY--ELAISKPICDNPVVW 539
Query: 428 VELLQESKLTSVDDIKEVINKHYGDL 453
+L +L D+ V K +L
Sbjct: 540 RSILSSCRLHGNKDLALVAGKRLHEL 565
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Query: 253 NEFTLVSLVSACTEMGSLKLGKWIHDYAIKNG-IELGPFLGTALIDMYSKCGSLDDAWIV 311
N T ++ + C + G+ IH + ++ G ++ P GT+L++MY+KCG + A +V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 312 FGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVL--SACVHMH 369
FG +ER++ +N +I+ V+G +A++ ++EM ++PD TF +L S + +
Sbjct: 119 FG-GSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELS 177
Query: 370 DVEE 373
DV++
Sbjct: 178 DVKK 181
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 191/393 (48%), Gaps = 38/393 (9%)
Query: 31 LENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS 87
L +C + L QVH I++ L +D + L+ + A VFD A D
Sbjct: 357 LTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADV 416
Query: 88 FTWNVMIRGCTLSGSP---EHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAV 144
+N MI G + G+ AL +F++M + P T+ +++A + + + +
Sbjct: 417 VLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQI 476
Query: 145 HALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKV 204
H L K D + + +++ Y C +D
Sbjct: 477 HGLMFKYGLNLDIFAGSALIDVYSNCYCLKD----------------------------- 507
Query: 205 DRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSAC 264
+R VFDEM K++V W +M GYV+ EA +LF +Q+ RP+EFT ++V+A
Sbjct: 508 --SRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAA 565
Query: 265 TEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWN 324
+ S++LG+ H +K G+E P++ AL+DMY+KCGS +DA F R++ WN
Sbjct: 566 GNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWN 625
Query: 325 TMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEH 384
++I+S HG ++AL + ++M + P+ +TFVGVLSAC H VE+G + F LM
Sbjct: 626 SVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR- 684
Query: 385 YGISPILEHYVCMVELYTGDSELDEVYTSEEAM 417
+GI P EHYVCMV L L++ E M
Sbjct: 685 FGIEPETEHYVCMVSLLGRAGRLNKARELIEKM 717
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 164/340 (48%), Gaps = 34/340 (10%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
KQ+H I+R GL D L+ L+ G++ A +F+ + + +W ++ G +
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN 328
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
+ A+ LF M G PD + ++ +C + +A FG VHA IK D+YV
Sbjct: 329 ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVT 388
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N++++ Y KC D AR+VFD + +VV
Sbjct: 389 NSLIDMYAKCDCLTD-------------------------------ARKVFDIFAAADVV 417
Query: 221 SWTAMIDGYVKCQRPVE---AFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
+ AMI+GY + E A ++F M+ +RP+ T VSL+ A + SL L K IH
Sbjct: 418 LFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIH 477
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSE 337
K G+ L F G+ALID+YS C L D+ +VF M ++L WN+M +E
Sbjct: 478 GLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENE 537
Query: 338 EALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERY 377
EAL+LF E++ + PD TF +++A ++ V+ G+ +
Sbjct: 538 EALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEF 577
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 203/451 (45%), Gaps = 58/451 (12%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSG 101
Q+ +++SG D + L+ G ++YA LVFD + + TW MI GC G
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQN 161
+L LF +++ PD + V+ AC + G+ +HA ++ D + N
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288
Query: 162 TMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVS 221
+++ Y KCG +V A ++F+ MP+KN++S
Sbjct: 289 VLIDSYVKCG-------------------------------RVIAAHKLFNGMPNKNIIS 317
Query: 222 WTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAI 281
WT ++ GY + EA +LF M ++P+ + S++++C + +L G +H Y I
Sbjct: 318 WTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTI 377
Query: 282 KNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMI---TSLGVHGLSEE 338
K + ++ +LIDMY+KC L DA VF I ++ +N MI + LG E
Sbjct: 378 KANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHE 437
Query: 339 ALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMV 398
AL++F++M + P +TFV +L A + + ++ LM + YG++ + ++
Sbjct: 438 ALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK-YGLNLDIFAGSALI 496
Query: 399 ELYTG-----DSEL--DE-------VYTSEEAMSLSMKTNQNVVELLQESKLTSVDDIKE 444
++Y+ DS L DE ++ S A + N+ + L E +L+
Sbjct: 497 DVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLS------- 549
Query: 445 VINKHYGDLNFSKLDLDHSSVSSVPETQELH 475
+ + F+ + +++SV QE H
Sbjct: 550 --RERPDEFTFANMVTAAGNLASVQLGQEFH 578
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 164/339 (48%), Gaps = 38/339 (11%)
Query: 43 VHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGS 102
VHG+II GL D L L+ G M YA VF+++ + +W+ M+ C G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 103 PEHALVLFKEML-LKGFAPDKFTYPFVIKACIASNAFDFGR----AVHALAIKMRFWGDT 157
E +LV+F E + +P+++ I+AC S GR + + +K F D
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 158 YVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK 217
YV +++FY K GN +D AR VFD +P K
Sbjct: 184 YVGTLLIDFYLKDGN-------------------------------IDYARLVFDALPEK 212
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
+ V+WT MI G VK R + LF + +NV P+ + L +++SAC+ + L+ GK IH
Sbjct: 213 STVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIH 272
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSE 337
+ ++ G+E+ L LID Y KCG + A +F M +N+ +W T+++ + L +
Sbjct: 273 AHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHK 332
Query: 338 EALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
EA++LF M K + PD +L++C +H + G +
Sbjct: 333 EAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQ 371
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 127/306 (41%), Gaps = 35/306 (11%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
KQ+HG + + GL D L+ + + LVFD++ D WN M G
Sbjct: 474 KQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQ 533
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
E AL LF E+ L PD+FT+ ++ A + G+ H +K + Y+
Sbjct: 534 SENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYIT 593
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N +++ Y KCG+ ED A + FD S++VV
Sbjct: 594 NALLDMYAKCGSPED-------------------------------AHKAFDSAASRDVV 622
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
W ++I Y +A + E M E + PN T V ++SAC+ G ++ G +
Sbjct: 623 CWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM 682
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLA-TWNTMITSLGVHG---LS 336
++ GIE ++ + + G L+ A + M + A W ++++ G L+
Sbjct: 683 LRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELA 742
Query: 337 EEALDL 342
E A ++
Sbjct: 743 EHAAEM 748
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 95/223 (42%), Gaps = 6/223 (2%)
Query: 33 NCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNV 92
N + + ++ H ++++ GL + + LL G A FD + D WN
Sbjct: 567 NLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNS 626
Query: 93 MIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMR 152
+I G + AL + ++M+ +G P+ T+ V+ AC + + G L ++
Sbjct: 627 VISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFG 686
Query: 153 FWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM-RGCSVVSWTTLIAGLIACGKVDRAREVF 211
+T M++ + G ++ +KM + + W +L++G G V+ A E
Sbjct: 687 IEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELA-EHA 745
Query: 212 DEMP----SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENV 250
EM K+ S+T + + Y EA + E M++E V
Sbjct: 746 AEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGV 788
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 187/362 (51%), Gaps = 18/362 (4%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGK---MNYASLVFDQINAPDSFTWNVMIRGCT 98
Q++G I+S L+ D + + YGK + A VFD++ D+ +WN +I
Sbjct: 403 QIYGLAIKSSLSLDVCVANAAID---MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHE 459
Query: 99 LSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTY 158
+G L LF ML PD+FT+ ++KAC + +G +H+ +K ++
Sbjct: 460 QNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSS 518
Query: 159 VQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKN 218
V ++++ Y KCG E+ K+ + + VS G ++ ++ ++ +
Sbjct: 519 VGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS-----------GTMEELEKMHNKRLQEM 567
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
VSW ++I GYV ++ +A LF M + P++FT +++ C + S LGK IH
Sbjct: 568 CVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHA 627
Query: 279 YAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEE 338
IK ++ ++ + L+DMYSKCG L D+ ++F R+ TWN MI HG EE
Sbjct: 628 QVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEE 687
Query: 339 ALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMV 398
A+ LF+ M N+ P+ VTF+ +L AC HM +++G YF +M YG+ P L HY MV
Sbjct: 688 AIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMV 747
Query: 399 EL 400
++
Sbjct: 748 DI 749
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 154/348 (44%), Gaps = 36/348 (10%)
Query: 22 FDSQQALVTLENCCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASL- 77
FD + + L+ C + Q+HG ++R G D V LL A GK SL
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMY-AKGKRFVESLR 236
Query: 78 VFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNA 137
VF I +S +W+ +I GC + AL FKEM + Y V+++C A +
Sbjct: 237 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 296
Query: 138 FDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAG 197
G +HA A+K F D V+ ++ Y KC N +D
Sbjct: 297 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQD---------------------- 334
Query: 198 LIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTL 257
A+ +FD + N S+ AMI GY + + +A LF + + +E +L
Sbjct: 335 ---------AQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 385
Query: 258 VSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTE 317
+ AC + L G I+ AIK+ + L + A IDMY KC +L +A+ VF M
Sbjct: 386 SGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR 445
Query: 318 RNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSAC 365
R+ +WN +I + +G E L LF M ++ + PD TF +L AC
Sbjct: 446 RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC 493
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 170/398 (42%), Gaps = 60/398 (15%)
Query: 30 TLENCCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPD 86
L +C +L+ Q+H ++S D ++ L M A ++FD +
Sbjct: 287 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLN 346
Query: 87 SFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHA 146
++N MI G + AL+LF ++ G D+ + V +AC G ++
Sbjct: 347 RQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG 406
Query: 147 LAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDR 206
LAIK D V N ++ Y KC + +VFD+MR VSW +IA GK
Sbjct: 407 LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGK--- 463
Query: 207 AREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTE 266
GY E LF M + P+EFT S++ ACT
Sbjct: 464 ---------------------GY-------ETLFLFVSMLRSRIEPDEFTFGSILKACTG 495
Query: 267 MGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER-NLA---- 321
GSL G IH +K+G+ +G +LIDMYSKCG +++A + +R N++
Sbjct: 496 -GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTME 554
Query: 322 ---------------TWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACV 366
+WN++I+ + SE+A LF M + + PD T+ VL C
Sbjct: 555 ELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCA 614
Query: 367 HMHDVEEGERYFSLMTEHYGISPILEHYVC--MVELYT 402
++ G++ + + + S + Y+C +V++Y+
Sbjct: 615 NLASAGLGKQIHAQVIKKELQSDV---YICSTLVDMYS 649
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 119/251 (47%)
Query: 124 TYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM 183
+ FV K C A + G+ HA I F T+V N ++ Y + VFDKM
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 184 RGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFE 243
VVSW +I G + +A F+ MP ++VVSW +M+ GY++ +++ ++F
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 244 GMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCG 303
M E + + T ++ C+ + LG IH ++ G + +AL+DMY+K
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 304 SLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLS 363
++ VF + E+N +W+ +I + L AL FKEM+K N + VL
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 364 ACVHMHDVEEG 374
+C + ++ G
Sbjct: 290 SCAALSELRLG 300
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 151/371 (40%), Gaps = 62/371 (16%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
KQ H +I SG +L LLQ AS+VFD++ D +WN MI G + S
Sbjct: 68 KQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKS 127
Query: 101 -------------------------------GSPEHALVLFKEMLLKGFAPDKFTYPFVI 129
G ++ +F +M +G D T+ ++
Sbjct: 128 NDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIIL 187
Query: 130 KACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV 189
K C G +H + +++ D + +++ Y K G + + +R
Sbjct: 188 KVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK------GKRFVESLR----- 236
Query: 190 SWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN 249
VF +P KN VSW+A+I G V+ A F+ MQ N
Sbjct: 237 --------------------VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVN 276
Query: 250 VRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAW 309
++ S++ +C + L+LG +H +A+K+ + TA +DMY+KC ++ DA
Sbjct: 277 AGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQ 336
Query: 310 IVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMH 369
I+F N ++N MIT +AL LF + + + D ++ GV AC +
Sbjct: 337 ILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVK 396
Query: 370 DVEEGERYFSL 380
+ EG + + L
Sbjct: 397 GLSEGLQIYGL 407
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 30 TLENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPD 86
L+ C N KQ+H ++I+ L D + L+ G ++ + L+F++ D
Sbjct: 609 VLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRD 668
Query: 87 SFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFG 141
TWN MI G G E A+ LF+ M+L+ P+ T+ +++AC D G
Sbjct: 669 FVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKG 723
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 194/406 (47%), Gaps = 37/406 (9%)
Query: 12 VPHFNTPTTRFDSQQALV-TLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYG 70
VP + ++ LV L N +H ++ G D + L+
Sbjct: 19 VPQYKNDFFHLKTKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLK 78
Query: 71 KMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLL-KGFAPDKFTYPFVI 129
++N A +FD++ P+ +W +I G G P++AL +F++M + P+++T+ V
Sbjct: 79 EINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVF 138
Query: 130 KACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV 189
KAC A G+ +HA + V +++++ Y KC +
Sbjct: 139 KACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCND----------------- 181
Query: 190 SWTTLIAGLIACGKVDRAREVFDEMPS--KNVVSWTAMIDGYVKCQRPVEAFDLFEGMQ- 246
V+ AR VFD M +NVVSWT+MI Y + R EA +LF
Sbjct: 182 --------------VETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNA 227
Query: 247 -IENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSL 305
+ + R N+F L S++SAC+ +G L+ GK H + G E + T+L+DMY+KCGSL
Sbjct: 228 ALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSL 287
Query: 306 DDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSAC 365
A +F + ++ ++ +MI + HGL E A+ LF EM + P+ VT +GVL AC
Sbjct: 288 SCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHAC 347
Query: 366 VHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVY 411
H V EG Y SLM E YG+ P HY C+V++ +DE Y
Sbjct: 348 SHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAY 393
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/378 (32%), Positives = 188/378 (49%), Gaps = 34/378 (8%)
Query: 37 FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRG 96
++ K VHG R G ++D V+ +L + YA VFD + TW+ MI G
Sbjct: 221 LREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGG 280
Query: 97 CTLSGSPEHALVLFKEMLLKGFAP--DKFTYPFVIKACIASNAFDFGRAVHALAIKMRFW 154
+ + A +F +ML+ ++ C GR VH A+K F
Sbjct: 281 YVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFI 340
Query: 155 GDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEM 214
D VQNT+++FY K G+ C F + F E+
Sbjct: 341 LDLTVQNTIISFYAKYGSL---CDAFRQ----------------------------FSEI 369
Query: 215 PSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGK 274
K+V+S+ ++I G V RP E+F LF M+ +RP+ TL+ +++AC+ + +L G
Sbjct: 370 GLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGS 429
Query: 275 WIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHG 334
H Y + +G + + AL+DMY+KCG LD A VF M +R++ +WNTM+ G+HG
Sbjct: 430 SCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHG 489
Query: 335 LSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTE-HYGISPILEH 393
L +EAL LF M++ V PD VT + +LSAC H V+EG++ F+ M+ + + P ++H
Sbjct: 490 LGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDH 549
Query: 394 YVCMVELYTGDSELDEVY 411
Y CM +L LDE Y
Sbjct: 550 YNCMTDLLARAGYLDEAY 567
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 169/367 (46%), Gaps = 51/367 (13%)
Query: 28 LVTLENCCNFKQL---KQVHGRIIRSGLT-HDQVLLRKLLQHSCAYGKMNYASLVFDQIN 83
L LE C + L + +H +++ LT +L L + + ++ A VFD+I
Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIP 62
Query: 84 AP--DSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFG 141
P + W++MIR + E AL L+ +ML G P K+TYPFV+KAC A D G
Sbjct: 63 HPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDG 122
Query: 142 RAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIAC 201
+ +H+ F D YV +++FY KCG E KVFD+M
Sbjct: 123 KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEM------------------ 164
Query: 202 GKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGM-QIENVRPNEFTLVSL 260
P +++V+W AMI G+ + LF M +I+ + PN T+V +
Sbjct: 165 -------------PKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGM 211
Query: 261 VSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNL 320
A G+L+ GK +H Y + G + T ++D+Y+K + A VF + ++N
Sbjct: 212 FPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNE 271
Query: 321 ATWNTMITSLGVHGLSEEALDLFKEM----EKANVVPDAVTFV-------GVLSA--CVH 367
TW+ MI + + +EA ++F +M A V P A+ + G LS CVH
Sbjct: 272 VTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVH 331
Query: 368 MHDVEEG 374
+ V+ G
Sbjct: 332 CYAVKAG 338
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 141/325 (43%), Gaps = 37/325 (11%)
Query: 29 VTLENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAP 85
+ L C F L + VH +++G D + ++ YG + A F +I
Sbjct: 313 LILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLK 372
Query: 86 DSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVH 145
D ++N +I GC ++ PE + LF EM G PD T V+ AC A G + H
Sbjct: 373 DVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCH 432
Query: 146 ALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVD 205
+ + +T + N +M+ Y KCG + +VFD M +VSW T++ G
Sbjct: 433 GYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGF------- 485
Query: 206 RAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACT 265
I G K EA LF MQ V P+E TL++++SAC+
Sbjct: 486 -------------------GIHGLGK-----EALSLFNSMQETGVNPDEVTLLAILSACS 521
Query: 266 EMGSLKLGKWIHDYAIKNGIELGPFLG--TALIDMYSKCGSLDDAWIVFGIMT-ERNLAT 322
G + GK + + + + P + + D+ ++ G LD+A+ M E ++
Sbjct: 522 HSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRV 581
Query: 323 WNTMITSLGVHGLSEEALDLFKEME 347
T++++ + +E ++ K+M+
Sbjct: 582 LGTLLSACWTYKNAELGNEVSKKMQ 606
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 100/191 (52%), Gaps = 6/191 (3%)
Query: 188 VVSWTTLIAGLIACGKVDRAREVFDEMPSK--NVVSWTAMIDGYVKCQRPVEAFDLFEGM 245
+V+ T L A +C +V+ AR VFDE+P N ++W MI Y +A DL+ M
Sbjct: 38 LVNLTRLYA---SCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKM 94
Query: 246 QIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSL 305
VRP ++T ++ AC + ++ GK IH + + ++ TAL+D Y+KCG L
Sbjct: 95 LNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGEL 154
Query: 306 DDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKAN-VVPDAVTFVGVLSA 364
+ A VF M +R++ WN MI+ +H + + LF +M + + + P+ T VG+ A
Sbjct: 155 EMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPA 214
Query: 365 CVHMHDVEEGE 375
+ EG+
Sbjct: 215 LGRAGALREGK 225
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 257 LVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALID---MYSKCGSLDDAWIVFG 313
+SL+ C +L LG+ IH + +K + L T L++ +Y+ C ++ A VF
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSS--STVLVNLTRLYASCNEVELARHVFD 59
Query: 314 IMTER--NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDV 371
+ N W+ MI + + +E+ALDL+ +M + V P T+ VL AC + +
Sbjct: 60 EIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI 119
Query: 372 EEGERYFSLMTEHYGISPI-LEHYVC--MVELYTGDSELD 408
++G+ L+ H S + YVC +V+ Y EL+
Sbjct: 120 DDGK----LIHSHVNCSDFATDMYVCTALVDFYAKCGELE 155
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 6/143 (4%)
Query: 6 CNPDANVPHFN---TPTTRFDSQQALVTLENCCNFKQL---KQVHGRIIRSGLTHDQVLL 59
C P+ + F+ T R D L L C + L HG + G + +
Sbjct: 388 CRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSIC 447
Query: 60 RKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFA 119
L+ GK++ A VFD ++ D +WN M+ G + G + AL LF M G
Sbjct: 448 NALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVN 507
Query: 120 PDKFTYPFVIKACIASNAFDFGR 142
PD+ T ++ AC S D G+
Sbjct: 508 PDEVTLLAILSACSHSGLVDEGK 530
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 185/389 (47%), Gaps = 39/389 (10%)
Query: 39 QLKQVHGRIIRSGLTHDQVLLRKLLQH---SCAYGKMNYASLVFDQINAPDSFTWNVMIR 95
L+Q+H ++R+ L + + L S +NY+ VF Q P N MIR
Sbjct: 26 HLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIR 85
Query: 96 GCTLSGSPEHALVLFKEMLLKGFAP-DKFTYPFVIKACIASNAFDFGRAVHALAIKMRFW 154
+LS +P LF+ + P + + F +K CI S G +H F
Sbjct: 86 AFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFL 145
Query: 155 GDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEM 214
D+ + T+M+ Y C N D CKVF DE+
Sbjct: 146 SDSLLMTTLMDLYSTCENSTDACKVF-------------------------------DEI 174
Query: 215 PSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE---NVRPNEFTLVSLVSACTEMGSLK 271
P ++ VSW + Y++ +R + LF+ M+ + V+P+ T + + AC +G+L
Sbjct: 175 PKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALD 234
Query: 272 LGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLG 331
GK +HD+ +NG+ L L+ MYS+CGS+D A+ VF M ERN+ +W +I+ L
Sbjct: 235 FGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLA 294
Query: 332 VHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLM-TEHYGISPI 390
++G +EA++ F EM K + P+ T G+LSAC H V EG +F M + + I P
Sbjct: 295 MNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPN 354
Query: 391 LEHYVCMVELYTGDSELDEVYTSEEAMSL 419
L HY C+V+L LD+ Y+ ++M +
Sbjct: 355 LHHYGCVVDLLGRARLLDKAYSLIKSMEM 383
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 165/427 (38%), Gaps = 83/427 (19%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSG 101
Q+HG+I G D +L+ L+ A VFD+I D+ +WNV+ +
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNK 193
Query: 102 SPEHALVLFKEM---LLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTY 158
LVLF +M + PD T ++AC A DFG+ VH + G
Sbjct: 194 RTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALN 253
Query: 159 VQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKN 218
+ NT+++ Y +CG+ +D+A +VF M +N
Sbjct: 254 LSNTLVSMYSRCGS-------------------------------MDKAYQVFYGMRERN 282
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
VVSWTA+I G EA + F M + P E TL L+SAC+ G + G D
Sbjct: 283 VVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFD 342
Query: 279 YAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEE 338
++ P NL + ++ LG L ++
Sbjct: 343 RMRSGEFKIKP-----------------------------NLHHYGCVVDLLGRARLLDK 373
Query: 339 ALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFS----LMTEHYGISPILEHY 394
A L K ME + PD+ + +L AC DVE GER S L E G Y
Sbjct: 374 AYSLIKSME---MKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAG------DY 424
Query: 395 VCMVELYTGDSELDEVYTSEEAMS---LSMKTNQNVVELLQESKLTSVDDI----KEVIN 447
V ++ Y+ + ++V M + K + +EL VDD+ KE I
Sbjct: 425 VLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIY 484
Query: 448 KHYGDLN 454
K ++N
Sbjct: 485 KMLAEIN 491
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 205/421 (48%), Gaps = 25/421 (5%)
Query: 30 TLENCCNFKQL---KQVHGRIIRSG-LTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAP 85
L C + + L K++H +++G L + + L+ C ++ VFD +
Sbjct: 308 VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR 367
Query: 86 DSFTWNVMIRGCTLSGSPEHALVLFKEML-LKGFAPDKFTYPFVIKACIASNAFDFGRAV 144
WN MI G + + + AL+LF M G + T V+ AC+ S AF A+
Sbjct: 368 KIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAI 427
Query: 145 HALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKV 204
H +K D +VQNT+M+ Y + G + ++F KM +V+W T+I G +
Sbjct: 428 HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHH 487
Query: 205 DRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSAC 264
+ A + +M + +R V +G +++PN TL++++ +C
Sbjct: 488 EDALLLLHKMQN---------------LERKVS-----KGASRVSLKPNSITLMTILPSC 527
Query: 265 TEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWN 324
+ +L GK IH YAIKN + +G+AL+DMY+KCG L + VF + ++N+ TWN
Sbjct: 528 AALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWN 587
Query: 325 TMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEH 384
+I + G+HG +EA+DL + M V P+ VTF+ V +AC H V+EG R F +M
Sbjct: 588 VIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPD 647
Query: 385 YGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNVVELLQESKLTSVDDIKE 444
YG+ P +HY C+V+L + E Y M LL S++ + +I E
Sbjct: 648 YGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGE 707
Query: 445 V 445
+
Sbjct: 708 I 708
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 146/304 (48%), Gaps = 38/304 (12%)
Query: 76 SLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIAS 135
S+ Q +P+ W ++R S A++ + +M++ G PD + +P ++KA
Sbjct: 53 SIFISQSRSPE--WWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADL 110
Query: 136 NAFDFGRAVHALAIKMRFWGDTY-VQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTL 194
+ G+ +HA K + D+ V NT++N Y KCG D V+
Sbjct: 111 QDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG---DFGAVY-------------- 153
Query: 195 IAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNE 254
+VFD + +N VSW ++I ++ A + F M ENV P+
Sbjct: 154 --------------KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199
Query: 255 FTLVSLVSACTEMG---SLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIV 311
FTLVS+V+AC+ + L +GK +H Y ++ G EL F+ L+ MY K G L + ++
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVL 258
Query: 312 FGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDV 371
G R+L TWNT+++SL + EAL+ +EM V PD T VL AC H+ +
Sbjct: 259 LGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEML 318
Query: 372 EEGE 375
G+
Sbjct: 319 RTGK 322
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 154/335 (45%), Gaps = 42/335 (12%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLL---QHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGC 97
KQ+H + + G D V + L C G VFD+I+ + +WN +I
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKC--GDFGAVYKVFDRISERNQVSWNSLISSL 174
Query: 98 TLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKAC---IASNAFDFGRAVHALAIKMRFW 154
E AL F+ ML + P FT V+ AC G+ VHA ++ +
Sbjct: 175 CSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR-KGE 233
Query: 155 GDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEM 214
++++ NT++ Y K G K+ ++ +
Sbjct: 234 LNSFIINTLVAMYGKLG-------------------------------KLASSKVLLGSF 262
Query: 215 PSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGK 274
+++V+W ++ + ++ +EA + M +E V P+EFT+ S++ AC+ + L+ GK
Sbjct: 263 GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK 322
Query: 275 WIHDYAIKNG-IELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVH 333
+H YA+KNG ++ F+G+AL+DMY C + VF M +R + WN MI +
Sbjct: 323 ELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQN 382
Query: 334 GLSEEALDLFKEMEK-ANVVPDAVTFVGVLSACVH 367
+EAL LF ME+ A ++ ++ T GV+ ACV
Sbjct: 383 EHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 194 bits (494), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 187/360 (51%), Gaps = 6/360 (1%)
Query: 55 DQVLLRKLLQHSCAYGKMNYASLVF---DQINAPDSFTWNVMIRGCTLSGSPEHALVLFK 111
D V ++ C G ++ A VF ++N D+ +WN +I G +G E AL +
Sbjct: 192 DSVARNAMIAAYCREGDIDKALSVFWRNPELN--DTISWNTLIAGYAQNGYEEEALKMAV 249
Query: 112 EMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCG 171
M G D+ ++ V+ + + G+ VHA +K + + +V + +++ Y KCG
Sbjct: 250 SMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCG 309
Query: 172 NEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVK 231
N + ++ S +++I G + GK+ A+ +FD + KN+V WTAM GY+
Sbjct: 310 NMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLN 369
Query: 232 CQRPVEAFDLFEG-MQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPF 290
++P +L + E P+ +VS++ AC+ ++ GK IH ++++ GI +
Sbjct: 370 LRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKK 429
Query: 291 LGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKAN 350
L TA +DMYSKCG+++ A +F ER+ +N MI HG ++ F++M +
Sbjct: 430 LVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGG 489
Query: 351 VVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEV 410
PD +TF+ +LSAC H V EGE+YF M E Y ISP HY CM++LY LD+
Sbjct: 490 FKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKA 549
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 159/362 (43%), Gaps = 45/362 (12%)
Query: 44 HGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSP 103
H R I+SG T V +L+ G + A VFD++ + ++WN +I +
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 104 EHALVLFKE-----------MLLKGFAP-------------------------DKFTYPF 127
+ A LF+ LL GFA D FT
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 128 VIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDK--MRG 185
++K +G +H + +K G + +++++ Y KCG ++ C +F+ +
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEF 190
Query: 186 CSVVSWTTLIAGLIACGKVDRAREVFDEMPSKN-VVSWTAMIDGYVKCQRPVEAFDLFEG 244
V+ +IA G +D+A VF P N +SW +I GY + EA +
Sbjct: 191 VDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVS 250
Query: 245 MQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGS 304
M+ ++ +E + ++++ + + SLK+GK +H +KNG F+ + ++D+Y KCG+
Sbjct: 251 MEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGN 310
Query: 305 L---DDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGV 361
+ + A +++G NL + ++MI G EA LF + + N+V F+G
Sbjct: 311 MKYAESAHLLYGF---GNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGY 367
Query: 362 LS 363
L+
Sbjct: 368 LN 369
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 267 MGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTM 326
M LK G H +IK+G L L+++YSK G L +A VF M ERN+ +WN +
Sbjct: 1 MKCLKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAV 60
Query: 327 ITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSA 364
I + +EA +LF E N D +T+ +LS
Sbjct: 61 IAAYVKFNNVKEARELF---ESDNCERDLITYNTLLSG 95
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/370 (32%), Positives = 200/370 (54%), Gaps = 24/370 (6%)
Query: 77 LVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLL--------KGFAP-DKFTYPF 127
L+ + N+ F +N ++R +L +P HA L+ ++ K P D FTY F
Sbjct: 67 LLHQKQNSGKLFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLF 126
Query: 128 VIKACIASN----AFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM 183
++KA +SN + G +H L +K+ F YVQ ++ Y GN D KVFD+M
Sbjct: 127 LLKA--SSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEM 184
Query: 184 RGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFE 243
+ V+W +I GL G ++A ++MP++ VVSWT +IDGY + +P EA LF
Sbjct: 185 PERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFS 244
Query: 244 GM-QIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNG-IELGPFLGTALIDMYSK 301
M + ++PNE T+++++ A +G LK+ +H Y K G + + +LID Y+K
Sbjct: 245 RMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAK 304
Query: 302 CGSLDDAWIVFGIMT--ERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFV 359
CG + A+ F + +NL +W TMI++ +HG+ +EA+ +FK+ME+ + P+ VT +
Sbjct: 305 CGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMI 364
Query: 360 GVLSACVHMHDVEEG-ERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMS 418
VL+AC H EE +F+ M Y I+P ++HY C+V++ L+E E ++
Sbjct: 365 SVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEA----EKIA 420
Query: 419 LSMKTNQNVV 428
L + + V
Sbjct: 421 LEIPIEEKAV 430
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 132/323 (40%), Gaps = 74/323 (22%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEM----------LLKGFA 119
G M A VFD++ + TWNVMI G T G E AL ++M ++ G+A
Sbjct: 172 GNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYA 231
Query: 120 ----------------------PDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWG-D 156
P++ T ++ A +VHA K F D
Sbjct: 232 RVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCD 291
Query: 157 TYVQNTMMNFYFKCGNEEDGCKVFDKMRGC--SVVSWTTLIAGLIACGKVDRAREVFDEM 214
V N++++ Y KCG + K F ++ ++VSWTT+I+
Sbjct: 292 IRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAF---------------- 335
Query: 215 PSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGK 274
I G K EA +F+ M+ ++PN T++S+++AC+ G L +
Sbjct: 336 ----------AIHGMGK-----EAVSMFKDMERLGLKPNRVTMISVLNACSH-GGLAEEE 379
Query: 275 WIHDY-AIKNGIELGPFLG--TALIDMYSKCGSLDDA-WIVFGIMTERNLATWNTMITSL 330
++ + + N ++ P + L+DM + G L++A I I E W ++ +
Sbjct: 380 FLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGAC 439
Query: 331 GVHG---LSEEALDLFKEMEKAN 350
V+ L+E E+E+++
Sbjct: 440 SVYDDAELAERVTRKLMELERSH 462
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 148/249 (59%), Gaps = 2/249 (0%)
Query: 156 DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMP 215
D + NTM++ Y + GN + +FD+M V+SW T++ G G ++ VFD+MP
Sbjct: 89 DIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMP 148
Query: 216 SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE-NVRPNEFTLVSLVSACTEMGSLKLGK 274
+NV SW +I GY + R E F+ M E +V PN+ T+ ++SAC ++G+ GK
Sbjct: 149 ERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGK 208
Query: 275 WIHDYAIKNGI-ELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVH 333
W+H Y G ++ + ALIDMY KCG+++ A VF + R+L +WNTMI L H
Sbjct: 209 WVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAH 268
Query: 334 GLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEH 393
G EAL+LF EM+ + + PD VTFVGVL AC HM VE+G YF+ M + I P +EH
Sbjct: 269 GHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEH 328
Query: 394 YVCMVELYT 402
C+V+L +
Sbjct: 329 CGCVVDLLS 337
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 128/300 (42%), Gaps = 46/300 (15%)
Query: 62 LLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKG-FAP 120
+L+ G M VFD + + F+WN +I+G +G L FK M+ +G P
Sbjct: 127 VLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVP 186
Query: 121 DKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWG-DTYVQNTMMNFYFKCGNEEDGCKV 179
+ T V+ AC AFDFG+ VH + + D V+N +++ Y KCG E +V
Sbjct: 187 NDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEV 246
Query: 180 FDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAF 239
F ++ ++SW T+I GL A G EA
Sbjct: 247 FKGIKRRDLISWNTMINGLAAHG-------------------------------HGTEAL 275
Query: 240 DLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG-----KWIHDYAIKNGIELGPFLGTA 294
+LF M+ + P++ T V ++ AC MG ++ G D++I IE
Sbjct: 276 NLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIE----HCGC 331
Query: 295 LIDMYSKCGSLDDAWIVFGIM-TERNLATWNTMITSLGVH---GLSEEALDLFKEMEKAN 350
++D+ S+ G L A M + + W T++ + V+ + E AL+ ++E N
Sbjct: 332 VVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRN 391
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 86/199 (43%), Gaps = 40/199 (20%)
Query: 178 KVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVE 237
KVF +M +VV WT++I G + + AR FD P +++V W MI GY++ +E
Sbjct: 49 KVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLE 108
Query: 238 AFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALID 297
A LF+ M +V W +++
Sbjct: 109 ARSLFDQMPCRDVMS----------------------W-----------------NTVLE 129
Query: 298 MYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEM-EKANVVPDAV 356
Y+ G ++ VF M ERN+ +WN +I +G E L FK M ++ +VVP+
Sbjct: 130 GYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDA 189
Query: 357 TFVGVLSACVHMHDVEEGE 375
T VLSAC + + G+
Sbjct: 190 TMTLVLSACAKLGAFDFGK 208
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 76/193 (39%), Gaps = 34/193 (17%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVI 129
G + A VF I D +WN MI G G AL LF EM G +PDK T+ V+
Sbjct: 238 GAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVL 297
Query: 130 KACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV 189
AC + G A Y + +F E GC
Sbjct: 298 CACKHMGLVEDGLA--------------YFNSMFTDFSIMPEIEHCGC------------ 331
Query: 190 SWTTLIAGLIACGKVDRAREVFDEMPSK-NVVSWTAMIDGYVKCQRPVEAFD--LFEGMQ 246
++ L G + +A E ++MP K + V W ++ G K + V+ + L E ++
Sbjct: 332 ----VVDLLSRAGFLTQAVEFINKMPVKADAVIWATLL-GASKVYKKVDIGEVALEELIK 386
Query: 247 IENVRPNEFTLVS 259
+E P F ++S
Sbjct: 387 LEPRNPANFVMLS 399
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 178/375 (47%), Gaps = 34/375 (9%)
Query: 31 LENCCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS 87
L+ C L+ Q+H +II++ + + L+ GK++ A + + D
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 556
Query: 88 FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHAL 147
+W MI G T + AL F++ML +G D+ + AC A G+ +HA
Sbjct: 557 VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQ 616
Query: 148 AIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRA 207
A F D QN ++ Y +CG K++ +
Sbjct: 617 ACVSGFSSDLPFQNALVTLYSRCG-------------------------------KIEES 645
Query: 208 REVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEM 267
F++ + + ++W A++ G+ + EA +F M E + N FT S V A +E
Sbjct: 646 YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET 705
Query: 268 GSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMI 327
++K GK +H K G + + ALI MY+KCGS+ DA F ++ +N +WN +I
Sbjct: 706 ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAII 765
Query: 328 TSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGI 387
+ HG EALD F +M +NV P+ VT VGVLSAC H+ V++G YF M YG+
Sbjct: 766 NAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGL 825
Query: 388 SPILEHYVCMVELYT 402
SP EHYVC+V++ T
Sbjct: 826 SPKPEHYVCVVDMLT 840
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 195/449 (43%), Gaps = 71/449 (15%)
Query: 37 FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRG 96
F ++Q+H RI+ GL V+ L+ G ++ A VFD + D +W MI G
Sbjct: 203 FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG 262
Query: 97 CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGD 156
+ + A+ LF +M + G P + + V+ AC + + G +H L +K+ F D
Sbjct: 263 LSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD 322
Query: 157 TYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEM-- 214
TYV N +++ YF GN +F M V++ TLI GL CG ++A E+F M
Sbjct: 323 TYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHL 382
Query: 215 ----PSKNVV--------------------SWT-------------AMIDGYVKCQRPVE 237
P N + ++T A+++ Y KC
Sbjct: 383 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442
Query: 238 AFD-------------------------------LFEGMQIENVRPNEFTLVSLVSACTE 266
A D +F MQIE + PN++T S++ C
Sbjct: 443 ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 502
Query: 267 MGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTM 326
+G L+LG+ IH IK +L ++ + LIDMY+K G LD AW + +++ +W TM
Sbjct: 503 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM 562
Query: 327 ITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYG 386
I + ++AL F++M + D V +SAC + ++EG++ + G
Sbjct: 563 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-G 621
Query: 387 ISPILEHYVCMVELYTGDSELDEVYTSEE 415
S L +V LY+ +++E Y + E
Sbjct: 622 FSSDLPFQNALVTLYSRCGKIEESYLAFE 650
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 153/343 (44%), Gaps = 31/343 (9%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+Q+H + G + + LL + A F + + WNVM+ L
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
++ +F++M ++ P+++TYP ++K CI + G +H+ IK F + YV
Sbjct: 469 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVC 528
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
+ +++ Y K G K+D A ++ K+VV
Sbjct: 529 SVLIDMYAKLG-------------------------------KLDTAWDILIRFAGKDVV 557
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
SWT MI GY + +A F M +R +E L + VSAC + +LK G+ IH A
Sbjct: 558 SWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQA 617
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEAL 340
+G AL+ +YS+CG ++++++ F + WN +++ G +EEAL
Sbjct: 618 CVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEAL 677
Query: 341 DLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTE 383
+F M + + + TF + A ++++G++ +++T+
Sbjct: 678 RVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITK 720
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 153/326 (46%), Gaps = 32/326 (9%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+++H +I++ GL + L KL G + A VFD++ FTWN MI+
Sbjct: 105 RKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASR 164
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACI-ASNAFDFGRAVHALAIKMRFWGDTYV 159
LF M+ + P++ T+ V++AC S AFD +HA + T V
Sbjct: 165 NLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVV 224
Query: 160 QNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNV 219
N +++ Y + G + +VFD +R SW +I+GL SKN
Sbjct: 225 CNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGL-----------------SKN- 266
Query: 220 VSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDY 279
+C+ EA LF M + + P + S++SAC ++ SL++G+ +H
Sbjct: 267 -----------ECE--AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 280 AIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEA 339
+K G ++ AL+ +Y G+L A +F M++R+ T+NT+I L G E+A
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 340 LDLFKEMEKANVVPDAVTFVGVLSAC 365
++LFK M + PD+ T ++ AC
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVAC 399
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 141/340 (41%), Gaps = 66/340 (19%)
Query: 37 FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRG 96
K+ +Q+H + SG + D L+ GK+ + L F+Q A D+ WN ++ G
Sbjct: 607 LKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSG 666
Query: 97 CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGD 156
SG+ E AL +F M +G + FT+ +KA + G+ VHA+ K + +
Sbjct: 667 FQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSE 726
Query: 157 TYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPS 216
T V N +++ Y KCG+ D K F ++ + VSW +I
Sbjct: 727 TEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAII--------------------- 765
Query: 217 KNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG-KW 275
+ Y K EA D F+ M NVRPN TLV ++SAC+ +G + G +
Sbjct: 766 ----------NAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 815
Query: 276 IHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGL 335
+ G+ P ++DM ++ G L
Sbjct: 816 FESMNSEYGLSPKPEHYVCVVDMLTRAGLLS----------------------------- 846
Query: 336 SEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGE 375
A + +EM + PDA+ + +LSACV ++E GE
Sbjct: 847 --RAKEFIQEMP---IKPDALVWRTLLSACVVHKNMEIGE 881
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 132/292 (45%), Gaps = 42/292 (14%)
Query: 116 KGFAPDKFTYPFVIKACIASN-AFDFGRAVHALAIKMRFWGDTYVQNTMMNFY-FKCGNE 173
+G P+ T ++++ C+ +N + D GR +H+ +K+ + + + +FY FK
Sbjct: 78 RGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK---- 133
Query: 174 EDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQ 233
G + A +VFDEMP + + +W MI
Sbjct: 134 ----------------------------GDLYGAFKVFDEMPERTIFTWNKMIKELASRN 165
Query: 234 RPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG--KWIHDYAIKNGIELGPFL 291
E F LF M ENV PNE T ++ AC GS+ + IH + G+ +
Sbjct: 166 LIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-RGGSVAFDVVEQIHARILYQGLRDSTVV 224
Query: 292 GTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANV 351
LID+YS+ G +D A VF + ++ ++W MI+ L + EA+ LF +M +
Sbjct: 225 CNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGI 284
Query: 352 VPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVC--MVELY 401
+P F VLSAC + +E GE+ L+ + G S + YVC +V LY
Sbjct: 285 MPTPYAFSSVLSACKKIESLEIGEQLHGLVLK-LGFSS--DTYVCNALVSLY 333
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Query: 247 IEN--VRPNEFTLVSLVSACTEM-GSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCG 303
+EN +RPN TL L+ C + GSL G+ +H +K G++ L L D Y G
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 304 SLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLS 363
L A+ VF M ER + TWN MI L L E LF M NV P+ TF GVL
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 364 AC 365
AC
Sbjct: 195 AC 196
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 79/210 (37%), Gaps = 31/210 (14%)
Query: 22 FDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQ 81
F A+ N KQ KQVH I ++G + + L+ G ++ A F +
Sbjct: 693 FTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLE 752
Query: 82 INAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFG 141
++ + +WN +I + G AL F +M+ P+ T V+ AC D G
Sbjct: 753 VSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKG 812
Query: 142 RAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIAC 201
A YF+ N E G + C V T AGL++
Sbjct: 813 IA-----------------------YFESMNSEYGLSPKPEHYVCVVDMLTR--AGLLS- 846
Query: 202 GKVDRAREVFDEMPSK-NVVSWTAMIDGYV 230
RA+E EMP K + + W ++ V
Sbjct: 847 ----RAKEFIQEMPIKPDALVWRTLLSACV 872
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 212/426 (49%), Gaps = 50/426 (11%)
Query: 36 NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIR 95
+F +Q+H + +G + D + ++L + ++ ++FD++ D ++NV+I
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS 324
Query: 96 GCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASN--AFDFGRAVHALAIKMRF 153
+ + E +L F+EM GF D+ +PF IA+N + GR +H A+
Sbjct: 325 SYSQADQYEASLHFFREMQCMGF--DRRNFPFATMLSIAANLSSLQMGRQLHCQALLATA 382
Query: 154 WGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDE 213
+V N++++ Y KC ++F++ A +F
Sbjct: 383 DSILHVGNSLVDMYAKC-------EMFEE------------------------AELIFKS 411
Query: 214 MPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG 273
+P + VSWTA+I GYV+ LF M+ N+R ++ T +++ A SL LG
Sbjct: 412 LPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLG 471
Query: 274 KWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVH 333
K +H + I++G F G+ L+DMY+KCGS+ DA VF M +RN +WN +I++ +
Sbjct: 472 KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADN 531
Query: 334 GLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEH 393
G E A+ F +M ++ + PD+V+ +GVL+AC H VE+G YF M+ YGI+P +H
Sbjct: 532 GDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKH 591
Query: 394 YVCMVELYTGDS--------------ELDEVYTSEEAMSLSMKTNQNVVELLQESKLTSV 439
Y CM++L + E DE+ S + + NQ++ E E KL S+
Sbjct: 592 YACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAE-KLFSM 650
Query: 440 DDIKEV 445
+ +++
Sbjct: 651 EKLRDA 656
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 123/243 (50%), Gaps = 4/243 (1%)
Query: 142 RAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIAC 201
R V A IK F DT N ++ + G KV+D+M + VS T+I+G +
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 202 GKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN--VRPNEFTLVS 259
G V AR++FD MP + VV+WT ++ Y + EAF LF M + P+ T +
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 260 LVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTA--LIDMYSKCGSLDDAWIVFGIMTE 317
L+ C + +H +A+K G + PFL + L+ Y + LD A ++F + E
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 318 RNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERY 377
++ T+NT+IT GL E++ LF +M ++ P TF GVL A V +HD G++
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 378 FSL 380
+L
Sbjct: 273 HAL 275
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 153/375 (40%), Gaps = 66/375 (17%)
Query: 37 FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRG 96
F ++V RII++G D +++ G+++ A V+D++ ++ + N MI G
Sbjct: 29 FLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISG 88
Query: 97 CTLSGSPEHALVLFKEM---------LLKGF------------------------APDKF 123
+G A LF M +L G+ PD
Sbjct: 89 HVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHV 148
Query: 124 TYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTY--VQNTMMNFYFKCGNEEDGCKVFD 181
T+ ++ C + + VHA A+K+ F + + V N ++ Y C+V
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSY---------CEV-- 197
Query: 182 KMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDL 241
++D A +F+E+P K+ V++ +I GY K E+ L
Sbjct: 198 --------------------RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHL 237
Query: 242 FEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSK 301
F M+ +P++FT ++ A + LG+ +H ++ G +G ++D YSK
Sbjct: 238 FLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSK 297
Query: 302 CGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGV 361
+ + ++F M E + ++N +I+S E +L F+EM+ F +
Sbjct: 298 HDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATM 357
Query: 362 LSACVHMHDVEEGER 376
LS ++ ++ G +
Sbjct: 358 LSIAANLSSLQMGRQ 372
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 187/371 (50%), Gaps = 8/371 (2%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+Q+HG +I++G VL L+ G + + L FD I + WN ++ G
Sbjct: 336 RQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK 395
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
P L LF +ML GF P ++T+ +K+C + + +H++ ++M + + YV
Sbjct: 396 DGPI-CLSLFLQMLQMGFRPTEYTFSTALKSCCVTEL----QQLHSVIVRMGYEDNDYVL 450
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIAC-GKVDRAREVFDEMPSKNV 219
+++M Y K D + D G + V ++AG+ + G+ + ++ + +
Sbjct: 451 SSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDT 510
Query: 220 VSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDY 279
VSW I + E +LF+ M N+RP+++T VS++S C+++ L LG IH
Sbjct: 511 VSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGL 570
Query: 280 AIKNGIELG-PFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEE 338
K F+ LIDMY KCGS+ VF E+NL TW +I+ LG+HG +E
Sbjct: 571 ITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQE 630
Query: 339 ALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMV 398
AL+ FKE PD V+F+ +L+AC H V+EG F M + YG+ P ++HY C V
Sbjct: 631 ALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAV 689
Query: 399 ELYTGDSELDE 409
+L + L E
Sbjct: 690 DLLARNGYLKE 700
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 143/327 (43%), Gaps = 37/327 (11%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNY---ASLVFDQINAPDSFTWNVMIRGCT 98
Q+HG ++ GL + L C YG+++ A VF+ + TWN M+
Sbjct: 134 QLHGLSLKYGLFMADAFVGTCLL--CLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLG 191
Query: 99 LSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTY 158
G + + F+E++ G + + ++ V+K D + +H A K +
Sbjct: 192 HRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEIS 251
Query: 159 VQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKN 218
V N++++ Y KC G A +F + S +
Sbjct: 252 VVNSLISAYGKC-------------------------------GNTHMAERMFQDAGSWD 280
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
+VSW A+I K + P++A LF M PN+ T VS++ + + L G+ IH
Sbjct: 281 IVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHG 340
Query: 279 YAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEE 338
IKNG E G LG ALID Y+KCG+L+D+ + F + ++N+ WN +++ +
Sbjct: 341 MLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPI 399
Query: 339 ALDLFKEMEKANVVPDAVTFVGVLSAC 365
L LF +M + P TF L +C
Sbjct: 400 CLSLFLQMLQMGFRPTEYTFSTALKSC 426
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 153/377 (40%), Gaps = 72/377 (19%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
KQ+H + GL + ++ L+ G + A +F + D +WN +I S
Sbjct: 235 KQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKS 294
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
+P AL LF M GF+P++ TY V+ GR +H + IK +
Sbjct: 295 ENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLG 354
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N +++FY KCGN ED FD +R ++V W
Sbjct: 355 NALIDFYAKCGNLEDSRLCFDYIRDKNIVCW----------------------------- 385
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSAC--TEMGSLKLGKWIHD 278
A++ GY P+ LF M RP E+T + + +C TE+ L H
Sbjct: 386 --NALLSGYANKDGPI-CLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQL------HS 436
Query: 279 YAIKNGIELGPFLGTALIDMYSKCGSLDDA-----W-----------IVFGIMTER---- 318
++ G E ++ ++L+ Y+K ++DA W IV GI + R
Sbjct: 437 VIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYH 496
Query: 319 ------------NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACV 366
+ +WN I + EE ++LFK M ++N+ PD TFV +LS C
Sbjct: 497 ESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCS 556
Query: 367 HMHDVEEGERYFSLMTE 383
+ D+ G L+T+
Sbjct: 557 KLCDLTLGSSIHGLITK 573
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 112/260 (43%), Gaps = 38/260 (14%)
Query: 30 TLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFD--------- 80
L++CC +L+Q+H I+R G + +L L++ MN A L+ D
Sbjct: 422 ALKSCC-VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVV 480
Query: 81 -----------------------QINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKG 117
+ PD+ +WN+ I C+ S E + LFK ML
Sbjct: 481 PLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSN 540
Query: 118 FAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRF-WGDTYVQNTMMNFYFKCGNEEDG 176
PDK+T+ ++ C G ++H L K F DT+V N +++ Y KCG+
Sbjct: 541 IRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSV 600
Query: 177 CKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPS----KNVVSWTAMIDGYVKC 232
KVF++ R ++++WT LI+ L G A E F E S + VS+ +++
Sbjct: 601 MKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHG 660
Query: 233 QRPVEAFDLFEGMQIENVRP 252
E LF+ M+ V P
Sbjct: 661 GMVKEGMGLFQKMKDYGVEP 680
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 119/251 (47%), Gaps = 38/251 (15%)
Query: 128 VIKACIASNAFDFGRAVHALAIKM--RFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRG 185
++ C + +F +A+HAL+I + YV N +++ Y K G
Sbjct: 18 LLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLG-------------- 63
Query: 186 CSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGM 245
+V A +VFD+MP +N VS+ +I GY K +A+ +F M
Sbjct: 64 -----------------EVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEM 106
Query: 246 QIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELG-PFLGTALIDMYSKCGS 304
+ PN+ T+ L+S C + ++ G +H ++K G+ + F+GT L+ +Y +
Sbjct: 107 RYFGYLPNQSTVSGLLS-CASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDL 164
Query: 305 LDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLS- 363
L+ A VF M ++L TWN M++ LG G +E + F+E+ + +F+GVL
Sbjct: 165 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKG 224
Query: 364 -ACVHMHDVEE 373
+CV D+ +
Sbjct: 225 VSCVKDLDISK 235
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 257 LVSLVSACTEMGSLKLGKWIHDYAIK-NGIELGP-FLGTALIDMYSKCGSLDDAWIVFGI 314
+VSL++ C + S K +H +I + L P ++ +I +Y K G + A VF
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 315 MTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEG 374
M ERN ++NT+I +G ++A +F EM +P+ T G+LS C + DV G
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS-CASL-DVRAG 132
Query: 375 ERYFSLMTEHYGISPILEHYVCMVELYTG 403
T+ +G+S L++ + M + + G
Sbjct: 133 -------TQLHGLS--LKYGLFMADAFVG 152
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 178/371 (47%), Gaps = 32/371 (8%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+Q+H +IR+GL + + ++ G + A VFDQ+ ++ G T +
Sbjct: 204 RQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQA 263
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G AL LF +++ +G D F + V+KAC + + G+ +HA K+ + V
Sbjct: 264 GRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVG 323
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
+++FY KC + E C+ F E+ N V
Sbjct: 324 TPLVDFYIKCSSFESACRA-------------------------------FQEIREPNDV 352
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRP-NEFTLVSLVSACTEMGSLKLGKWIHDY 279
SW+A+I GY + + EA F+ ++ +N N FT S+ AC+ + +G +H
Sbjct: 353 SWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHAD 412
Query: 280 AIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEA 339
AIK + + +ALI MYSKCG LDDA VF M ++ W I+ +G + EA
Sbjct: 413 AIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEA 472
Query: 340 LDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVE 399
L LF++M + P++VTF+ VL+AC H VE+G+ M Y ++P ++HY CM++
Sbjct: 473 LRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMID 532
Query: 400 LYTGDSELDEV 410
+Y LDE
Sbjct: 533 IYARSGLLDEA 543
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 136/324 (41%), Gaps = 39/324 (12%)
Query: 17 TPTTRFDSQQALVTLENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMN 73
T +DS V L+ C + ++L KQ+H + + GL + + L+
Sbjct: 278 TEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFE 337
Query: 74 YASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAP-DKFTYPFVIKAC 132
A F +I P+ +W+ +I G E A+ FK + K + + FTY + +AC
Sbjct: 338 SACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQAC 397
Query: 133 IASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWT 192
+ G VHA AIK G Y ++ ++ Y KCG +D +VF+ M +V+WT
Sbjct: 398 SVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWT 457
Query: 193 TLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRP 252
I+G G EA LFE M ++P
Sbjct: 458 AFISGHAYYGNAS-------------------------------EALRLFEKMVSCGMKP 486
Query: 253 NEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLG--TALIDMYSKCGSLDDAWI 310
N T +++++AC+ G ++ GK D ++ + P + +ID+Y++ G LD+A
Sbjct: 487 NSVTFIAVLTACSHAGLVEQGKHCLDTMLRK-YNVAPTIDHYDCMIDIYARSGLLDEALK 545
Query: 311 VFGIMT-ERNLATWNTMITSLGVH 333
M E + +W ++ H
Sbjct: 546 FMKNMPFEPDAMSWKCFLSGCWTH 569
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 121/299 (40%), Gaps = 43/299 (14%)
Query: 106 ALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFW---GDTYVQNT 162
A +EM G + ++Y + +AC + GR +H +MR +QN
Sbjct: 67 AFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD---RMRMGIENPSVLLQNC 123
Query: 163 MMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSW 222
++ Y +C + ED A ++FDEM N VS
Sbjct: 124 VLQMYCECRSLED-------------------------------ADKLFDEMSELNAVSR 152
Query: 223 TAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIK 282
T MI Y + +A LF GM +P +L+ + +L G+ IH + I+
Sbjct: 153 TTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIR 212
Query: 283 NGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDL 342
G+ + T +++MY KCG L A VF M + ++ G + +AL L
Sbjct: 213 AGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKL 272
Query: 343 FKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERY------FSLMTEHYGISPILEHYV 395
F ++ V D+ F VL AC + ++ G++ L +E +P+++ Y+
Sbjct: 273 FVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYI 331
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 74/142 (52%), Gaps = 4/142 (2%)
Query: 237 EAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGP--FLGTA 294
EAF+ + M V + ++ L AC E+ SL G+ +HD ++ GIE P L
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD-RMRMGIE-NPSVLLQNC 123
Query: 295 LIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPD 354
++ MY +C SL+DA +F M+E N + TMI++ G+ ++A+ LF M + P
Sbjct: 124 VLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPP 183
Query: 355 AVTFVGVLSACVHMHDVEEGER 376
+ + +L + V+ ++ G +
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQ 205
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 121/382 (31%), Positives = 199/382 (52%), Gaps = 35/382 (9%)
Query: 37 FKQLKQVHGRIIRSGLTHD-QVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIR 95
++ K VHG +R L + + L L++ GK++ V ++ + WN +I
Sbjct: 319 IREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLIS 378
Query: 96 GCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWG 155
G AL LF++M+ + PD FT I AC + G+ +H I+
Sbjct: 379 LYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-S 437
Query: 156 DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMP 215
D +VQN++++ Y K G+ VD A VF+++
Sbjct: 438 DEFVQNSLIDMYSKSGS-------------------------------VDSASTVFNQIK 466
Query: 216 SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKW 275
++VV+W +M+ G+ + VEA LF+ M + NE T ++++ AC+ +GSL+ GKW
Sbjct: 467 HRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKW 526
Query: 276 IHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGL 335
+H I +G++ F TALIDMY+KCG L+ A VF M+ R++ +W++MI + G+HG
Sbjct: 527 VHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGR 585
Query: 336 SEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYV 395
A+ F +M ++ P+ V F+ VLSAC H VEEG+ YF+LM + +G+SP EH+
Sbjct: 586 IGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFA 644
Query: 396 CMVELYTGDSELDEVYTSEEAM 417
C ++L + +L E Y + + M
Sbjct: 645 CFIDLLSRSGDLKEAYRTIKEM 666
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 161/330 (48%), Gaps = 42/330 (12%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGK---MNYASLVFDQINAPDSFTWNVMIRGCT 98
+VHGRII+ G+ D V+ LL C YG+ ++ A VFD + D W+ ++ C
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLL---CMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCL 178
Query: 99 LSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTY 158
+G AL +FK M+ G PD T V++ C R+VH + F D
Sbjct: 179 ENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDET 238
Query: 159 VQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKN 218
+ N+++ Y KCG+ + + +F+++ KN
Sbjct: 239 LCNSLLTMYSKCGD-------------------------------LLSSERIFEKIAKKN 267
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
VSWTAMI Y + + +A F M + PN TL S++S+C +G ++ GK +H
Sbjct: 268 AVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHG 327
Query: 279 YAIKNGIELGP---FLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGL 335
+A++ EL P L AL+++Y++CG L D V ++++RN+ WN++I+ G+
Sbjct: 328 FAVRR--ELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGM 385
Query: 336 SEEALDLFKEMEKANVVPDAVTFVGVLSAC 365
+AL LF++M + PDA T +SAC
Sbjct: 386 VIQALGLFRQMVTQRIKPDAFTLASSISAC 415
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 194/408 (47%), Gaps = 44/408 (10%)
Query: 26 QALVTLENCCNFKQLKQVHGRIIRSG-LTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA 84
Q + +C + + + Q+H ++ +G L D + + KL++ G + + LVF+
Sbjct: 3 QYMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPY 62
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNA-FDFGRA 143
PDSF + V+I+ + A+ L+ ++ + KF +P V++AC S G
Sbjct: 63 PDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGK 122
Query: 144 VHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGK 203
VH IK D ++ +++ Y + GN D
Sbjct: 123 VHGRIIKGGVDDDAVIETSLLCMYGQTGNLSD---------------------------- 154
Query: 204 VDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSA 263
A +VFD MP +++V+W+ ++ ++ V+A +F+ M + V P+ T++S+V
Sbjct: 155 ---AEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEG 211
Query: 264 CTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATW 323
C E+G L++ + +H + +L L +L+ MYSKCG L + +F + ++N +W
Sbjct: 212 CAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSW 271
Query: 324 NTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERY--FSLM 381
MI+S SE+AL F EM K+ + P+ VT VLS+C + + EG+ F++
Sbjct: 272 TAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVR 331
Query: 382 TEHYGISPILEHY-VCMVELYTGDSELDEVYTSEEAMSLSMKTNQNVV 428
E + P E + +VELY +L + T L + +++N+V
Sbjct: 332 RE---LDPNYESLSLALVELYAECGKLSDCET-----VLRVVSDRNIV 371
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 161/356 (45%), Gaps = 34/356 (9%)
Query: 23 DSQQALVTLENCCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVF 79
D+ + +E C L+ VHG+I R D+ L LL G + + +F
Sbjct: 201 DAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIF 260
Query: 80 DQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFD 139
++I ++ +W MI E AL F EM+ G P+ T V+ +C
Sbjct: 261 EKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIR 320
Query: 140 FGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLI 199
G++VH A++ R Y ++ L+
Sbjct: 321 EGKSVHGFAVR-RELDPNYESLSL-----------------------------ALVELYA 350
Query: 200 ACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVS 259
CGK+ V + +N+V+W ++I Y ++A LF M + ++P+ FTL S
Sbjct: 351 ECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLAS 410
Query: 260 LVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERN 319
+SAC G + LGK IH + I+ + F+ +LIDMYSK GS+D A VF + R+
Sbjct: 411 SISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRS 469
Query: 320 LATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGE 375
+ TWN+M+ +G S EA+ LF M + + + VTF+ V+ AC + +E+G+
Sbjct: 470 VVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGK 525
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 152/338 (44%), Gaps = 44/338 (13%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
KQ+HG +IR+ ++ D+ + L+ G ++ AS VF+QI TWN M+ G + +
Sbjct: 425 KQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQN 483
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G+ A+ LF M ++ T+ VI+AC + + + G+ VH I + D +
Sbjct: 484 GNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLI-ISGLKDLFTD 542
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
+++ Y KCG+ ++ A VF M S+++V
Sbjct: 543 TALIDMYAKCGD-------------------------------LNAAETVFRAMSSRSIV 571
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
SW++MI+ Y R A F M +PNE ++++SAC GS++ GK+ +
Sbjct: 572 SWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM 631
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT-ERNLATWNTMITSLGVHGLSEEA 339
G+ ID+ S+ G L +A+ M + + W +++ +H +
Sbjct: 632 KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIH----QK 687
Query: 340 LDLFKEMEK--ANVVPDAVTFVGVLSACVHMHDVEEGE 375
+D+ K ++ +++V D + +LS EEGE
Sbjct: 688 MDIIKAIKNDLSDIVTDDTGYYTLLSNIY----AEEGE 721
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 191/396 (48%), Gaps = 32/396 (8%)
Query: 46 RIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEH 105
R+ + + V ++ C G++ A +FD++ + TW MI G +G E
Sbjct: 198 RVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFED 257
Query: 106 ALVLFKEMLLKG-FAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMM 164
LF M +G + T + KAC + G +H L +M D ++ N++M
Sbjct: 258 GFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLM 317
Query: 165 NFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTA 224
+ Y K G + VF M+ VSW +LI GL+ ++ A E+F++MP K++VSWT
Sbjct: 318 SMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTD 377
Query: 225 MIDGYV---KCQRPVEAFDL----------------------------FEGMQIENVRPN 253
MI G+ + + VE F + F M + V PN
Sbjct: 378 MIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPN 437
Query: 254 EFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFG 313
+T S++SA + L G IH +K I + +L+ MY KCG+ +DA+ +F
Sbjct: 438 SYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFS 497
Query: 314 IMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEE 373
++E N+ ++NTMI+ +G ++AL LF +E + P+ VTF+ +LSACVH+ V+
Sbjct: 498 CISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDL 557
Query: 374 GERYFSLMTEHYGISPILEHYVCMVELYTGDSELDE 409
G +YF M Y I P +HY CMV+L LD+
Sbjct: 558 GWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDD 593
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 157/313 (50%), Gaps = 27/313 (8%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRG-----CTLSGSPEHALVLFKEMLLKGFAPDK-- 122
GKM+ A VFD++ + ++N MI C L + E LF ++ P+K
Sbjct: 95 GKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYE----LFCDI------PEKNA 144
Query: 123 FTYPFVIKACIASNAFDFGRAVHA-LAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFD 181
+Y +I + + FD ++A +K R D+ N +++ Y + G + +VF
Sbjct: 145 VSYATMITGFVRAGRFDEAEFLYAETPVKFR---DSVASNVLLSGYLRAGKWNEAVRVFQ 201
Query: 182 KMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDL 241
M VVS ++++ G G++ AR +FD M +NV++WTAMIDGY K + F L
Sbjct: 202 GMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGL 261
Query: 242 FEGMQIE-NVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYS 300
F M+ E +V+ N TL + AC + + G IH + +E FLG +L+ MYS
Sbjct: 262 FLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYS 321
Query: 301 KCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVP-----DA 355
K G + +A VFG+M ++ +WN++IT L EA +LF++M ++V
Sbjct: 322 KLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKG 381
Query: 356 VTFVGVLSACVHM 368
+ G +S CV +
Sbjct: 382 FSGKGEISKCVEL 394
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 171/432 (39%), Gaps = 108/432 (25%)
Query: 21 RFDSQQALVTLENCCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASL 77
+ +S V + C +F + + Q+HG + R L D L L+ G M A
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKA 331
Query: 78 VFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEM----------LLKGFA-------- 119
VF + DS +WN +I G A LF++M ++KGF+
Sbjct: 332 VFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKC 391
Query: 120 ---------PDKFTYPFVIKACIAS--------------------NAFDF---------- 140
D T+ +I A +++ N++ F
Sbjct: 392 VELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASL 451
Query: 141 -----GRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLI 195
G +H +KM D VQN++++ Y KCGN D K+F + ++VS+ T+I
Sbjct: 452 ADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMI 511
Query: 196 AGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEF 255
+G +G+ K +A LF ++ PN
Sbjct: 512 SGY--------------------------SYNGFGK-----KALKLFSMLESSGKEPNGV 540
Query: 256 TLVSLVSACTEMGSLKLGKWIHDYAIKNG--IELGPFLGTALIDMYSKCGSLDDAWIVFG 313
T ++L+SAC +G + LG W + ++K+ IE GP ++D+ + G LDDA +
Sbjct: 541 TFLALLSACVHVGYVDLG-WKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLIS 599
Query: 314 IMT-ERNLATWNTMITSLGVH---GLSEEALDLFKEMEKANVVPDAV-----TFVGVLSA 364
M + + W +++++ H L+E A E+E + P V + +G
Sbjct: 600 TMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRD 659
Query: 365 CVHMHDVEEGER 376
C + ++++ +R
Sbjct: 660 CDRIMNIKKSKR 671
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 27/250 (10%)
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N+ ++ + + GN ++ +F +M S+VSW +I+ GK+ +A +VFDEMP +
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 221 SWTAMIDGYVKCQRPV-EAFDLFEGMQIEN-----------VRPNEFTLVSLVSACTEM- 267
S+ AMI +K + + +A++LF + +N VR F + A T +
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVK 173
Query: 268 ------------GSLKLGKWIHDYAIKNGIELGPFLG-TALIDMYSKCGSLDDAWIVFGI 314
G L+ GKW + G+ + + ++++ Y K G + DA +F
Sbjct: 174 FRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDR 233
Query: 315 MTERNLATWNTMITSLGVHGLSEEALDLFKEM-EKANVVPDAVTFVGVLSACVHMHDVEE 373
MTERN+ TW MI G E+ LF M ++ +V ++ T + AC E
Sbjct: 234 MTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYRE 293
Query: 374 GERYFSLMTE 383
G + L++
Sbjct: 294 GSQIHGLVSR 303
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 181/317 (57%), Gaps = 7/317 (2%)
Query: 90 WNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAI 149
+N +IR +G + +L LF ML P+ T+P +IKA +S + +G A+H A+
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 150 KMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRARE 209
K F D +VQ + + FY + G+ E K+FD + VV+ +L+ G++D A E
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 210 VFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVR----PNEFTLVSLVSACT 265
F MP +VVSWT +I+G+ K +A +F G I+N R PNE T VS++S+C
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVF-GEMIQNERAVITPNEATFVSVLSSCA 232
Query: 266 --EMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATW 323
+ G ++LGK IH Y + I L LGTAL+DMY K G L+ A +F + ++ + W
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 324 NTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTE 383
N +I++L +G ++AL++F+ M+ + V P+ +T + +L+AC V+ G + FS +
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS 352
Query: 384 HYGISPILEHYVCMVEL 400
Y I P EHY C+V+L
Sbjct: 353 EYKIIPTSEHYGCVVDL 369
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 36/209 (17%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFA---PDKFTYP 126
G+M+YA F ++ D +W +I G + G AL++F EM+ A P++ T+
Sbjct: 166 GEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFV 225
Query: 127 FVIKAC--IASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMR 184
V+ +C G+ +H + T + +++ Y K G+ E +FD++R
Sbjct: 226 SVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIR 285
Query: 185 GCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEG 244
V +W +I+ L + G+ +A E+F+ M S
Sbjct: 286 DKKVCAWNAIISALASNGRPKQALEMFEMMKS---------------------------- 317
Query: 245 MQIENVRPNEFTLVSLVSACTEMGSLKLG 273
V PN TL+++++AC + LG
Sbjct: 318 ---SYVHPNGITLLAILTACARSKLVDLG 343
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Query: 31 LENCCNFKQL-----KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAP 85
L +C NF Q KQ+HG ++ + L LL G + A +FDQI
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDK 287
Query: 86 DSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFG 141
WN +I +G P+ AL +F+ M P+ T ++ AC S D G
Sbjct: 288 KVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLG 343
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 191 bits (486), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 200/402 (49%), Gaps = 40/402 (9%)
Query: 31 LENCCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS 87
L++C + LK Q+HG + + + ++ LL GKM A L FD + D
Sbjct: 120 LKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDL 179
Query: 88 FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHAL 147
+WN MI G T + + + LF+ ML +G PD FT+ +++A I + +H L
Sbjct: 180 VSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGL 239
Query: 148 AIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRA 207
AIK+ F + + +++N Y KCG+ + K+ + +
Sbjct: 240 AIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTK----------------------- 276
Query: 208 REVFDEMPSKNVVSWTAMIDGYVKCQR-PVEAFDLFEGMQIENVRPNEFTLVSLVSACTE 266
++++S TA+I G+ + +AFD+F+ M + +E + S++ CT
Sbjct: 277 --------KRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTT 328
Query: 267 MGSLKLGKWIHDYAIKNG-IELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNT 325
+ S+ +G+ IH +A+K+ I LG +LIDMY+K G ++DA + F M E+++ +W +
Sbjct: 329 IASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTS 388
Query: 326 MITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHY 385
+I G HG E+A+DL+ ME + P+ VTF+ +LSAC H E G + + M +
Sbjct: 389 LIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKH 448
Query: 386 GISPILEHYVCMVELYTGDSELDEVY----TSEEAMSLSMKT 423
GI EH C++++ L+E Y + E +SLS T
Sbjct: 449 GIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSST 490
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 93/165 (56%)
Query: 202 GKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLV 261
G V AR++FD + ++VVSWTAMI + +C +A LF+ M E+V+ N+FT S++
Sbjct: 61 GDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVL 120
Query: 262 SACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLA 321
+C ++G LK G IH K + +AL+ +Y++CG +++A + F M ER+L
Sbjct: 121 KSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLV 180
Query: 322 TWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACV 366
+WN MI + ++ + LF+ M PD TF +L A +
Sbjct: 181 SWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASI 225
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 191 bits (486), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 180/325 (55%), Gaps = 7/325 (2%)
Query: 75 ASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIA 134
A FD++ +WN M+ G +G E AL LF +ML G P++ T+ VI AC
Sbjct: 217 ARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSF 276
Query: 135 SNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM-RGCSVVSWTT 193
R++ L + R + +V+ +++ + KC + + ++F+++ ++V+W
Sbjct: 277 RADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNA 336
Query: 194 LIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGM-QIENVRP 252
+I+G G + AR++FD MP +NVVSW ++I GY + A + FE M + +P
Sbjct: 337 MISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKP 396
Query: 253 NEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVF 312
+E T++S++SAC M L+LG I DY KN I+L +LI MY++ G+L +A VF
Sbjct: 397 DEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVF 456
Query: 313 GIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVE 372
M ER++ ++NT+ T+ +G E L+L +M+ + PD VT+ VL+AC ++
Sbjct: 457 DEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLK 516
Query: 373 EGERYFSLMTEHYGISPILEHYVCM 397
EG+R F + +P+ +HY CM
Sbjct: 517 EGQRIFKSIR-----NPLADHYACM 536
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/405 (31%), Positives = 180/405 (44%), Gaps = 71/405 (17%)
Query: 37 FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMN--YASLVFDQINAPDSFTWNVMI 94
F QL Q+H ++I Q + C + Y L+FD + P+ F N M
Sbjct: 19 FPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMF 78
Query: 95 RGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFW 154
+ + L L+++ G PD F++P VIK+ A FG AL K+ F+
Sbjct: 79 KYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKS-----AGRFGILFQALVEKLGFF 133
Query: 155 GDTYVQNTMMNFY-------------------------------FKCGNEEDGCKVFDKM 183
D YV+N +M+ Y +K GN+E+ CK+FD M
Sbjct: 134 KDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMM 193
Query: 184 RGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFE 243
VVSWT +I G ++ AR+ FD MP K+VVSW AM+ GY + +A LF
Sbjct: 194 PENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFN 253
Query: 244 GMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCG 303
M VRPNE T V ++SAC+ L + + + + L F+ TAL+DM++KC
Sbjct: 254 DMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCR 313
Query: 304 SLDDAWIVFG-IMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVV---------- 352
+ A +F + T+RNL TWN MI+ G A LF M K NVV
Sbjct: 314 DIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYA 373
Query: 353 ----------------------PDAVTFVGVLSACVHMHDVEEGE 375
PD VT + VLSAC HM D+E G+
Sbjct: 374 HNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGD 418
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 105/253 (41%), Gaps = 36/253 (14%)
Query: 34 CCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVM 93
C + + +++ + G + V ++ G M+ A +FD + + +WN +
Sbjct: 312 CRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSL 368
Query: 94 IRGCTLSGSPEHALVLFKEMLLKGFA-PDKFTYPFVIKACIASNAFDFGRAVHALAIKMR 152
I G +G A+ F++M+ G + PD+ T V+ AC + G + K +
Sbjct: 369 IAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQ 428
Query: 153 FWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFD 212
+ +++ Y + GN + +VFD+M+ VVS+ TL A G
Sbjct: 429 IKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANG---------- 478
Query: 213 EMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKL 272
DG VE +L M+ E + P+ T S+++AC G LK
Sbjct: 479 --------------DG-------VETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKE 517
Query: 273 GKWIHDYAIKNGI 285
G+ I +I+N +
Sbjct: 518 GQRIFK-SIRNPL 529
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 14/196 (7%)
Query: 198 LIACGKVDRA-----REVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRP 252
+I+C RA R +FD + NV +M + K + L+E + P
Sbjct: 45 IISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMP 104
Query: 253 NEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVF 312
+ F+ ++ + G L K G P++ ++DMY K S++ A VF
Sbjct: 105 DAFSFPVVIKSAGRFGIL-----FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVF 159
Query: 313 GIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVE 372
+++R + WN MI+ G EEA LF M + +VV V G + D+E
Sbjct: 160 DQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGF----AKVKDLE 215
Query: 373 EGERYFSLMTEHYGIS 388
+YF M E +S
Sbjct: 216 NARKYFDRMPEKSVVS 231
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 191 bits (486), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 178/381 (46%), Gaps = 33/381 (8%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQ--INAPDSFTWNVMIRGCT 98
+Q+H + + G + +L L+ C G + A VF++ ++ S +N +I G T
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYT 132
Query: 99 LSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTY 158
+ A +F+ M G + D T ++ C GR++H +K +
Sbjct: 133 ANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVA 192
Query: 159 VQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKN 218
V N+ + Y KCG+ E G R +FDEMP K
Sbjct: 193 VLNSFITMYMKCGSVEAG-------------------------------RRLFDEMPVKG 221
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
+++W A+I GY + + +L+E M+ V P+ FTLVS++S+C +G+ K+G +
Sbjct: 222 LITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGK 281
Query: 279 YAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEE 338
NG F+ A I MY++CG+L A VF IM ++L +W MI G+HG+ E
Sbjct: 282 LVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEI 341
Query: 339 ALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMV 398
L LF +M K + PD FV VLSAC H ++G F M Y + P EHY C+V
Sbjct: 342 GLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLV 401
Query: 399 ELYTGDSELDEVYTSEEAMSL 419
+L LDE E+M +
Sbjct: 402 DLLGRAGRLDEAMEFIESMPV 422
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 137/287 (47%), Gaps = 29/287 (10%)
Query: 82 INAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFG 141
+ A S WNV +R ++ L++ ML G +PD F++PF++K+C + + G
Sbjct: 13 VAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSG 72
Query: 142 RAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIAC 201
+ +H K + +V +++ Y KCG D KVF++
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEE------------------- 113
Query: 202 GKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLV 261
+ S+ V + A+I GY + +A +F M+ V + T++ LV
Sbjct: 114 ----------NPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLV 163
Query: 262 SACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLA 321
CT L LG+ +H +K G++ + + I MY KCGS++ +F M + L
Sbjct: 164 PLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLI 223
Query: 322 TWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHM 368
TWN +I+ +GL+ + L+L+++M+ + V PD T V VLS+C H+
Sbjct: 224 TWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHL 270
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 174/322 (54%), Gaps = 7/322 (2%)
Query: 101 GSPEHALVLFKEMLLKGFAP-DKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYV 159
G+ E AL LF +M P D + +K+C A+ G +VHA ++K F + +V
Sbjct: 26 GNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFV 85
Query: 160 QNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVF---DEMPS 216
+++ Y KC + K+FD++ + V W +I+ CGKV A E++ D MP
Sbjct: 86 GCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMP- 144
Query: 217 KNVVSWTAMIDGYVKCQR-PVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKW 275
N S+ A+I G V + A + + M +PN TL++LVSAC+ +G+ +L K
Sbjct: 145 -NESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKE 203
Query: 276 IHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGL 335
IH YA +N IE P L + L++ Y +CGS+ +VF M +R++ W+++I++ +HG
Sbjct: 204 IHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGD 263
Query: 336 SEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYV 395
+E AL F+EME A V PD + F+ VL AC H +E YF M YG+ +HY
Sbjct: 264 AESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYS 323
Query: 396 CMVELYTGDSELDEVYTSEEAM 417
C+V++ + +E Y +AM
Sbjct: 324 CLVDVLSRVGRFEEAYKVIQAM 345
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 103/239 (43%), Gaps = 21/239 (8%)
Query: 28 LVTLENCCN----FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQIN 83
L+ L + C+ F+ +K++H R+ + L L++ G + Y LVFD +
Sbjct: 185 LLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSME 244
Query: 84 APDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRA 143
D W+ +I L G E AL F+EM L PD + V+KAC S+A G A
Sbjct: 245 DRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKAC--SHA---GLA 299
Query: 144 VHALAIKMRFWGDTYVQNT------MMNFYFKCGNEEDGCKVFDKM-RGCSVVSWTTLIA 196
AL R GD ++ + +++ + G E+ KV M + +W L+
Sbjct: 300 DEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLG 359
Query: 197 GLIACGKVD----RAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVR 251
G+++ ARE+ P +N ++ + Y+ R EA L M+ V+
Sbjct: 360 ACRNYGEIELAEIAARELLMVEP-ENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVK 417
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/377 (33%), Positives = 182/377 (48%), Gaps = 34/377 (9%)
Query: 36 NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS--FTWNVM 93
+ K L+ +H IR G+ + + G ++ A LVF+ I+ D +WN M
Sbjct: 168 SLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSM 227
Query: 94 IRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRF 153
+ ++ G A L+ ML + F PD T+ + +C GR +H+ AI +
Sbjct: 228 FKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGT 287
Query: 154 WGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDE 213
D NT ++ Y K ED C AR +FD
Sbjct: 288 DQDIEAINTFISMYSK---SEDTCS----------------------------ARLLFDI 316
Query: 214 MPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG 273
M S+ VSWT MI GY + EA LF M +P+ TL+SL+S C + GSL+ G
Sbjct: 317 MTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG 376
Query: 274 KWIHDYAIKNGIEL-GPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGV 332
KWI A G + + ALIDMYSKCGS+ +A +F E+ + TW TMI +
Sbjct: 377 KWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYAL 436
Query: 333 HGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILE 392
+G+ EAL LF +M + P+ +TF+ VL AC H +E+G YF +M + Y ISP L+
Sbjct: 437 NGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLD 496
Query: 393 HYVCMVELYTGDSELDE 409
HY CMV+L +L+E
Sbjct: 497 HYSCMVDLLGRKGKLEE 513
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 143/316 (45%), Gaps = 34/316 (10%)
Query: 89 TWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALA 148
WN+ IR P +L+LF+EM GF P+ FT+PFV KAC VHA
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 149 IKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAR 208
IK FW D +V ++ + KC + + KVF++M +W +++G G D+
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDK-- 136
Query: 209 EVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMG 268
AF LF M++ + P+ T+++L+ + +
Sbjct: 137 -----------------------------AFSLFREMRLNEITPDSVTVMTLIQSASFEK 167
Query: 269 SLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT--ERNLATWNTM 326
SLKL + +H I+ G+++ + I Y KCG LD A +VF + +R + +WN+M
Sbjct: 168 SLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSM 227
Query: 327 ITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYG 386
+ V G + +A L+ M + PD TF+ + ++C + + +G R H G
Sbjct: 228 FKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQG-RLIHSHAIHLG 286
Query: 387 ISPILEHYVCMVELYT 402
+E + +Y+
Sbjct: 287 TDQDIEAINTFISMYS 302
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 154/353 (43%), Gaps = 35/353 (9%)
Query: 34 CCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVM 93
CC + VH +I+S D + + ++YA+ VF+++ D+ TWN M
Sbjct: 70 CC-----EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAM 124
Query: 94 IRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRF 153
+ G SG + A LF+EM L PD T +I++ + A+HA+ I++
Sbjct: 125 LSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGV 184
Query: 154 WGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDE 213
V NT ++ Y KCG+ + VF+ +DR
Sbjct: 185 DVQVTVANTWISTYGKCGDLDSAKLVFEA---------------------IDRG------ 217
Query: 214 MPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG 273
+ VVSW +M Y +AF L+ M E +P+ T ++L ++C +L G
Sbjct: 218 --DRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQG 275
Query: 274 KWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVH 333
+ IH +AI G + I MYSK A ++F IMT R +W MI+
Sbjct: 276 RLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEK 335
Query: 334 GLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYG 386
G +EAL LF M K+ PD VT + ++S C +E G ++ + YG
Sbjct: 336 GDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG-KWIDARADIYG 387
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 140/330 (42%), Gaps = 40/330 (12%)
Query: 33 NCCNFKQLKQ---VHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFT 89
+C N + L Q +H I G D + + A L+FD + + +
Sbjct: 265 SCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVS 324
Query: 90 WNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAI 149
W VMI G G + AL LF M+ G PD T +I C + + G+ + A A
Sbjct: 325 WTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARA- 383
Query: 150 KMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRARE 209
D Y GCK D + C+ LI CG + AR+
Sbjct: 384 ------DIY-----------------GCKR-DNVMICN-----ALIDMYSKCGSIHEARD 414
Query: 210 VFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGS 269
+FD P K VV+WT MI GY +EA LF M + +PN T ++++ AC GS
Sbjct: 415 IFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGS 474
Query: 270 LKLGKWIHDYAIKNGIELGPFLG--TALIDMYSKCGSLDDAWIVFGIMTER-NLATWNTM 326
L+ G W + + +K + P L + ++D+ + G L++A + M+ + + W +
Sbjct: 475 LEKG-WEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGAL 533
Query: 327 ITSLGVH---GLSEEALDLFKEMEKANVVP 353
+ + +H ++E+A + +E P
Sbjct: 534 LNACKIHRNVKIAEQAAESLFNLEPQMAAP 563
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 77/147 (52%)
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
+V +W I V PVE+ LF M+ PN FT + AC + + + +H
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSE 337
+ IK+ F+GTA +DM+ KC S+D A VF M ER+ TWN M++ G ++
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 338 EALDLFKEMEKANVVPDAVTFVGVLSA 364
+A LF+EM + PD+VT + ++ +
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQS 162
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 208/422 (49%), Gaps = 60/422 (14%)
Query: 18 PTTRFDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYAS- 76
P RF S + +N Q KQ+H +++ +G HD L KL+ H C+ +S
Sbjct: 6 PGPRFLS----LLQQNSKTLIQAKQIHAQLVING-CHDNSLFGKLIGHYCSKPSTESSSK 60
Query: 77 ----LVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKG--FAPDKFTYPFVI- 129
LVF + PD F +N +++ C+ PE ++ +F K ++ T+ FV+
Sbjct: 61 LAHLLVFPRFGHPDKFLFNTLLK-CS---KPEDSIRIFANYASKSSLLYLNERTFVFVLG 116
Query: 130 --KACIASNAFDFGRAVHALAIKMRF-WGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGC 186
+S+A GR VH + K+ F + + T+++FY K G+
Sbjct: 117 ACARSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGD-------------- 162
Query: 187 SVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQ-----RPVEAFDL 241
+ AR+VFDEMP + V+W AMI GY + +A L
Sbjct: 163 -----------------LRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVL 205
Query: 242 FEGMQI--ENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGI--ELGPFLGTALID 297
F VRP + T+V ++SA ++ G L++G +H Y K G E+ F+GTAL+D
Sbjct: 206 FRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVD 265
Query: 298 MYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVT 357
MYSKCG L++A+ VF +M +N+ TW +M T L ++G E +L M ++ + P+ +T
Sbjct: 266 MYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEIT 325
Query: 358 FVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAM 417
F +LSA H+ VEEG F M +G++P++EHY C+V+L + E Y AM
Sbjct: 326 FTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAM 385
Query: 418 SL 419
+
Sbjct: 386 PI 387
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/466 (29%), Positives = 207/466 (44%), Gaps = 85/466 (18%)
Query: 8 PDANVPHFNTPTTRFDSQQALVTLEN----CCNFKQL---KQVHGRIIRSGLTHDQVLLR 60
P + F+ T F + +TL N C + KQ+H + S + + +
Sbjct: 209 PKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGN 268
Query: 61 KLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLF---------- 110
L+ G M+ A+ VF ++ D +WN M+ G + G E A+ LF
Sbjct: 269 CLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKM 328
Query: 111 -------------------------KEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVH 145
++ML G P++ T V+ C + A G+ +H
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 146 ALAIK----MRFWG---DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGL 198
AIK +R G + V N +++ Y KC
Sbjct: 389 CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCK--------------------------- 421
Query: 199 IACGKVDRAREVFDEMPSK--NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN--VRPNE 254
KVD AR +FD + K +VV+WT MI GY + +A +L M E+ RPN
Sbjct: 422 ----KVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA 477
Query: 255 FTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGP-FLGTALIDMYSKCGSLDDAWIVFG 313
FT+ + AC + +L++GK IH YA++N P F+ LIDMY+KCGS+ DA +VF
Sbjct: 478 FTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFD 537
Query: 314 IMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEE 373
M +N TW +++T G+HG EEAL +F EM + D VT + VL AC H +++
Sbjct: 538 NMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQ 597
Query: 374 GERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
G YF+ M +G+SP EHY C+V+L L+ E M +
Sbjct: 598 GMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPM 643
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 164/337 (48%), Gaps = 35/337 (10%)
Query: 31 LENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS--F 88
+ C Q+K +H +++ G+ L L+ + G +++A + + D+ +
Sbjct: 35 IHKCKTISQVKLIHQKLLSFGILTLN-LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVY 93
Query: 89 TWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALA 148
WN +IR +G L LF M + PD +T+PFV KAC ++ G + HAL+
Sbjct: 94 HWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALS 153
Query: 149 IKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAR 208
+ F + +V N ++ Y +C + D KVFD+M VVSW ++I
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSII------------- 200
Query: 209 EVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE-NVRPNEFTLVSLVSACTEM 267
+ Y K +P A ++F M E RP+ TLV+++ C +
Sbjct: 201 ------------------ESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL 242
Query: 268 GSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMI 327
G+ LGK +H +A+ + + F+G L+DMY+KCG +D+A VF M+ +++ +WN M+
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302
Query: 328 TSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSA 364
G E+A+ LF++M++ + D VT+ +S
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISG 339
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 194 LIAGLIACGKVDRAREVFDEMPSKN--VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVR 251
LI+ I+ G + A + P + V W ++I Y + LF M +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 252 PNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIV 311
P+ +T + AC E+ S++ G+ H ++ G F+G AL+ MYS+C SL DA V
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 312 FGIMTERNLATWNTMITSLGVHGLSEEALDLFKEM-EKANVVPDAVTFVGVLSACVHM-- 368
F M+ ++ +WN++I S G + AL++F M + PD +T V VL C +
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 369 HDVEEGERYFSLMTEHYGISPILEHYV--CMVELYTGDSELDEVYTSEEAMSL 419
H + + F++ +E I +V C+V++Y +DE T MS+
Sbjct: 245 HSLGKQLHCFAVTSEM-----IQNMFVGNCLVDMYAKCGMMDEANTVFSNMSV 292
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 138/341 (40%), Gaps = 71/341 (20%)
Query: 49 RSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAP--DSFTWNVMIRGCTLSGSPEHA 106
++G + +++ +L+ K++ A +FD ++ D TW VMI G + G A
Sbjct: 400 KNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKA 459
Query: 107 LVLFKEMLLKGFA--PDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWG-DTYVQNTM 163
L L EM + P+ FT + AC + A G+ +HA A++ + +V N +
Sbjct: 460 LELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCL 519
Query: 164 MNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWT 223
++ Y KCG+ D AR VFD M +KN V+WT
Sbjct: 520 IDMYAKCGSISD-------------------------------ARLVFDNMMAKNEVTWT 548
Query: 224 AMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG-KWIHDYAIK 282
+++ GY EA +F+ M+ + + TL+ ++ AC+ G + G ++ +
Sbjct: 549 SLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTV 608
Query: 283 NGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDL 342
G+ GP L+D+ + G L+ AL L
Sbjct: 609 FGVSPGPEHYACLVDLLGRAGRLN-------------------------------AALRL 637
Query: 343 FKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTE 383
+EM + P V +V LS C VE GE +TE
Sbjct: 638 IEEMP---MEPPPVVWVAFLSCCRIHGKVELGEYAAEKITE 675
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 191/392 (48%), Gaps = 37/392 (9%)
Query: 31 LENCCNFKQLKQ---VHGRIIRSGLTHDQVLLRKLLQ-HSCAYGKMNYASLVFDQINAPD 86
L++C N K L VHG +++ G+ + ++ ++ M A L+F I +
Sbjct: 118 LKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKN 177
Query: 87 SFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHA 146
TW +I G T G L ++K+MLL+ + ++A + ++ G+ +HA
Sbjct: 178 DVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHA 237
Query: 147 LAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDR 206
IK F + V N++++ Y C+ CG +
Sbjct: 238 SVIKRGFQSNLPVMNSILDLY---------CR----------------------CGYLSE 266
Query: 207 AREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTE 266
A+ F EM K++++W +I + EA +F+ + + PN +T SLV+AC
Sbjct: 267 AKHYFHEMEDKDLITWNTLISELERSDSS-EALLMFQRFESQGFVPNCYTFTSLVAACAN 325
Query: 267 MGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFG-IMTERNLATWNT 325
+ +L G+ +H + G L ALIDMY+KCG++ D+ VFG I+ RNL +W +
Sbjct: 326 IAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTS 385
Query: 326 MITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHY 385
M+ G HG EA++LF +M + + PD + F+ VLSAC H VE+G +YF++M Y
Sbjct: 386 MMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEY 445
Query: 386 GISPILEHYVCMVELYTGDSELDEVYTSEEAM 417
GI+P + Y C+V+L ++ E Y E M
Sbjct: 446 GINPDRDIYNCVVDLLGRAGKIGEAYELVERM 477
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 141/307 (45%), Gaps = 31/307 (10%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVI 129
G + A +FD++ D W MI G S A F EM+ +G +P++FT V+
Sbjct: 59 GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVL 118
Query: 130 KACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV 189
K+C +G VH + +K+ G YV N MMN Y C
Sbjct: 119 KSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATC------------------- 159
Query: 190 SWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN 249
S T A LI F ++ KN V+WT +I G+ + +++ M +EN
Sbjct: 160 SVTMEAACLI-----------FRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLEN 208
Query: 250 VRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAW 309
+ + V A + S+ GK IH IK G + + +++D+Y +CG L +A
Sbjct: 209 AEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAK 268
Query: 310 IVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMH 369
F M +++L TWNT+I+ L S EAL +F+ E VP+ TF +++AC ++
Sbjct: 269 HYFHEMEDKDLITWNTLISELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIA 327
Query: 370 DVEEGER 376
+ G++
Sbjct: 328 ALNCGQQ 334
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 95/178 (53%), Gaps = 3/178 (1%)
Query: 192 TTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVR 251
T LI G V+ AR +FDEMP ++VV+WTAMI GY A++ F M +
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTS 108
Query: 252 PNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCG-SLDDAWI 310
PNEFTL S++ +C M L G +H +K G+E ++ A+++MY+ C +++ A +
Sbjct: 109 PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACL 168
Query: 311 VFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEM--EKANVVPDAVTFVGVLSACV 366
+F + +N TW T+IT G L ++K+M E A V P +T SA +
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASI 226
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 160/286 (55%), Gaps = 34/286 (11%)
Query: 140 FGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLI 199
G +H++ I+ F YVQN++++ Y CG+
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGD--------------------------- 38
Query: 200 ACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVS 259
V A +VFD+MP K++V+W ++I+G+ + +P EA L+ M + ++P+ FT+VS
Sbjct: 39 ----VASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVS 94
Query: 260 LVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERN 319
L+SAC ++G+L LGK +H Y IK G+ L+D+Y++CG +++A +F M ++N
Sbjct: 95 LLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKN 154
Query: 320 LATWNTMITSLGVHGLSEEALDLFKEMEKA-NVVPDAVTFVGVLSACVHMHDVEEGERYF 378
+W ++I L V+G +EA++LFK ME ++P +TFVG+L AC H V+EG YF
Sbjct: 155 SVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYF 214
Query: 379 SLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTN 424
M E Y I P +EH+ CMV+L ++ + Y E S+ M+ N
Sbjct: 215 RRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY--EYIKSMPMQPN 258
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 140/304 (46%), Gaps = 42/304 (13%)
Query: 43 VHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGS 102
+H +IRSG + LL G + A VFD++ D WN +I G +G
Sbjct: 10 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 69
Query: 103 PEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNT 162
PE AL L+ EM KG PD FT ++ AC A G+ VH IK+ + + N
Sbjct: 70 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 129
Query: 163 MMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSW 222
+++ Y +CG E+ +FD+M + VSWT+LI GL
Sbjct: 130 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGL------------------------ 165
Query: 223 TAMIDGYVKCQRPVEAFDLFEGMQ-IENVRPNEFTLVSLVSACTEMGSLKLG-----KWI 276
++G+ K EA +LF+ M+ E + P E T V ++ AC+ G +K G +
Sbjct: 166 --AVNGFGK-----EAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMR 218
Query: 277 HDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT-ERNLATWNTMITSLGVHGL 335
+Y I+ IE G ++D+ ++ G + A+ M + N+ W T++ + VHG
Sbjct: 219 EEYKIEPRIE---HFG-CMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGD 274
Query: 336 SEEA 339
S+ A
Sbjct: 275 SDLA 278
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 1/146 (0%)
Query: 267 MGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTM 326
M ++LG+ IH I++G ++ +L+ +Y+ CG + A+ VF M E++L WN++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 327 ITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYG 386
I +G EEAL L+ EM + PD T V +LSAC + + G+R M + G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VG 119
Query: 387 ISPILEHYVCMVELYTGDSELDEVYT 412
++ L +++LY ++E T
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKT 145
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 119/300 (39%), Gaps = 60/300 (20%)
Query: 15 FNTPTTRFDSQQALVTLENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGK 71
N+ + D + L C L K+VH +I+ GLT + LL G+
Sbjct: 80 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 139
Query: 72 MNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEM-LLKGFAPDKFTYPFVIK 130
+ A +FD++ +S +W +I G ++G + A+ LFK M +G P + T+ ++
Sbjct: 140 VEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILY 199
Query: 131 ACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMR-----G 185
AC CG ++G + F +MR
Sbjct: 200 AC-----------------------------------SHCGMVKEGFEYFRRMREEYKIE 224
Query: 186 CSVVSWTTLIAGLIACGKVDRAREVFDEMPSK-NVVSWTAMIDG-YVKCQRPVEAFDLFE 243
+ + ++ L G+V +A E MP + NVV W ++ V + F +
Sbjct: 225 PRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQ 284
Query: 244 GMQIENVRPNEFTLVSLVSACTEMGSLKLGKW-----IHDYAIKNGIELGPFLGTALIDM 298
+Q+E ++ L+S + A + +W I +++G++ P G +L+++
Sbjct: 285 ILQLEPNHSGDYVLLSNMYASEQ-------RWSDVQKIRKQMLRDGVKKVP--GHSLVEV 335
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 194/384 (50%), Gaps = 27/384 (7%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
K+VH I SG V+ +LL+ G + A VFD++ D +WNVM+ G
Sbjct: 105 KKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEV 164
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G E A LF EM K D +++ ++ + + + +++L + V
Sbjct: 165 GLLEEARKLFDEMTEK----DSYSWTAMVTGYVKKDQPEEALVLYSLMQR--------VP 212
Query: 161 NTMMNFY-----------FKC---GNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDR 206
N+ N + KC G E G V + V+ W++L+ CG +D
Sbjct: 213 NSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVL-WSSLMDMYGKCGCIDE 271
Query: 207 AREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTE 266
AR +FD++ K+VVSWT+MID Y K R E F LF + RPNE+T +++AC +
Sbjct: 272 ARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACAD 331
Query: 267 MGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTM 326
+ + +LGK +H Y + G + F ++L+DMY+KCG+++ A V + +L +W ++
Sbjct: 332 LTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSL 391
Query: 327 ITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYG 386
I +G +EAL F + K+ PD VTFV VLSAC H VE+G +F +TE +
Sbjct: 392 IGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHR 451
Query: 387 ISPILEHYVCMVELYTGDSELDEV 410
+S +HY C+V+L +++
Sbjct: 452 LSHTSDHYTCLVDLLARSGRFEQL 475
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 183/371 (49%), Gaps = 8/371 (2%)
Query: 33 NCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNV 92
N N ++L +HG I++ L+ L++ +V +++ + F +
Sbjct: 2 NHSNARKLTTLHGFILKRNLSSFHASLKRFSDKKFFNPNHEDGGVVVERLCRANRFGEAI 61
Query: 93 MIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMR 152
+ L G + L ++L + P TY +I+ C + A + G+ VH
Sbjct: 62 DV----LCG--QKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSG 115
Query: 153 FWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFD 212
F + N ++ Y KCG+ D KVFD+M + SW ++ G G ++ AR++FD
Sbjct: 116 FVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFD 175
Query: 213 EMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQ-IENVRPNEFTLVSLVSACTEMGSLK 271
EM K+ SWTAM+ GYVK +P EA L+ MQ + N RPN FT+ V+A + ++
Sbjct: 176 EMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIR 235
Query: 272 LGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLG 331
GK IH + ++ G++ L ++L+DMY KCG +D+A +F + E+++ +W +MI
Sbjct: 236 RGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYF 295
Query: 332 VHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPIL 391
E LF E+ + P+ TF GVL+AC + E G++ MT G P
Sbjct: 296 KSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMT-RVGFDPYS 354
Query: 392 EHYVCMVELYT 402
+V++YT
Sbjct: 355 FASSSLVDMYT 365
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 184/364 (50%), Gaps = 38/364 (10%)
Query: 43 VHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRG------ 96
+H + G+ D V+ LL G + A +F + + + T+N MI G
Sbjct: 274 IHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDE 333
Query: 97 CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGD 156
T S E A LF +M +G P T+ V+KAC A+ ++GR +HAL K F D
Sbjct: 334 ITDEASSE-AFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSD 392
Query: 157 TYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPS 216
++ + ++ Y G+ EDG + F
Sbjct: 393 EFIGSALIELYALMGSTEDG-------------------------------MQCFASTSK 421
Query: 217 KNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWI 276
+++ SWT+MID +V+ ++ AFDLF + ++RP E+T+ ++SAC + +L G+ I
Sbjct: 422 QDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQI 481
Query: 277 HDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLS 336
YAIK+GI+ + T+ I MY+K G++ A VF + ++AT++ MI+SL HG +
Sbjct: 482 QGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSA 541
Query: 337 EEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVC 396
EAL++F+ M+ + P+ F+GVL AC H V +G +YF M Y I+P +H+ C
Sbjct: 542 NEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTC 601
Query: 397 MVEL 400
+V+L
Sbjct: 602 LVDL 605
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 169/369 (45%), Gaps = 39/369 (10%)
Query: 16 NTPTTRFDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYA 75
N +F AL C+ + +HG ++ +GL+ L+ L+ GK++ A
Sbjct: 143 NLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQA 202
Query: 76 SLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKAC--- 132
+FD+ + D +WN +I G G+ E L L +M G + V+KAC
Sbjct: 203 MSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCIN 262
Query: 133 IASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWT 192
+ + G A+H K+ D V+ +++ Y K G+ ++ K+F M
Sbjct: 263 LNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLM--------- 313
Query: 193 TLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKC-----QRPVEAFDLFEGMQI 247
PSKNVV++ AMI G+++ + EAF LF MQ
Sbjct: 314 ----------------------PSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQR 351
Query: 248 ENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDD 307
+ P+ T ++ AC+ +L+ G+ IH KN + F+G+ALI++Y+ GS +D
Sbjct: 352 RGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTED 411
Query: 308 AWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVH 367
F +++++A+W +MI + E A DLF+++ +++ P+ T ++SAC
Sbjct: 412 GMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACAD 471
Query: 368 MHDVEEGER 376
+ GE+
Sbjct: 472 FAALSSGEQ 480
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 161/371 (43%), Gaps = 45/371 (12%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
K HG +I+S L LL LL C ++ +A +FD++ + ++N +I G T
Sbjct: 67 KLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQM 126
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G E A+ LF E DKFTY + C D G +H L + ++
Sbjct: 127 GFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLI 186
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N +++ Y KCG + +FD+ VSW +LI+
Sbjct: 187 NVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLIS------------------------ 222
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSAC---TEMGSLKLGKWIH 277
GYV+ E +L M + + + L S++ AC G ++ G IH
Sbjct: 223 -------GYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIH 275
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLG-----V 332
Y K G+E + TAL+DMY+K GSL +A +F +M +N+ T+N MI+
Sbjct: 276 CYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEIT 335
Query: 333 HGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLM------TEHYG 386
S EA LF +M++ + P TF VL AC +E G + +L+ ++ +
Sbjct: 336 DEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFI 395
Query: 387 ISPILEHYVCM 397
S ++E Y M
Sbjct: 396 GSALIELYALM 406
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 127/312 (40%), Gaps = 40/312 (12%)
Query: 29 VTLENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAP 85
V L+ C K L +Q+H I ++ D+ + L++ G F +
Sbjct: 363 VVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQ 422
Query: 86 DSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVH 145
D +W MI + E A LF+++ P+++T ++ AC A G +
Sbjct: 423 DIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQ 482
Query: 146 ALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVD 205
AIK T V+ + ++ Y K GN +
Sbjct: 483 GYAIKSGIDAFTSVKTSSISMYAKSGN-------------------------------MP 511
Query: 206 RAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACT 265
A +VF E+ + +V +++AMI + EA ++FE M+ ++PN+ + ++ AC
Sbjct: 512 LANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACC 571
Query: 266 EMGSLKLG-KWIHDYAIKNGIELGPFLG--TALIDMYSKCGSLDDAW-IVFGIMTERNLA 321
G + G K+ +KN + P T L+D+ + G L DA ++ + +
Sbjct: 572 HGGLVTQGLKYFQ--CMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPV 629
Query: 322 TWNTMITSLGVH 333
TW +++S V+
Sbjct: 630 TWRALLSSCRVY 641
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 84/160 (52%), Gaps = 7/160 (4%)
Query: 260 LVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERN 319
L + GS+ LGK H + IK+ + +L L++MY KC L A +F M ERN
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 112
Query: 320 LATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFS 379
+ ++N++I+ G E+A++LF E +AN+ D T+ G L C D++ GE
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHG 172
Query: 380 LMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
L+ + G+S + ++++Y+ +LD +AMSL
Sbjct: 173 LVVVN-GLSQQVFLINVLIDMYSKCGKLD------QAMSL 205
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 201/390 (51%), Gaps = 12/390 (3%)
Query: 30 TLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFT 89
L C + + Q+H ++SG + + L+ G+ A+ +F+++ T
Sbjct: 138 VLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVT 197
Query: 90 WNVMIRGCTLSGSPEHALVLFKEMLLKGFA---PDKFTYPFVIKACIASNAFDFGRAVHA 146
+N I G +G +F L++ F+ P+ T+ I AC + +GR +H
Sbjct: 198 YNAFISGLMENGVMNLVPSVFN--LMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHG 255
Query: 147 LAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGC-SVVSWTTLIAGLIACGKVD 205
L +K F +T V +++ Y KC + VF +++ +++SW ++I+G++ G+ +
Sbjct: 256 LVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHE 315
Query: 206 RAREVFDEMPSKNV----VSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLV 261
A E+F+++ S+ + +W ++I G+ + + +EAF FE M + P+ L SL+
Sbjct: 316 TAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLL 375
Query: 262 SACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM--TERN 319
SAC+++ +LK GK IH + IK E F+ T+LIDMY KCG A +F ++
Sbjct: 376 SACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKD 435
Query: 320 LATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFS 379
WN MI+ G HG E A+++F+ + + V P TF VLSAC H +VE+G + F
Sbjct: 436 PVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFR 495
Query: 380 LMTEHYGISPILEHYVCMVELYTGDSELDE 409
LM E YG P EH CM++L L E
Sbjct: 496 LMQEEYGYKPSTEHIGCMIDLLGRSGRLRE 525
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 155/335 (46%), Gaps = 38/335 (11%)
Query: 83 NAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFT-------YPFVIKACIAS 135
++P+ FT+ +++ C G +L +++ GF D FT Y V + A
Sbjct: 27 HSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDAL 86
Query: 136 NAFD---------FGRAVHALAIK------MRFWGDTYVQNTMMN------FYFKCGNEE 174
D AV L R +GD V + MN CG+ E
Sbjct: 87 KVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIE 146
Query: 175 DG----CKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYV 230
G C V T+L++ CG+ A +F+++P K+VV++ A I G +
Sbjct: 147 GGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLM 206
Query: 231 K---CQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIEL 287
+ F+L E PN+ T V+ ++AC + +L+ G+ +H +K +
Sbjct: 207 ENGVMNLVPSVFNLMRKFSSEE--PNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQF 264
Query: 288 GPFLGTALIDMYSKCGSLDDAWIVFGIMTE-RNLATWNTMITSLGVHGLSEEALDLFKEM 346
+GTALIDMYSKC A+IVF + + RNL +WN++I+ + ++G E A++LF+++
Sbjct: 265 ETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKL 324
Query: 347 EKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLM 381
+ + PD+ T+ ++S + V E ++F M
Sbjct: 325 DSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM 359
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 135/317 (42%), Gaps = 50/317 (15%)
Query: 70 GKMNYASLVFDQINA----PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTY 125
G+ A +F+++++ PDS TWN +I G + G A F+ ML P
Sbjct: 312 GQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCL 371
Query: 126 PFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRG 185
++ AC G+ +H IK D +V ++++ Y KCG
Sbjct: 372 TSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCG-------------- 417
Query: 186 CSVVSWTTLIAGLIACGKVDRAREVFD--EMPSKNVVSWTAMIDGYVKCQRPVEAFDLFE 243
+ SW AR +FD E K+ V W MI GY K A ++FE
Sbjct: 418 --LSSW---------------ARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFE 460
Query: 244 GMQIENVRPNEFTLVSLVSACTEMGSLKLGKWI-----HDYAIKNGIELGPFLGTALIDM 298
++ E V P+ T +++SAC+ G+++ G I +Y K E +G +ID+
Sbjct: 461 LLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTE---HIG-CMIDL 516
Query: 299 YSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVH---GLSEEALDLFKEMEKANVVPDA 355
+ G L +A V M+E + + +++++ S H L EEA E+E N P
Sbjct: 517 LGRSGRLREAKEVIDQMSEPSSSVYSSLLGSCRQHLDPVLGEEAAMKLAELEPENPAP-F 575
Query: 356 VTFVGVLSACVHMHDVE 372
V + +A DVE
Sbjct: 576 VILSSIYAALERWEDVE 592
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 178/378 (47%), Gaps = 40/378 (10%)
Query: 86 DSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVH 145
D FTW MI G +G AL +F++M L G P+ T + AC + G VH
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 146 ALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVD 205
++A+KM F D V N++++ Y KCG ED KVFD ++ V +W ++I G G
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCG 435
Query: 206 RAREVFDEMPSKN----VVSWTAMIDGYVK-------------------CQRPV------ 236
+A E+F M N +++W MI GY+K QR
Sbjct: 436 KAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLI 495
Query: 237 -----------EAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGI 285
EA +LF MQ PN T++SL+ AC + K+ + IH ++ +
Sbjct: 496 IAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNL 555
Query: 286 ELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKE 345
+ + AL D Y+K G ++ + +F M +++ TWN++I +HG AL LF +
Sbjct: 556 DAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQ 615
Query: 346 MEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDS 405
M+ + P+ T ++ A M +V+EG++ F + Y I P LEH MV LY +
Sbjct: 616 MKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRAN 675
Query: 406 ELDEVYTSEEAMSLSMKT 423
L+E + M++ +T
Sbjct: 676 RLEEALQFIQEMNIQSET 693
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 132/490 (26%), Positives = 219/490 (44%), Gaps = 52/490 (10%)
Query: 28 LVTLENCCNFKQLKQVHGRII--RSGL-THDQVLLR-KLLQHSCAYGKMNYASLVFDQIN 83
L LE+C + + GRI+ R GL T V + KLL G + A VFD +
Sbjct: 85 LKLLESCIDSGSIHL--GRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMR 142
Query: 84 APDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRA 143
+ FTW+ MI + LF+ M+ G PD F +P +++ C + G+
Sbjct: 143 ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKV 202
Query: 144 VHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTT---------- 193
+H++ IK+ V N+++ Y KCG + K F +MR V++W +
Sbjct: 203 IHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGK 262
Query: 194 -------------------------LIAGLIACGKVDRAREVFDEMPS----KNVVSWTA 224
LI G GK D A ++ +M + +V +WTA
Sbjct: 263 HEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTA 322
Query: 225 MIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNG 284
MI G + +A D+F M + V PN T++S VSAC+ + + G +H A+K G
Sbjct: 323 MISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMG 382
Query: 285 IELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFK 344
+G +L+DMYSKCG L+DA VF + +++ TWN+MIT G +A +LF
Sbjct: 383 FIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFT 442
Query: 345 EMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGD 404
M+ AN+ P+ +T+ ++S + D E F M + + + ++ Y +
Sbjct: 443 RMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQN 502
Query: 405 SELDEVYTSEEAMSLS--MKTNQNVVELLQE-SKLTSVDDIKEVINKHYGDLNFSKLDLD 461
+ DE M S M + ++ LL + L ++E+ +G + LD
Sbjct: 503 GKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREI----HGCVLRRNLDAI 558
Query: 462 HSSVSSVPET 471
H+ +++ +T
Sbjct: 559 HAVKNALTDT 568
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 122/263 (46%), Gaps = 40/263 (15%)
Query: 100 SGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFW----G 155
+GS A + +G + TY ++++CI S + GR +HA RF
Sbjct: 59 NGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA-----RFGLFTEP 113
Query: 156 DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMP 215
D +V+ +++ Y KCG D KVFD M R R +F
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSM----------------------RERNLF---- 147
Query: 216 SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKW 275
+W+AMI Y + R E LF M + V P++F ++ C G ++ GK
Sbjct: 148 -----TWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKV 202
Query: 276 IHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGL 335
IH IK G+ + +++ +Y+KCG LD A F M ER++ WN+++ + +G
Sbjct: 203 IHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGK 262
Query: 336 SEEALDLFKEMEKANVVPDAVTF 358
EEA++L KEMEK + P VT+
Sbjct: 263 HEEAVELVKEMEKEGISPGLVTW 285
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 88/175 (50%), Gaps = 6/175 (3%)
Query: 236 VEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGP--FLGT 293
+EA + + + + T + L+ +C + GS+ LG+ +H + G+ P F+ T
Sbjct: 63 LEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILH---ARFGLFTEPDVFVET 119
Query: 294 ALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVP 353
L+ MY+KCG + DA VF M ERNL TW+ MI + E LF+ M K V+P
Sbjct: 120 KLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLP 179
Query: 354 DAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELD 408
D F +L C + DVE G+ S++ + G+S L ++ +Y ELD
Sbjct: 180 DDFLFPKILQGCANCGDVEAGKVIHSVVIK-LGMSSCLRVSNSILAVYAKCGELD 233
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 183/409 (44%), Gaps = 42/409 (10%)
Query: 37 FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRG 96
F K VHG+I+++ D + LLQ G M+ A VF+++ D W+ MI
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 97 CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGD 156
+G A+ LF M P++FT ++ C G +H L +K+ F D
Sbjct: 323 FCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382
Query: 157 TYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPS 216
YV N +++ Y KC K+D A ++F E+ S
Sbjct: 383 IYVSNALIDVYAKCE-------------------------------KMDTAVKLFAELSS 411
Query: 217 KNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWI 276
KN VSW +I GY +AF +F V E T S + AC + S+ LG +
Sbjct: 412 KNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQV 471
Query: 277 HDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLS 336
H AIK + +LIDMY+KCG + A VF M ++A+WN +I+ HGL
Sbjct: 472 HGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLG 531
Query: 337 EEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVC 396
+AL + M+ + P+ +TF+GVLS C + +++G+ F M +GI P LEHY C
Sbjct: 532 RQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTC 591
Query: 397 MVELYTGDSELDEVYTSEEAMS-----------LSMKTNQNVVELLQES 434
MV L +LD+ E + LS NQN E + S
Sbjct: 592 MVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRS 640
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 152/338 (44%), Gaps = 31/338 (9%)
Query: 43 VHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGS 102
+H I++ G + + L+ G ++ A VF+ I D W ++ +G
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 103 PEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNT 162
E +L L M + GF P+ +T+ +KA I AFDF + VH +K + D V
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287
Query: 163 MMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSW 222
++ Y + G+ D KVF+ EMP +VV W
Sbjct: 288 LLQLYTQLGDMSDAFKVFN-------------------------------EMPKNDVVPW 316
Query: 223 TAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIK 282
+ MI + + EA DLF M+ V PNEFTL S+++ C LG+ +H +K
Sbjct: 317 SFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVK 376
Query: 283 NGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDL 342
G +L ++ ALID+Y+KC +D A +F ++ +N +WNT+I G +A +
Sbjct: 377 VGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSM 436
Query: 343 FKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSL 380
F+E + V VTF L AC + ++ G + L
Sbjct: 437 FREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGL 474
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 144/323 (44%), Gaps = 34/323 (10%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+Q+HG +++ G D + L+ KM+ A +F ++++ + +WN +I G
Sbjct: 368 EQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENL 427
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G A +F+E L + + T+ + AC + + D G VH LAIK V
Sbjct: 428 GEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVS 487
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N++++ Y KCG+ + A+ VF+EM + +V
Sbjct: 488 NSLIDMYAKCGD-------------------------------IKFAQSVFNEMETIDVA 516
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
SW A+I GY +A + + M+ + +PN T + ++S C+ G + G+ +
Sbjct: 517 SWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESM 576
Query: 281 IKN-GIELGPFLGTALIDMYSKCGSLDDAW-IVFGIMTERNLATWNTMITSLGVHGLSEE 338
I++ GIE T ++ + + G LD A ++ GI E ++ W M+++ E
Sbjct: 577 IRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEF 636
Query: 339 ALDLFKEMEKANVVPDAVTFVGV 361
A +E+ K N D T+V V
Sbjct: 637 ARRSAEEILKIN-PKDEATYVLV 658
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 122/312 (39%), Gaps = 68/312 (21%)
Query: 121 DKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVF 180
D Y +++ CI N +A+H +K D + N ++N Y K G ++D +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 181 DKMRGCSVVSWTTLIAGLIAC----GKVDRAR---------------EVFDEMPSKNVVS 221
D+M + VS+ TL G AC G R ++F + +
Sbjct: 108 DEMPERNNVSFVTLAQGY-ACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICP 166
Query: 222 W-----------------TAMIDGYVKCQRPVEAFDLFEG-------------------- 244
W A+I+ Y C A +FEG
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENG 226
Query: 245 -----------MQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGT 293
M++ PN +T + + A +G+ K +H +K L P +G
Sbjct: 227 YFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGV 286
Query: 294 ALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVP 353
L+ +Y++ G + DA+ VF M + ++ W+ MI +G EA+DLF M +A VVP
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP 346
Query: 354 DAVTFVGVLSAC 365
+ T +L+ C
Sbjct: 347 NEFTLSSILNGC 358
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 184/381 (48%), Gaps = 34/381 (8%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+ VH +++ + + LL G ++ A VF +++ ++ MI G
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYARE 375
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G A+ LF+EM +G +PD +T V+ C D G+ VH + D +V
Sbjct: 376 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS 435
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N +M+ Y KCG+ ++ A VF EM K+++
Sbjct: 436 NALMDMYAKCGSMQE-------------------------------AELVFSEMRVKDII 464
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVR--PNEFTLVSLVSACTEMGSLKLGKWIHD 278
SW +I GY K EA LF + +E R P+E T+ ++ AC + + G+ IH
Sbjct: 465 SWNTIIGGYSKNCYANEALSLFN-LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 523
Query: 279 YAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEE 338
Y ++NG + +L+DMY+KCG+L A ++F + ++L +W MI G+HG +E
Sbjct: 524 YIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKE 583
Query: 339 ALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMV 398
A+ LF +M +A + D ++FV +L AC H V+EG R+F++M I P +EHY C+V
Sbjct: 584 AIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIV 643
Query: 399 ELYTGDSELDEVYTSEEAMSL 419
++ +L + Y E M +
Sbjct: 644 DMLARTGDLIKAYRFIENMPI 664
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 166/336 (49%), Gaps = 32/336 (9%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+Q+HG I++SG + L+ +++ A VFD++ D +WN +I G +
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G E L +F +ML+ G D T V C S GRAVH++ +K F +
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
NT+++ Y KCG+ +D A+ VF EM ++VV
Sbjct: 335 NTLLDMYSKCGD-------------------------------LDSAKAVFREMSDRSVV 363
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
S+T+MI GY + EA LFE M+ E + P+ +T+ ++++ C L GK +H++
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEAL 340
+N + F+ AL+DMY+KCGS+ +A +VF M +++ +WNT+I + + EAL
Sbjct: 424 KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEAL 483
Query: 341 DLFK-EMEKANVVPDAVTFVGVLSACVHMHDVEEGE 375
LF +E+ PD T VL AC + ++G
Sbjct: 484 SLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 519
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 168/365 (46%), Gaps = 34/365 (9%)
Query: 23 DSQQALVTLENCCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVF 79
D + L+ C + K LK +V I +G D L KL G + AS VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 80 DQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFD 139
D++ + WN+++ SG ++ LFK+M+ G D +T+ V K+ + +
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 140 FGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLI 199
G +H +K F V N+++ FY K + KVFD+M V+SW ++I G +
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 200 ACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVS 259
+ G ++ VF +M L G++I+ T+VS
Sbjct: 273 SNGLAEKGLSVFVQM--------------------------LVSGIEIDLA-----TIVS 301
Query: 260 LVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERN 319
+ + C + + LG+ +H +K L+DMYSKCG LD A VF M++R+
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 320 LATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFS 379
+ ++ +MI GL+ EA+ LF+EME+ + PD T VL+ C ++EG+R
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421
Query: 380 LMTEH 384
+ E+
Sbjct: 422 WIKEN 426
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 162/389 (41%), Gaps = 83/389 (21%)
Query: 33 NCCNFKQL----KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSF 88
NCC +L K+VH I + L D + L+ G M A LVF ++ D
Sbjct: 405 NCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDII 464
Query: 89 TWNVMIRGCTLSGSPEHALVLFKEMLL-KGFAPDKFTYPFVIKACIASNAFDFGRAVHAL 147
+WN +I G + + AL LF +L K F+PD+ T V+ AC + +AFD GR +H
Sbjct: 465 SWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGY 524
Query: 148 AIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRA 207
++ ++ D +V N++++ Y KCG +FD + +VSWT +IAG
Sbjct: 525 IMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGY--------- 575
Query: 208 REVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEM 267
+ G+ K EA LF M+ + +E + VSL+ AC+
Sbjct: 576 -----------------GMHGFGK-----EAIALFNQMRQAGIEADEISFVSLLYACSHS 613
Query: 268 GSLKLGKWIHDYAIKNGIELGPFLG--TALIDMYSKCGSLDDAWIVFGIMTERNLATWNT 325
G + G W +++ ++ P + ++DM ++ G L A
Sbjct: 614 GLVDEG-WRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKA----------------- 655
Query: 326 MITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDV----EEGERYFSLM 381
++ +E + PDA + +L C HDV + E+ F L
Sbjct: 656 -----------------YRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELE 698
Query: 382 TEHYGISPILEHYVCMVELYTGDSELDEV 410
E+ G +YV M +Y + ++V
Sbjct: 699 PENTG------YYVLMANIYAEAEKWEQV 721
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 190/387 (49%), Gaps = 38/387 (9%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
KQ H + G D + L+ GK+ A VFD+I + +W MIRG L+
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 101 GSPEHALVLFKEMLLK------GFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFW 154
G+ A+ LFK++L+ D VI AC A ++H+ IK F
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 155 GDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEM 214
V NT+++ Y K G G V AR++FD++
Sbjct: 216 RGVSVGNTLLDAYAKGGE-----------------------------GGVAVARKIFDQI 246
Query: 215 PSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN--VRPNEFTLVSLVSACTEMGSLKL 272
K+ VS+ +++ Y + EAF++F + ++N V N TL +++ A + G+L++
Sbjct: 247 VDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL-VKNKVVTFNAITLSTVLLAVSHSGALRI 305
Query: 273 GKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGV 332
GK IHD I+ G+E +GT++IDMY KCG ++ A F M +N+ +W MI G+
Sbjct: 306 GKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGM 365
Query: 333 HGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILE 392
HG + +AL+LF M + V P+ +TFV VL+AC H EG R+F+ M +G+ P LE
Sbjct: 366 HGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLE 425
Query: 393 HYVCMVELYTGDSELDEVYTSEEAMSL 419
HY CMV+L L + Y + M +
Sbjct: 426 HYGCMVDLLGRAGFLQKAYDLIQRMKM 452
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 71 KMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIK 130
+ N +L ++ D F+WN +I SG AL+ F M P + ++P IK
Sbjct: 25 RQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIK 84
Query: 131 ACIASNAFDF--GRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSV 188
AC S+ FD G+ H A + D +V + ++ Y CG ED KVFD++ ++
Sbjct: 85 AC--SSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142
Query: 189 VSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE 248
VSWT++I G G A +F ++ V+ D + M ++
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDL--------------------LVDENDDDDAMFLD 182
Query: 249 NVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKC--GSLD 306
++ LVS++SAC+ + + L + IH + IK G + G +G L+D Y+K G +
Sbjct: 183 SM-----GLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVA 237
Query: 307 DAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVP-DAVTFVGVLSAC 365
A +F + +++ ++N++++ G+S EA ++F+ + K VV +A+T VL A
Sbjct: 238 VARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAV 297
Query: 366 VH 367
H
Sbjct: 298 SH 299
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 173/352 (49%), Gaps = 36/352 (10%)
Query: 58 LLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKG 117
L+ L+ + +N A +FDQ+ + +W MI + + AL L ML
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 118 FAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGC 177
P+ +TY V+++C N R +H IK D +V++ +++ + K G ED
Sbjct: 158 VRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDAL 214
Query: 178 KVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVE 237
VFD+M + W ++I G + D A E+F M ++ A
Sbjct: 215 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQA------------- 261
Query: 238 AFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALID 297
TL S++ ACT + L+LG H + +K +L L AL+D
Sbjct: 262 ------------------TLTSVLRACTGLALLELGMQAHVHIVKYDQDL--ILNNALVD 301
Query: 298 MYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVT 357
MY KCGSL+DA VF M ER++ TW+TMI+ L +G S+EAL LF+ M+ + P+ +T
Sbjct: 302 MYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYIT 361
Query: 358 FVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDE 409
VGVL AC H +E+G YF M + YGI P+ EHY CM++L +LD+
Sbjct: 362 IVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDD 413
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 135/307 (43%), Gaps = 37/307 (12%)
Query: 30 TLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFT 89
L +C ++ +H II+ GL D + L+ G+ A VFD++ D+
Sbjct: 168 VLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 227
Query: 90 WNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAI 149
WN +I G + + AL LFK M GF ++ T V++AC + G H +
Sbjct: 228 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV 287
Query: 150 KMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRARE 209
K + D + N +++ Y KCG+ ED A
Sbjct: 288 K--YDQDLILNNALVDMYCKCGSLED-------------------------------ALR 314
Query: 210 VFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGS 269
VF++M ++V++W+ MI G + EA LFE M+ +PN T+V ++ AC+ G
Sbjct: 315 VFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGL 374
Query: 270 LKLGKWIHDYAIKNGIELGPFLG--TALIDMYSKCGSLDDAWIVFGIMT-ERNLATWNTM 326
L+ G W + ++K + P +ID+ K G LDDA + M E + TW T+
Sbjct: 375 LEDG-WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTL 433
Query: 327 ITSLGVH 333
+ + V
Sbjct: 434 LGACRVQ 440
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 65/136 (47%)
Query: 237 EAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALI 296
A + +Q + + T L+ C ++ G I + NG FL LI
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 297 DMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAV 356
+MY K L+DA +F M +RN+ +W TMI++ + ++AL+L M + NV P+
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 357 TFVGVLSACVHMHDVE 372
T+ VL +C M DV
Sbjct: 164 TYSSVLRSCNGMSDVR 179
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 20/210 (9%)
Query: 22 FDSQQALVT--LENCCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYAS 76
F ++QA +T L C L+ Q H I++ D +L L+ C G + A
Sbjct: 256 FIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDAL 313
Query: 77 LVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASN 136
VF+Q+ D TW+ MI G +G + AL LF+ M G P+ T V+ AC +
Sbjct: 314 RVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAG 373
Query: 137 AFDFGRAVHALAIKMRFWGDTYVQ---NTMMNFYFKCGNEEDGCKVFDKMRGCS--VVSW 191
+ G + + +G V+ M++ K G +D K+ ++M C V+W
Sbjct: 374 LLEDG--WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEME-CEPDAVTW 430
Query: 192 TTLIAGLIACGKVDRAREVFDEMPSKNVVS 221
TL+ AC +V R V E +K V++
Sbjct: 431 RTLLG---AC-RVQR-NMVLAEYAAKKVIA 455
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 206/439 (46%), Gaps = 45/439 (10%)
Query: 18 PTTRFDSQQALVTLENCCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGK--- 71
P F AL L C + + L+ +VH +I++ L +LL YGK
Sbjct: 48 PEMGFHGYDAL--LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLL---IFYGKCDC 102
Query: 72 MNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKA 131
+ A V D++ + +W MI + +G AL +F EM+ P++FT+ V+ +
Sbjct: 103 LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTS 162
Query: 132 CIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSW 191
CI ++ G+ +H L +K + +V +++++ Y K G
Sbjct: 163 CIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAG-------------------- 202
Query: 192 TTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVR 251
++ ARE+F+ +P ++VVS TA+I GY + EA ++F + E +
Sbjct: 203 -----------QIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMS 251
Query: 252 PNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIV 311
PN T SL++A + + L GK H + ++ + L +LIDMYSKCG+L A +
Sbjct: 252 PNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRL 311
Query: 312 FGIMTERNLATWNTMITSLGVHGLSEEALDLFKEM-EKANVVPDAVTFVGVLSACVHMHD 370
F M ER +WN M+ HGL E L+LF+ M ++ V PDAVT + VLS C H
Sbjct: 312 FDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRM 371
Query: 371 VEEGERYF-SLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNVVE 429
+ G F ++ YG P EHY C+V++ +DE + + M S T +
Sbjct: 372 EDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMP-SKPTAGVLGS 430
Query: 430 LLQESKLTSVDDIKEVINK 448
LL ++ DI E + +
Sbjct: 431 LLGACRVHLSVDIGESVGR 449
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 198/455 (43%), Gaps = 76/455 (16%)
Query: 18 PTTRFDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGK-MNYAS 76
P T L T +F Q H +++SGL D+ + LL G M
Sbjct: 58 PATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETR 117
Query: 77 LVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASN 136
VFD D+ +W M+ G AL +F EM+ G ++FT +KAC
Sbjct: 118 RVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELG 177
Query: 137 AFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIA 196
GR H + I F + ++ +T+ Y D +VFD+M V+ WT +++
Sbjct: 178 EVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLS 237
Query: 197 G---------------------------------LIACGKVDRARE-------------- 209
L ACG + R ++
Sbjct: 238 AFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIG 297
Query: 210 ------------------------VFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGM 245
VF+ M KN VSW+A++ GY + +A ++F M
Sbjct: 298 SNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM 357
Query: 246 QIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSL 305
+ +++ + +++ AC + +++LGK IH ++ G + +ALID+Y K G +
Sbjct: 358 EEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCI 413
Query: 306 DDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSAC 365
D A V+ M+ RN+ TWN M+++L +G EEA+ F +M K + PD ++F+ +L+AC
Sbjct: 414 DSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTAC 473
Query: 366 VHMHDVEEGERYFSLMTEHYGISPILEHYVCMVEL 400
H V+EG YF LM + YGI P EHY CM++L
Sbjct: 474 GHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDL 508
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 140/302 (46%), Gaps = 40/302 (13%)
Query: 31 LENCCNFKQLKQ---VHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS 87
L C N ++LKQ +HG++I +G+ + V+ LL G + A VF+ ++ +S
Sbjct: 272 LTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNS 331
Query: 88 FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHAL 147
+W+ ++ G +G E A+ +F+EM K D + + V+KAC A G+ +H
Sbjct: 332 VSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQ 387
Query: 148 AIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRA 207
++ +G+ V++ +++ Y K G + +V+ KM ++++W +++ L G+ + A
Sbjct: 388 YVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEA 447
Query: 208 REVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEM 267
F++M K ++P+ + +++++AC
Sbjct: 448 VSFFNDMVKK-------------------------------GIKPDYISFIAILTACGHT 476
Query: 268 GSLKLGK-WIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLAT-WNT 325
G + G+ + A GI+ G + +ID+ + G ++A + RN A+ W
Sbjct: 477 GMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGV 536
Query: 326 MI 327
++
Sbjct: 537 LL 538
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 190/383 (49%), Gaps = 34/383 (8%)
Query: 39 QLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAP-DSFTWNVMIRGC 97
Q K HG +IR + D + LL C + ++ A +F +I+ + WN M++G
Sbjct: 349 QGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGY 408
Query: 98 TLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDT 157
+ LF+++ G D + VI +C A G+++H +K
Sbjct: 409 GKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTI 468
Query: 158 YVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK 217
V N++++ Y K G+ V+W +F E +
Sbjct: 469 SVVNSLIDLYGKMGDL--------------TVAW-----------------RMFCEADT- 496
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
NV++W AMI YV C++ +A LF+ M EN +P+ TLV+L+ AC GSL+ G+ IH
Sbjct: 497 NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIH 556
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSE 337
Y + E+ L ALIDMY+KCG L+ + +F +++ WN MI+ G+HG E
Sbjct: 557 RYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVE 616
Query: 338 EALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCM 397
A+ LF +ME+++V P TF+ +LSAC H VE+G++ F L Y + P L+HY C+
Sbjct: 617 SAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLF-LKMHQYDVKPNLKHYSCL 675
Query: 398 VELYTGDSELDEVYTSEEAMSLS 420
V+L + L+E ++ +M S
Sbjct: 676 VDLLSRSGNLEEAESTVMSMPFS 698
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 180/370 (48%), Gaps = 29/370 (7%)
Query: 16 NTPTTRFDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYA 75
++ + D +++ + + + L++ + II GL+ + + KL+ +YGK N +
Sbjct: 19 SSSASYVDRHISVILCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLS 78
Query: 76 SLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIAS 135
S VF + D F WN +I+ +G +L F MLL G +PD FT P V+ AC
Sbjct: 79 SRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAEL 138
Query: 136 NAFDFGRAVHALAIKM-RFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTL 194
F G VH L +K F +T V + + FY KCG +D C VFD+M VV+WT +
Sbjct: 139 LWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAI 198
Query: 195 IAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNE 254
I+G + G+ + +M S G ++ +PN
Sbjct: 199 ISGHVQNGESEGGLGYLCKMHSA--------------------------GSDVD--KPNP 230
Query: 255 FTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGI 314
TL AC+ +G+LK G+ +H +A+KNG+ F+ +++ YSK G+ +A++ F
Sbjct: 231 RTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRE 290
Query: 315 MTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEG 374
+ + ++ +W ++I SL G EE+ D+F EM+ + PD V +++ M V +G
Sbjct: 291 LGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQG 350
Query: 375 ERYFSLMTEH 384
+ + + H
Sbjct: 351 KAFHGFVIRH 360
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 143/338 (42%), Gaps = 36/338 (10%)
Query: 43 VHGRIIR-SGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSG 101
VHG +++ G + + + G + A LVFD++ D W +I G +G
Sbjct: 147 VHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNG 206
Query: 102 SPEHALVLFKEMLLKGF---APDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTY 158
E L +M G P+ T +AC A GR +H A+K +
Sbjct: 207 ESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKF 266
Query: 159 VQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKN 218
VQ++M +FY K GN + F RE+ DE +
Sbjct: 267 VQSSMFSFYSKSGNPSEAYLSF---------------------------RELGDE----D 295
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
+ SWT++I + E+FD+F MQ + + P+ + L++ +M + GK H
Sbjct: 296 MFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHG 355
Query: 279 YAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVF-GIMTERNLATWNTMITSLGVHGLSE 337
+ I++ L + +L+ MY K L A +F I E N WNTM+ G
Sbjct: 356 FVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHV 415
Query: 338 EALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGE 375
+ ++LF++++ + D+ + V+S+C H+ V G+
Sbjct: 416 KCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGK 453
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 185/370 (50%), Gaps = 33/370 (8%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
K +H RII S D L LL C+ G M A VF +I+ P+ +WN +I GC+ +
Sbjct: 320 KLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSEN 379
Query: 101 GSPEHALVLFKEML-LKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYV 159
G E A+++++ +L + PD++T+ I A F G+ +H K+ + +V
Sbjct: 380 GFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFV 439
Query: 160 QNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNV 219
T+++ YFK N E + A++VFD M ++V
Sbjct: 440 GTTLLSMYFK--NRE-----------------------------AESAQKVFDVMKERDV 468
Query: 220 VSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDY 279
V WT MI G+ + A F M E R + F+L S++ AC++M L+ G+ H
Sbjct: 469 VLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCL 528
Query: 280 AIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEA 339
AI+ G + + AL+DMY K G + A +F + + +L WN+M+ + HG+ E+A
Sbjct: 529 AIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKA 588
Query: 340 LDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVE 399
L F+++ + +PDAVT++ +L+AC H +G+ ++ M E GI +HY CMV
Sbjct: 589 LSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQ-GIKAGFKHYSCMVN 647
Query: 400 LYTGDSELDE 409
L + +DE
Sbjct: 648 LVSKAGLVDE 657
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 152/335 (45%), Gaps = 40/335 (11%)
Query: 37 FKQLKQVHGRIIRSGL---THDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVM 93
K+ +Q+H ++ +G T L+ G + A VFD++ + ++N +
Sbjct: 110 LKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNAL 169
Query: 94 IRGCTLSGSPE---HALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIK 150
S +P+ +A L M + P+ T+ +++ C G ++++ IK
Sbjct: 170 YSA--YSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIK 227
Query: 151 MRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREV 210
+ + + VQ +++ Y CG+ ++ AR +
Sbjct: 228 LGYSDNVVVQTSVLGMYSSCGD-------------------------------LESARRI 256
Query: 211 FDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSL 270
FD + +++ V+W MI G +K + + F M + V P +FT +++ C+++GS
Sbjct: 257 FDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSY 316
Query: 271 KLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSL 330
LGK IH I + L AL+DMY CG + +A+ VFG + NL +WN++I+
Sbjct: 317 SLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGC 376
Query: 331 GVHGLSEEALDLFKEMEKANV-VPDAVTFVGVLSA 364
+G E+A+ +++ + + + PD TF +SA
Sbjct: 377 SENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISA 411
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 1/183 (0%)
Query: 194 LIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVE-AFDLFEGMQIENVRP 252
LI+ + CG +++AR+VFD+MP +NVVS+ A+ Y + AF L M E V+P
Sbjct: 138 LISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKP 197
Query: 253 NEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVF 312
N T SLV C + + +G ++ IK G + T+++ MYS CG L+ A +F
Sbjct: 198 NSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIF 257
Query: 313 GIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVE 372
+ R+ WNTMI + E+ L F+ M + V P T+ VL+ C +
Sbjct: 258 DCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYS 317
Query: 373 EGE 375
G+
Sbjct: 318 LGK 320
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 16/194 (8%)
Query: 194 LIAGLIACGKVDRAREVFDEMPSKNVVSWTAM--IDGYVKCQRPVEA-------FDLFEG 244
LI+ + C +++AR+VFD+MP +N+V+ + + YV + + F +
Sbjct: 28 LISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFF 87
Query: 245 MQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELG---PFLGTALIDMYSK 301
M + + ++V L C + LK + IH + G P+ LI MY +
Sbjct: 88 MPLNEIAS---SVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVR 144
Query: 302 CGSLDDAWIVFGIMTERNLATWNTMITSLGVH-GLSEEALDLFKEMEKANVVPDAVTFVG 360
CGSL+ A VF M RN+ ++N + ++ + + A L M V P++ TF
Sbjct: 145 CGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTS 204
Query: 361 VLSACVHMHDVEEG 374
++ C + DV G
Sbjct: 205 LVQVCAVLEDVLMG 218
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 108/272 (39%), Gaps = 31/272 (11%)
Query: 37 FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRG 96
F K +HG++ + G + LL + A VFD + D W MI G
Sbjct: 418 FVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVG 477
Query: 97 CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGD 156
+ G+ E A+ F EM + D F+ VI AC G H LAI+ F
Sbjct: 478 HSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCV 537
Query: 157 TYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPS 216
V +++ Y K G K + A +F +
Sbjct: 538 MSVCGALVDMYGKNG-------------------------------KYETAETIFSLASN 566
Query: 217 KNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWI 276
++ W +M+ Y + +A FE + P+ T +SL++AC+ GS GK++
Sbjct: 567 PDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFL 626
Query: 277 HDYAIKNGIELGPFLGTALIDMYSKCGSLDDA 308
+ + GI+ G + ++++ SK G +D+A
Sbjct: 627 WNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEA 658
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 182/375 (48%), Gaps = 36/375 (9%)
Query: 21 RFDSQQALVTLENCCN----FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYAS 76
RF +++ V L N C+ F+ +QVHG +++ G+ + ++ L+ G++ A
Sbjct: 180 RFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSAL 238
Query: 77 LVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASN 136
FD + D +W +I C+ G A+ +F ML F P++FT ++KAC
Sbjct: 239 RAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEK 298
Query: 137 AFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIA 196
A FGR VH+L +K D +V ++M+ Y KCG D
Sbjct: 299 ALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISD--------------------- 337
Query: 197 GLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFT 256
R+VFD M ++N V+WT++I + + EA LF M+ ++ N T
Sbjct: 338 ----------CRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLT 387
Query: 257 LVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT 316
+VS++ AC +G+L LGK +H IKN IE ++G+ L+ +Y KCG DA+ V +
Sbjct: 388 VVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP 447
Query: 317 ERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
R++ +W MI+ G EALD KEM + V P+ T+ L AC + + G
Sbjct: 448 SRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRS 507
Query: 377 YFSLMTEHYGISPIL 391
S+ +++ +S +
Sbjct: 508 IHSIAKKNHALSNVF 522
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 34/338 (10%)
Query: 31 LENCCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS 87
L+ C K L+ QVH +++ + D + L+ G+++ VFD ++ ++
Sbjct: 291 LKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNT 350
Query: 88 FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHAL 147
TW +I G E A+ LF+ M + + T +++AC + A G+ +HA
Sbjct: 351 VTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQ 410
Query: 148 AIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRA 207
IK + Y+ +T++ Y KCG D A
Sbjct: 411 IIKNSIEKNVYIGSTLVWLYCKCGESRD-------------------------------A 439
Query: 208 REVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEM 267
V ++PS++VVSWTAMI G EA D + M E V PN FT S + AC
Sbjct: 440 FNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANS 499
Query: 268 GSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMI 327
SL +G+ IH A KN F+G+ALI MY+KCG + +A+ VF M E+NL +W MI
Sbjct: 500 ESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMI 559
Query: 328 TSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSAC 365
+G EAL L ME D F +LS C
Sbjct: 560 MGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 177/355 (49%), Gaps = 42/355 (11%)
Query: 19 TTRFDSQQ---ALVT--LENCCNFKQLKQVHGRIIRSGLTHDQVLL--RKLLQHSCAYGK 71
++ FDS++ AL+ L++ + +K++H ++ DQV+ L+ G
Sbjct: 75 SSSFDSERVDYALLAEWLQSSNGMRLIKRIHAMALKC--FDDQVIYFGNNLISSCVRLGD 132
Query: 72 MNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFA-PDKFTYPFVIK 130
+ YA VFD + ++ TW MI G G + A LF++ + G ++ + ++
Sbjct: 133 LVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLN 192
Query: 131 ACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVS 190
C F+ GR VH +K+ G+ V+++++ FY +CG
Sbjct: 193 LCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCG------------------- 232
Query: 191 WTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENV 250
++ A FD M K+V+SWTA+I + ++A +F GM
Sbjct: 233 ------------ELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWF 280
Query: 251 RPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWI 310
PNEFT+ S++ AC+E +L+ G+ +H +K I+ F+GT+L+DMY+KCG + D
Sbjct: 281 LPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRK 340
Query: 311 VFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSAC 365
VF M+ RN TW ++I + G EEA+ LF+ M++ +++ + +T V +L AC
Sbjct: 341 VFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRAC 395
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
K++H +II++ + + + L+ C G+ A V Q+ + D +W MI GC+
Sbjct: 405 KELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSL 464
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G AL KEM+ +G P+ FTY +KAC S + GR++H++A K + +V
Sbjct: 465 GHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVG 524
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
+ +++ Y KCG V A VFD MP KN+V
Sbjct: 525 SALIHMYAKCGF-------------------------------VSEAFRVFDSMPEKNLV 553
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEM 267
SW AMI GY + EA L M+ E +++ +++S C ++
Sbjct: 554 SWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 600
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 2/192 (1%)
Query: 194 LIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVR-P 252
LI+ + G + AR+VFD MP KN V+WTAMIDGY+K EAF LFE +R
Sbjct: 123 LISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFT 182
Query: 253 NEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVF 312
NE V L++ C+ +LG+ +H +K G+ + ++L+ Y++CG L A F
Sbjct: 183 NERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAF 241
Query: 313 GIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVE 372
+M E+++ +W +I++ G +A+ +F M +P+ T +L AC +
Sbjct: 242 DMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALR 301
Query: 373 EGERYFSLMTEH 384
G + SL+ +
Sbjct: 302 FGRQVHSLVVKR 313
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 184/378 (48%), Gaps = 32/378 (8%)
Query: 35 CNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMI 94
C+ + + +H +I+++G D L L+ GK + V + I D W VMI
Sbjct: 259 CDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMI 318
Query: 95 RGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFW 154
G G E AL++F EML G V+ +C +FD G +VH ++ +
Sbjct: 319 SGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYT 378
Query: 155 GDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEM 214
DT N+++ Y KCG+ + +F++M +VSW +I+
Sbjct: 379 LDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIIS------------------ 420
Query: 215 PSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRP-NEFTLVSLVSACTEMGSLKLG 273
GY + +A LFE M+ + V+ + FT+VSL+ AC+ G+L +G
Sbjct: 421 -------------GYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVG 467
Query: 274 KWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVH 333
K IH I++ I + TAL+DMYSKCG L+ A F ++ +++ +W +I G H
Sbjct: 468 KLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFH 527
Query: 334 GLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEH 393
G + AL+++ E + + P+ V F+ VLS+C H V++G + FS M +G+ P EH
Sbjct: 528 GKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEH 587
Query: 394 YVCMVELYTGDSELDEVY 411
C+V+L +++ +
Sbjct: 588 LACVVDLLCRAKRIEDAF 605
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 163/372 (43%), Gaps = 39/372 (10%)
Query: 31 LENCCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS 87
L+ C + ++L +H +++ +G + D + L+ +G + +A VF+++ D
Sbjct: 53 LKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDV 112
Query: 88 FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHAL 147
W MI + +G A L EM +G P T ++ + + +H
Sbjct: 113 VHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDF 169
Query: 148 AIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRA 207
A+ F D V N+M+N Y KC + D A
Sbjct: 170 AVIYGFDCDIAVMNSMLNLYCKCDHVGD-------------------------------A 198
Query: 208 REVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEM 267
+++FD+M +++VSW MI GY E L M+ + +RP++ T + +S M
Sbjct: 199 KDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTM 258
Query: 268 GSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMI 327
L++G+ +H +K G ++ L TALI MY KCG + ++ V + +++ W MI
Sbjct: 259 CDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMI 318
Query: 328 TSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEH-YG 386
+ L G +E+AL +F EM ++ + V+++C + + G + H Y
Sbjct: 319 SGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYT 378
Query: 387 I-SPILEHYVCM 397
+ +P L + M
Sbjct: 379 LDTPALNSLITM 390
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 126/286 (44%), Gaps = 34/286 (11%)
Query: 90 WNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAI 149
+N I + G + L F ML PD FT+P ++KAC + FG ++H +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 150 KMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRARE 209
F D Y+ ++++N Y K G KVF++MR VV W
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHW------------------ 115
Query: 210 VFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGS 269
TAMI Y + EA L M+ + ++P TL+ ++S E+
Sbjct: 116 -------------TAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQ 162
Query: 270 LKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITS 329
L+ +HD+A+ G + + +++++Y KC + DA +F M +R++ +WNTMI+
Sbjct: 163 LQC---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISG 219
Query: 330 LGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGE 375
G E L L M + PD TF LS M D+E G
Sbjct: 220 YASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGR 265
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 129/399 (32%), Positives = 181/399 (45%), Gaps = 40/399 (10%)
Query: 30 TLEN---CCNFKQL----KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQI 82
TL N CC+ L K VH + + + + LL G A LVF +
Sbjct: 375 TLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSM 434
Query: 83 NAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLK--GFAPDKFTYPFVIKACIASNAFDF 140
D W +I G +G + AL +F +M PD V AC A F
Sbjct: 435 EEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRF 494
Query: 141 GRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIA 200
G VH IK + +V +++++ Y KCG E
Sbjct: 495 GLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPE-------------------------- 528
Query: 201 CGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSL 260
A +VF M ++N+V+W +MI Y + P + DLF M + + P+ ++ S+
Sbjct: 529 -----MALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSV 583
Query: 261 VSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNL 320
+ A + SL GK +H Y ++ GI L ALIDMY KCG A +F M ++L
Sbjct: 584 LVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSL 643
Query: 321 ATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSL 380
TWN MI G HG AL LF EM+KA PD VTF+ ++SAC H VEEG+ F
Sbjct: 644 ITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEF 703
Query: 381 MTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
M + YGI P +EHY MV+L L+E Y+ +AM +
Sbjct: 704 MKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPI 742
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 162/346 (46%), Gaps = 40/346 (11%)
Query: 36 NFK--QLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQI-NAPDSFTWNV 92
NF+ + KQ+HG ++R+ L D L L+ +G A VF +I + + WNV
Sbjct: 183 NFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNV 242
Query: 93 MIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPF--VIKACIASNAFDFGRAVHALAIK 150
MI G SG E +L L+ ML K + + F + AC S FGR +H +K
Sbjct: 243 MIVGFGGSGICESSLDLY--MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 151 MRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREV 210
M D YV ++++ Y KCG V A V
Sbjct: 301 MGLHNDPYVCTSLLSMYSKCG-------------------------------MVGEAETV 329
Query: 211 FDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSL 270
F + K + W AM+ Y + A DLF M+ ++V P+ FTL +++S C+ +G
Sbjct: 330 FSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLY 389
Query: 271 KLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSL 330
GK +H K I+ + +AL+ +YSKCG DA++VF M E+++ W ++I+ L
Sbjct: 390 NYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGL 449
Query: 331 GVHGLSEEALDLFKEMEKAN--VVPDAVTFVGVLSACVHMHDVEEG 374
+G +EAL +F +M+ + + PD+ V +AC + + G
Sbjct: 450 CKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFG 495
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 153/356 (42%), Gaps = 39/356 (10%)
Query: 19 TTRFDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLV 78
T+ F L N K +HG ++ G +D + L+ G ++YA V
Sbjct: 58 TSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQV 117
Query: 79 FDQ-------INAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKA 131
FD ++A D WN MI G + + F+ ML+ G PD F+ V+
Sbjct: 118 FDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSV 177
Query: 132 CIASNAF--DFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV 189
F + G+ +H ++ D++++ +++ YFK G D +VF
Sbjct: 178 MCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVF--------- 228
Query: 190 SWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN 249
E+ D+ NVV W MI G+ + DL+ + +
Sbjct: 229 ------------------VEIEDK---SNVVLWNVMIVGFGGSGICESSLDLYMLAKNNS 267
Query: 250 VRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAW 309
V+ + + AC++ + G+ IH +K G+ P++ T+L+ MYSKCG + +A
Sbjct: 268 VKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAE 327
Query: 310 IVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSAC 365
VF + ++ L WN M+ + + ALDLF M + +V+PD+ T V+S C
Sbjct: 328 TVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCC 383
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 148/344 (43%), Gaps = 67/344 (19%)
Query: 34 CCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTW 90
C + L+ QVHG +I++GL + + L+ G A VF ++ + W
Sbjct: 486 CAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAW 545
Query: 91 NVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIK 150
N MI + + PE ++ LF ML +G PD + V+ A ++ + G+++H ++
Sbjct: 546 NSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLR 605
Query: 151 MRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREV 210
+ DT+++N +++ Y KCG F K A +
Sbjct: 606 LGIPSDTHLKNALIDMYVKCG--------FSKY-----------------------AENI 634
Query: 211 FDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSL 270
F +M K++++W MI GY + A LF+ M+ P++ T +SL+SAC G +
Sbjct: 635 FKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFV 694
Query: 271 KLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSL 330
+ GK I ++ ++ +GI E N+ + M+ L
Sbjct: 695 EEGKNIFEFMKQD----------------------------YGI--EPNMEHYANMVDLL 724
Query: 331 GVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEG 374
G GL EEA K M + D+ ++ +LSA H+VE G
Sbjct: 725 GRAGLLEEAYSFIKAMP---IEADSSIWLCLLSASRTHHNVELG 765
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%)
Query: 28 LVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS 87
LV + + + + K +HG +R G+ D L L+ G YA +F ++
Sbjct: 584 LVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSL 643
Query: 88 FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAV 144
TWN+MI G G AL LF EM G +PD T+ +I AC S + G+ +
Sbjct: 644 ITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNI 700
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 179/369 (48%), Gaps = 34/369 (9%)
Query: 52 LTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFT---WNVMIRGCTLSGSPEHALV 108
L H+ LL KL+ +++ A +FD + T W M G + +GSP AL+
Sbjct: 163 LRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALI 222
Query: 109 LFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYF 168
++ +ML P F+ +KAC+ GR +HA +K + D V N ++ Y
Sbjct: 223 VYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYM 282
Query: 169 KCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDG 228
+ G +FD AR+VFD M +NVV+W ++I
Sbjct: 283 ESG-------LFDD------------------------ARKVFDGMSERNVVTWNSLISV 311
Query: 229 YVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELG 288
K R E F+LF MQ E + + TL +++ AC+ + +L GK IH +K+ +
Sbjct: 312 LSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPD 371
Query: 289 PFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEK 348
L +L+DMY KCG ++ + VF +M ++LA+WN M+ ++G EE ++LF+ M +
Sbjct: 372 VPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIE 431
Query: 349 ANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELD 408
+ V PD +TFV +LS C E G F M + +SP LEHY C+V++ ++
Sbjct: 432 SGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIK 491
Query: 409 EVYTSEEAM 417
E E M
Sbjct: 492 EAVKVIETM 500
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 182/380 (47%), Gaps = 34/380 (8%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+ +H +I +G D + L Q G A +F ++ D +W MI G +
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYN 376
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
P+ A+ ++ M PD+ T V+ AC D G +H LAIK R V
Sbjct: 377 FLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVA 436
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N ++N Y KC C +D+A ++F +P KNV+
Sbjct: 437 NNLINMYSKC-----------------------------KC--IDKALDIFHNIPRKNVI 465
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
SWT++I G R EA M++ ++PN TL + ++AC +G+L GK IH +
Sbjct: 466 SWTSIIAGLRLNNRCFEALIFLRQMKM-TLQPNAITLTAALAACARIGALMCGKEIHAHV 524
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEAL 340
++ G+ L FL AL+DMY +CG ++ AW F ++++ +WN ++T G +
Sbjct: 525 LRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVV 583
Query: 341 DLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVEL 400
+LF M K+ V PD +TF+ +L C V +G YFS M E YG++P L+HY C+V+L
Sbjct: 584 ELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDL 642
Query: 401 YTGDSELDEVYTSEEAMSLS 420
EL E + + M ++
Sbjct: 643 LGRAGELQEAHKFIQKMPVT 662
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 177/372 (47%), Gaps = 36/372 (9%)
Query: 25 QQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKL----LQHSCAYGKMNYASLVFD 80
+ V L C +K+ ++ ++ L+ L +L L +G + A VF
Sbjct: 94 EDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFG 153
Query: 81 QINAPDSFTWNVMIRGCTLSGSPEHALVLFKEML-LKGFAPDKFTYPFVIKACIASNAFD 139
+++ + F+WNV++ G G + A+ L+ ML + G PD +T+P V++ C
Sbjct: 154 KMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLA 213
Query: 140 FGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLI 199
G+ VH ++ + D V N ++ Y KCG+
Sbjct: 214 RGKEVHVHVVRYGYELDIDVVNALITMYVKCGD--------------------------- 246
Query: 200 ACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVS 259
V AR +FD MP ++++SW AMI GY + E +LF M+ +V P+ TL S
Sbjct: 247 ----VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTS 302
Query: 260 LVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERN 319
++SAC +G +LG+ IH Y I G + + +L MY GS +A +F M ++
Sbjct: 303 VISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKD 362
Query: 320 LATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFS 379
+ +W TMI+ + L ++A+D ++ M++ +V PD +T VLSAC + D++ G
Sbjct: 363 IVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK 422
Query: 380 LMTEHYGISPIL 391
L + IS ++
Sbjct: 423 LAIKARLISYVI 434
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
Query: 237 EAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALI 296
EA L MQ V +E V+LV C + + G ++ A+ + LG LG A +
Sbjct: 77 EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFL 136
Query: 297 DMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEM-EKANVVPDA 355
M+ + G+L DAW VFG M+ERNL +WN ++ G +EA+ L+ M V PD
Sbjct: 137 AMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDV 196
Query: 356 VTFVGVLSACVHMHDVEEGE 375
TF VL C + D+ G+
Sbjct: 197 YTFPCVLRTCGGIPDLARGK 216
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 86/420 (20%), Positives = 156/420 (37%), Gaps = 83/420 (19%)
Query: 8 PDANVPHF---NTPTTRFDSQQALVTLENCCNFKQLK---QVHGRIIRSGLTHDQVLLRK 61
PD + + + + + D L C L ++H I++ L ++
Sbjct: 379 PDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN 438
Query: 62 LLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPD 121
L+ ++ A +F I + +W +I G L+ AL+ ++M + P+
Sbjct: 439 LINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPN 497
Query: 122 KFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFD 181
T + AC A G+ +HA ++ D ++ N +++ Y +CG F+
Sbjct: 498 AITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN 557
Query: 182 KMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDL 241
+ V SW L+ G G+ E+FD M VK +
Sbjct: 558 SQKK-DVTSWNILLTGYSERGQGSMVVELFDRM---------------VKSR-------- 593
Query: 242 FEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSK 301
VRP+E T +SL+ C++ ++ G + +SK
Sbjct: 594 --------VRPDEITFISLLCGCSKSQMVRQG----------------------LMYFSK 623
Query: 302 CGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGV 361
++D +G+ NL + ++ LG G +EA K ++K V PD + +
Sbjct: 624 ---MED----YGVTP--NLKHYACVVDLLGRAGELQEA---HKFIQKMPVTPDPAVWGAL 671
Query: 362 LSACVHMHDVEEGE----RYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAM 417
L+AC H ++ GE F L + G +Y+ + LY + EV M
Sbjct: 672 LNACRIHHKIDLGELSAQHIFELDKKSVG------YYILLCNLYADCGKWREVAKVRRMM 725
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 185/393 (47%), Gaps = 34/393 (8%)
Query: 30 TLENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPD 86
L C + + L K ++ ++++G + + L+ G M A VF+ + D
Sbjct: 313 VLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKD 372
Query: 87 SFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHA 146
+ +WN +I G SG A+ LFK M++ D TY +I FG+ +H+
Sbjct: 373 TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS 432
Query: 147 LAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDR 206
IK D V N +++ Y KCG D K+
Sbjct: 433 NGIKSGICIDLSVSNALIDMYAKCGEVGDSLKI--------------------------- 465
Query: 207 AREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTE 266
F M + + V+W +I V+ + M+ V P+ T + + C
Sbjct: 466 ----FSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCAS 521
Query: 267 MGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTM 326
+ + +LGK IH ++ G E +G ALI+MYSKCG L+++ VF M+ R++ TW M
Sbjct: 522 LAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGM 581
Query: 327 ITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYG 386
I + G++G E+AL+ F +MEK+ +VPD+V F+ ++ AC H V+EG F M HY
Sbjct: 582 IYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYK 641
Query: 387 ISPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
I P++EHY C+V+L + ++ + +AM +
Sbjct: 642 IDPMIEHYACVVDLLSRSQKISKAEEFIQAMPI 674
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 169/363 (46%), Gaps = 33/363 (9%)
Query: 20 TRFDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVF 79
TR S L + N +L+++H +I GL KL+ + + + VF
Sbjct: 3 TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVF 62
Query: 80 DQIN-APDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAF 138
+++ A + + WN +IR + +G AL + ++ +PDK+T+P VIKAC
Sbjct: 63 RRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDA 122
Query: 139 DFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGL 198
+ G V+ + M F D +V N +++ Y + G
Sbjct: 123 EMGDLVYEQILDMGFESDLFVGNALVDMYSRMG--------------------------- 155
Query: 199 IACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLV 258
+ RAR+VFDEMP +++VSW ++I GY EA +++ ++ + P+ FT+
Sbjct: 156 ----LLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVS 211
Query: 259 SLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER 318
S++ A + +K G+ +H +A+K+G+ + L+ MY K DA VF M R
Sbjct: 212 SVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVR 271
Query: 319 NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYF 378
+ ++NTMI + EE++ +F E PD +T VL AC H+ D+ + +
Sbjct: 272 DSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIY 330
Query: 379 SLM 381
+ M
Sbjct: 331 NYM 333
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 23 DSQQALVTLENCCNF--KQL-KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVF 79
D LVTL C + K+L K++H ++R G + + L++ G + +S VF
Sbjct: 508 DMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVF 567
Query: 80 DQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFD 139
++++ D TW MI + G E AL F +M G PD + +I AC S D
Sbjct: 568 ERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVD 627
Query: 140 FGRA 143
G A
Sbjct: 628 EGLA 631
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/352 (33%), Positives = 180/352 (51%), Gaps = 7/352 (1%)
Query: 75 ASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIA 134
A VFD+I D + +I A FK +L G P++FT+ VI +
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTT 105
Query: 135 SNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTL 194
S G+ +H A+KM + +V + ++N Y K D + FD R +VVS T L
Sbjct: 106 SRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNL 165
Query: 195 IAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVR-PN 253
I+G + + + A +F MP ++VV+W A+I G+ + R EA + F M E V PN
Sbjct: 166 ISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPN 225
Query: 254 EFTLVSLVSACTEMGSLKLGKWIHDYAIKN-GIELGPFLGTALIDMYSKCGSLDDAWIVF 312
E T ++A + + S GK IH AIK G F+ +LI YSKCG+++D+ + F
Sbjct: 226 ESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAF 285
Query: 313 GIMTE--RNLATWNTMITSLGVHGLSEEALDLFKEMEK-ANVVPDAVTFVGVLSACVHMH 369
+ E RN+ +WN+MI +G EEA+ +F++M K N+ P+ VT +GVL AC H
Sbjct: 286 NKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAG 345
Query: 370 DVEEGERYFSLMTEHYGISPI--LEHYVCMVELYTGDSELDEVYTSEEAMSL 419
++EG YF+ Y + LEHY CMV++ + E ++M L
Sbjct: 346 LIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPL 397
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 98/193 (50%), Gaps = 32/193 (16%)
Query: 204 VDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSA 263
+ A +VFDE+P +V+S TA+I +VK R VEA F+ + +RPNEFT +++ +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 264 CTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDD---------------- 307
T +KLGK +H YA+K G+ F+G+A+++ Y K +L D
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 308 ---------------AWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVV 352
A +F M ER++ TWN +I G +EEA++ F +M + VV
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 353 -PDAVTFVGVLSA 364
P+ TF ++A
Sbjct: 223 IPNESTFPCAITA 235
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 198/392 (50%), Gaps = 10/392 (2%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
K +H I+ G+ D ++ L+ G + A VFD++ + TWN MI G +
Sbjct: 66 KLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSN 125
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRF-WGDTYV 159
G A LF+E+ + T+ +IK + R + +M F +
Sbjct: 126 GDAVLASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFE---RMPFELKNVKA 179
Query: 160 QNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNV 219
+ M+ Y ED K F+ + + W+ +++G G V AR +F + ++++
Sbjct: 180 WSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDL 239
Query: 220 VSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDY 279
V W +I GY + +A D F MQ E P+ T+ S++SAC + G L +G+ +H
Sbjct: 240 VIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSL 299
Query: 280 AIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEA 339
GIEL F+ ALIDMY+KCG L++A VF ++ R++A N+MI+ L +HG +EA
Sbjct: 300 INHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEA 359
Query: 340 LDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVE 399
L++F ME ++ PD +TF+ VL+ACVH + EG + FS M + P ++H+ C++
Sbjct: 360 LEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIH 418
Query: 400 LYTGDSELDEVYTSEEAMSLSMKTNQNVVELL 431
L +L E Y + M + K N V+ L
Sbjct: 419 LLGRSGKLKEAYRLVKEMHV--KPNDTVLGAL 448
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 165/333 (49%), Gaps = 18/333 (5%)
Query: 93 MIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACI-ASNAFDFGRAVHALAIKM 151
+I+ GSP ALVL+ + +G + P +++AC G+ +H+ +IK
Sbjct: 17 LIKNHISRGSPIQALVLYGGIRRRGVYFPGWV-PLILRACACVVPRVVLGKLLHSESIKF 75
Query: 152 RFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVF 211
D V +++++ Y KCG KVFD+M +V +W +I G ++ G A +F
Sbjct: 76 GVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLF 135
Query: 212 DEMP-SKNVVSWTAMIDGYVKCQRPVEAFDLFEGM--QIENVRPNEFTLVSLVSACTEMG 268
+E+ +N V+W MI GY K +A +LFE M +++NV+ L V+ +M
Sbjct: 136 EEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNN-RKME 194
Query: 269 SLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMIT 328
+ K+ D KN F+ + ++ Y + G + +A +F + R+L WNT+I
Sbjct: 195 DAR--KFFEDIPEKNA-----FVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIA 247
Query: 329 SLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGIS 388
+G S++A+D F M+ PDAVT +LSAC ++ G SL+ H GI
Sbjct: 248 GYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLIN-HRGIE 306
Query: 389 PILEHYV--CMVELYTGDSELDEVYTSEEAMSL 419
L +V ++++Y +L+ + E++S+
Sbjct: 307 --LNQFVSNALIDMYAKCGDLENATSVFESISV 337
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 111/235 (47%), Gaps = 6/235 (2%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVI 129
G ++ A +F ++ A D WN +I G +G + A+ F M +G+ PD T ++
Sbjct: 222 GDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSIL 281
Query: 130 KACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV 189
AC S D GR VH+L + +V N +++ Y KCG+ E+ VF+ + SV
Sbjct: 282 SACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVA 341
Query: 190 SWTTLIAGLIACGKVDRAREVFDEMPSKNV----VSWTAMIDGYVKCQRPVEAFDLFEGM 245
++I+ L GK A E+F M S ++ +++ A++ V +E +F M
Sbjct: 342 CCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM 401
Query: 246 QIENVRPNEFTLVSLVSACTEMGSLKLG-KWIHDYAIK-NGIELGPFLGTALIDM 298
+ ++V+PN L+ G LK + + + +K N LG LG + M
Sbjct: 402 KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHM 456
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 204/403 (50%), Gaps = 55/403 (13%)
Query: 31 LENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCA---YGKMNYASLVFDQINAPDS 87
++ C +F Q+KQ+ + +G L +LL+ CA +G +++A +F I P +
Sbjct: 10 IQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLER-CAISPFGDLSFAVQIFRYIPKPLT 68
Query: 88 FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAP------DKFTYPFVIKAC---IASNAF 138
WN +IRG S P A ++ ML + + D T F +KAC + S+A
Sbjct: 69 NDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAM 128
Query: 139 DFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGL 198
D +H + D+ + T+++ Y K G+ L
Sbjct: 129 D---QLHCQINRRGLSADSLLCTTLLDAYSKNGD-------------------------L 160
Query: 199 IACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLV 258
I+ A ++FDEMP ++V SW A+I G V R EA +L++ M+ E +R +E T+V
Sbjct: 161 IS------AYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVV 214
Query: 259 SLVSACTEMGSLKLGKWI-HDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT- 316
+ + AC+ +G +K G+ I H Y+ N I + A IDMYSKCG +D A+ VF T
Sbjct: 215 AALGACSHLGDVKEGENIFHGYSNDNVI-----VSNAAIDMYSKCGFVDKAYQVFEQFTG 269
Query: 317 ERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
++++ TWNTMIT VHG + AL++F ++E + PD V+++ L+AC H VE G
Sbjct: 270 KKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLS 329
Query: 377 YFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
F+ M G+ ++HY C+V+L + L E + +MS+
Sbjct: 330 VFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSM 371
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 142/350 (40%), Gaps = 58/350 (16%)
Query: 21 RFDSQQALVTLENCCNF---KQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASL 77
R D+ TL+ C + Q+H +I R GL+ D +L LL G + A
Sbjct: 106 RVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYK 165
Query: 78 VFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNA 137
+FD++ D +WN +I G A+ L+K M +G + T + AC
Sbjct: 166 LFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGD 225
Query: 138 FDFGRAVHALAIKMRFWG----DTYVQNTMMNFYFKCGNEEDGCKVFDKMRG-CSVVSWT 192
G + F G + V N ++ Y KCG + +VF++ G SVV+W
Sbjct: 226 VKEGENI--------FHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWN 277
Query: 193 TLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRP 252
T+I G G+ RA E+FD++ ++P
Sbjct: 278 TMITGFAVHGEAHRALEIFDKLEDN-------------------------------GIKP 306
Query: 253 NEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAW-IV 311
++ + ++ ++AC G ++ G + + G+E ++D+ S+ G L +A I+
Sbjct: 307 DDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDII 366
Query: 312 FGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGV 361
+ + W +++ G SE ++ ++E A + + +GV
Sbjct: 367 CSMSMIPDPVLWQSLL------GASE----IYSDVEMAEIASREIKEMGV 406
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 188/394 (47%), Gaps = 33/394 (8%)
Query: 38 KQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGC 97
K L+ +HG I SGL DQ+ +++ G + AS +F I PD WNVMI G
Sbjct: 123 KGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGY 182
Query: 98 TLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDT 157
G + + LF M +G P+ +T + I + +VHA +K+ +
Sbjct: 183 GCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHS 242
Query: 158 YVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK 217
YV ++N Y +C C VF+ +
Sbjct: 243 YVGCALVNMYSRCMCIASAC-------------------------------SVFNSISEP 271
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
++V+ +++I GY +C EA LF +++ +P+ + ++ +C E+ GK +H
Sbjct: 272 DLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVH 331
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSE 337
Y I+ G+EL + +ALIDMYSKCG L A +F + E+N+ ++N++I LG+HG +
Sbjct: 332 SYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFAS 391
Query: 338 EALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCM 397
A + F E+ + ++PD +TF +L C H + +G+ F M +GI P EHYV M
Sbjct: 392 TAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYM 451
Query: 398 VELYTGDSELDEVYTSEEAMSLSMKTNQNVVELL 431
V+L +L+E + E MSL + ++ L
Sbjct: 452 VKLMGMAGKLEEAF--EFVMSLQKPIDSGILGAL 483
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%)
Query: 207 AREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTE 266
AR++FD P ++V W ++I Y K + LF + + RP+ FT L +E
Sbjct: 59 ARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSE 118
Query: 267 MGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTM 326
K + IH AI +G+ G+A++ YSK G + +A +F + + +LA WN M
Sbjct: 119 SFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVM 178
Query: 327 ITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACV 366
I G G ++ ++LF M+ P+ T V + S +
Sbjct: 179 ILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLI 218
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 117/371 (31%), Positives = 177/371 (47%), Gaps = 40/371 (10%)
Query: 36 NFKQLKQVHGRIIRSGLTHD-QVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMI 94
N KQ+H IRSGL D + L + A G ++ VFD++ +W +I
Sbjct: 284 NLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALI 343
Query: 95 RG----CTLSGSPEHALVLFKEMLLKGFA-PDKFTYPFVIKACIASNAFDFGRAVHALAI 149
G C L+ A+ LF EM+ +G P+ FT+ KAC + G+ V A
Sbjct: 344 TGYMKNCNLA---TEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400
Query: 150 KMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRARE 209
K ++ V N++++ + K ED A+
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMED-------------------------------AQR 429
Query: 210 VFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGS 269
F+ + KN+VS+ +DG + +AF L + + + FT SL+S +GS
Sbjct: 430 AFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGS 489
Query: 270 LKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITS 329
++ G+ IH +K G+ + ALI MYSKCGS+D A VF M RN+ +W +MIT
Sbjct: 490 IRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITG 549
Query: 330 LGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISP 389
HG + L+ F +M + V P+ VT+V +LSAC H+ V EG R+F+ M E + I P
Sbjct: 550 FAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKP 609
Query: 390 ILEHYVCMVEL 400
+EHY CMV+L
Sbjct: 610 KMEHYACMVDL 620
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 166/350 (47%), Gaps = 41/350 (11%)
Query: 36 NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFD---QINAPDSFTWNV 92
+F+ K VH R+I + D VL L+ G A VF+ + D +W+
Sbjct: 77 DFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSA 136
Query: 93 MIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMR 152
M+ +G A+ +F E L G P+ + Y VI+AC S+ GR
Sbjct: 137 MMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVT-------- 188
Query: 153 FWGDTYVQNTMMNFYFKCGN-EEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVF 211
+ F K G+ E D C GCS++ + G + A +VF
Sbjct: 189 -----------LGFLMKTGHFESDVCV------GCSLID--MFVKGE---NSFENAYKVF 226
Query: 212 DEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLK 271
D+M NVV+WT MI ++ P EA F M + ++FTL S+ SAC E+ +L
Sbjct: 227 DKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLS 286
Query: 272 LGKWIHDYAIKNGIELGPFLGTALIDMYSKC---GSLDDAWIVFGIMTERNLATWNTMIT 328
LGK +H +AI++G L + +L+DMY+KC GS+DD VF M + ++ +W +IT
Sbjct: 287 LGKQLHSWAIRSG--LVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALIT 344
Query: 329 SLGVH-GLSEEALDLFKEM-EKANVVPDAVTFVGVLSACVHMHDVEEGER 376
+ L+ EA++LF EM + +V P+ TF AC ++ D G++
Sbjct: 345 GYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQ 394
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 126/283 (44%), Gaps = 31/283 (10%)
Query: 100 SGSPEHALVLFKEMLLKGFAP-DKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTY 158
+G A+ M G P D T+ ++K+CI + F G+ VHA I+ D+
Sbjct: 39 AGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSV 98
Query: 159 VQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKN 218
+ N++++ Y K G+ VF+ MR ++
Sbjct: 99 LYNSLISLYSKSGDSAKAEDVFETMR----------------------------RFGKRD 130
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
VVSW+AM+ Y R ++A +F + PN++ +++ AC+ + +G+
Sbjct: 131 VVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLG 190
Query: 279 YAIKNG-IELGPFLGTALIDMYSKC-GSLDDAWIVFGIMTERNLATWNTMITSLGVHGLS 336
+ +K G E +G +LIDM+ K S ++A+ VF M+E N+ TW MIT G
Sbjct: 191 FLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFP 250
Query: 337 EEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFS 379
EA+ F +M + D T V SAC + ++ G++ S
Sbjct: 251 REAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHS 293
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 20/194 (10%)
Query: 236 VEAFDLFEGMQIENVRP-NEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTA 294
V A DL M + +RP + T SL+ +C +LGK +H I+ IE L +
Sbjct: 46 VSALDL---MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNS 102
Query: 295 LIDMYSKCGSLDDAWIVFGIMT---ERNLATWNTMITSLGVHGLSEEALDLFKEMEKANV 351
LI +YSK G A VF M +R++ +W+ M+ G +G +A+ +F E + +
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162
Query: 352 VPDAVTFVGVLSACVHMHDVEEGERY--FSLMTEHYGISPILEHYVC----MVELYT-GD 404
VP+ + V+ AC + V G F + T H+ E VC +++++ G+
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHF------ESDVCVGCSLIDMFVKGE 216
Query: 405 SELDEVYTSEEAMS 418
+ + Y + MS
Sbjct: 217 NSFENAYKVFDKMS 230
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 55/111 (49%)
Query: 22 FDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQ 81
F L + N + ++ +Q+H ++++ GL+ +Q + L+ G ++ AS VF+
Sbjct: 475 FTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNF 534
Query: 82 INAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKAC 132
+ + +W MI G G L F +M+ +G P++ TY ++ AC
Sbjct: 535 MENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSAC 585
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 185/373 (49%), Gaps = 34/373 (9%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+Q HG + ++ V++ L+ G ++ + VF + D +WN MI +
Sbjct: 338 RQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQN 397
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIK--MRFWGDTY 158
G + L+L EM +GF D T ++ A + G+ HA I+ ++F G
Sbjct: 398 GLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG--- 454
Query: 159 VQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKN 218
+ + +++ Y K G K+F+ G +R +
Sbjct: 455 MNSYLIDMYSKSGLIRISQKLFE------------------GSGYAERDQ---------- 486
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
+W +MI GY + + F +F M +N+RPN T+ S++ AC+++GS+ LGK +H
Sbjct: 487 -ATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHG 545
Query: 279 YAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEE 338
++I+ ++ F+ +AL+DMYSK G++ A +F ERN T+ TMI G HG+ E
Sbjct: 546 FSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGER 605
Query: 339 ALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMV 398
A+ LF M+++ + PDA+TFV VLSAC + ++EG + F M E Y I P EHY C+
Sbjct: 606 AISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCIT 665
Query: 399 ELYTGDSELDEVY 411
++ ++E Y
Sbjct: 666 DMLGRVGRVNEAY 678
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 154/347 (44%), Gaps = 34/347 (9%)
Query: 52 LTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFK 111
LT +R L C G A +FD I P + WN +I G + P AL+ +
Sbjct: 35 LTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYS 94
Query: 112 EMLLKGFAP----DKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFY 167
M K AP D +TY +KAC + G+AVH I+ V N++MN Y
Sbjct: 95 RM--KKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMY 152
Query: 168 FKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMID 227
C N D C + D R+VFD M KNVV+W +I
Sbjct: 153 VSCLNAPD-------------------------CFEYDVVRKVFDNMRRKNVVAWNTLIS 187
Query: 228 GYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIEL 287
YVK R EA F M V+P+ + V++ A + S+K + +K G E
Sbjct: 188 WYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEY 247
Query: 288 GP--FLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKE 345
F+ ++ I MY++ G ++ + VF ERN+ WNTMI + E+++LF E
Sbjct: 248 VKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLE 307
Query: 346 -MEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPIL 391
+ +V D VT++ SA + VE G ++ +++++ PI+
Sbjct: 308 AIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIV 354
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 136/313 (43%), Gaps = 37/313 (11%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAP--DSFTWNVMIRGCT 98
KQ H +IR G+ + + L+ G + + +F+ D TWN MI G T
Sbjct: 439 KQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYT 497
Query: 99 LSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTY 158
+G E ++F++ML + P+ T ++ AC + D G+ +H +I+ + +
Sbjct: 498 QNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVF 557
Query: 159 VQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKN 218
V + +++ Y K G + A ++F + +N
Sbjct: 558 VASALVDMYSKAG-------------------------------AIKYAEDMFSQTKERN 586
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG-KWIH 277
V++T MI GY + A LF MQ ++P+ T V+++SAC+ G + G K
Sbjct: 587 SVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFE 646
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGSLDDAW-IVFGIMTERNLAT-WNTMITSLGVHGL 335
+ I+ + DM + G +++A+ V G+ E N+A W +++ S +HG
Sbjct: 647 EMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGE 706
Query: 336 SEEALDLFKEMEK 348
E A + + + K
Sbjct: 707 LELAETVSERLAK 719
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 184/388 (47%), Gaps = 32/388 (8%)
Query: 34 CCNFKQL-KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA-PDSFTWN 91
CC+ L KQ+H + G + + + G + A VF ++ D +WN
Sbjct: 150 CCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWN 209
Query: 92 VMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKM 151
MI AL L+KEM+ KGF D FT V+ A + + GR H IK
Sbjct: 210 SMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKA 269
Query: 152 RFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVF 211
F +++V + +++FY KCG GC G D + +VF
Sbjct: 270 GFHQNSHVGSGLIDFYSKCG-------------GCD--------------GMYD-SEKVF 301
Query: 212 DEMPSKNVVSWTAMIDGY-VKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSL 270
E+ S ++V W MI GY + + EA F MQ RP++ + V + SAC+ + S
Sbjct: 302 QEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSP 361
Query: 271 KLGKWIHDYAIKNGIELGPF-LGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITS 329
K IH AIK+ I + ALI +Y K G+L DA VF M E N ++N MI
Sbjct: 362 SQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKG 421
Query: 330 LGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISP 389
HG EAL L++ M + + P+ +TFV VLSAC H V+EG+ YF+ M E + I P
Sbjct: 422 YAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEP 481
Query: 390 ILEHYVCMVELYTGDSELDEVYTSEEAM 417
EHY CM++L +L+E +AM
Sbjct: 482 EAEHYSCMIDLLGRAGKLEEAERFIDAM 509
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 159/344 (46%), Gaps = 36/344 (10%)
Query: 71 KMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIK 130
K++ A +FD+I PD+ ++N +I G + A+VLFK M GF D FT +I
Sbjct: 89 KIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIA 148
Query: 131 ACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVS 190
AC + D + +H ++ F + V N + +Y K G + VF M
Sbjct: 149 ACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGM------- 199
Query: 191 WTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENV 250
DE+ ++ VSW +MI Y + + +A L++ M +
Sbjct: 200 ---------------------DEL--RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGF 236
Query: 251 RPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLD---D 307
+ + FTL S+++A T + L G+ H IK G +G+ LID YSKCG D D
Sbjct: 237 KIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYD 296
Query: 308 AWIVFGIMTERNLATWNTMITSLGVH-GLSEEALDLFKEMEKANVVPDAVTFVGVLSACV 366
+ VF + +L WNTMI+ ++ LSEEA+ F++M++ PD +FV V SAC
Sbjct: 297 SEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACS 356
Query: 367 HMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEV 410
++ + ++ L + + S + ++ LY L +
Sbjct: 357 NLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDA 400
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 169/368 (45%), Gaps = 14/368 (3%)
Query: 120 PDKF-TYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCK 178
P KF T+ ++ +A G+++HAL +K TY+ N +N Y KCG
Sbjct: 5 PWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARA 64
Query: 179 VFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEA 238
F +V S+ ++ K+ AR++FDE+P + VS+ +I GY + A
Sbjct: 65 AFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAA 124
Query: 239 FDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDM 298
LF+ M+ + FTL L++AC + + L K +H +++ G + + A +
Sbjct: 125 MVLFKRMRKLGFEVDGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTY 182
Query: 299 YSKCGSLDDAWIVFGIMTE-RNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVT 357
YSK G L +A VF M E R+ +WN+MI + G H +AL L+KEM D T
Sbjct: 183 YSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFT 242
Query: 358 FVGVLSACVHMHDVEEGERYFSLMTE-------HYGISPILEHYVC--MVELYTGDSELD 408
VL+A + + G ++ + + H G I + C +Y +
Sbjct: 243 LASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQ 302
Query: 409 EVYTSEEAMSLSMKTNQNVVELLQESKLTSVDDIKEVINKHYGDLNFSKLDLDHSSVSSV 468
E+ + + + +M + ++ E L E + S ++ + ++ D +F + S++SS
Sbjct: 303 EILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRP-DDCSFVCVTSACSNLSSP 361
Query: 469 PETQELHA 476
+ +++H
Sbjct: 362 SQCKQIHG 369
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 42/195 (21%)
Query: 39 QLKQVHGRIIRSGLTHDQVLLRK-LLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGC 97
Q KQ+HG I+S + +++ + L+ G + A VFD++ ++ ++N MI+G
Sbjct: 363 QCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGY 422
Query: 98 TLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDT 157
G AL+L++ ML G AP+K T+ V+ AC
Sbjct: 423 AQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACA------------------------ 458
Query: 158 YVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVS-----WTTLIAGLIACGKVDRAREVFD 212
CG ++G + F+ M+ + ++ +I L GK++ A D
Sbjct: 459 -----------HCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFID 507
Query: 213 EMPSK-NVVSWTAMI 226
MP K V+W A++
Sbjct: 508 AMPYKPGSVAWAALL 522
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 204/430 (47%), Gaps = 38/430 (8%)
Query: 37 FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRG 96
F++ + +HG ++ SGL ++Q++ L+ G+M+ + V Q+ D WN +I G
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420
Query: 97 CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKAC-IASNAFDFGRAVHALAIKMRFWG 155
P+ AL F+ M ++G + + T V+ AC + + + G+ +HA + F
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 480
Query: 156 DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMP 215
D +V+N+++ Y KCG+ + ++++F+ +
Sbjct: 481 DEHVKNSLITMYAKCGD-------------------------------LSSSQDLFNGLD 509
Query: 216 SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKW 275
++N+++W AM+ E L M+ V ++F+ +SA ++ L+ G+
Sbjct: 510 NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ 569
Query: 276 IHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGL 335
+H A+K G E F+ A DMYSKCG + + + R+L +WN +I++LG HG
Sbjct: 570 LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 629
Query: 336 SEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYV 395
EE F EM + + P VTFV +L+AC H V++G Y+ ++ +G+ P +EH +
Sbjct: 630 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCI 689
Query: 396 CMVELYTGDSELDEVYTSEEAMSLSMKTNQNVVELLQESKLTSVDDIKEVINKHYGDLNF 455
C+++L L E T M MK N +L+ S L S + N
Sbjct: 690 CVIDLLGRSGRLAEAETFISKM--PMKPN----DLVWRSLLASCKIHGNLDRGRKAAENL 743
Query: 456 SKLDLDHSSV 465
SKL+ + SV
Sbjct: 744 SKLEPEDDSV 753
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 138/299 (46%), Gaps = 32/299 (10%)
Query: 86 DSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNA-FDFGRAV 144
+ +WN M+ G G + F++M G P F ++ AC S + F G V
Sbjct: 5 NEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQV 64
Query: 145 HALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKV 204
H K D YV +++ Y + GL++C
Sbjct: 65 HGFVAKSGLLSDVYVSTAILHLYG--------------------------VYGLVSC--- 95
Query: 205 DRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSAC 264
+R+VF+EMP +NVVSWT+++ GY P E D+++GM+ E V NE ++ ++S+C
Sbjct: 96 --SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC 153
Query: 265 TEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWN 324
+ LG+ I +K+G+E + +LI M G++D A +F M+ER+ +WN
Sbjct: 154 GLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWN 213
Query: 325 TMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTE 383
++ + +G EE+ +F M + + ++ T +LS H+ + G L+ +
Sbjct: 214 SIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK 272
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 145/333 (43%), Gaps = 31/333 (9%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+Q+ G++++SGL + L+ + G ++YA+ +FDQ++ D+ +WN + +
Sbjct: 163 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 222
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G E + +F M + T ++ + +GR +H L +KM F V
Sbjct: 223 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 282
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
NT++ Y G+ A VF +MP+K+++
Sbjct: 283 NTLLRMY-------------------------------AGAGRSVEANLVFKQMPTKDLI 311
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
SW +++ +V R ++A L M N T S ++AC + G+ +H
Sbjct: 312 SWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV 371
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEAL 340
+ +G+ +G AL+ MY K G + ++ V M R++ WN +I ++AL
Sbjct: 372 VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKAL 431
Query: 341 DLFKEMEKANVVPDAVTFVGVLSACVHMHDVEE 373
F+ M V + +T V VLSAC+ D+ E
Sbjct: 432 AAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 464
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 149/339 (43%), Gaps = 31/339 (9%)
Query: 37 FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRG 96
F++ QVHG + +SGL D + +L YG ++ + VF+++ + +W ++ G
Sbjct: 58 FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVG 117
Query: 97 CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGD 156
+ G PE + ++K M +G ++ + VI +C GR + +K
Sbjct: 118 YSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESK 177
Query: 157 TYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPS 216
V+N+ LI+ L + G VD A +FD+M
Sbjct: 178 LAVENS-------------------------------LISMLGSMGNVDYANYIFDQMSE 206
Query: 217 KNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWI 276
++ +SW ++ Y + E+F +F M+ + N T+ +L+S + K G+ I
Sbjct: 207 RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGI 266
Query: 277 HDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLS 336
H +K G + + L+ MY+ G +A +VF M ++L +WN+++ S G S
Sbjct: 267 HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRS 326
Query: 337 EEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGE 375
+AL L M + + VTF L+AC E+G
Sbjct: 327 LDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGR 365
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 1/164 (0%)
Query: 214 MPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSL-KL 272
MP +N VSW M+ G V+ +E + F M ++P+ F + SLV+AC GS+ +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 273 GKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGV 332
G +H + K+G+ ++ TA++ +Y G + + VF M +RN+ +W +++
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 333 HGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
G EE +D++K M V + + V+S+C + D G +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 164
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 190/380 (50%), Gaps = 39/380 (10%)
Query: 69 YGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFV 128
+GK++ A +F Q+ + +W MI G + AL LFK ML + V
Sbjct: 172 FGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCV 231
Query: 129 IKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSV 188
I AC + AF G VH L IK+ F + YV +++ FY C
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCK----------------- 274
Query: 189 VSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE 248
++ +R+VFDE + V WTA++ GY ++ +A +F GM
Sbjct: 275 --------------RIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRN 320
Query: 249 NVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDA 308
++ PN+ T S +++C+ +G+L GK +H A+K G+E F+G +L+ MYS G+++DA
Sbjct: 321 SILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDA 380
Query: 309 WIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHM 368
VF + ++++ +WN++I HG + A +F +M + N PD +TF G+LSAC H
Sbjct: 381 VSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHC 440
Query: 369 HDVEEGERYFSLMTEHYGISPI---LEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQ 425
+E+G + F M+ GI+ I ++HY CMV++ +L E E M + K N+
Sbjct: 441 GFLEKGRKLFYYMSS--GINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVV--KPNE 496
Query: 426 NV-VELLQESKLTSVDDIKE 444
V + LL ++ S D E
Sbjct: 497 MVWLALLSACRMHSDVDRGE 516
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 160/336 (47%), Gaps = 13/336 (3%)
Query: 43 VHGRIIRSGLTHDQVLLRKLL--QHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+HG+ RS + R++L H + +++ A VF+Q+ +P + MI G T S
Sbjct: 21 IHGKCYRSFSVTVEFQNREVLICNHLLSR-RIDEAREVFNQVPSPHVSLYTKMITGYTRS 79
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHAL-AIKMRFWGDTYV 159
AL LF EM ++ D ++ +I C+ D AV + R
Sbjct: 80 NRLVDALNLFDEMPVR----DVVSWNSMISGCVECG--DMNTAVKLFDEMPER---SVVS 130
Query: 160 QNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNV 219
M+N F+ G + ++F +M +W +++ G + GKVD A ++F +MP KNV
Sbjct: 131 WTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNV 190
Query: 220 VSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDY 279
+SWT MI G + +R EA DLF+ M ++ +++AC + +G +H
Sbjct: 191 ISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGL 250
Query: 280 AIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEA 339
IK G ++ +LI Y+ C + D+ VF +A W +++ ++ E+A
Sbjct: 251 IIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDA 310
Query: 340 LDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGE 375
L +F M + +++P+ TF L++C + ++ G+
Sbjct: 311 LSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGK 346
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 145/335 (43%), Gaps = 63/335 (18%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSG 101
QVHG II+ G +++ + L+ ++ + VFD+ W ++ G +L+
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNK 305
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQN 161
E AL +F ML P++ T+ + +C A D+G+ +H +A+K+ D +V N
Sbjct: 306 KHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGN 365
Query: 162 TMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVS 221
+++ Y GN D VF K+ S+VSW ++I G C + R +
Sbjct: 366 SLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVG---CAQHGRGK------------- 409
Query: 222 WTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAI 281
W AF +F M N P+E T L+SAC+ G L+ G+ + Y +
Sbjct: 410 W---------------AFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLF-YYM 453
Query: 282 KNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALD 341
+GI +R + + M+ LG G +EA +
Sbjct: 454 SSGIN----------------------------HIDRKIQHYTCMVDILGRCGKLKEAEE 485
Query: 342 LFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
L +E+ V P+ + ++ +LSAC DV+ GE+
Sbjct: 486 L---IERMVVKPNEMVWLALLSACRMHSDVDRGEK 517
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 97/253 (38%), Gaps = 69/253 (27%)
Query: 12 VPHFNTPTTRFDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGK 71
+P+ +T + +S AL TL+ K++HG ++ GL D + L+ G
Sbjct: 323 LPNQSTFASGLNSCSALGTLD------WGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGN 376
Query: 72 MNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKA 131
+N A VF +I +WN +I GC G + A V+F +M+ PD+ T+ ++ A
Sbjct: 377 VNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSA 436
Query: 132 CIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSW 191
C CG E G K+F M
Sbjct: 437 CS-----------------------------------HCGFLEKGRKLFYYMSS------ 455
Query: 192 TTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVR 251
+DR + +T M+D +C + EA +L E M V+
Sbjct: 456 --------GINHIDR-----------KIQHYTCMVDILGRCGKLKEAEELIERMV---VK 493
Query: 252 PNEFTLVSLVSAC 264
PNE ++L+SAC
Sbjct: 494 PNEMVWLALLSAC 506
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 204/430 (47%), Gaps = 38/430 (8%)
Query: 37 FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRG 96
F++ + +HG ++ SGL ++Q++ L+ G+M+ + V Q+ D WN +I G
Sbjct: 378 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 437
Query: 97 CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKAC-IASNAFDFGRAVHALAIKMRFWG 155
P+ AL F+ M ++G + + T V+ AC + + + G+ +HA + F
Sbjct: 438 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 497
Query: 156 DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMP 215
D +V+N+++ Y KCG+ + ++++F+ +
Sbjct: 498 DEHVKNSLITMYAKCGD-------------------------------LSSSQDLFNGLD 526
Query: 216 SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKW 275
++N+++W AM+ E L M+ V ++F+ +SA ++ L+ G+
Sbjct: 527 NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ 586
Query: 276 IHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGL 335
+H A+K G E F+ A DMYSKCG + + + R+L +WN +I++LG HG
Sbjct: 587 LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 646
Query: 336 SEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYV 395
EE F EM + + P VTFV +L+AC H V++G Y+ ++ +G+ P +EH +
Sbjct: 647 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCI 706
Query: 396 CMVELYTGDSELDEVYTSEEAMSLSMKTNQNVVELLQESKLTSVDDIKEVINKHYGDLNF 455
C+++L L E T M MK N +L+ S L S + N
Sbjct: 707 CVIDLLGRSGRLAEAETFISKM--PMKPN----DLVWRSLLASCKIHGNLDRGRKAAENL 760
Query: 456 SKLDLDHSSV 465
SKL+ + SV
Sbjct: 761 SKLEPEDDSV 770
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 147/316 (46%), Gaps = 32/316 (10%)
Query: 69 YGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFV 128
+G++ A +FD + + +WN M+ G G + F++M G P F +
Sbjct: 5 FGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASL 64
Query: 129 IKACIASNA-FDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCS 187
+ AC S + F G VH K D YV +++ Y
Sbjct: 65 VTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYG------------------- 105
Query: 188 VVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQI 247
+ GL++C +R+VF+EMP +NVVSWT+++ GY P E D+++GM+
Sbjct: 106 -------VYGLVSC-----SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRG 153
Query: 248 ENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDD 307
E V NE ++ ++S+C + LG+ I +K+G+E + +LI M G++D
Sbjct: 154 EGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDY 213
Query: 308 AWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVH 367
A +F M+ER+ +WN++ + +G EE+ +F M + + ++ T +LS H
Sbjct: 214 ANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 273
Query: 368 MHDVEEGERYFSLMTE 383
+ + G L+ +
Sbjct: 274 VDHQKWGRGIHGLVVK 289
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 145/333 (43%), Gaps = 31/333 (9%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+Q+ G++++SGL + L+ + G ++YA+ +FDQ++ D+ +WN + +
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G E + +F M + T ++ + +GR +H L +KM F V
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
NT++ Y G+ A VF +MP+K+++
Sbjct: 300 NTLLRMY-------------------------------AGAGRSVEANLVFKQMPTKDLI 328
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
SW +++ +V R ++A L M N T S ++AC + G+ +H
Sbjct: 329 SWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV 388
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEAL 340
+ +G+ +G AL+ MY K G + ++ V M R++ WN +I ++AL
Sbjct: 389 VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKAL 448
Query: 341 DLFKEMEKANVVPDAVTFVGVLSACVHMHDVEE 373
F+ M V + +T V VLSAC+ D+ E
Sbjct: 449 AAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 481
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 149/339 (43%), Gaps = 31/339 (9%)
Query: 37 FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRG 96
F++ QVHG + +SGL D + +L YG ++ + VF+++ + +W ++ G
Sbjct: 75 FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVG 134
Query: 97 CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGD 156
+ G PE + ++K M +G ++ + VI +C GR + +K
Sbjct: 135 YSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESK 194
Query: 157 TYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPS 216
V+N+ LI+ L + G VD A +FD+M
Sbjct: 195 LAVENS-------------------------------LISMLGSMGNVDYANYIFDQMSE 223
Query: 217 KNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWI 276
++ +SW ++ Y + E+F +F M+ + N T+ +L+S + K G+ I
Sbjct: 224 RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGI 283
Query: 277 HDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLS 336
H +K G + + L+ MY+ G +A +VF M ++L +WN+++ S G S
Sbjct: 284 HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRS 343
Query: 337 EEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGE 375
+AL L M + + VTF L+AC E+G
Sbjct: 344 LDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGR 382
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 204/445 (45%), Gaps = 72/445 (16%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSG 101
Q+ ++++GL D V+ + G A VFD+++ D +WN ++ G + G
Sbjct: 195 QLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEG 254
Query: 102 S-PEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
+ A+V+F++M+ +G D ++ VI C R +H L IK + V
Sbjct: 255 TFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVG 314
Query: 161 NTMMNFYFKCG--------------------------NEEDGCKVFDKMRGCSVVSWTTL 194
N +M+ Y KCG N++D +F MR V
Sbjct: 315 NILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVT 374
Query: 195 IAGLIACGK---------------------------------------VDRAREVFDEMP 215
GLI K ++ A++ F+++
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDIT 434
Query: 216 SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACT--EMGSLKLG 273
+ ++SW AMI G+ + EA +F E + PNE+T S+++A E S+K G
Sbjct: 435 FREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQG 493
Query: 274 KWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVH 333
+ H + +K G+ P + +AL+DMY+K G++D++ VF M+++N W ++I++ H
Sbjct: 494 QRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSH 553
Query: 334 GLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEH 393
G E ++LF +M K NV PD VTF+ VL+AC V++G F++M E Y + P EH
Sbjct: 554 GDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEH 613
Query: 394 YVCMVELYTGDSELDEVYTSEEAMS 418
Y CMV++ L E +EE MS
Sbjct: 614 YSCMVDMLGRAGRLKE---AEELMS 635
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 152/346 (43%), Gaps = 40/346 (11%)
Query: 36 NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIR 95
+ K+ Q+HG SG T + ++ G+ + A +F+ + PD +WN ++
Sbjct: 91 DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILS 150
Query: 96 GCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWG 155
G + AL M G D FTY + C+ S F G + + +K
Sbjct: 151 GFD---DNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLES 207
Query: 156 DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMP 215
D V N+ + Y + G+ RG AR VFDEM
Sbjct: 208 DLVVGNSFITMYSRSGS----------FRG---------------------ARRVFDEMS 236
Query: 216 SKNVVSWTAMIDGYVK-CQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGK 274
K+++SW +++ G + EA +F M E V + + S+++ C LKL +
Sbjct: 237 FKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLAR 296
Query: 275 WIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHG 334
IH IK G E +G L+ YSKCG L+ VF M+ERN+ +W TMI+S
Sbjct: 297 QIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS----- 351
Query: 335 LSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSL 380
++A+ +F M V P+ VTFVG+++A ++EG + L
Sbjct: 352 NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGL 397
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 147/357 (41%), Gaps = 46/357 (12%)
Query: 69 YGKMNYASLVFD---QINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAP---DK 122
Y A +FD Q NA S N I SP AL +FKE L G+ D+
Sbjct: 21 YSPYRIAHKLFDGSSQRNATTSI--NHSISESLRRNSPARALSIFKENLQLGYFGRHMDE 78
Query: 123 FTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDK 182
T +KAC G +H + F V N +M Y K G ++ +F+
Sbjct: 79 VTLCLALKACRGD--LKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFEN 136
Query: 183 MRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLF 242
+ VVSW T+++G FD+ N + A +
Sbjct: 137 LVDPDVVSWNTILSG-------------FDD----NQI-----------------ALNFV 162
Query: 243 EGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKC 302
M+ V + FT + +S C LG + +K G+E +G + I MYS+
Sbjct: 163 VRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRS 222
Query: 303 GSLDDAWIVFGIMTERNLATWNTMITSLGVHG-LSEEALDLFKEMEKANVVPDAVTFVGV 361
GS A VF M+ +++ +WN++++ L G EA+ +F++M + V D V+F V
Sbjct: 223 GSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSV 282
Query: 362 LSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMS 418
++ C H D++ + L + G +LE ++ Y+ L+ V + MS
Sbjct: 283 ITTCCHETDLKLARQIHGLCIKR-GYESLLEVGNILMSRYSKCGVLEAVKSVFHQMS 338
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 165/336 (49%), Gaps = 35/336 (10%)
Query: 78 VFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNA 137
VF+ + D ++N +I G SG E AL + +EM PD FT V+ I S
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP--IFSEY 255
Query: 138 FDF--GRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLI 195
D G+ +H I+ D Y+ +++++ Y K ED +VF ++
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY----------- 304
Query: 196 AGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEF 255
++ +SW +++ GYV+ R EA LF M V+P
Sbjct: 305 --------------------CRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAV 344
Query: 256 TLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM 315
S++ AC + +L LGK +H Y ++ G F+ +AL+DMYSKCG++ A +F M
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404
Query: 316 TERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGE 375
+ +W +I +HG EA+ LF+EM++ V P+ V FV VL+AC H+ V+E
Sbjct: 405 NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAW 464
Query: 376 RYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVY 411
YF+ MT+ YG++ LEHY + +L +L+E Y
Sbjct: 465 GYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAY 500
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 172/348 (49%), Gaps = 16/348 (4%)
Query: 39 QLKQVHGRIIRS-GLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGC 97
Q KQ+H + IR+ L+H + ++ ++ A L+F + +P W +IR
Sbjct: 23 QAKQLHAQFIRTQSLSHTSASI--VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCF 80
Query: 98 TLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDT 157
T AL F EM G PD +P V+K+C FG +VH +++ D
Sbjct: 81 TDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL 140
Query: 158 YVQNTMMNFYFKC---GNEEDGCKVFDKM------RGCSVVSWTTLIAGLIACGKVDRAR 208
Y N +MN Y K G++ VFD+M G V T I +D R
Sbjct: 141 YTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPF----GIDSVR 196
Query: 209 EVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMG 268
VF+ MP K+VVS+ +I GY + +A + M +++P+ FTL S++ +E
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYV 256
Query: 269 SLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMIT 328
+ GK IH Y I+ GI+ ++G++L+DMY+K ++D+ VF + R+ +WN+++
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 329 SLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
+G EAL LF++M A V P AV F V+ AC H+ + G++
Sbjct: 317 GYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQ 364
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 133/296 (44%), Gaps = 35/296 (11%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
K++HG +IR G+ D + L+ ++ + VF ++ D +WN ++ G +
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 321
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G AL LF++M+ P + VI AC G+ +H ++ F + ++
Sbjct: 322 GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIA 381
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
+ +++ Y KCGN + K+FD+M VSWT +I G G
Sbjct: 382 SALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHG------------------ 423
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
G+ EA LFE M+ + V+PN+ V++++AC+ +G L W + +
Sbjct: 424 ------HGH-------EAVSLFEEMKRQGVKPNQVAFVAVLTACSHVG-LVDEAWGYFNS 469
Query: 281 IKNGIELGPFLG--TALIDMYSKCGSLDDAWIVFGIM-TERNLATWNTMITSLGVH 333
+ L L A+ D+ + G L++A+ M E + W+T+++S VH
Sbjct: 470 MTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 198/462 (42%), Gaps = 77/462 (16%)
Query: 12 VPHFNTPTTRFDSQQALVTLENC---CNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCA 68
V H +P T S V L+ C N + +H +++ L + LL
Sbjct: 100 VDHAVSPDTSVLS----VVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKR 155
Query: 69 YGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFV 128
GK++ + VF ++ ++ TW +I G +G + L F EM D +T+
Sbjct: 156 VGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIA 215
Query: 129 IKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKC------------------ 170
+KAC +G+A+H I F V N++ Y +C
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275
Query: 171 -------------GNEEDGCKVFDKMRG------------------------------CS 187
G E + F KMR C+
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCN 335
Query: 188 VVSW---------TTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEA 238
V+S +++ CG + A +F M ++++SW+ +I GY + E
Sbjct: 336 VLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEG 395
Query: 239 FDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDM 298
F F M+ +P +F L SL+S M ++ G+ +H A+ G+E + ++LI+M
Sbjct: 396 FKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINM 455
Query: 299 YSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTF 358
YSKCGS+ +A ++FG ++ + MI HG S+EA+DLF++ K PD+VTF
Sbjct: 456 YSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTF 515
Query: 359 VGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVEL 400
+ VL+AC H ++ G YF++M E Y + P EHY CMV+L
Sbjct: 516 ISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDL 557
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 141/309 (45%), Gaps = 33/309 (10%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLL--KGFAPDKFTYPF 127
G + A VFD++ D +W +I+ + + + AL+LF M + +PD
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 128 VIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCS 187
V+KAC S+ +G ++HA A+K YV +++++ Y + G + C+VF +M +
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 188 VVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQI 247
V+WT +I GL+ G+ F EM +S
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELS-------------------------- 207
Query: 248 ENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDD 307
+ +T + AC + +K GK IH + I G + +L MY++CG + D
Sbjct: 208 -----DTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQD 262
Query: 308 AWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVH 367
+F M+ER++ +W ++I + G +A++ F +M + V P+ TF + SAC
Sbjct: 263 GLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACAS 322
Query: 368 MHDVEEGER 376
+ + GE+
Sbjct: 323 LSRLVWGEQ 331
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 99/180 (55%), Gaps = 2/180 (1%)
Query: 198 LIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN--VRPNEF 255
LI G + AR+VFD+MP ++VSWT++I YV EA LF M++ + V P+
Sbjct: 50 LINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTS 109
Query: 256 TLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM 315
L ++ AC + ++ G+ +H YA+K + ++G++L+DMY + G +D + VF M
Sbjct: 110 VLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEM 169
Query: 316 TERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGE 375
RN TW +IT L G +E L F EM ++ + D TF L AC + V+ G+
Sbjct: 170 PFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGK 229
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 6/190 (3%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+QVH + GL + + L+ G + AS++F + + D + MI G
Sbjct: 431 RQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEH 490
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHAL---AIKMRFWGDT 157
G + A+ LF++ L GF PD T+ V+ AC S D G + MR +
Sbjct: 491 GKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEH 550
Query: 158 YVQNTMMNFYFKCGNEEDGCKVFDKMR-GCSVVSWTTLIAGLIACGKVDRAREVFDEMPS 216
Y M++ + G D K+ ++M V WTTL+ A G ++R R + +
Sbjct: 551 Y--GCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILE 608
Query: 217 KNVVSWTAMI 226
+ TA++
Sbjct: 609 LDPTCATALV 618
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 198/410 (48%), Gaps = 9/410 (2%)
Query: 23 DSQQALVTLENCCNFKQL---KQVHGRIIR-SGLTHDQVLLRKLLQHSCAYGKMNYASLV 78
DS + L C L K++H I+R S L D + L+ +G + A
Sbjct: 329 DSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWA 388
Query: 79 FDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAF 138
F ++ D +WN ++ S L L +L + D T ++K CI
Sbjct: 389 FSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGI 448
Query: 139 DFGRAVHALAIKMRFWGD---TYVQNTMMNFYFKCGNEEDGCKVFDKM-RGCSVVSWTTL 194
+ VH ++K D + N +++ Y KCGN E K+F + ++VS+ +L
Sbjct: 449 GKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSL 508
Query: 195 IAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNE 254
++G + G D A+ +F EM + ++ +W+ M+ Y + P EA +F +Q +RPN
Sbjct: 509 LSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNT 568
Query: 255 FTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGI 314
T+++L+ C ++ SL L + H Y I+ G+ GT L+D+Y+KCGSL A+ VF
Sbjct: 569 VTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLKGT-LLDVYAKCGSLKHAYSVFQS 627
Query: 315 MTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEG 374
R+L + M+ VHG +EAL ++ M ++N+ PD V +L+AC H +++G
Sbjct: 628 DARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDG 687
Query: 375 ERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTN 424
+ + + +G+ P +E Y C V+L LD+ Y+ M + N
Sbjct: 688 LQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNAN 737
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 154/339 (45%), Gaps = 40/339 (11%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKM-NYASLVFDQINAPDSFTWNVMIRGCTL 99
K +H II++GL D ++ L+ +G + A FD I D +WN +I G +
Sbjct: 142 KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSE 201
Query: 100 SGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASN---AFDFGRAVHALAIKMRFWGD 156
+ A F ML + P+ T V+ C + + A GR +H+ ++ R W
Sbjct: 202 NNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQ-RSWLQ 260
Query: 157 T--YVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEM 214
T +V N++++FY + G +++ A +F M
Sbjct: 261 THVFVCNSLVSFYLRVG-------------------------------RIEEAASLFTRM 289
Query: 215 PSKNVVSWTAMIDGYVKCQRPVEAFDLFEGM-QIENVRPNEFTLVSLVSACTEMGSLKLG 273
SK++VSW +I GY +AF LF + +V P+ T++S++ C ++ L G
Sbjct: 290 GSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASG 349
Query: 274 KWIHDYAIKNGIEL-GPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGV 332
K IH Y +++ L +G ALI Y++ G A+ F +M+ +++ +WN ++ +
Sbjct: 350 KEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFAD 409
Query: 333 HGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDV 371
+ L+L + + D+VT + +L C+++ +
Sbjct: 410 SPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGI 448
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 164/374 (43%), Gaps = 46/374 (12%)
Query: 23 DSQQALVTLENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVF 79
D + L ++ C + L + +HG + + G + + +L +M+ +F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 80 DQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFA----PDKFTYPFVIKACIAS 135
Q+++ D WN+++ G ++S E + FK M FA P T+ V+ C+
Sbjct: 80 RQMDSLDPVVWNIVLTGLSVSCGRE-TMRFFKAM---HFADEPKPSSVTFAIVLPLCVR- 134
Query: 136 NAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLI 195
GD+Y +M ++ K G E+ D + G ++VS
Sbjct: 135 ------------------LGDSYNGKSMHSYIIKAGLEK------DTLVGNALVSMYAKF 170
Query: 196 AGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEF 255
G I A FD + K+VVSW A+I G+ + +AF F M E PN
Sbjct: 171 -GFI----FPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYA 225
Query: 256 TLVSLVSACTEMG---SLKLGKWIHDYAIKNG-IELGPFLGTALIDMYSKCGSLDDAWIV 311
T+ +++ C M + + G+ IH Y ++ ++ F+ +L+ Y + G +++A +
Sbjct: 226 TIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASL 285
Query: 312 FGIMTERNLATWNTMITSLGVHGLSEEALDLFKEM-EKANVVPDAVTFVGVLSACVHMHD 370
F M ++L +WN +I + +A LF + K +V PD+VT + +L C + D
Sbjct: 286 FTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTD 345
Query: 371 VEEGERYFSLMTEH 384
+ G+ S + H
Sbjct: 346 LASGKEIHSYILRH 359
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 36/258 (13%)
Query: 114 LLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNE 173
LL GF D + V+KAC + + GRA+H K+ + V +++N Y KC
Sbjct: 13 LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCR-- 70
Query: 174 EDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGY-VKC 232
++D +++F +M S + V W ++ G V C
Sbjct: 71 -----------------------------RMDDCQKMFRQMDSLDPVVWNIVLTGLSVSC 101
Query: 233 QRPVEAFDLFEGMQI-ENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFL 291
R E F+ M + +P+ T ++ C +G GK +H Y IK G+E +
Sbjct: 102 GR--ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLV 159
Query: 292 GTALIDMYSKCGSL-DDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKAN 350
G AL+ MY+K G + DA+ F + ++++ +WN +I + + +A F M K
Sbjct: 160 GNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEP 219
Query: 351 VVPDAVTFVGVLSACVHM 368
P+ T VL C M
Sbjct: 220 TEPNYATIANVLPVCASM 237
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 155/285 (54%), Gaps = 33/285 (11%)
Query: 117 GFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDG 176
G++ D + +++C + F G H LA+K F D Y+ ++++ Y G
Sbjct: 115 GWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSG----- 169
Query: 177 CKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPV 236
+V+ A +VF+EMP +NVVSWTAMI G+ + R
Sbjct: 170 --------------------------EVENAYKVFEEMPERNVVSWTAMISGFAQEWRVD 203
Query: 237 EAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALI 296
L+ M+ PN++T +L+SACT G+L G+ +H + G++ + +LI
Sbjct: 204 ICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLI 263
Query: 297 DMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFK-EMEKANVVPDA 355
MY KCG L DA+ +F + +++ +WN+MI HGL+ +A++LF+ M K+ PDA
Sbjct: 264 SMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDA 323
Query: 356 VTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVEL 400
+T++GVLS+C H V+EG ++F+LM EH G+ P L HY C+V+L
Sbjct: 324 ITYLGVLSSCRHAGLVKEGRKFFNLMAEH-GLKPELNHYSCLVDL 367
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 134/302 (44%), Gaps = 35/302 (11%)
Query: 36 NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIR 95
+F+ H ++ G D L L+ G++ A VF+++ + +W MI
Sbjct: 135 DFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMIS 194
Query: 96 GCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWG 155
G + L L+ +M P+ +T+ ++ AC S A GR+VH + M
Sbjct: 195 GFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKS 254
Query: 156 DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMP 215
++ N++++ Y KCG+ +D ++FD+ VVSW ++IAG G +A E+F+ M
Sbjct: 255 YLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMM 314
Query: 216 SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKW 275
K+ +P+ T + ++S+C G +K G+
Sbjct: 315 PKS------------------------------GTKPDAITYLGVLSSCRHAGLVKEGRK 344
Query: 276 IHDYAIKNGI--ELGPFLGTALIDMYSKCGSLDDAW-IVFGIMTERNLATWNTMITSLGV 332
+ ++G+ EL + + L+D+ + G L +A ++ + + N W +++ S V
Sbjct: 345 FFNLMAEHGLKPELNHY--SCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRV 402
Query: 333 HG 334
HG
Sbjct: 403 HG 404
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 1/159 (0%)
Query: 253 NEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVF 312
+ + L S V +C + G H A+K G +LG++L+ +Y G +++A+ VF
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 313 GIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVE 372
M ERN+ +W MI+ + L L+ +M K+ P+ TF +LSAC +
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 373 EGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVY 411
+G R T H G+ L ++ +Y +L + +
Sbjct: 239 QG-RSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAF 276
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 133/227 (58%), Gaps = 1/227 (0%)
Query: 194 LIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGM-QIENVRP 252
+I L+ G+ A++V +NV++W MI GYV+ + EA + M +++P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 253 NEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVF 312
N+F+ S ++AC +G L KW+H I +GIEL L +AL+D+Y+KCG + + VF
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 313 GIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVE 372
+ +++ WN MIT HGL+ EA+ +F EME +V PD++TF+G+L+ C H +E
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 373 EGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
EG+ YF LM+ + I P LEHY MV+L + E Y E+M +
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPI 330
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 127/355 (35%), Gaps = 80/355 (22%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEML-LKGFAPDKFTYPFV 128
G+ A V + + TWN+MI G + E AL K ML P+KF++
Sbjct: 112 GESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASS 171
Query: 129 IKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSV 188
+ AC + VH+L I + + + +++ Y KCG+ +VF ++ V
Sbjct: 172 LAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDV 231
Query: 189 VSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE 248
W +I G G A VF E M+ E
Sbjct: 232 SIWNAMITGFATHGLATEAIRVFSE-------------------------------MEAE 260
Query: 249 NVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDA 308
+V P+ T + L++ C S CG L++
Sbjct: 261 HVSPDSITFLGLLTTC-----------------------------------SHCGLLEEG 285
Query: 309 WIVFGIMTER-----NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLS 363
FG+M+ R L + M+ LG G +EA +L + M + PD V + +LS
Sbjct: 286 KEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMP---IEPDVVIWRSLLS 342
Query: 364 ACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMS 418
+ + E GE +++ YV + +Y+ + + E MS
Sbjct: 343 SSRTYKNPELGEIAIQNLSKAKS-----GDYVLLSNIYSSTKKWESAQKVRELMS 392
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 196/403 (48%), Gaps = 39/403 (9%)
Query: 28 LVTLENCCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA 84
+ +L +C + K K Q+HG ++ G+ + + L+ G +N +F +
Sbjct: 419 ISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPE 478
Query: 85 PDSFTWNVMIRGCTLS-GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRA 143
D +WN +I S S A+V F G ++ T+ V+ A + + + G+
Sbjct: 479 HDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQ 538
Query: 144 VHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGK 203
+H LA+K + +N ++ Y KCG E DGC+
Sbjct: 539 IHGLALKNNIADEATTENALIACYGKCG-EMDGCE------------------------- 572
Query: 204 VDRAREVFDEMPSK-NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVS 262
++F M + + V+W +MI GY+ + +A DL M R + F +++S
Sbjct: 573 -----KIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLS 627
Query: 263 ACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLAT 322
A + +L+ G +H +++ +E +G+AL+DMYSKCG LD A F M RN +
Sbjct: 628 AFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS 687
Query: 323 WNTMITSLGVHGLSEEALDLFKEME-KANVVPDAVTFVGVLSACVHMHDVEEGERYFSLM 381
WN+MI+ HG EEAL LF+ M+ PD VTFVGVLSAC H +EEG ++F M
Sbjct: 688 WNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESM 747
Query: 382 TEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTN 424
++ YG++P +EH+ CM ++ ELD++ E M MK N
Sbjct: 748 SDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKM--PMKPN 788
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 149/326 (45%), Gaps = 37/326 (11%)
Query: 44 HGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSP 103
H R+ ++ L D L L+ G A VFD++ + +W ++ G + +G
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 104 EHALVLFKEMLLKGFAPDKFTYPFVIKAC--IASNAFDFGRAVHALAIKMRFWGDTYVQN 161
+ ALV ++M+ +G +++ + V++AC I S FGR +H L K+ + D V N
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 162 TMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVS 221
+++ Y+KC G V A F ++ KN VS
Sbjct: 144 VLISMYWKC------------------------------IGSVGYALCAFGDIEVKNSVS 173
Query: 222 WTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGS--LKLGKWIHDY 279
W ++I Y + AF +F MQ + RP E+T SLV+ + ++L + I
Sbjct: 174 WNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCT 233
Query: 280 AIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEA 339
K+G+ F+G+ L+ ++K GSL A VF M RN T N ++ L EEA
Sbjct: 234 IQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEA 293
Query: 340 LDLFKEMEKA-NVVPDAVTFVGVLSA 364
LF +M +V P+ ++V +LS+
Sbjct: 294 TKLFMDMNSMIDVSPE--SYVILLSS 317
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 169/370 (45%), Gaps = 47/370 (12%)
Query: 22 FDSQQALVTLENCCN------FKQLKQVHGRIIRSGLTHDQVLLRKLLQ-HSCAYGKMNY 74
F +Q A V++ C +Q+HG + + D V+ L+ + G + Y
Sbjct: 99 FSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGY 158
Query: 75 ASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIA 134
A F I +S +WN +I + +G A +F M G P ++T+ ++ +
Sbjct: 159 ALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
Query: 135 SNAFDFGRAVHALAIKMRFWG---DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSW 191
D R + + ++ G D +V + +++ + K G+ KVF++M + V+
Sbjct: 219 LTEPDV-RLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTL 277
Query: 192 TTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVR 251
L+ GL+ R+ + E +K + +MID V
Sbjct: 278 NGLMVGLV--------RQKWGEEATKLFMDMNSMID----------------------VS 307
Query: 252 PNEFTLV----SLVSACTEMGSLKLGKWIHDYAIKNG-IELGPFLGTALIDMYSKCGSLD 306
P + ++ S E+G LK G+ +H + I G ++ +G L++MY+KCGS+
Sbjct: 308 PESYVILLSSFPEYSLAEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIA 366
Query: 307 DAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACV 366
DA VF MT+++ +WN+MIT L +G EA++ +K M + +++P + T + LS+C
Sbjct: 367 DARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCA 426
Query: 367 HMHDVEEGER 376
+ + G++
Sbjct: 427 SLKWAKLGQQ 436
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 147/328 (44%), Gaps = 35/328 (10%)
Query: 36 NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIR 95
+ + L+Q+ I +SGL D + L+ G ++YA VF+Q+ ++ T N ++
Sbjct: 223 DVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMV 282
Query: 96 GCTLSGSPEHALVLFKEM-LLKGFAPDKFTY---PFVIKACIASNAFDFGRAVHALAIKM 151
G E A LF +M + +P+ + F + GR VH I
Sbjct: 283 GLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVI-- 340
Query: 152 RFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVF 211
+++F GN L+ CG + AR VF
Sbjct: 341 --------TTGLVDFMVGIGN--------------------GLVNMYAKCGSIADARRVF 372
Query: 212 DEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLK 271
M K+ VSW +MI G + +EA + ++ M+ ++ P FTL+S +S+C + K
Sbjct: 373 YFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAK 432
Query: 272 LGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLG 331
LG+ IH ++K GI+L + AL+ +Y++ G L++ +F M E + +WN++I +L
Sbjct: 433 LGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALA 492
Query: 332 VHGLS-EEALDLFKEMEKANVVPDAVTF 358
S EA+ F ++A + +TF
Sbjct: 493 RSERSLPEAVVCFLNAQRAGQKLNRITF 520
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 85/176 (48%), Gaps = 4/176 (2%)
Query: 194 LIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPN 253
LI + G AR+VFDEMP +N VSW ++ GY + EA M E + N
Sbjct: 42 LINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSN 101
Query: 254 EFTLVSLVSACTEMGSLKL--GKWIHDYAIKNGIELGPFLGTALIDMYSKC-GSLDDAWI 310
++ VS++ AC E+GS+ + G+ IH K + + LI MY KC GS+ A
Sbjct: 102 QYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALC 161
Query: 311 VFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVG-VLSAC 365
FG + +N +WN++I+ G A +F M+ P TF V +AC
Sbjct: 162 AFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTAC 217
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 140/322 (43%), Gaps = 42/322 (13%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQI-NAPDSFTWNVMIRGCTL 99
KQ+HG +++ + + L+ G+M+ +F ++ D+ TWN MI G
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIH 596
Query: 100 SGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYV 159
+ AL L ML G D F Y V+ A + + G VHA +++ D V
Sbjct: 597 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 656
Query: 160 QNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNV 219
+ +++ Y KCG ++D A F+ MP +N
Sbjct: 657 GSALVDMYSKCG-------------------------------RLDYALRFFNTMPVRNS 685
Query: 220 VSWTAMIDGYVKCQRPVEAFDLFEGMQIE-NVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
SW +MI GY + + EA LFE M+++ P+ T V ++SAC+ G L+ G + H
Sbjct: 686 YSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEG-FKHF 744
Query: 279 YAIKNGIELGPFLG--TALIDMYSKCGSLDDAWIVFGIMTER-NLATWNTMITS-LGVHG 334
++ + L P + + + D+ + G LD M + N+ W T++ + +G
Sbjct: 745 ESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANG 804
Query: 335 ----LSEEALDLFKEMEKANVV 352
L ++A ++ ++E N V
Sbjct: 805 RKAELGKKAAEMLFQLEPENAV 826
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 258 VSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTE 317
+S V +C +G ++ H KN ++ +L LI+ Y + G A VF M
Sbjct: 7 LSFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 318 RNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDV 371
RN +W +++ +G +EAL ++M K + + FV VL AC + V
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 180/368 (48%), Gaps = 33/368 (8%)
Query: 35 CNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQIN-APDSFTWNVM 93
CN LKQVH ++++ GL H+ + ++ G ++ A VFD + + D +WN M
Sbjct: 219 CNL--LKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSM 276
Query: 94 IRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRF 153
I G + E A LF +M D +TY ++ AC FG+++H + IK
Sbjct: 277 IAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGL 336
Query: 154 WGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDE 213
T N +++ Y + G ++ A +F+
Sbjct: 337 EQVTSATNALISMYIQ-----------------------------FPTGTMEDALSLFES 367
Query: 214 MPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG 273
+ SK+++SW ++I G+ + +A F ++ ++ +++ +L+ +C+++ +L+LG
Sbjct: 368 LKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLG 427
Query: 274 KWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVF-GIMTERNLATWNTMITSLGV 332
+ IH A K+G F+ ++LI MYSKCG ++ A F I ++ + WN MI
Sbjct: 428 QQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQ 487
Query: 333 HGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILE 392
HGL + +LDLF +M NV D VTF +L+AC H ++EG +LM Y I P +E
Sbjct: 488 HGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRME 547
Query: 393 HYVCMVEL 400
HY V+L
Sbjct: 548 HYAAAVDL 555
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 175/421 (41%), Gaps = 74/421 (17%)
Query: 37 FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRG 96
F++L H I+ G D + ++L +G + YA+++FD++ DS +WN MI G
Sbjct: 16 FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG 75
Query: 97 CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGD 156
T G E A LF M G D +++ ++K + FD G VH L IK + +
Sbjct: 76 YTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECN 135
Query: 157 TYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPS 216
YV +++++ Y KC ED + F ++ + VSW LIAG + + A + M
Sbjct: 136 VYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEM 195
Query: 217 KNVVSW----------------------------------------TAMIDGYVKCQRPV 236
K V+ AMI Y C
Sbjct: 196 KAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVS 255
Query: 237 EAFDLFEG--------------------------------MQIENVRPNEFTLVSLVSAC 264
+A +F+G MQ V + +T L+SAC
Sbjct: 256 DAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSAC 315
Query: 265 TEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSK--CGSLDDAWIVFGIMTERNLAT 322
+ GK +H IK G+E ALI MY + G+++DA +F + ++L +
Sbjct: 316 SGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLIS 375
Query: 323 WNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMT 382
WN++IT GLSE+A+ F + + + D F +L +C + ++ G++ +L T
Sbjct: 376 WNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALAT 435
Query: 383 E 383
+
Sbjct: 436 K 436
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 135/331 (40%), Gaps = 70/331 (21%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAY--GKMNYASLVFDQINAPDSFTWNVMIRGCT 98
K +HG +I+ GL L+ + G M A +F+ + + D +WN +I G
Sbjct: 325 KSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFA 384
Query: 99 LSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTY 158
G E A+ F + D + + ++++C G+ +HALA K F + +
Sbjct: 385 QKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEF 444
Query: 159 VQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK- 217
V ++++ Y KCG + + R C F ++ SK
Sbjct: 445 VISSLIVMYSKCG-------IIESARKC------------------------FQQISSKH 473
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
+ V+W AMI GY + + DLF M +NV+ + T ++++AC+ G
Sbjct: 474 STVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTG--------- 524
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSE 337
I+ G+EL L+ V+ I + + + + LG GL
Sbjct: 525 --LIQEGLEL-----------------LNLMEPVYKI--QPRMEHYAAAVDLLGRAGLVN 563
Query: 338 EALDLFKEMEKANVVPDAV---TFVGVLSAC 365
+A +L + M + PD + TF+GV AC
Sbjct: 564 KAKELIESMP---LNPDPMVLKTFLGVCRAC 591
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 191/381 (50%), Gaps = 13/381 (3%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVI 129
G+++ A ++D + D MI G G + A ++F EM + T+ +I
Sbjct: 155 GRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVV----TWTTMI 210
Query: 130 KACIASNAFDFGRAVHALAIKMRFWGDTYVQ-NTMMNFYFKCGNEEDGCKVFDKMRGCSV 188
+N D R + + + T V +M+ Y G ED + F+ M V
Sbjct: 211 TGYRQNNRVDVARKLFEVMPE-----KTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPV 265
Query: 189 VSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE 248
++ +I G G++ +AR VFD M ++ +W MI Y + +EA DLF MQ +
Sbjct: 266 IACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQ 325
Query: 249 NVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDA 308
VRP+ +L+S++S C + SL+ G+ +H + ++ + ++ + L+ MY KCG L A
Sbjct: 326 GVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKA 385
Query: 309 WIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHM 368
+VF + +++ WN++I+ HGL EEAL +F EM + +P+ VT + +L+AC +
Sbjct: 386 KLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYA 445
Query: 369 HDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNVV 428
+EEG F M + ++P +EHY C V++ ++D+ E+M++ K + V
Sbjct: 446 GKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTI--KPDATVW 503
Query: 429 -ELLQESKLTSVDDIKEVINK 448
LL K S D+ EV K
Sbjct: 504 GALLGACKTHSRLDLAEVAAK 524
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 150/340 (44%), Gaps = 51/340 (15%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEM----------LLKGFA 119
GK+N A FD + +WN ++ G +G P+ A LF EM L+ G+
Sbjct: 31 GKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYI 90
Query: 120 PDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMM----NFYFKC----- 170
++ A N F+ + ++ G Y+Q M+ + +++
Sbjct: 91 KNRMIVE-------ARNVFELMPERNVVSWTAMVKG--YMQEGMVGEAESLFWRMPERNE 141
Query: 171 -------------GNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK 217
G + K++D M VV+ T +I GL G+VD AR +FDEM +
Sbjct: 142 VSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRER 201
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
NVV+WT MI GY + R A LFE M E + S++ T G ++ +
Sbjct: 202 NVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSMLLGYTLSGRIEDAEEFF 257
Query: 278 DYAIKNGIELGPFLG-TALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLS 336
+ + + P + A+I + + G + A VF +M +R+ ATW MI + G
Sbjct: 258 EV-----MPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFE 312
Query: 337 EEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
EALDLF +M+K V P + + +LS C + ++ G +
Sbjct: 313 LEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQ 352
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 112/222 (50%), Gaps = 14/222 (6%)
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N++++ YF G ++ ++FD+M +VVSW L++G I + AR VF+ MP +NVV
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD-Y 279
SWTAM+ GY++ EA LF M NE + + + G + + ++D
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMP----ERNEVSWTVMFGGLIDDGRIDKARKLYDMM 167
Query: 280 AIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEA 339
+K+ + T +I + G +D+A ++F M ERN+ TW TMIT + + A
Sbjct: 168 PVKDVVA-----STNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVA 222
Query: 340 LDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLM 381
LF+ M + V++ +L +E+ E +F +M
Sbjct: 223 RKLFEVMPEKT----EVSWTSMLLGYTLSGRIEDAEEFFEVM 260
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 133/347 (38%), Gaps = 71/347 (20%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+QVH ++R D + L+ G++ A LVFD+ ++ D WN +I G
Sbjct: 351 RQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASH 410
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G E AL +F EM G P+K T ++ AC +Y
Sbjct: 411 GLGEEALKIFHEMPSSGTMPNKVTLIAILTAC------------------------SY-- 444
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRG--C---SVVSWTTLIAGLIACGKVDRAREVFDEMP 215
G E+G ++F+ M C +V ++ + L G+VD+A E+ + M
Sbjct: 445 ---------AGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMT 495
Query: 216 SK-NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGK 274
K + W A++ G K ++ ++ EN N T V L S + K
Sbjct: 496 IKPDATVWGALL-GACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSI-----NASRSK 549
Query: 275 WIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHG 334
W ++ + T + + C +WI G M T G+
Sbjct: 550 WGDVAVVRKNMR------TNNVSKFPGC-----SWIEVGKKVH--------MFTRGGIKN 590
Query: 335 LSEEALDLFKEMEKANVVPDAVTFVGVLSACVH-MHDVEEGERYFSL 380
E+A+ L + ++ +A G C H +HDV+E E+ SL
Sbjct: 591 HPEQAMILMMLEKTDGLLREA----GYSPDCSHVLHDVDEEEKVDSL 633
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 184/382 (48%), Gaps = 34/382 (8%)
Query: 31 LENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS 87
+E C K + K+V+G ++ +G +Q ++ ++L G + A +FD+I +
Sbjct: 130 VEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNL 189
Query: 88 FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHAL 147
+++ +I G G+ A LFK M + + T+ +++A + G+ +H
Sbjct: 190 YSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVC 249
Query: 148 AIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRA 207
A+K+ +T+V +++ Y KCG+ ED A
Sbjct: 250 ALKLGVVDNTFVSCGLIDMYSKCGDIED-------------------------------A 278
Query: 208 REVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEM 267
R F+ MP K V+W +I GY EA L M+ V ++FTL ++ T++
Sbjct: 279 RCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKL 338
Query: 268 GSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMI 327
L+L K H I+NG E TAL+D YSK G +D A VF + +N+ +WN ++
Sbjct: 339 AKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALM 398
Query: 328 TSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGI 387
HG +A+ LF++M ANV P+ VTF+ VLSAC + E+G F M+E +GI
Sbjct: 399 GGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGI 458
Query: 388 SPILEHYVCMVELYTGDSELDE 409
P HY CM+EL D LDE
Sbjct: 459 KPRAMHYACMIELLGRDGLLDE 480
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 1/166 (0%)
Query: 212 DEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE-NVRPNEFTLVSLVSACTEMGSL 270
D SK+ V+ + I+ V C R EAF+LFE ++I + + T +LV AC + S+
Sbjct: 80 DTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSI 139
Query: 271 KLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSL 330
+ K ++ + + NG E ++ ++ M+ KCG + DA +F + ERNL ++ ++I+
Sbjct: 140 RCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGF 199
Query: 331 GVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
G EA +LFK M + + TF +L A + + G++
Sbjct: 200 VNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQ 245
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 167/351 (47%), Gaps = 35/351 (9%)
Query: 78 VFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASN- 136
VFDQ+ + +W MI GC + + E + LF+ M + P++ T V+ AC+ N
Sbjct: 207 VFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNY 266
Query: 137 AFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIA 196
+ +H + + D + M Y +CGN
Sbjct: 267 GSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGN------------------------ 302
Query: 197 GLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFT 256
V +R +F+ ++VV W++MI GY + E +L M+ E + N T
Sbjct: 303 -------VSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVT 355
Query: 257 LVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT 316
L+++VSACT L +H +K G LG ALIDMY+KCGSL A VF +T
Sbjct: 356 LLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELT 415
Query: 317 ERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
E++L +W++MI + G+HG EAL++FK M K D + F+ +LSAC H VEE +
Sbjct: 416 EKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQT 475
Query: 377 YFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNV 427
F+ Y + LEHY C + L ++D+ + E +++ MK + +
Sbjct: 476 IFT-QAGKYHMPVTLEHYACYINLLGRFGKIDDAF--EVTINMPMKPSARI 523
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 152/342 (44%), Gaps = 41/342 (11%)
Query: 35 CNFKQL-----KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFT 89
C F+Q Q+H +++G D V+ L+ + + VFD++ D+ +
Sbjct: 56 CAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVS 115
Query: 90 WNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIA-SNAFDFGRAVHALA 148
+ +I C G A+ L KEM GF P ++ C ++ R HAL
Sbjct: 116 YCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALV 175
Query: 149 -IKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRA 207
+ R + +++ Y K FD A
Sbjct: 176 LVDERMQESVLLSTALVDMYLK----------FDDHAA---------------------A 204
Query: 208 REVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEM 267
VFD+M KN VSWTAMI G V Q DLF MQ EN+RPN TL+S++ AC E+
Sbjct: 205 FHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVEL 264
Query: 268 --GSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNT 325
GS L K IH ++ ++G L A + MY +CG++ + ++F R++ W++
Sbjct: 265 NYGS-SLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSS 323
Query: 326 MITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVH 367
MI+ G E ++L +M K + ++VT + ++SAC +
Sbjct: 324 MISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTN 365
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 121/271 (44%), Gaps = 37/271 (13%)
Query: 104 EHALVLFKEMLLKGFAPDKFT--YPFVIKAC-IASNAFDFGRAVHALAIKMRFWGDTYVQ 160
+ AL L+K + + + FT P VIKAC F G +H L +K DT V
Sbjct: 27 DEALRLYK-LKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVS 85
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N++++ Y K F + R+VFDEM ++ V
Sbjct: 86 NSLISMYAK----------FSRKYA---------------------VRKVFDEMLHRDTV 114
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSL-KLGKWIHDY 279
S+ ++I+ + EA L + M P + SL++ CT MGS K+ + H
Sbjct: 115 SYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHAL 174
Query: 280 A-IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEE 338
+ ++ L TAL+DMY K A+ VF M +N +W MI+ + E
Sbjct: 175 VLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEM 234
Query: 339 ALDLFKEMEKANVVPDAVTFVGVLSACVHMH 369
+DLF+ M++ N+ P+ VT + VL ACV ++
Sbjct: 235 GVDLFRAMQRENLRPNRVTLLSVLPACVELN 265
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 123/296 (41%), Gaps = 32/296 (10%)
Query: 40 LKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTL 99
+K++HG R G D+ L + C G ++ + ++F+ D W+ MI G
Sbjct: 271 VKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAE 330
Query: 100 SGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYV 159
+G + L +M +G + T ++ AC S F VH+ +K F +
Sbjct: 331 TGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILL 390
Query: 160 QNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNV 219
N +++ Y KCG+ +VF ++ +VSW++
Sbjct: 391 GNALIDMYAKCGSLSAAREVFYELTEKDLVSWSS-------------------------- 424
Query: 220 VSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDY 279
MI+ Y EA ++F+GM ++ ++++SAC G ++ + I
Sbjct: 425 -----MINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQ 479
Query: 280 AIKNGIELGPFLGTALIDMYSKCGSLDDAW-IVFGIMTERNLATWNTMITSLGVHG 334
A K + + I++ + G +DDA+ + + + + W++++++ HG
Sbjct: 480 AGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHG 535
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Query: 226 IDGYVKCQRPVEAFDLFEGMQIENVRPNEFT--LVSLVSACT-EMGSLKLGKWIHDYAIK 282
+ G V Q EA L++ ++I ++ N FT L S++ AC + LG +H +K
Sbjct: 17 LKGLVSDQFYDEALRLYK-LKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLK 75
Query: 283 NGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDL 342
G + + +LI MY+K VF M R+ ++ ++I S GL EA+ L
Sbjct: 76 AGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKL 135
Query: 343 FKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYF 378
KEM +P + +L+ C M + R F
Sbjct: 136 IKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMF 171
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/347 (33%), Positives = 174/347 (50%), Gaps = 37/347 (10%)
Query: 68 AYGKMNY---ASL-VFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKG-FAPDK 122
AY K+N+ SL VF + + F+WN++I + SG ++ LF M + PD
Sbjct: 75 AYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDD 134
Query: 123 FTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDK 182
FT P +++AC AS G +H L +K+ F +V + ++ Y G
Sbjct: 135 FTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMG----------- 183
Query: 183 MRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLF 242
K+ AR++FD+MP ++ V +TAM GYV+ + +F
Sbjct: 184 --------------------KLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMF 223
Query: 243 EGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKC 302
M + +VSL+ AC ++G+LK GK +H + I+ LG LG A+ DMY KC
Sbjct: 224 REMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKC 283
Query: 303 GSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVL 362
LD A VF M+ R++ +W+++I G+ G + LF EM K + P+AVTF+GVL
Sbjct: 284 SILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVL 343
Query: 363 SACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDE 409
SAC H VE+ YF LM E Y I P L+HY + + + L+E
Sbjct: 344 SACAHGGLVEKSWLYFRLMQE-YNIVPELKHYASVADCMSRAGLLEE 389
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 180/360 (50%), Gaps = 30/360 (8%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
K +H I++ + + ++ G+ + A F+++ D+ +N + +G T
Sbjct: 421 KSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQI 480
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G A ++K M L G PD T +++ C + + G V+ IK F + +V
Sbjct: 481 GDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVA 540
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
+ ++N + KC +FDK CG F+ K+ V
Sbjct: 541 HALINMFTKCDALAAAIVLFDK------------------CG--------FE----KSTV 570
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
SW M++GY+ + EA F M++E +PN T V++V A E+ +L++G +H
Sbjct: 571 SWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSL 630
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEAL 340
I+ G +G +L+DMY+KCG ++ + F ++ + + +WNTM+++ HGL+ A+
Sbjct: 631 IQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAV 690
Query: 341 DLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVEL 400
LF M++ + PD+V+F+ VLSAC H VEEG+R F M E + I +EHY CMV+L
Sbjct: 691 SLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDL 750
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 165/360 (45%), Gaps = 51/360 (14%)
Query: 28 LVTLENCCNFKQLKQVHGRIIRSGLT-HDQVLLRKLLQHSCAYGKMNYASLVFDQINAPD 86
L+ L C NF+ L QVHG +I SGL H+Q L+ + + + + ++FD + P
Sbjct: 9 LLMLRECKNFRCLLQVHGSLIVSGLKPHNQ-----LINAYSLFQRQDLSRVIFDSVRDPG 63
Query: 87 SFTWNVMIRGCTLSGSPEHALVLFKEMLL-KGFAPDKFTYPFVIKACIASNAFDFGRAVH 145
WN MIRG T +G AL F M KG PDK+++ F +KAC S F G +H
Sbjct: 64 VVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIH 123
Query: 146 ALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVD 205
L +M D Y+ ++ Y CK D +VS
Sbjct: 124 DLIAEMGLESDVYIGTALVEMY---------CKARD------LVS--------------- 153
Query: 206 RAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACT 265
AR+VFD+M K+VV+W M+ G + A LF M+ V + +L +L+ A +
Sbjct: 154 -ARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVS 212
Query: 266 EMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNT 325
++ + + +H IK G + LIDMY C L A VF + ++ ++W T
Sbjct: 213 KLEKSDVCRCLHGLVIKKGFIFA--FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGT 270
Query: 326 MITSLGVHGLSEEALDLFKEMEKANVVPDAV---------TFVGVLSACVHMHD--VEEG 374
M+ + +G EE L+LF M +V + V +VG L + +HD V++G
Sbjct: 271 MMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQG 330
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 174/417 (41%), Gaps = 68/417 (16%)
Query: 36 NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIR 95
+FK+ ++H I GL D + L++ C + A VFD+++ D TWN M+
Sbjct: 115 DFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVS 174
Query: 96 GCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRF-- 153
G +G AL+LF +M D + +I A D R +H L IK F
Sbjct: 175 GLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF 234
Query: 154 ------------WGDTYVQ---------------NTMMNFYFKCGNEEDGCKVFDKMR-- 184
D Y TMM Y G E+ ++FD MR
Sbjct: 235 AFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNY 294
Query: 185 ------------------------GCSVVSW-------------TTLIAGLIACGKVDRA 207
G ++ + T+L++ CG+++ A
Sbjct: 295 DVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIA 354
Query: 208 REVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEM 267
++F + ++VVSW+AMI Y + + EA LF M +++PN TL S++ C +
Sbjct: 355 EQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGV 414
Query: 268 GSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMI 327
+ +LGK IH YAIK IE TA+I MY+KCG A F + ++ +N +
Sbjct: 415 AASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALA 474
Query: 328 TSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEH 384
G + +A D++K M+ V PD+ T VG+L C D G + + +H
Sbjct: 475 QGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKH 531
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 110/227 (48%), Gaps = 21/227 (9%)
Query: 203 KVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN-VRPNEFTLVSLV 261
+ D +R +FD + VV W +MI GY + EA F M E + P++++ +
Sbjct: 48 RQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFAL 107
Query: 262 SACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLA 321
AC K G IHD + G+E ++GTAL++MY K L A VF M +++
Sbjct: 108 KACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVV 167
Query: 322 TWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSA-----------CVHMHD 370
TWNTM++ L +G S AL LF +M V D V+ ++ A C+H
Sbjct: 168 TWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLV 227
Query: 371 VEEGERY-FSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEA 416
+++G + FS S +++ Y +LY +S +EV+ +E+
Sbjct: 228 IKKGFIFAFS--------SGLIDMYCNCADLYAAESVFEEVWRKDES 266
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 145/329 (44%), Gaps = 37/329 (11%)
Query: 28 LVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS 87
L T C ++ + V+G+II+ G + + L+ + A ++FD+ S
Sbjct: 509 LQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKS 568
Query: 88 -FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHA 146
+WN+M+ G L G E A+ F++M ++ F P+ T+ +++A +A G +VH+
Sbjct: 569 TVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHS 628
Query: 147 LAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDR 206
I+ F T V N++++ Y KCG E K F ++ +VSW T+++ A
Sbjct: 629 SLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAA------ 682
Query: 207 AREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTE 266
G C A LF MQ ++P+ + +S++SAC
Sbjct: 683 --------------------HGLASC-----AVSLFLSMQENELKPDSVSFLSVLSACRH 717
Query: 267 MGSLKLGKWI-HDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM-TERNLATWN 324
G ++ GK I + ++ IE ++D+ K G +A + M + ++ W
Sbjct: 718 AGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWG 777
Query: 325 TMITSLGVHG---LSEEALDLFKEMEKAN 350
++ S +H LS AL ++E N
Sbjct: 778 ALLNSSRMHCNLWLSNAALCQLVKLEPLN 806
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 178/374 (47%), Gaps = 40/374 (10%)
Query: 35 CNFKQL----KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQ----INAPD 86
C+F L KQ+H +++SGL + L+ G + YA+ VF Q +N+
Sbjct: 248 CSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSV 307
Query: 87 SFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHA 146
+ WN M+ G ++ E AL L ++ D +T +K CI G VH+
Sbjct: 308 A-VWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHS 366
Query: 147 LAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDR 206
L + + D V + +++ + GN +D
Sbjct: 367 LVVVSGYELDYIVGSILVDLHANVGNIQD------------------------------- 395
Query: 207 AREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTE 266
A ++F +P+K++++++ +I G VK AF LF + + ++F + +++ C+
Sbjct: 396 AHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSS 455
Query: 267 MGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTM 326
+ SL GK IH IK G E P TAL+DMY KCG +D+ ++F M ER++ +W +
Sbjct: 456 LASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGI 515
Query: 327 ITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYG 386
I G +G EEA F +M + P+ VTF+G+LSAC H +EE M YG
Sbjct: 516 IVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYG 575
Query: 387 ISPILEHYVCMVEL 400
+ P LEHY C+V+L
Sbjct: 576 LEPYLEHYYCVVDL 589
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 179/350 (51%), Gaps = 5/350 (1%)
Query: 37 FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRG 96
FK+ + + +I+ G++ + + ++ + ++ A VFD+++ + TW M+ G
Sbjct: 21 FKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSG 80
Query: 97 CTLSGSPEHALVLFKEML-LKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWG 155
T G P A+ L++ ML + A ++F Y V+KAC G V+ K G
Sbjct: 81 YTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRG 140
Query: 156 DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMP 215
D + N++++ Y K G + F ++ S SW TLI+G G +D A +F MP
Sbjct: 141 DVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMP 200
Query: 216 SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKW 275
NVVSW +I G+V P A + MQ E + + F L + AC+ G L +GK
Sbjct: 201 QPNVVSWNCLISGFVDKGSP-RALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQ 259
Query: 276 IHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVF---GIMTERNLATWNTMITSLGV 332
+H +K+G+E PF +ALIDMYS CGSL A VF + ++A WN+M++ +
Sbjct: 260 LHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLI 319
Query: 333 HGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMT 382
+ +E AL L ++ ++++ D+ T G L C++ ++ G + SL+
Sbjct: 320 NEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVV 369
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 140/318 (44%), Gaps = 38/318 (11%)
Query: 22 FDSQQALVTLENCCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLV 78
FDS L+ C N+ L+ QVH ++ SG D ++ L+ G + A +
Sbjct: 340 FDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKL 399
Query: 79 FDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAF 138
F ++ D ++ +IRGC SG A LF+E++ G D+F ++K C + +
Sbjct: 400 FHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASL 459
Query: 139 DFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGL 198
+G+ +H L IK + + +++ Y KCG ++G +FD M VVSWT +I G
Sbjct: 460 GWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGF 519
Query: 199 IACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLV 258
G+V+ EAF F M + PN+ T +
Sbjct: 520 GQNGRVE-------------------------------EAFRYFHKMINIGIEPNKVTFL 548
Query: 259 SLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLG--TALIDMYSKCGSLDDAWIVFGIMT 316
L+SAC G L+ + + +K+ L P+L ++D+ + G +A + M
Sbjct: 549 GLLSACRHSGLLEEARSTLE-TMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMP 607
Query: 317 -ERNLATWNTMITSLGVH 333
E + W +++T+ G H
Sbjct: 608 LEPDKTIWTSLLTACGTH 625
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 154/372 (41%), Gaps = 38/372 (10%)
Query: 44 HGRIIRSGLTHDQVL------LRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGC 97
+GR+I + + ++L L+ C G M+ A +F ++ P+ +WN +I G
Sbjct: 155 NGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGF 214
Query: 98 TLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDT 157
GSP AL M +G D F P +KAC G+ +H +K
Sbjct: 215 VDKGSP-RALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSP 273
Query: 158 YVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK 217
+ + +++ Y CG+ VF + + +
Sbjct: 274 FAISALIDMYSNCGSLIYAADVFHQEK----------------------------LAVNS 305
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
+V W +M+ G++ + A L + ++ + +TL + C +L+LG +H
Sbjct: 306 SVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVH 365
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSE 337
+ +G EL +G+ L+D+++ G++ DA +F + +++ ++ +I G +
Sbjct: 366 SLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNS 425
Query: 338 EALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSL-MTEHYGISPILEHYVC 396
A LF+E+ K + D +L C + + G++ L + + Y P+
Sbjct: 426 LAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTA--TA 483
Query: 397 MVELYTGDSELD 408
+V++Y E+D
Sbjct: 484 LVDMYVKCGEID 495
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 30/224 (13%)
Query: 129 IKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSV 188
++ C AF G ++ A IK + ++ N +++ Y D KVFD+M ++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 189 VSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE 248
V+WTT+++G + GK ++A E++ M + E
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRM------------------------------LDSE 101
Query: 249 NVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDA 308
NEF +++ AC +G ++LG +++ K + L +++DMY K G L +A
Sbjct: 102 EEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEA 161
Query: 309 WIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVV 352
F + + +WNT+I+ GL +EA+ LF M + NVV
Sbjct: 162 NSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVV 205
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 264 CTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATW 323
C ++ + K G+ I + IK GI F+ +I MY L DA VF M+ERN+ TW
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 324 NTMITSLGVHGLSEEALDLFKEM-EKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMT 382
TM++ G +A++L++ M + + + VL AC + D++ G L+
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLG----ILVY 130
Query: 383 EHYGISPILEHYVCM---VELYTGDSELDEVYTS 413
E G + V M V++Y + L E +S
Sbjct: 131 ERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSS 164
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 183/394 (46%), Gaps = 40/394 (10%)
Query: 36 NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIR 95
+F V+GR+ + +L+ ++ G + A VFD++ TWN MI
Sbjct: 9 DFPSAVAVYGRMRKKNYMSSNILINGYVRA----GDLVNARKVFDEMPDRKLTTWNAMIA 64
Query: 96 GCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWG 155
G E L LF+EM GF+PD++T V + G+ +H IK
Sbjct: 65 GLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLEL 124
Query: 156 DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMP 215
D V +++ + Y + G +DG V MP
Sbjct: 125 DLVVNSSLAHMYMRNGKLQDG-------------------------------EIVIRSMP 153
Query: 216 SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKW 275
+N+V+W +I G + P L++ M+I RPN+ T V+++S+C+++ G+
Sbjct: 154 VRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQ 213
Query: 276 IHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGL 335
IH AIK G + ++LI MYSKCG L DA F + + W++MI++ G HG
Sbjct: 214 IHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQ 273
Query: 336 SEEALDLFKEM-EKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHY 394
+EA++LF M E+ N+ + V F+ +L AC H ++G F +M E YG P L+HY
Sbjct: 274 GDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHY 333
Query: 395 VCMVELYTGDSELDEVYTSEEAMSLSMKTNQNVV 428
C+V+L LD+ EA+ SM ++V
Sbjct: 334 TCVVDLLGRAGCLDQA----EAIIRSMPIKTDIV 363
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 115/213 (53%)
Query: 164 MNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWT 223
M+ Y K G+ V+ +MR + +S LI G + G + AR+VFDEMP + + +W
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 224 AMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKN 283
AMI G ++ + E LF M P+E+TL S+ S + S+ +G+ IH Y IK
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 284 GIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLF 343
G+EL + ++L MY + G L D IV M RNL WNT+I +G E L L+
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 344 KEMEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
K M+ + P+ +TFV VLS+C + +G++
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQ 213
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 171/391 (43%), Gaps = 40/391 (10%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+Q+HG I+ GL D V+ L GK+ +V + + WN +I G +
Sbjct: 111 QQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQN 170
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G PE L L+K M + G P+K T+ V+ +C G+ +HA AIK+ V
Sbjct: 171 GCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVV 230
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
+++++ Y KCG D K F + V W+++I+ G+ D A E+F+ M +
Sbjct: 231 SSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQT-- 288
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
N+ NE ++L+ AC+ G G + D
Sbjct: 289 ----------------------------NMEINEVAFLNLLYACSHSGLKDKGLELFDMM 320
Query: 281 I-KNGIELGPFLGTALIDMYSKCGSLDDA-WIVFGIMTERNLATWNTMITSLGVHGLSEE 338
+ K G + G T ++D+ + G LD A I+ + + ++ W T++++ +H +E
Sbjct: 321 VEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEM 380
Query: 339 ALDLFKEMEKANVVPDA--VTFVGVLSACVHMHDVEEGERYF--SLMTEHYGISPILEHY 394
A +FKE+ + + A V V ++ DV E + + + GIS EH
Sbjct: 381 AQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGIS-WFEHK 439
Query: 395 VCMVELYTGD---SELDEVYTSEEAMSLSMK 422
+ + GD S+ E+Y+ + ++L MK
Sbjct: 440 GEVHQFKMGDRSQSKSKEIYSYLKELTLEMK 470
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 199/449 (44%), Gaps = 77/449 (17%)
Query: 31 LENCCNFKQLK---QVHGRII---RSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA 84
L+ C N L+ +H +I +S D + L+ + A +FD +
Sbjct: 38 LKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPE 97
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFA-PDKFTYPFVIKACIASNAFDFGRA 143
+ +W M++G SG L LFK M G + P++F V K+C S + G+
Sbjct: 98 RNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQ 157
Query: 144 VHALAIKMRFWGDTYVQNTM-------------------------------MNFYFKCGN 172
H +K +V+NT+ ++ Y +CG
Sbjct: 158 FHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGA 217
Query: 173 EEDGC----------------------KVFDKMR-----------------GCSVVSWTT 193
++G ++F +R V +
Sbjct: 218 FKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGA 277
Query: 194 LIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPN 253
LI CGKV A+ VFD+ ++N+ T ++D Y + + EA +LF M + V PN
Sbjct: 278 LINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPN 337
Query: 254 EFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFG 313
E+T L+++ E+ LK G +H +K+G +G AL++MY+K GS++DA F
Sbjct: 338 EYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFS 397
Query: 314 IMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEE 373
MT R++ TWNTMI+ HGL EAL+ F M +P+ +TF+GVL AC H+ VE+
Sbjct: 398 GMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQ 457
Query: 374 GERYFSLMTEHYGISPILEHYVCMVELYT 402
G YF+ + + + + P ++HY C+V L +
Sbjct: 458 GLHYFNQLMKKFDVQPDIQHYTCIVGLLS 486
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 120/278 (43%), Gaps = 37/278 (13%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSG 101
QVH R++R G + L+ GK+ YA VFD +A + F ++
Sbjct: 258 QVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDK 317
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQN 161
S E AL LF +M K P+++T+ ++ + + G +H L +K + V N
Sbjct: 318 SFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGN 377
Query: 162 TMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEM----PSK 217
++N Y K G+ ED K F M +V+W T+I+G G A E FD M
Sbjct: 378 ALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIP 437
Query: 218 NVVSWTAMID-----GYVK-----CQRPVEAFDLFEGMQ--------------------I 247
N +++ ++ G+V+ + ++ FD+ +Q
Sbjct: 438 NRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDF 497
Query: 248 ENVRPNEFTLV---SLVSACTEMGSLKLGKWIHDYAIK 282
P E+ +V +L++AC + +LGK + +YAI+
Sbjct: 498 MRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIE 535
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 184/393 (46%), Gaps = 34/393 (8%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+Q+HG + + G + L L++ + A VFD++ PD +WN ++ G S
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRF-WGDTYV 159
G + + LF E+ P++F++ + AC + G +H+ +K+ G+ V
Sbjct: 135 GRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVV 194
Query: 160 QNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIA----------------------- 196
N +++ Y KCG +D VF M VSW ++A
Sbjct: 195 GNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDT 254
Query: 197 --------GLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE 248
+ G + A +V +MP+ N SW ++ GYV ++ EA + F M
Sbjct: 255 VTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSS 314
Query: 249 NVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDA 308
VR +E++L +++A + + G IH A K G++ + +ALIDMYSKCG L A
Sbjct: 315 GVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHA 374
Query: 309 WIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVV-PDAVTFVGVLSACVH 367
++F M +NL WN MI+ +G S EA+ LF ++++ + PD TF+ +L+ C H
Sbjct: 375 ELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSH 434
Query: 368 MH-DVEEGERYFSLMTEHYGISPILEHYVCMVE 399
+E YF +M Y I P +EH ++
Sbjct: 435 CEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIR 467
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%)
Query: 251 RPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWI 310
+P+ LV L+ G + L + +H Y K+G L +L+ Y SL+DA
Sbjct: 52 KPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHK 111
Query: 311 VFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMH 369
VF M + ++ +WN++++ G +E + LF E+ +++V P+ +F L+AC +H
Sbjct: 112 VFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLH 170
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 162/346 (46%), Gaps = 35/346 (10%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVI 129
G+M+ A VFD++ D TW MI G T G E+AL L + M +G P+ T ++
Sbjct: 267 GRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLV 326
Query: 130 KACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV 189
C + + G+ +H A++ + + D ++ ++++ Y KC
Sbjct: 327 SVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCK------------------ 368
Query: 190 SWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN 249
+VD VF + W+A+I G V+ + +A LF+ M+ E+
Sbjct: 369 -------------RVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRED 415
Query: 250 VRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAW 309
V PN TL SL+ A + L+ IH Y K G T L+ +YSKCG+L+ A
Sbjct: 416 VEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAH 475
Query: 310 IVFGIMTER----NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSAC 365
+F + E+ ++ W +I+ G+HG AL +F EM ++ V P+ +TF L+AC
Sbjct: 476 KIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNAC 535
Query: 366 VHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVY 411
H VEEG F M EHY HY C+V+L LDE Y
Sbjct: 536 SHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAY 581
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 170/369 (46%), Gaps = 32/369 (8%)
Query: 43 VHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGS 102
VHGRI+RS D+ + LL +GK+ A VFD + D +WN MI G +G
Sbjct: 139 VHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGY 198
Query: 103 PEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNT 162
AL++F M+ + D T ++ C + GR VH L + R V+N
Sbjct: 199 MNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNA 258
Query: 163 MMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSW 222
++N Y KCG ++D AR VFD M ++V++W
Sbjct: 259 LVNMYLKCG-------------------------------RMDEARFVFDRMERRDVITW 287
Query: 223 TAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIK 282
T MI+GY + A +L MQ E VRPN T+ SLVS C + + GK +H +A++
Sbjct: 288 TCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVR 347
Query: 283 NGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDL 342
+ + T+LI MY+KC +D + VF ++ + W+ +I + L +AL L
Sbjct: 348 QQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGL 407
Query: 343 FKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYT 402
FK M + +V P+ T +L A + D+ + +T+ G L+ +V +Y+
Sbjct: 408 FKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTK-TGFMSSLDAATGLVHVYS 466
Query: 403 GDSELDEVY 411
L+ +
Sbjct: 467 KCGTLESAH 475
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 111/220 (50%), Gaps = 3/220 (1%)
Query: 192 TTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVR 251
+TL CG + AR++F+EMP +++S+ +I YV+ +A +F M E V+
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 252 --PNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAW 309
P+ +T + A E+ S+KLG +H +++ ++ AL+ MY G ++ A
Sbjct: 113 CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMAR 172
Query: 310 IVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMH 369
VF +M R++ +WNTMI+ +G +AL +F M +V D T V +L C H+
Sbjct: 173 DVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLK 232
Query: 370 DVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDE 409
D+E G L+ E + +E +V +Y +DE
Sbjct: 233 DLEMGRNVHKLVEEKR-LGDKIEVKNALVNMYLKCGRMDE 271
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 131/342 (38%), Gaps = 41/342 (11%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
K +HG +R + D ++ L+ +++ VF + + W+ +I GC +
Sbjct: 339 KCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQN 398
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
AL LFK M + P+ T ++ A A +H K F
Sbjct: 399 ELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAA 458
Query: 161 NTMMNFYFKCGNEEDGCKVF----DKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPS 216
+++ Y KCG E K+F +K + VV W LI+G G A +VF EM
Sbjct: 459 TGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVR 518
Query: 217 KNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWI 276
V PNE T S ++AC+ G ++ G +
Sbjct: 519 SGVT-------------------------------PNEITFTSALNACSHSGLVEEGLTL 547
Query: 277 HDYAIKNGIELGPFLG-TALIDMYSKCGSLDDAW-IVFGIMTERNLATWNTMITSLGVH- 333
+ +++ L T ++D+ + G LD+A+ ++ I E W ++ + H
Sbjct: 548 FRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHE 607
Query: 334 --GLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEE 373
L E A + E+E N + V + +A D+E+
Sbjct: 608 NVQLGEMAANKLFELEPEN-TGNYVLLANIYAALGRWKDMEK 648
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 179/372 (48%), Gaps = 35/372 (9%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSG 101
Q+HG ++ G + L+ G++N A VF +I +WN MI G +G
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 102 SPEHALVLFKEMLLKGFA--PDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFW--GDT 157
AL F M PD+FT ++KAC ++ G+ +H ++ F
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 158 YVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK 217
+ ++++ Y KCG + AR+ FD++ K
Sbjct: 248 TITGSLVDLYVKCGY-------------------------------LFSARKAFDQIKEK 276
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
++SW+++I GY + VEA LF+ +Q N + + F L S++ + L+ GK +
Sbjct: 277 TMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQ 336
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSE 337
A+K L + +++DMY KCG +D+A F M +++ +W +IT G HGL +
Sbjct: 337 ALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGK 396
Query: 338 EALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCM 397
+++ +F EM + N+ PD V ++ VLSAC H ++EGE FS + E +GI P +EHY C+
Sbjct: 397 KSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACV 456
Query: 398 VELYTGDSELDE 409
V+L L E
Sbjct: 457 VDLLGRAGRLKE 468
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 171/364 (46%), Gaps = 35/364 (9%)
Query: 23 DSQQALVTLENCCNFKQLK----QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLV 78
+ +Q LV++ C K L QVH +++SG + + L+ C + A V
Sbjct: 4 NQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKV 63
Query: 79 FDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAF 138
FD + + +W+ ++ G L+G + +L LF EM +G P++FT+ +KAC NA
Sbjct: 64 FDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNAL 123
Query: 139 DFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGL 198
+ G +H +K+ F V N++++ Y KCG + KVF ++ S++SW +IAG
Sbjct: 124 EKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGF 183
Query: 199 IACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLV 258
+ G +A + F M N+ RP+EFTL
Sbjct: 184 VHAGYGSKALDTFGMMQEANI-----------------------------KERPDEFTLT 214
Query: 259 SLVSACTEMGSLKLGKWIHDYAIKNGIEL--GPFLGTALIDMYSKCGSLDDAWIVFGIMT 316
SL+ AC+ G + GK IH + +++G + +L+D+Y KCG L A F +
Sbjct: 215 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK 274
Query: 317 ERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
E+ + +W+++I G EA+ LFK +++ N D+ ++ + +G++
Sbjct: 275 EKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQ 334
Query: 377 YFSL 380
+L
Sbjct: 335 MQAL 338
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 136/323 (42%), Gaps = 47/323 (14%)
Query: 41 KQVHGRIIRSGL--THDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCT 98
KQ+HG ++RSG + L+ G + A FDQI +W+ +I G
Sbjct: 230 KQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYA 289
Query: 99 LSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTY 158
G A+ LFK + D F +I G+ + ALA+K+ +T
Sbjct: 290 QEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETS 349
Query: 159 VQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKN 218
V N++++ Y KCG ++ K F +M+ V+SWT +I G G ++ +F EM
Sbjct: 350 VLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLR-- 407
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG----- 273
N+ P+E ++++SAC+ G +K G
Sbjct: 408 -----------------------------HNIEPDEVCYLAVLSACSHSGMIKEGEELFS 438
Query: 274 KWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM-TERNLATWNTMITSLGV 332
K + + IK +E ++D+ + G L +A + M + N+ W T+++ V
Sbjct: 439 KLLETHGIKPRVE----HYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRV 494
Query: 333 HGLSEEALDLFKEMEKANVVPDA 355
HG ++L KE+ K + DA
Sbjct: 495 HG----DIELGKEVGKILLRIDA 513
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 185/413 (44%), Gaps = 46/413 (11%)
Query: 14 HFNTPTTRFDSQQALVTLEN----CCNFKQL---------KQVHGRIIRSGLTHDQVLLR 60
HF+T F + + N C FK + KQ+H ++ G D +
Sbjct: 88 HFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGC 147
Query: 61 KLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAP 120
C + A +FD+I + TWN I G P A+ F E P
Sbjct: 148 SAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHP 207
Query: 121 DKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVF 180
+ T+ + AC + G +H L ++ F D V N +++FY KC
Sbjct: 208 NSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKC---------- 257
Query: 181 DKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFD 240
++R ++ F EM +KN VSW +++ YV+ +A
Sbjct: 258 KQIRSSEII---------------------FTEMGTKNAVSWCSLVAAYVQNHEDEKASV 296
Query: 241 LFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYS 300
L+ + + V ++F + S++SAC M L+LG+ IH +A+K +E F+G+AL+DMY
Sbjct: 297 LYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYG 356
Query: 301 KCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANV--VPDAVTF 358
KCG ++D+ F M E+NL T N++I G + AL LF+EM P+ +TF
Sbjct: 357 KCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTF 416
Query: 359 VGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVY 411
V +LSAC VE G + F M YGI P EHY C+V++ ++ Y
Sbjct: 417 VSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAY 469
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 149/338 (44%), Gaps = 36/338 (10%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNY---ASLVFDQINAPDSFTWNVMIRGC 97
+ VH RI+++ + L L + Y K+++ A LV A + +W +I G
Sbjct: 26 RVVHARIVKTLDSPPPPFLANYLIN--MYSKLDHPESARLVLRLTPARNVVSWTSLISGL 83
Query: 98 TLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDT 157
+G ALV F EM +G P+ FT+P KA + G+ +HALA+K D
Sbjct: 84 AQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDV 143
Query: 158 YVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK 217
+V GC FD + T L D AR++FDE+P +
Sbjct: 144 FV----------------GCSAFD------MYCKTRL---------RDDARKLFDEIPER 172
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
N+ +W A I V RP EA + F + + PN T + ++AC++ L LG +H
Sbjct: 173 NLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLH 232
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSE 337
+++G + + LID Y KC + + I+F M +N +W +++ + + E
Sbjct: 233 GLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDE 292
Query: 338 EALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGE 375
+A L+ K V VLSAC M +E G
Sbjct: 293 KASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGR 330
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 260 LVSACTEMGSLKLGKWIHDYAIKN-GIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER 318
L+ S++LG+ +H +K PFL LI+MYSK + A +V + R
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 319 NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYF 378
N+ +W ++I+ L +G AL F EM + VVP+ TF A + G++
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131
Query: 379 SLMTE 383
+L +
Sbjct: 132 ALAVK 136
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 162/328 (49%), Gaps = 36/328 (10%)
Query: 86 DSFTWNVMIRGCTLSGSPEHALVLFKEMLLKG-FAPDKFTYPFVIKACIASNAFDFGRAV 144
D +WN +I GC SG +L F+ M +G D T I A GR
Sbjct: 544 DLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCF 603
Query: 145 HALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKV 204
H LAIK DT +QNT++ Y +C + E KVF GLI+
Sbjct: 604 HGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVF----------------GLIS---- 643
Query: 205 DRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSAC 264
N+ SW +I + + E F LF +++E PNE T V L+SA
Sbjct: 644 -----------DPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSAS 689
Query: 265 TEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWN 324
T++GS G H + I+ G + PF+ AL+DMYS CG L+ VF +++ WN
Sbjct: 690 TQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWN 749
Query: 325 TMITSLGVHGLSEEALDLFKEM-EKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTE 383
++I++ G HG+ E+A++LFKE+ + + P+ +F+ +LSAC H ++EG Y+ M E
Sbjct: 750 SVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEE 809
Query: 384 HYGISPILEHYVCMVELYTGDSELDEVY 411
+G+ P+ EH V +V++ +L E Y
Sbjct: 810 KFGVKPVTEHRVWIVDMLGRAGKLREAY 837
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 158/334 (47%), Gaps = 37/334 (11%)
Query: 38 KQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGC 97
++ +H I +GL D L L+ ++ A VF + D +WN ++ C
Sbjct: 205 RKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKC 264
Query: 98 TLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDT 157
+G P +L FK M G D T+ VI AC + G ++H L IK + +
Sbjct: 265 LANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEA 324
Query: 158 YVQ--NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMP 215
+V N++++ Y KCG+ E A VF+E+
Sbjct: 325 HVSVGNSIISMYSKCGDTEA-------------------------------AETVFEELV 353
Query: 216 SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQ-IENVRPNEFTLVSLVSACTEMGSLKLGK 274
++V+S A+++G+ EAF + MQ ++ ++P+ T+VS+ S C ++ + G+
Sbjct: 354 CRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGR 413
Query: 275 WIHDYAIKNGIELGPF-LGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVH 333
+H Y ++ ++ + ++IDMY KCG A ++F T R+L +WN+MI++ +
Sbjct: 414 AVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQN 473
Query: 334 GLSEEALDLFKEM--EKANVVPDAVTFVGVLSAC 365
G + +A +LFKE+ E + T + +L++C
Sbjct: 474 GFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSC 507
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 143/338 (42%), Gaps = 34/338 (10%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+ VH ++ GL D KLL G++ +S +FD++ D WN MI +
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G A+ LF EM+ KG D T A + + +H LAI+ GD+ +
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N +MN Y K N VF M +VSW T++ +A G
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANG------------------ 268
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
P ++ F+ M + T ++SAC+ + L LG+ +H
Sbjct: 269 -------------HPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLV 315
Query: 281 IKNGI--ELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEE 338
IK+G E +G ++I MYSKCG + A VF + R++ + N ++ +G+ EE
Sbjct: 316 IKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEE 375
Query: 339 ALDLFKEMEKAN-VVPDAVTFVGVLSACVHMHDVEEGE 375
A + +M+ + + PD T V + S C + EG
Sbjct: 376 AFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGR 413
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 192/462 (41%), Gaps = 71/462 (15%)
Query: 7 NPDANVPHFNTPT---TRFDSQQALVTLENCCNFKQL---KQVHGRIIRSGLTHDQ--VL 58
+P ++ +F + T D+ + C + ++L + +HG +I+SG + + +
Sbjct: 269 HPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSV 328
Query: 59 LRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEML-LKG 117
++ G A VF+++ D + N ++ G +G E A + +M +
Sbjct: 329 GNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDK 388
Query: 118 FAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTY-VQNTMMNFYFKCGNEEDG 176
PD T + C + GRAVH ++M V N++++ Y KCG
Sbjct: 389 IQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA 448
Query: 177 CKVFDKMRGCSVVSWTTLIAGLIACGKVDRAR----EVFDEMP----------------- 215
+F +VSW ++I+ G +A+ EV E
Sbjct: 449 ELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCD 508
Query: 216 ---------------------------------SKNVVSWTAMIDGYVKCQRPVEAFDLF 242
++++ SW ++I G +E+ F
Sbjct: 509 SSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAF 568
Query: 243 EGMQIEN-VRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSK 301
+ M E +R + TL+ +SA +G + G+ H AIK+ EL L LI MY +
Sbjct: 569 QAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGR 628
Query: 302 CGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGV 361
C ++ A VFG++++ NL +WN +I++L + E LF+ ++ + P+ +TFVG+
Sbjct: 629 CKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGL 685
Query: 362 LSACVHMHDVEEG-ERYFSLMTEHYGISPILEHYVCMVELYT 402
LSA + G + + L+ + +P + +V++Y+
Sbjct: 686 LSASTQLGSTSYGMQAHCHLIRRGFQANPFVS--AALVDMYS 725
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 142/334 (42%), Gaps = 47/334 (14%)
Query: 39 QLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGK---MNYASLVFDQINAPDSFTWNVMIR 95
Q + HG I+S D L L+ YG+ + A VF I+ P+ +WN +I
Sbjct: 599 QGRCFHGLAIKSLRELDTQLQNTLIT---MYGRCKDIESAVKVFGLISDPNLCSWNCVIS 655
Query: 96 GCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWG 155
+ + + LF+ + L+ P++ T+ ++ A + +G H I+ F
Sbjct: 656 ALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQA 712
Query: 156 DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMP 215
+ +V +++ Y CG E G KVF S+ +W ++I+ G ++A E+F E+
Sbjct: 713 NPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELS 772
Query: 216 SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG-K 274
S + + PN+ + +SL+SAC+ G + G
Sbjct: 773 SNS------------------------------EMEPNKSSFISLLSACSHSGFIDEGLS 802
Query: 275 WIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAW-IVFGIMTERNLATWNTMITSLGVH 333
+ K G++ ++DM + G L +A+ + GI + W ++++ H
Sbjct: 803 YYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYH 862
Query: 334 G---LSEEALDLFKEMEKANV---VPDAVTFVGV 361
G L +E ++ EME N + A T+VG+
Sbjct: 863 GDTKLGKEVAEVLFEMEPDNASYYISLANTYVGL 896
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 130/283 (45%), Gaps = 48/283 (16%)
Query: 142 RAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIAC 201
R+VH A+K D + ++ FY + G +VS + L
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGE---------------LVSSSCL------- 144
Query: 202 GKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENV-RPNEFTLVSL 260
FDE+ K+V+ W +MI + R + A LF IE + + NEF +L
Sbjct: 145 ---------FDELKEKDVIVWNSMITALNQNGRYIAAVGLF----IEMIHKGNEFDSTTL 191
Query: 261 VSACTEMGSLKLGK---WIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTE 317
+ A + + SL L + +H AI+ G+ L AL+++Y+K +L A VF M
Sbjct: 192 LLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEH 251
Query: 318 RNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERY 377
R++ +WNT++T +G ++L FK M + D VTF V+SAC + ++ GE
Sbjct: 252 RDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESL 311
Query: 378 FSLMTEHYGISPILEHYV----CMVELYT--GDSELDEVYTSE 414
L+ + G SP E +V ++ +Y+ GD+E E E
Sbjct: 312 HGLVIKS-GYSP--EAHVSVGNSIISMYSKCGDTEAAETVFEE 351
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 188/383 (49%), Gaps = 36/383 (9%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSG 101
QVHG I++G ++ + ++ A VF+ + D TWN MI +
Sbjct: 309 QVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAK 368
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQN 161
+ A+ ++K M + G PD+FT+ ++ + D V A IK + N
Sbjct: 369 LGKSAMSVYKRMHIIGVKPDEFTFGSLLATSL---DLDVLEMVQACIIKFGLSSKIEISN 425
Query: 162 TMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVS 221
+++ Y K G E +F++ +++SW +I+G G P + +
Sbjct: 426 ALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNG-----------FPFEGLER 474
Query: 222 WTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAI 281
++ +++ V+ + P+ +TL +L+S C SL LG H Y +
Sbjct: 475 FSCLLESEVR------------------ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVL 516
Query: 282 KNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALD 341
++G +G ALI+MYS+CG++ ++ VF M+E+++ +WN++I++ HG E A++
Sbjct: 517 RHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVN 576
Query: 342 LFKEME-KANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVEL 400
+K M+ + V+PDA TF VLSAC H VEEG F+ M E +G+ ++H+ C+V+L
Sbjct: 577 TYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDL 636
Query: 401 YTGDSELDEVYTSEEAMSLSMKT 423
LDE +E + +S KT
Sbjct: 637 LGRAGHLDE---AESLVKISEKT 656
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 161/349 (46%), Gaps = 39/349 (11%)
Query: 62 LLQHSCAYGKMNYASLVFDQINAPDSFT-WNVMIRGCTLSGSPEHALVLFKEMLLKGFAP 120
LL S G + YA VFD++ D WN MI GC SG E ++ LF+EM G
Sbjct: 129 LLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRH 188
Query: 121 DKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVF 180
DKF + ++ C + DFG+ VH+L IK F+ + V N ++ YF C D C VF
Sbjct: 189 DKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVF 247
Query: 181 DKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFD 240
++ ++ ++ V++ +IDG +R E+
Sbjct: 248 EET-----------------------------DVAVRDQVTFNVVIDGLAGFKRD-ESLL 277
Query: 241 LFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYS 300
+F M ++RP + T VS++ +C+ +G +H AIK G E + A + MYS
Sbjct: 278 VFRKMLEASLRPTDLTFVSVMGSCS---CAAMGHQVHGLAIKTGYEKYTLVSNATMTMYS 334
Query: 301 KCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVG 360
A VF + E++L TWNTMI+S L + A+ ++K M V PD TF
Sbjct: 335 SFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGS 394
Query: 361 VLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDE 409
+L+ + + +E +G+S +E ++ Y+ + ++++
Sbjct: 395 LLATSLDLDVLE----MVQACIIKFGLSSKIEISNALISAYSKNGQIEK 439
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 157/313 (50%), Gaps = 16/313 (5%)
Query: 83 NAPDSFTWNVMIRGCTLSGSPEHALVLFKEM-LLKGFAPDKFTYPFVIKACIASNAFDFG 141
N+ N + G T SG +AL LF ++ PD+++ I FG
Sbjct: 17 NSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFG 76
Query: 142 RAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIAC 201
VH AI+ ++V NT+++ Y + GN K FD++ V SWTTL++
Sbjct: 77 GQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKL 136
Query: 202 GKVDRAREVFDEMPSKNVVS-WTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSL 260
G ++ A EVFD+MP ++ V+ W AMI G + + +LF M VR ++F ++
Sbjct: 137 GDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATI 196
Query: 261 VSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVF--GIMTER 318
+S C + GSL GK +H IK G + + ALI MY C + DA +VF + R
Sbjct: 197 LSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVR 255
Query: 319 NLATWNTMITSLGVHGLS-EEALDLFKEMEKANVVPDAVTFVGVLSAC--------VHMH 369
+ T+N +I G+ G +E+L +F++M +A++ P +TFV V+ +C VH
Sbjct: 256 DQVTFNVVID--GLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGL 313
Query: 370 DVEEGERYFSLMT 382
++ G ++L++
Sbjct: 314 AIKTGYEKYTLVS 326
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 139/319 (43%), Gaps = 41/319 (12%)
Query: 40 LKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTL 99
L+ V II+ GL+ + L+ G++ A L+F++ + +WN +I G
Sbjct: 405 LEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYH 464
Query: 100 SGSPEHALVLFKEMLLK--GFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDT 157
+G P L F +L PD +T ++ C+++++ G HA ++ + +T
Sbjct: 465 NGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKET 524
Query: 158 YVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK 217
+ N ++N Y +CG ++ +VF++M VVSW +LI+ G+ + A + M +
Sbjct: 525 LIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDE 584
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
V P+ T +++SAC+ G ++ G I
Sbjct: 585 G------------------------------KVIPDAATFSAVLSACSHAGLVEEGLEIF 614
Query: 278 DYAIK-NGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLAT----WNTMITSLGV 332
+ ++ +G+ + L+D+ + G LD+A + I +E+ + + W + ++
Sbjct: 615 NSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKI-SEKTIGSRVDVWWALFSACAA 673
Query: 333 HG---LSEEALDLFKEMEK 348
HG L + L E EK
Sbjct: 674 HGDLKLGKMVAKLLMEKEK 692
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 202/413 (48%), Gaps = 23/413 (5%)
Query: 24 SQQALVTLENCC----NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVF 79
S A+ ++ C N K +H + +++GL + L+ G + A F
Sbjct: 103 SSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAF 162
Query: 80 DQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFD 139
D I ++ +WN ++ G SG + A +F ++ K D ++ +I + + D
Sbjct: 163 DDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEK----DAVSWNLIISS--YAKKGD 216
Query: 140 FGRA---VHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIA 196
G A A+ +K N ++ Y C + FD M + VSW T+I+
Sbjct: 217 MGNACSLFSAMPLK-----SPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMIS 271
Query: 197 GLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN--VRPNE 254
G G V A E+F M K+ + + AMI Y + +P +A LF M N ++P+E
Sbjct: 272 GYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDE 331
Query: 255 FTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGI 314
TL S+VSA +++G+ G W+ Y ++GI++ L T+LID+Y K G A+ +F
Sbjct: 332 ITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSN 391
Query: 315 MTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEG 374
+ +++ +++ MI G++G++ EA LF M + + P+ VTF G+LSA H V+EG
Sbjct: 392 LNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEG 451
Query: 375 ERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNV 427
+ F+ M +H + P +HY MV++ L+E Y E S+ M+ N V
Sbjct: 452 YKCFNSMKDH-NLEPSADHYGIMVDMLGRAGRLEEAY--ELIKSMPMQPNAGV 501
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 172/361 (47%), Gaps = 17/361 (4%)
Query: 31 LENCCNFKQLKQVHGRIIRSGLTH-DQVLLRKLLQHSCAYGK--MNYASLVFDQINAPDS 87
L+ C +Q KQVH +++ + H + +L+ + L + + + + Y + N DS
Sbjct: 10 LQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDS 69
Query: 88 FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHAL 147
F+W ++R + + + ++ +M G P V++AC G+ +HA
Sbjct: 70 FSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQ 129
Query: 148 AIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRA 207
A+K G YVQ ++ Y + G E K FD + + VSW +L+ G + G++D A
Sbjct: 130 ALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEA 189
Query: 208 REVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFT-LVSLVSACTE 266
R VFD++P K+ VSW +I Y K A LF M +++ P + L+ C E
Sbjct: 190 RRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKS--PASWNILIGGYVNCRE 247
Query: 267 MGSLKLGKWIHD-YAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNT 325
M KL + D KNG+ +I Y+K G + A +F +M++++ ++
Sbjct: 248 M---KLARTYFDAMPQKNGVSW-----ITMISGYTKLGDVQSAEELFRLMSKKDKLVYDA 299
Query: 326 MITSLGVHGLSEEALDLFKEMEKAN--VVPDAVTFVGVLSACVHMHDVEEGERYFSLMTE 383
MI +G ++AL LF +M + N + PD +T V+SA + + G S +TE
Sbjct: 300 MIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITE 359
Query: 384 H 384
H
Sbjct: 360 H 360
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 175/384 (45%), Gaps = 33/384 (8%)
Query: 27 ALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPD 86
+L+++ +C N KQVHG ++SGL D + L G + + +F I D
Sbjct: 458 SLLSVLDCLNLG--KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKD 515
Query: 87 SFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHA 146
+ W MI G G A+ LF EML G +PD+ T V+ C + + G+ +H
Sbjct: 516 NACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHG 575
Query: 147 LAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDR 206
++ + + ++N Y KCG+ + +V+D+
Sbjct: 576 YTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDR------------------------ 611
Query: 207 AREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTE 266
+P + VS +++I GY + + F LF M + + F + S++ A
Sbjct: 612 -------LPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAAL 664
Query: 267 MGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTM 326
LG +H Y K G+ P +G++L+ MYSK GS+DD F + +L W +
Sbjct: 665 SDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTAL 724
Query: 327 ITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYG 386
I S HG + EAL ++ M++ PD VTFVGVLSAC H VEE + + M + YG
Sbjct: 725 IASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYG 784
Query: 387 ISPILEHYVCMVELYTGDSELDEV 410
I P HYVCMV+ L E
Sbjct: 785 IEPENRHYVCMVDALGRSGRLREA 808
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 175/383 (45%), Gaps = 38/383 (9%)
Query: 23 DSQQALVTLENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVF 79
DS L C + ++L K V R+I+ G D + ++ G M A VF
Sbjct: 250 DSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVF 308
Query: 80 DQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFD 139
+I P +W VM+ G T S AL +FKEM G + T VI AC +
Sbjct: 309 SRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVC 368
Query: 140 FGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLI 199
VHA K F+ D+ V +++ Y K G+ + +VF+ +
Sbjct: 369 EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL---------------- 412
Query: 200 ACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVS 259
D++ +N+V+ MI + + ++P +A LF M E +R +EF++ S
Sbjct: 413 ------------DDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCS 458
Query: 260 LVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERN 319
L+S + L LGK +H Y +K+G+ L +G++L +YSKCGSL++++ +F + ++
Sbjct: 459 LLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKD 515
Query: 320 LATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFS 379
A W +MI+ +G EA+ LF EM PD T VL+ C + G+
Sbjct: 516 NACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHG 575
Query: 380 LMTEHYGISPILEHYVCMVELYT 402
T GI ++ +V +Y+
Sbjct: 576 -YTLRAGIDKGMDLGSALVNMYS 597
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 151/332 (45%), Gaps = 33/332 (9%)
Query: 35 CNFKQLKQVHGRIIRSGL-THDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVM 93
CN + K + ++R L D L + LL G M A+ +FD I PD + N+M
Sbjct: 62 CNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIM 121
Query: 94 IRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRF 153
I G E +L F +M GF ++ +Y VI AC A A F V IKM +
Sbjct: 122 ISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGY 181
Query: 154 WGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDE 213
+ V++ +++ + K ED A +VF +
Sbjct: 182 FFYEVVESALIDVFSKNLRFED-------------------------------AYKVFRD 210
Query: 214 MPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG 273
S NV W +I G ++ Q FDLF M + +P+ +T S+++AC + L+ G
Sbjct: 211 SLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFG 270
Query: 274 KWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVH 333
K + IK G E F+ TA++D+Y+KCG + +A VF + ++ +W M++
Sbjct: 271 KVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKS 329
Query: 334 GLSEEALDLFKEMEKANVVPDAVTFVGVLSAC 365
+ AL++FKEM + V + T V+SAC
Sbjct: 330 NDAFSALEIFKEMRHSGVEINNCTVTSVISAC 361
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 123/287 (42%), Gaps = 33/287 (11%)
Query: 78 VFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNA 137
VF + + + WN +I G + + LF EM + PD +TY V+ AC +
Sbjct: 207 VFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEK 266
Query: 138 FDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAG 197
FG+ V A IK CG E+ V T ++
Sbjct: 267 LRFGKVVQARVIK-------------------CGAED-------------VFVCTAIVDL 294
Query: 198 LIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTL 257
CG + A EVF +P+ +VVSWT M+ GY K A ++F+ M+ V N T+
Sbjct: 295 YAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTV 354
Query: 258 VSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTE 317
S++SAC + +H + K+G L + ALI MYSK G +D + VF + +
Sbjct: 355 TSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDD 414
Query: 318 -RNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLS 363
+ N MITS +A+ LF M + + D + +LS
Sbjct: 415 IQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLS 461
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 6/196 (3%)
Query: 180 FDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAF 239
FD S++SW + G + A ++FD +P +VVS MI GY + + E+
Sbjct: 82 FDVFLTKSLLSWYS------NSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESL 135
Query: 240 DLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMY 299
F M NE + S++SAC+ + + + + + IK G + +ALID++
Sbjct: 136 RFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVF 195
Query: 300 SKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFV 359
SK +DA+ VF N+ WNT+I + DLF EM PD+ T+
Sbjct: 196 SKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYS 255
Query: 360 GVLSACVHMHDVEEGE 375
VL+AC + + G+
Sbjct: 256 SVLAACASLEKLRFGK 271
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 95/255 (37%), Positives = 140/255 (54%), Gaps = 2/255 (0%)
Query: 156 DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMP 215
DT NTM++ Y ED +F +M SW +++G + G V+ AR F++ P
Sbjct: 311 DTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTP 370
Query: 216 SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKW 275
K+ VSW ++I Y K + EA DLF M IE +P+ TL SL+SA T + +L+LG
Sbjct: 371 EKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQ 430
Query: 276 IHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT-ERNLATWNTMITSLGVHG 334
+H +K I P + ALI MYS+CG + ++ +F M +R + TWN MI HG
Sbjct: 431 MHQIVVKTVIPDVP-VHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHG 489
Query: 335 LSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHY 394
+ EAL+LF M+ + P +TFV VL+AC H V+E + F M Y I P +EHY
Sbjct: 490 NASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHY 549
Query: 395 VCMVELYTGDSELDE 409
+V + +G + +E
Sbjct: 550 SSLVNVTSGQGQFEE 564
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 137/379 (36%), Gaps = 98/379 (25%)
Query: 61 KLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAP 120
K L G + A +F+++ A ++ TWN MI G A LF M P
Sbjct: 45 KELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM------P 98
Query: 121 DKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGN---EEDGC 177
+ D NTM++ Y CG E+
Sbjct: 99 KR---------------------------------DVVTWNTMISGYVSCGGIRFLEEAR 125
Query: 178 KVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVE 237
K+FD+M SW T+I+G ++ A +F++MP +N VSW+AMI G+ +
Sbjct: 126 KLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDS 185
Query: 238 AFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKW---------------------- 275
A LF M +++ P L +LV+ + L W
Sbjct: 186 AVVLFRKMPVKDSSP----LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTL 241
Query: 276 IHDYAIKNGIELGPFL--------------------------GTALIDMYSKCGSLDDAW 309
I Y + +E L ++I Y K G + A
Sbjct: 242 IVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSAR 301
Query: 310 IVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMH 369
++F M +R+ +WNTMI E+A LF EM DA ++ ++S +
Sbjct: 302 LLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNR----DAHSWNMMVSGYASVG 357
Query: 370 DVEEGERYFSLMTEHYGIS 388
+VE YF E + +S
Sbjct: 358 NVELARHYFEKTPEKHTVS 376
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 42/205 (20%)
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N +N + G + +F+K+ + V+W T+I+G + ++++AR++FD MP ++VV
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 221 SWTAMIDGYVKC---QRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
+W MI GYV C + EA LF+ EM S W
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFD----------------------EMPSRDSFSW-- 139
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSE 337
+I Y+K + +A ++F M ERN +W+ MIT +G +
Sbjct: 140 ---------------NTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVD 184
Query: 338 EALDLFKEMEKANVVPDAVTFVGVL 362
A+ LF++M + P G++
Sbjct: 185 SAVVLFRKMPVKDSSPLCALVAGLI 209
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 119/291 (40%), Gaps = 40/291 (13%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVI 129
G + A F++ + +WN +I + + A+ LF M ++G PD T ++
Sbjct: 357 GNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLL 416
Query: 130 KACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMR-GCSV 188
A G +H + +K D V N ++ Y +CG + ++FD+M+ V
Sbjct: 417 SASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREV 475
Query: 189 VSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE 248
++W +I G G EA +LF M+
Sbjct: 476 ITWNAMIGGYAFHGNAS-------------------------------EALNLFGSMKSN 504
Query: 249 NVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLG--TALIDMYSKCGSLD 306
+ P+ T VS+++AC G + K ++ + ++ P + ++L+++ S G +
Sbjct: 505 GIYPSHITFVSVLNACAHAGLVDEAK-AQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFE 563
Query: 307 DA-WIVFGIMTERNLATWNTMITSLGVH---GLSEEALDLFKEMEKANVVP 353
+A +I+ + E + W ++ + ++ GL+ A + +E + P
Sbjct: 564 EAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTP 614
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 180/344 (52%), Gaps = 11/344 (3%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVI 129
G+++ A +FD++ + +WN M++ G + A+ LF+ M + D ++ ++
Sbjct: 154 GRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMV 209
Query: 130 KACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV 189
+ D R + + + N M+ Y + ++ ++F M
Sbjct: 210 DGLAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNNRIDEADQLFQVMPERDFA 265
Query: 190 SWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE- 248
SW T+I G I ++++A +FD MP KNV+SWT MI GYV+ + EA ++F M +
Sbjct: 266 SWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDG 325
Query: 249 NVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDA 308
+V+PN T VS++SAC+++ L G+ IH K+ + + +AL++MYSK G L A
Sbjct: 326 SVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAA 385
Query: 309 WIVF--GIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACV 366
+F G++ +R+L +WN+MI HG +EA++++ +M K P AVT++ +L AC
Sbjct: 386 RKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACS 445
Query: 367 HMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEV 410
H VE+G +F + + EHY C+V+L L +V
Sbjct: 446 HAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDV 489
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 142/337 (42%), Gaps = 50/337 (14%)
Query: 62 LLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPD 121
L+ C GK+ A +FD + D TW +I G G A LF + +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRK---- 107
Query: 122 KFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFD 181
+ M++ Y + +F
Sbjct: 108 ----------------------------------NVVTWTAMVSGYLRSKQLSIAEMLFQ 133
Query: 182 KMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDL 241
+M +VVSW T+I G G++D+A E+FDEMP +N+VSW +M+ V+ R EA +L
Sbjct: 134 EMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNL 193
Query: 242 FEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSK 301
FE M +V + ++V + G + + + D + I A+I Y++
Sbjct: 194 FERMPRRDV----VSWTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWNAMITGYAQ 245
Query: 302 CGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGV 361
+D+A +F +M ER+ A+WNTMIT + +A LF M + NV +++ +
Sbjct: 246 NNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNV----ISWTTM 301
Query: 362 LSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMV 398
++ V + EE FS M + P + YV ++
Sbjct: 302 ITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSIL 338
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 16/216 (7%)
Query: 194 LIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPN 253
LI L GK+ AR++FD +P ++VV+WT +I GY+K EA +LF+ + + R N
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV---DSRKN 108
Query: 254 EFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFG 313
T ++VS L + + + + E +ID Y++ G +D A +F
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEML----FQEMPERNVVSWNTMIDGYAQSGRIDKALELFD 164
Query: 314 IMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEE 373
M ERN+ +WN+M+ +L G +EA++LF+ M + D V++ ++ V+E
Sbjct: 165 EMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDE 220
Query: 374 GERYFSLMTEHYGISPILEHYVCMVELYTGDSELDE 409
R F M E IS + M+ Y ++ +DE
Sbjct: 221 ARRLFDCMPERNIIS-----WNAMITGYAQNNRIDE 251
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 178/352 (50%), Gaps = 11/352 (3%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVI 129
G+++ A +++ I D+ MI G G + A +F EM + T+ ++
Sbjct: 155 GRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV----ITWTTMV 210
Query: 130 KACIASNAFDFGRAVHALAIKMRFWGDTYVQ-NTMMNFYFKCGNEEDGCKVFDKMRGCSV 188
+N D R + + + T V +M+ Y + G ED ++F+ M V
Sbjct: 211 TGYGQNNRVDDARKIFDVMPE-----KTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPV 265
Query: 189 VSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE 248
++ +I+GL G++ +AR VFD M +N SW +I + + +EA DLF MQ +
Sbjct: 266 IACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQ 325
Query: 249 NVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDA 308
VRP TL+S++S C + SL GK +H ++ ++ ++ + L+ MY KCG L +
Sbjct: 326 GVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKS 385
Query: 309 WIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEME-KANVVPDAVTFVGVLSACVH 367
++F +++ WN++I+ HGL EEAL +F EM + P+ VTFV LSAC +
Sbjct: 386 KLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSY 445
Query: 368 MHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
VEEG + + M +G+ PI HY CMV++ +E ++M++
Sbjct: 446 AGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTV 497
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 160/364 (43%), Gaps = 58/364 (15%)
Query: 56 QVLLRKL-------------LQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGS 102
Q+LLR+ + H GK++ A +FD ++ +WN M+ G +
Sbjct: 4 QILLRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLM 63
Query: 103 PEHALVLFKEMLLKGFAPDK--FTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDT--- 157
P A LF EM PD+ ++ ++ + + D R V L + T
Sbjct: 64 PRDARKLFDEM------PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALV 117
Query: 158 --YVQN----------------------TMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTT 193
YV N M+ + + G +D CK+++ + ++ T+
Sbjct: 118 KGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTS 177
Query: 194 LIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPN 253
+I GL G+VD ARE+FDEM ++V++WT M+ GY + R +A +F+ M
Sbjct: 178 MIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP------- 230
Query: 254 EFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLG-TALIDMYSKCGSLDDAWIVF 312
E T VS S MG ++ G+ + + + P + A+I + G + A VF
Sbjct: 231 EKTEVSWTSML--MGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVF 288
Query: 313 GIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVE 372
M ERN A+W T+I +G EALDLF M+K V P T + +LS C + +
Sbjct: 289 DSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLH 348
Query: 373 EGER 376
G++
Sbjct: 349 HGKQ 352
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N+M+ YF D K+FD+M +++SW L++G + G++D AR+VFD MP +NVV
Sbjct: 52 NSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV 111
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
SWTA++ GYV + A LF M +N L+ + + KL + I D
Sbjct: 112 SWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPD-- 169
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEAL 340
K+ I T++I K G +D+A +F M+ER++ TW TM+T G + ++A
Sbjct: 170 -KDNIAR-----TSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDAR 223
Query: 341 DLFKEMEKANVVPDA--VTFVGVLSACVHMHDVEEGERYFSLM 381
+F +V+P+ V++ +L V +E+ E F +M
Sbjct: 224 KIF------DVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM 260
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 136/367 (37%), Gaps = 87/367 (23%)
Query: 31 LENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS 87
L C + L KQVH +++R D + L+ G++ + L+FD+ + D
Sbjct: 338 LSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDI 397
Query: 88 FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFA-PDKFTYPFVIKACIASNAFDFGRAVHA 146
WN +I G G E AL +F EM L G P++ T+ + AC
Sbjct: 398 IMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSAC-------------- 443
Query: 147 LAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDR 206
+Y G E+G K+++ M
Sbjct: 444 ----------SY-----------AGMVEEGLKIYESMES--------------------- 461
Query: 207 AREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTE 266
VF P + M+D + R EA ++ + M +E P+ SL+ AC
Sbjct: 462 ---VFGVKPI--TAHYACMVDMLGRAGRFNEAMEMIDSMTVE---PDAAVWGSLLGACRT 513
Query: 267 MGSLKLGKWIHDYAIKNGIELGP-FLGTALI--DMYSKCGSLDDAWIVFGIMTERNL--- 320
L + ++ K IE+ P GT ++ +MY+ G D + +M R +
Sbjct: 514 HSQLDVA----EFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKS 569
Query: 321 --ATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFV----GVLSACVH-MHDVEE 373
+W + VH + ++ E E + D + + G C + +HDV+E
Sbjct: 570 PGCSWTEVENK--VHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDE 627
Query: 374 GERYFSL 380
E+ SL
Sbjct: 628 EEKVNSL 634
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 184/383 (48%), Gaps = 39/383 (10%)
Query: 67 CAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEML--LKGFAPDKFT 124
C YG + A +F ++ + +W MI G + AL+LF EM + +P+ T
Sbjct: 242 CRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGET 301
Query: 125 YPFVIKAC-----------------IASNAFDF----GRAVHALAIKMRFWG-------- 155
+ AC + SN ++ GR +L G
Sbjct: 302 LISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSL 361
Query: 156 -----DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGC-SVVSWTTLIAGLIACGKVDRARE 209
D N ++N Y K G+ E +F++++ VSWT++I G + G V RA
Sbjct: 362 LNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFG 421
Query: 210 VFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGS 269
+F ++ K+ V+WT MI G V+ + EA L M ++P T L+S+ +
Sbjct: 422 LFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSN 481
Query: 270 LKLGKWIHDYAIKNGIELGP--FLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMI 327
L GK IH K P L +L+ MY+KCG+++DA+ +F M +++ +WN+MI
Sbjct: 482 LDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMI 541
Query: 328 TSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGI 387
L HGL+++AL+LFKEM + P++VTF+GVLSAC H + G F M E Y I
Sbjct: 542 MGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSI 601
Query: 388 SPILEHYVCMVELYTGDSELDEV 410
P ++HY+ M++L +L E
Sbjct: 602 QPGIDHYISMIDLLGRAGKLKEA 624
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 140/323 (43%), Gaps = 58/323 (17%)
Query: 49 RSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFT----WNVMIRGCTLSGSPE 104
R G ++++ L+ + L G + +A + D+I S W ++ +G +
Sbjct: 39 RRGFSNEEALILRRLSE----GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLD 94
Query: 105 HALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMM 164
A VLF+ M + +K + A+ R + + W M+
Sbjct: 95 EARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVS---W------TVML 145
Query: 165 NFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTA 224
G ED ++FD+M +VVSW TL+ GLI G +++A++VFD MPS++VVSW A
Sbjct: 146 TALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNA 205
Query: 225 MIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNG 284
MI GY++ EA LF M +NV W
Sbjct: 206 MIKGYIENDGMEEAKLLFGDMSEKNVVT----------------------W--------- 234
Query: 285 IELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFK 344
T+++ Y + G + +A+ +F M ERN+ +W MI+ + L EAL LF
Sbjct: 235 --------TSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFL 286
Query: 345 EMEK--ANVVPDAVTFVGVLSAC 365
EM+K V P+ T + + AC
Sbjct: 287 EMKKDVDAVSPNGETLISLAYAC 309
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 150/327 (45%), Gaps = 25/327 (7%)
Query: 71 KMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDK--FTYPFV 128
+MN A +F ++ + +W VM+ G E A+ LF EM P++ ++ +
Sbjct: 123 RMNEAWTLFREM-PKNVVSWTVMLTALCDDGRSEDAVELFDEM------PERNVVSWNTL 175
Query: 129 IKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSV 188
+ I + + + V A+ R D N M+ Y + E+ +F M +V
Sbjct: 176 VTGLIRNGDMEKAKQVFD-AMPSR---DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNV 231
Query: 189 VSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQ-- 246
V+WT+++ G G V A +F EMP +N+VSWTAMI G+ + EA LF M+
Sbjct: 232 VTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKD 291
Query: 247 IENVRPNEFTLVSLVSACTEMGS--LKLGKWIHDYAIKNGIEL---GPFLGTALIDMYSK 301
++ V PN TL+SL AC +G +LG+ +H I NG E L +L+ MY+
Sbjct: 292 VDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYAS 351
Query: 302 CGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGV 361
G + A + +L + N +I +G E A LF E+ + D V++ +
Sbjct: 352 SGLIASAQSLLN--ESFDLQSCNIIINRYLKNGDLERAETLF---ERVKSLHDKVSWTSM 406
Query: 362 LSACVHMHDVEEGERYFSLMTEHYGIS 388
+ + DV F + + G++
Sbjct: 407 IDGYLEAGDVSRAFGLFQKLHDKDGVT 433
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 42/294 (14%)
Query: 22 FDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQ 81
FD Q + + L++ R HD+V ++ G ++ A +F +
Sbjct: 366 FDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQK 425
Query: 82 INAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFG 141
++ D TW VMI G + A L +M+ G P TY ++ + A++ D G
Sbjct: 426 LHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQG 485
Query: 142 RAVHALAIKMR--FWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLI 199
+ +H + K + D +QN++++ Y KCG ED ++F KM VSW ++I GL
Sbjct: 486 KHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLS 545
Query: 200 ACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVS 259
G D+A +F EM +PN T +
Sbjct: 546 HHGLADKALNLFKEMLD-------------------------------SGKKPNSVTFLG 574
Query: 260 LVSACTEMG----SLKLGKWIHD-YAIKNGIELGPFLGTALIDMYSKCGSLDDA 308
++SAC+ G L+L K + + Y+I+ GI+ ++ID+ + G L +A
Sbjct: 575 VLSACSHSGLITRGLELFKAMKETYSIQPGID----HYISMIDLLGRAGKLKEA 624
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 34/119 (28%)
Query: 293 TALIDMYSKCGSLDDAWIVFGIMTERNLAT------------------------------ 322
T+L+ Y+K G LD+A ++F +M ERN+ T
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVS 140
Query: 323 WNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLM 381
W M+T+L G SE+A++LF EM + NV V++ +++ + D+E+ ++ F M
Sbjct: 141 WTVMLTALCDDGRSEDAVELFDEMPERNV----VSWNTLVTGLIRNGDMEKAKQVFDAM 195
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 177/376 (47%), Gaps = 36/376 (9%)
Query: 30 TLENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPD 86
TL+ C + L KQVH ++ GL D L+ G + A VF +
Sbjct: 535 TLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWS 594
Query: 87 SFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHA 146
+ N +I G + + E A+VLF+EML +G P + T+ +++AC + G H
Sbjct: 595 VVSMNALIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHG 653
Query: 147 LAIKMRFWGD-TYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVD 205
K F + Y+ +++ Y + C +F ++
Sbjct: 654 QITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELS--------------------- 692
Query: 206 RAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACT 265
K++V WT M+ G+ + EA ++ M+ + V P++ T V+++ C+
Sbjct: 693 ---------SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCS 743
Query: 266 EMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER-NLATWN 324
+ SL+ G+ IH +L LIDMY+KCG + + VF M R N+ +WN
Sbjct: 744 VLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWN 803
Query: 325 TMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEH 384
++I +G +E+AL +F M +++++PD +TF+GVL+AC H V +G + F +M
Sbjct: 804 SLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQ 863
Query: 385 YGISPILEHYVCMVEL 400
YGI ++H CMV+L
Sbjct: 864 YGIEARVDHVACMVDL 879
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 173/378 (45%), Gaps = 36/378 (9%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
K VH + + G+ + L ++ +++YA FD + D WN M+ +
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSI 138
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G P L F + P+KFT+ V+ C +FGR +H IKM ++Y
Sbjct: 139 GKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCG 198
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGL---------------------- 198
+++ Y KC D +VF+ + + V WT L +G
Sbjct: 199 GALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHR 258
Query: 199 -------------IACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGM 245
I GK+ AR +F EM S +VV+W MI G+ K A + F M
Sbjct: 259 PDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNM 318
Query: 246 QIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSL 305
+ +V+ TL S++SA + +L LG +H AIK G+ ++G++L+ MYSKC +
Sbjct: 319 RKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKM 378
Query: 306 DDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSAC 365
+ A VF + E+N WN MI +G S + ++LF +M+ + D TF +LS C
Sbjct: 379 EAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTC 438
Query: 366 VHMHDVEEGERYFSLMTE 383
HD+E G ++ S++ +
Sbjct: 439 AASHDLEMGSQFHSIIIK 456
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 177/386 (45%), Gaps = 40/386 (10%)
Query: 11 NVPHFNTPTTRFDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYG 70
N+ + +TR L + N VH I+ GL + + L+
Sbjct: 317 NMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCE 376
Query: 71 KMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIK 130
KM A+ VF+ + + WN MIRG +G + LF +M G+ D FT+ ++
Sbjct: 377 KMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLS 436
Query: 131 ACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVS 190
C AS+ + G H++ IK + + +V N +++ Y KCG ED ++F++M
Sbjct: 437 TCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM------- 489
Query: 191 WTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENV 250
DR + V+W +I YV+ + EAFDLF+ M + +
Sbjct: 490 -------------CDR-----------DNVTWNTIIGSYVQDENESEAFDLFKRMNLCGI 525
Query: 251 RPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWI 310
+ L S + ACT + L GK +H ++K G++ G++LIDMYSKCG + DA
Sbjct: 526 VSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARK 585
Query: 311 VFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHD 370
VF + E ++ + N +I + L EEA+ LF+EM V P +TF ++ AC
Sbjct: 586 VFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPES 644
Query: 371 VEEG--------ERYFSLMTEHYGIS 388
+ G +R FS E+ GIS
Sbjct: 645 LTLGTQFHGQITKRGFSSEGEYLGIS 670
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 179/416 (43%), Gaps = 47/416 (11%)
Query: 29 VTLENCC---NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAP 85
+ L C N + +Q+H +I+ GL + L+ +++ A VF+ I P
Sbjct: 165 IVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDP 224
Query: 86 DSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVH 145
++ W + G +G PE A+++F+ M +G PD + VI I R
Sbjct: 225 NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDAR--- 281
Query: 146 ALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIA------GLI 199
L D N M++ + K G E + F MR SV S + + G++
Sbjct: 282 -LLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIV 340
Query: 200 A---------------------------------CGKVDRAREVFDEMPSKNVVSWTAMI 226
A C K++ A +VF+ + KN V W AMI
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMI 400
Query: 227 DGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIE 286
GY + +LF M+ ++FT SL+S C L++G H IK +
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLA 460
Query: 287 LGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEM 346
F+G AL+DMY+KCG+L+DA +F M +R+ TWNT+I S EA DLFK M
Sbjct: 461 KNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Query: 347 EKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYT 402
+V D L AC H+H + +G++ L + G+ L ++++Y+
Sbjct: 521 NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK-CGLDRDLHTGSSLIDMYS 575
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 269 SLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMIT 328
+L++GK +H ++ GI+ LG A++D+Y+KC + A F + E+++ WN+M++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 329 SLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
G + L F + + + P+ TF VLS C +VE G +
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQ 181
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 186/382 (48%), Gaps = 37/382 (9%)
Query: 21 RFDSQQALVTLENCCNFKQLKQVHGRIIRSGL-THDQVLLRKLLQHSCAYGKMNYASLVF 79
RF + AL + + K K++H +RS + T D +++ +L YG+++YA +F
Sbjct: 231 RFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIF 290
Query: 80 DQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLK-GFAPDKFTYPFVIKACIASNAF 138
+ + + WNVMI +G A + F++M + G PD T ++ A +A
Sbjct: 291 NGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAI 346
Query: 139 DFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGL 198
GR +H A++ F ++ +++ Y +CG + +FD+M +V+SW ++IA
Sbjct: 347 LEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAY 406
Query: 199 IACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLV 258
+ GK A E+F E+ ++V P+ T+
Sbjct: 407 VQNGKNYSALELFQELWDSSLV-------------------------------PDSTTIA 435
Query: 259 SLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER 318
S++ A E SL G+ IH Y +K+ + +L+ MY+ CG L+DA F + +
Sbjct: 436 SILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLK 495
Query: 319 NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYF 378
++ +WN++I + VHG ++ LF EM + V P+ TF +L+AC V+EG YF
Sbjct: 496 DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYF 555
Query: 379 SLMTEHYGISPILEHYVCMVEL 400
M YGI P +EHY CM++L
Sbjct: 556 ESMKREYGIDPGIEHYGCMLDL 577
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 157/295 (53%), Gaps = 33/295 (11%)
Query: 72 MNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKA 131
M A +FD++N D+F WNVMI+G T G A+ + M+ G D FTYPFVIK+
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 132 CIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSW 191
++ + G+ +HA+ IK+ F D YV N++++ Y K G D KVF++M +VSW
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 192 TTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVR 251
++I+G +A G + +F EM +KC +
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEM---------------LKC----------------GFK 228
Query: 252 PNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFL-GTALIDMYSKCGSLDDAWI 310
P+ F+ +S + AC+ + S K+GK IH +A+++ IE G + T+++DMYSK G + A
Sbjct: 229 PDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAER 288
Query: 311 VFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKAN-VVPDAVTFVGVLSA 364
+F M +RN+ WN MI +G +A F++M + N + PD +T + +L A
Sbjct: 289 IFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA 343
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 90/184 (48%)
Query: 192 TTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVR 251
T + G ++ A ++FDEM + W MI G+ C +EA + M V+
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127
Query: 252 PNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIV 311
+ FT ++ + + SL+ GK IH IK G ++ +LI +Y K G DA V
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKV 187
Query: 312 FGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDV 371
F M ER++ +WN+MI+ G +L LFKEM K PD + + L AC H++
Sbjct: 188 FEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSP 247
Query: 372 EEGE 375
+ G+
Sbjct: 248 KMGK 251
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 186/375 (49%), Gaps = 44/375 (11%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA----PDSFTWNVMIRGC 97
Q+HG +++SGL+ ++ L+ Y K + L FD A P +
Sbjct: 36 QLHGYVVKSGLSLIPLVANNLINF---YSK---SQLPFDSRRAFEDSPQKSSTTWSSIIS 89
Query: 98 TLSGS--PEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWG 155
+ + P +L K+M+ PD P K+C + D GR+VH L++K +
Sbjct: 90 CFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDA 149
Query: 156 DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMP 215
D +V +++++ Y KCG ++ AR++FDEMP
Sbjct: 150 DVFVGSSLVDMYAKCG-------------------------------EIVYARKMFDEMP 178
Query: 216 SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKW 275
+NVV+W+ M+ GY + EA LF+ EN+ N+++ S++S C L+LG+
Sbjct: 179 QRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQ 238
Query: 276 IHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGL 335
IH +IK+ + F+G++L+ +YSKCG + A+ VF + +NL WN M+ + H
Sbjct: 239 IHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSH 298
Query: 336 SEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYV 395
+++ ++LFK M+ + + P+ +TF+ VL+AC H V+EG YF M E I P +HY
Sbjct: 299 TQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESR-IEPTDKHYA 357
Query: 396 CMVELYTGDSELDEV 410
+V++ L E
Sbjct: 358 SLVDMLGRAGRLQEA 372
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 153/329 (46%), Gaps = 42/329 (12%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+ VH +++G D + L+ G++ YA +FD++ + TW+ M+ G
Sbjct: 136 RSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQM 195
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G E AL LFKE L + A + +++ VI C S + GR +H L+IK F ++V
Sbjct: 196 GENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVG 255
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
+++++ Y KCG E A +VF+E+P KN+
Sbjct: 256 SSLVSLYSKCGVPEG-------------------------------AYQVFNEVPVKNLG 284
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
W AM+ Y + + +LF+ M++ ++PN T +++++AC+ G + G++ D
Sbjct: 285 IWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM 344
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAW-IVFGIMTERNLATWNTMITSLGVHGLSEEA 339
++ IE +L+DM + G L +A ++ + + + W ++TS VH
Sbjct: 345 KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVH------ 398
Query: 340 LDLFKEMEKANVVPDAVTFVGVLSACVHM 368
K E A D V +G +S+ +H+
Sbjct: 399 ----KNTELAAFAADKVFELGPVSSGMHI 423
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 181/386 (46%), Gaps = 33/386 (8%)
Query: 28 LVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS 87
+ +++C + + + +H ++++S + +L+ G A +FD++ D
Sbjct: 38 IAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDL 97
Query: 88 FTWNVMIRGCTLSGSPEHALVLFKEMLLK--GFAPDKFTYPFVIKACIASNAFDFGRAVH 145
+WN +I G + G + M++ GF P++ T+ +I AC+ + + GR +H
Sbjct: 98 VSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIH 157
Query: 146 ALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVD 205
L +K + V N +N+Y K G+ CK+F+
Sbjct: 158 GLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFE------------------------ 193
Query: 206 RAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACT 265
++ KN+VSW MI +++ + F + P++ T ++++ +C
Sbjct: 194 -------DLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCE 246
Query: 266 EMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNT 325
+MG ++L + IH + G + TAL+D+YSK G L+D+ VF +T + W
Sbjct: 247 DMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTA 306
Query: 326 MITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHY 385
M+ + HG +A+ F+ M + PD VTF +L+AC H VEEG+ YF M++ Y
Sbjct: 307 MLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRY 366
Query: 386 GISPILEHYVCMVELYTGDSELDEVY 411
I P L+HY CMV+L L + Y
Sbjct: 367 RIDPRLDHYSCMVDLLGRSGLLQDAY 392
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 247 IENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLD 306
+ ++ N +L++ V +C S++L + +H +K+ F+G L+ Y + G
Sbjct: 27 VHSLDANVSSLIAAVKSCV---SIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDV 83
Query: 307 DAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANV--VPDAVTFVGVLSA 364
A +F M ER+L +WN++I+ G + ++ M + V P+ VTF+ ++SA
Sbjct: 84 CAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISA 143
Query: 365 CVHMHDVEEGE 375
CV+ EEG
Sbjct: 144 CVYGGSKEEGR 154
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 170/373 (45%), Gaps = 33/373 (8%)
Query: 38 KQLKQVHGRIIRSGLTHDQVLL-RKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRG 96
K+ ++ HG + GL V + L+ +GK A LV D++ D +I G
Sbjct: 182 KEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVG 241
Query: 97 CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGD 156
+ G A+ F+ ML++ P+++TY V+ +C G+ +H L +K F
Sbjct: 242 YSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESA 301
Query: 157 TYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPS 216
Q +++ Y +C VD + VF +
Sbjct: 302 LASQTSLLTMYLRCS-------------------------------LVDDSLRVFKCIEY 330
Query: 217 KNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWI 276
N VSWT++I G V+ R A F M ++++PN FTL S + C+ + + G+ I
Sbjct: 331 PNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQI 390
Query: 277 HDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLS 336
H K G + + G+ LID+Y KCG D A +VF ++E ++ + NTMI S +G
Sbjct: 391 HGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFG 450
Query: 337 EEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVC 396
EALDLF+ M + P+ VT + VL AC + VEEG F + I +HY C
Sbjct: 451 REALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYAC 509
Query: 397 MVELYTGDSELDE 409
MV+L L+E
Sbjct: 510 MVDLLGRAGRLEE 522
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 138/312 (44%), Gaps = 34/312 (10%)
Query: 31 LENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS 87
L +C N K + K +HG +++SG LL ++ + VF I P+
Sbjct: 274 LISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQ 333
Query: 88 FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHAL 147
+W +I G +G E AL+ F++M+ P+ FT ++ C F+ GR +H +
Sbjct: 334 VSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGI 393
Query: 148 AIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRA 207
K F D Y + +++ Y KCG CS D A
Sbjct: 394 VTKYGFDRDKYAGSGLIDLYGKCG--------------CS-----------------DMA 422
Query: 208 REVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEM 267
R VFD + +V+S MI Y + EA DLFE M ++PN+ T++S++ AC
Sbjct: 423 RLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNS 482
Query: 268 GSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMI 327
++ G + D K+ I L ++D+ + G L++A ++ + +L W T++
Sbjct: 483 RLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLL 542
Query: 328 TSLGVHGLSEEA 339
++ VH E A
Sbjct: 543 SACKVHRKVEMA 554
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 117/222 (52%), Gaps = 2/222 (0%)
Query: 189 VSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE 248
+S + L+ + CG +D AR+VFD M +++V+W ++I +K +R EA +++ M
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 249 NVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGP-FLGTALIDMYSKCGSLDD 307
NV P+E+TL S+ A +++ K + H A+ G+E+ F+G+AL+DMY K G +
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTRE 219
Query: 308 AWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVH 367
A +V + E+++ +I G EA+ F+ M V P+ T+ VL +C +
Sbjct: 220 AKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGN 279
Query: 368 MHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDE 409
+ D+ G+ LM + G L ++ +Y S +D+
Sbjct: 280 LKDIGNGKLIHGLMVKS-GFESALASQTSLLTMYLRCSLVDD 320
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 93/241 (38%), Gaps = 40/241 (16%)
Query: 22 FDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQ 81
F AL N F++ +Q+HG + + G D+ L+ G + A LVFD
Sbjct: 369 FTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDT 428
Query: 82 INAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFG 141
++ D + N MI +G AL LF+ M+ G P+ T V+ AC S
Sbjct: 429 LSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLV--- 485
Query: 142 RAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV----SWTTLIAG 197
E+GC++FD R ++ + ++
Sbjct: 486 --------------------------------EEGCELFDSFRKDKIMLTNDHYACMVDL 513
Query: 198 LIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTL 257
L G+++ A + E+ + ++V W ++ K R VE + +E +E TL
Sbjct: 514 LGRAGRLEEAEMLTTEVINPDLVLWRTLLSA-CKVHRKVEMAERITRKILEIEPGDEGTL 572
Query: 258 V 258
+
Sbjct: 573 I 573
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 177/377 (46%), Gaps = 38/377 (10%)
Query: 36 NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIR 95
N K Q+H +++ GL L+ G + A VF+ + D WN ++
Sbjct: 157 NMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVS 216
Query: 96 GCTLSGSPEHALVLFKEML--LKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRF 153
L+G + A L K M F D FT+ ++ AC + G+ +HA+ K+ +
Sbjct: 217 SYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSY 272
Query: 154 WGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDE 213
D V ++N Y K + D ARE F+
Sbjct: 273 QFDIPVATALLNMYAKSNHLSD-------------------------------ARECFES 301
Query: 214 MPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG 273
M +NVVSW AMI G+ + EA LF M +EN++P+E T S++S+C + ++
Sbjct: 302 MVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEI 361
Query: 274 KWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVH 333
K + K G + +LI YS+ G+L +A + F + E +L +W ++I +L H
Sbjct: 362 KQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASH 421
Query: 334 GLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEH 393
G +EE+L +F+ M + + PD +TF+ VLSAC H V+EG R F MTE Y I EH
Sbjct: 422 GFAEESLQMFESMLQ-KLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEH 480
Query: 394 YVCMVELYTGDSELDEV 410
Y C+++L +DE
Sbjct: 481 YTCLIDLLGRAGFIDEA 497
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 101/195 (51%), Gaps = 11/195 (5%)
Query: 194 LIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVK-----CQRPVEAFDLFEGMQIE 248
L+ + D A ++FDEMP +N+V+W +I G ++ R F +
Sbjct: 77 LLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFT 136
Query: 249 NVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDA 308
+V + + + L+ CT+ ++K G +H +K G+E F T+L+ Y KCG + +A
Sbjct: 137 DVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEA 196
Query: 309 WIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEM--EKANVVPDAVTFVGVLSACV 366
VF + +R+L WN +++S ++G+ +EA L K M +K D TF +LSAC
Sbjct: 197 RRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC- 255
Query: 367 HMHDVEEGERYFSLM 381
+E+G++ +++
Sbjct: 256 ---RIEQGKQIHAIL 267
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 123/287 (42%), Gaps = 33/287 (11%)
Query: 30 TLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFT 89
+L + C +Q KQ+H + + D + LL ++ A F+ + + +
Sbjct: 250 SLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVS 309
Query: 90 WNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAI 149
WN MI G +G A+ LF +MLL+ PD+ T+ V+ +C +A + V A+
Sbjct: 310 WNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVT 369
Query: 150 KMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRARE 209
K V N++++ Y + GN + F +R +VSWT++I L + G + + +
Sbjct: 370 KKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQ 429
Query: 210 VFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGS 269
+F+ M ++ ++P++ T + ++SAC+ G
Sbjct: 430 MFESM--------------------------------LQKLQPDKITFLEVLSACSHGGL 457
Query: 270 LKLG-KWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM 315
++ G + IE T LID+ + G +D+A V M
Sbjct: 458 VQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSM 504
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 177/390 (45%), Gaps = 38/390 (9%)
Query: 41 KQVHGRIIRSGLTHDQVLLRK-LLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTL 99
K+VH +++S +Q + L+ C G M VF ++ +W ++ G
Sbjct: 336 KEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAA 395
Query: 100 SGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYV 159
+G + AL M +GF PD T V+ C A G+ +H A+K F + +
Sbjct: 396 NGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSL 455
Query: 160 QNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNV 219
++M Y KCG E ++F D + +NV
Sbjct: 456 VTSLMVMYSKCGVPEYPIRLF-------------------------------DRLEQRNV 484
Query: 220 VSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDY 279
+WTAMID YV+ ++F M + RP+ T+ +++ C+++ +LKLGK +H +
Sbjct: 485 KAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGH 544
Query: 280 AIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEA 339
+K E PF+ +I MY KCG L A F + + TW +I + G + L +A
Sbjct: 545 ILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDA 604
Query: 340 LDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVE 399
++ F++M P+ TF VLS C V+E R+F+LM Y + P EHY ++E
Sbjct: 605 INCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIE 664
Query: 400 LYTGDSELDEVYTSEEAMSLSMKTNQNVVE 429
L L+ EEA L++ ++ + ++
Sbjct: 665 L------LNRCGRVEEAQRLAVMSSSSSLQ 688
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 167/353 (47%), Gaps = 40/353 (11%)
Query: 31 LENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS 87
LE C K L KQVH I +GL ++ L KL+ A G + A VFD+ + +
Sbjct: 118 LEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNV 177
Query: 88 FTWNVMIRGCTLSGSPEHALVL--FKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVH 145
++WN ++RG +SG + VL F EM G + ++ V K+ ++A G H
Sbjct: 178 YSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTH 237
Query: 146 ALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVD 205
ALAIK + +++ ++++ YFKCG +VFD++ +V W +IAGL
Sbjct: 238 ALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGL------- 290
Query: 206 RAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGM-QIENVRPNEFTLVSLVSAC 264
+ N W EA LF M E + PN L +++
Sbjct: 291 ----------AHNKRQW--------------EALGLFRTMISEEKIYPNSVILTTILPVL 326
Query: 265 TEMGSLKLGKWIHDYAI--KNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLAT 322
++ +LKLGK +H + + KN +E PF+ + LID+Y KCG + VF +RN +
Sbjct: 327 GDVKALKLGKEVHAHVLKSKNYVE-QPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAIS 385
Query: 323 WNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGE 375
W +++ +G ++AL M++ PD VT VL C + +++G+
Sbjct: 386 WTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGK 438
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 139/303 (45%), Gaps = 38/303 (12%)
Query: 104 EHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTM 163
E AL + + +G + T+ +++AC+ + G+ VH + +R
Sbjct: 93 EVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVH---VHIRI---------- 139
Query: 164 MNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWT 223
+G + + +R T L+ ACG V A++VFDE S NV SW
Sbjct: 140 -----------NGLESNEFLR-------TKLVHMYTACGSVKDAQKVFDESTSSNVYSWN 181
Query: 224 AMIDGYVKC--QRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAI 281
A++ G V +R + F M+ V N ++L ++ + +L+ G H AI
Sbjct: 182 ALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAI 241
Query: 282 KNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALD 341
KNG+ FL T+L+DMY KCG + A VF + ER++ W MI L + EAL
Sbjct: 242 KNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALG 301
Query: 342 LFKEM-EKANVVPDAVTFVGVLSACVHMHDVEEGERYFS--LMTEHYGISPILEHYVCMV 398
LF+ M + + P++V +L + ++ G+ + L +++Y P + + ++
Sbjct: 302 LFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFV--HSGLI 359
Query: 399 ELY 401
+LY
Sbjct: 360 DLY 362
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 110/276 (39%), Gaps = 40/276 (14%)
Query: 38 KQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMI--- 94
KQ K++H +++ + L+ L+ G Y +FD++ + W MI
Sbjct: 435 KQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCY 494
Query: 95 -RGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRF 153
C L E +F+ MLL PD T V+ C A G+ +H +K F
Sbjct: 495 VENCDLRAGIE----VFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEF 550
Query: 154 WGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDE 213
+V ++ Y KCG+ + A FD
Sbjct: 551 ESIPFVSARIIKMYGKCGD-------------------------------LRSANFSFDA 579
Query: 214 MPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG 273
+ K ++WTA+I+ Y + +A + FE M PN FT +++S C++ G +
Sbjct: 580 VAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEA 639
Query: 274 KWIHDYAIK-NGIELGPFLGTALIDMYSKCGSLDDA 308
+ ++ ++ + +I++ ++CG +++A
Sbjct: 640 YRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 167/372 (44%), Gaps = 31/372 (8%)
Query: 46 RIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEH 105
R+ SG ++V +L G + +F I P WN M+ G + E
Sbjct: 340 RMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEE 399
Query: 106 ALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMN 165
A+ F++M + PDK T ++ +C + G+ +H + I+ ++++ + ++
Sbjct: 400 AISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIA 459
Query: 166 FYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAM 225
Y +C E +FD D + ++ W +M
Sbjct: 460 VYSECEKMEISECIFD------------------------------DCINELDIACWNSM 489
Query: 226 IDGYVKCQRPVEAFDLFEGM-QIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNG 284
I G+ +A LF M Q + PNE + +++S+C+ + SL G+ H +K+G
Sbjct: 490 ISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSG 549
Query: 285 IELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFK 344
F+ TAL DMY KCG +D A F + +N WN MI G +G +EA+ L++
Sbjct: 550 YVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYR 609
Query: 345 EMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGD 404
+M + PD +TFV VL+AC H VE G S M +GI P L+HY+C+V+
Sbjct: 610 KMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRA 669
Query: 405 SELDEVYTSEEA 416
L++ EA
Sbjct: 670 GRLEDAEKLAEA 681
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 190/437 (43%), Gaps = 80/437 (18%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNV-------- 92
K +HG I+R G+ D L +LL G +YA VFD+++ D ++WN
Sbjct: 26 KVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKV 85
Query: 93 -----------------------MIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVI 129
MI G E ALV++K M+ GF P +FT V+
Sbjct: 86 GDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVL 145
Query: 130 KACIASNAFD--FGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCS 187
AC S D FG H +A+K + +V N +++ Y KCG
Sbjct: 146 SAC--SKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF--------------- 188
Query: 188 VVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLF----- 242
VD VF+ + N VS+TA+I G + + +EA +F
Sbjct: 189 ---------------IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCE 233
Query: 243 EGMQIENV-RPNEFTLVSLVSACTEMGSL---KLGKWIHDYAIKNGIELGPFLGTALIDM 298
+G+Q+++V N ++ + C + + +LGK IH A++ G L +L+++
Sbjct: 234 KGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEI 293
Query: 299 YSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTF 358
Y+K ++ A ++F M E N+ +WN MI G S+++++ M + P+ VT
Sbjct: 294 YAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTC 353
Query: 359 VGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMS 418
+ VL AC DVE G R FS + + P + + M+ Y+ +E ++ M
Sbjct: 354 ISVLGACFRSGDVETGRRIFSSIPQ-----PSVSAWNAMLSGYSNYEHYEEAISNFRQMQ 408
Query: 419 L-SMKTNQNVVELLQES 434
++K ++ + ++ S
Sbjct: 409 FQNLKPDKTTLSVILSS 425
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 120/224 (53%), Gaps = 1/224 (0%)
Query: 141 GRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIA 200
G+ +H ++M DTY+ N +++ Y +CG+ + KVFD+M V SW +
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 201 CGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSL 260
G + A EVFD MP ++VVSW MI V+ +A +++ M + P+ FTL S+
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 261 VSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWI-VFGIMTERN 319
+SAC+++ G H A+K G++ F+G AL+ MY+KCG + D + VF +++ N
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 320 LATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLS 363
++ +I L EA+ +F+ M + V D+V +LS
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 144/342 (42%), Gaps = 48/342 (14%)
Query: 10 ANVPHFNTPTTRF----------DSQQALVTLENCCNFKQL---KQVHGRIIRSGLTHDQ 56
+N H+ + F D V L +C + L KQ+HG +IR+ ++ +
Sbjct: 392 SNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNS 451
Query: 57 VLLRKLLQHSCAYGKMNYASLVFDQ-INAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLL 115
++ L+ KM + +FD IN D WN MI G + AL+LF+ M
Sbjct: 452 HIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQ 511
Query: 116 KG-FAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEE 174
P++ ++ V+ +C + GR H L +K + D++V+ + + Y KCG
Sbjct: 512 TAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCG--- 568
Query: 175 DGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQR 234
++D AR+ FD + KN V W MI GY R
Sbjct: 569 ----------------------------EIDSARQFFDAVLRKNTVIWNEMIHGYGHNGR 600
Query: 235 PVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIK-NGIELGPFLGT 293
EA L+ M +P+ T VS+++AC+ G ++ G I + +GIE
Sbjct: 601 GDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYI 660
Query: 294 ALIDMYSKCGSLDDA-WIVFGIMTERNLATWNTMITSLGVHG 334
++D + G L+DA + + + W +++S VHG
Sbjct: 661 CIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHG 702
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 28 LVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS 87
L + C+ +Q HG +++SG D + L C G+++ A FD + ++
Sbjct: 526 LSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNT 585
Query: 88 FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHAL 147
WN MI G +G + A+ L+++M+ G PD T+ V+ AC S + G + L
Sbjct: 586 VIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETG--LEIL 643
Query: 148 AIKMRFWG-----DTYVQNTMMNFYFKCGNEEDGCKVFDKM-RGCSVVSWTTLIAGLIAC 201
+ R G D Y+ +++ + G ED K+ + S V W L++
Sbjct: 644 SSMQRIHGIEPELDHYI--CIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVH 701
Query: 202 GKVDRAREVFDEM 214
G V AR V +++
Sbjct: 702 GDVSLARRVAEKL 714
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 184/386 (47%), Gaps = 9/386 (2%)
Query: 31 LENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS 87
L C F + +Q+H I SGL D VL+ KL+ A+ ++ A + +
Sbjct: 90 LSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHP 149
Query: 88 FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHAL 147
WNV+I + + ++ ++K M+ KG D+FTYP VIKAC A F +GR VH
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 148 AIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRA 207
+ YV N +++ Y + G + ++FD+M VSW +I + K+ A
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEA 269
Query: 208 REVFDEM----PSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSA 263
++ D M ++V+W + G ++ + A + GM+ NVR +++ + A
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKA 329
Query: 264 CTEMGSLKLGKWIHDYAIKNGIELGPF--LGTALIDMYSKCGSLDDAWIVFGIMTERNLA 321
C+ +G+LK GK H I++ + +LI MYS+C L A+IVF + +L+
Sbjct: 330 CSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLS 389
Query: 322 TWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLM 381
TWN++I+ + SEE L KEM + P+ +T +L + +++ G+ + +
Sbjct: 390 TWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYI 449
Query: 382 TEHYGISPILEHYVCMVELYTGDSEL 407
L + +V++Y E+
Sbjct: 450 LRRQSYKDCLILWNSLVDMYAKSGEI 475
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 180/387 (46%), Gaps = 19/387 (4%)
Query: 36 NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIR 95
+F + VHG I S + + L+ +GK++ A +FD+++ D+ +WN +I
Sbjct: 199 DFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIIN 258
Query: 96 GCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHAL--AIKMRF 153
T A L M L G T+ + C+ + G + AL + MR
Sbjct: 259 CYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEA-----GNYIGALNCVVGMRN 313
Query: 154 WGDTYVQNTMMNFYFKC---GNEEDGCKVFD--KMRGCSVVS-----WTTLIAGLIACGK 203
M+N C G + G KVF +R CS +LI C
Sbjct: 314 CNVRIGSVAMINGLKACSHIGALKWG-KVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSD 372
Query: 204 VDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSA 263
+ A VF ++ + ++ +W ++I G+ +R E L + M + PN TL S++
Sbjct: 373 LRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPL 432
Query: 264 CTEMGSLKLGKWIHDYAIK-NGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLAT 322
+G+L+ GK H Y ++ + L +L+DMY+K G + A VF M +R+ T
Sbjct: 433 FARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVT 492
Query: 323 WNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMT 382
+ ++I G G E AL FK+M+++ + PD VT V VLSAC H + V EG F+ M
Sbjct: 493 YTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKME 552
Query: 383 EHYGISPILEHYVCMVELYTGDSELDE 409
+GI LEHY CMV+LY LD+
Sbjct: 553 HVFGIRLRLEHYSCMVDLYCRAGYLDK 579
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 146/369 (39%), Gaps = 67/369 (18%)
Query: 21 RFDSQQALVTLENCCNFKQLKQ---VHGRIIRS-GLTHDQVLLRK-LLQHSCAYGKMNYA 75
R S + L+ C + LK H +IRS +HD +R L+ + +A
Sbjct: 317 RIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHA 376
Query: 76 SLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIAS 135
+VF Q+ A TWN +I G + E L KEMLL GF P+ T ++
Sbjct: 377 FIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARV 436
Query: 136 NAFDFGRAVHALAIKMRFWGDTYV-QNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTL 194
G+ H ++ + + D + N++++ Y K G +VFD MR V++T+L
Sbjct: 437 GNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSL 496
Query: 195 IAGLIACGKVDRAREVFDEM-------------------PSKNVVS-------------- 221
I G GK + A F +M N+V
Sbjct: 497 IDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFG 556
Query: 222 -------WTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGK 274
++ M+D Y + +A D+F + E P+ +L+ AC G+ +G+
Sbjct: 557 IRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYE---PSSAMCATLLKACLIHGNTNIGE 613
Query: 275 WIHDYAIKNGIELGP-FLG--TALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLG 331
W D + +E P LG L DMY+ GS W L T T+++ LG
Sbjct: 614 WAADKLL---LETKPEHLGHYMLLADMYAVTGS----W--------SKLVTVKTLLSDLG 658
Query: 332 VHGLSEEAL 340
V E AL
Sbjct: 659 VQKAHEFAL 667
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 130/345 (37%), Gaps = 68/345 (19%)
Query: 29 VTLENCCNF--KQLKQVHGRIIRSGLTHD-----QVLLRKLLQHSCAYGKMNYASLVFDQ 81
+T+ C F + KQ+ I + THD QVL +H ++G++ A F
Sbjct: 13 LTVSEICKFIPQSWKQLPRPISETSKTHDDESVPQVLFNSF-RHCISHGQLYEAFRTFSL 71
Query: 82 INAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFG 141
+ SGS H VL+ L + C+ N F G
Sbjct: 72 LRYQ--------------SGS--HEFVLYSSASL-------------LSTCVGFNEFVPG 102
Query: 142 RAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIAC 201
+ +HA I D+ + ++ FY A
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFY-------------------------------SAF 131
Query: 202 GKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLV 261
+D A+ + + + + W +I Y++ +R E+ +++ M + +R +EFT S++
Sbjct: 132 NLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVI 191
Query: 262 SACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLA 321
AC + G+ +H + ++ ALI MY + G +D A +F M+ER+
Sbjct: 192 KACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAV 251
Query: 322 TWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACV 366
+WN +I EA L M + V VT+ + C+
Sbjct: 252 SWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCL 296
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 4/142 (2%)
Query: 237 EAFDLFEGMQIENVRPNEFTL---VSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGT 293
EAF F ++ ++ +EF L SL+S C G+ +H + I +G+E L
Sbjct: 64 EAFRTFSLLRYQS-GSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVP 122
Query: 294 ALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVP 353
L+ YS LD+A + + WN +I S + +E++ ++K M +
Sbjct: 123 KLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRA 182
Query: 354 DAVTFVGVLSACVHMHDVEEGE 375
D T+ V+ AC + D G
Sbjct: 183 DEFTYPSVIKACAALLDFAYGR 204
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 184/386 (47%), Gaps = 9/386 (2%)
Query: 31 LENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS 87
L C F + +Q+H I SGL D VL+ KL+ A+ ++ A + +
Sbjct: 90 LSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHP 149
Query: 88 FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHAL 147
WNV+I + + ++ ++K M+ KG D+FTYP VIKAC A F +GR VH
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 148 AIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRA 207
+ YV N +++ Y + G + ++FD+M VSW +I + K+ A
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEA 269
Query: 208 REVFDEM----PSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSA 263
++ D M ++V+W + G ++ + A + GM+ NVR +++ + A
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKA 329
Query: 264 CTEMGSLKLGKWIHDYAIKNGIELGPF--LGTALIDMYSKCGSLDDAWIVFGIMTERNLA 321
C+ +G+LK GK H I++ + +LI MYS+C L A+IVF + +L+
Sbjct: 330 CSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLS 389
Query: 322 TWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLM 381
TWN++I+ + SEE L KEM + P+ +T +L + +++ G+ + +
Sbjct: 390 TWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYI 449
Query: 382 TEHYGISPILEHYVCMVELYTGDSEL 407
L + +V++Y E+
Sbjct: 450 LRRQSYKDCLILWNSLVDMYAKSGEI 475
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 180/387 (46%), Gaps = 19/387 (4%)
Query: 36 NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIR 95
+F + VHG I S + + L+ +GK++ A +FD+++ D+ +WN +I
Sbjct: 199 DFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIIN 258
Query: 96 GCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHAL--AIKMRF 153
T A L M L G T+ + C+ + G + AL + MR
Sbjct: 259 CYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEA-----GNYIGALNCVVGMRN 313
Query: 154 WGDTYVQNTMMNFYFKC---GNEEDGCKVFD--KMRGCSVVS-----WTTLIAGLIACGK 203
M+N C G + G KVF +R CS +LI C
Sbjct: 314 CNVRIGSVAMINGLKACSHIGALKWG-KVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSD 372
Query: 204 VDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSA 263
+ A VF ++ + ++ +W ++I G+ +R E L + M + PN TL S++
Sbjct: 373 LRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPL 432
Query: 264 CTEMGSLKLGKWIHDYAIK-NGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLAT 322
+G+L+ GK H Y ++ + L +L+DMY+K G + A VF M +R+ T
Sbjct: 433 FARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVT 492
Query: 323 WNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMT 382
+ ++I G G E AL FK+M+++ + PD VT V VLSAC H + V EG F+ M
Sbjct: 493 YTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKME 552
Query: 383 EHYGISPILEHYVCMVELYTGDSELDE 409
+GI LEHY CMV+LY LD+
Sbjct: 553 HVFGIRLRLEHYSCMVDLYCRAGYLDK 579
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 146/369 (39%), Gaps = 67/369 (18%)
Query: 21 RFDSQQALVTLENCCNFKQLKQ---VHGRIIRS-GLTHDQVLLRK-LLQHSCAYGKMNYA 75
R S + L+ C + LK H +IRS +HD +R L+ + +A
Sbjct: 317 RIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHA 376
Query: 76 SLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIAS 135
+VF Q+ A TWN +I G + E L KEMLL GF P+ T ++
Sbjct: 377 FIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARV 436
Query: 136 NAFDFGRAVHALAIKMRFWGDTYV-QNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTL 194
G+ H ++ + + D + N++++ Y K G +VFD MR V++T+L
Sbjct: 437 GNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSL 496
Query: 195 IAGLIACGKVDRAREVFDEM-------------------PSKNVVS-------------- 221
I G GK + A F +M N+V
Sbjct: 497 IDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFG 556
Query: 222 -------WTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGK 274
++ M+D Y + +A D+F + E P+ +L+ AC G+ +G+
Sbjct: 557 IRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYE---PSSAMCATLLKACLIHGNTNIGE 613
Query: 275 WIHDYAIKNGIELGP-FLG--TALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLG 331
W D + +E P LG L DMY+ GS W L T T+++ LG
Sbjct: 614 WAADKLL---LETKPEHLGHYMLLADMYAVTGS----W--------SKLVTVKTLLSDLG 658
Query: 332 VHGLSEEAL 340
V E AL
Sbjct: 659 VQKAHEFAL 667
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 130/345 (37%), Gaps = 68/345 (19%)
Query: 29 VTLENCCNF--KQLKQVHGRIIRSGLTHD-----QVLLRKLLQHSCAYGKMNYASLVFDQ 81
+T+ C F + KQ+ I + THD QVL +H ++G++ A F
Sbjct: 13 LTVSEICKFIPQSWKQLPRPISETSKTHDDESVPQVLFNSF-RHCISHGQLYEAFRTFSL 71
Query: 82 INAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFG 141
+ SGS H VL+ L + C+ N F G
Sbjct: 72 LRYQ--------------SGS--HEFVLYSSASL-------------LSTCVGFNEFVPG 102
Query: 142 RAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIAC 201
+ +HA I D+ + ++ FY A
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFY-------------------------------SAF 131
Query: 202 GKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLV 261
+D A+ + + + + W +I Y++ +R E+ +++ M + +R +EFT S++
Sbjct: 132 NLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVI 191
Query: 262 SACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLA 321
AC + G+ +H + ++ ALI MY + G +D A +F M+ER+
Sbjct: 192 KACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAV 251
Query: 322 TWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACV 366
+WN +I EA L M + V VT+ + C+
Sbjct: 252 SWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCL 296
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 4/142 (2%)
Query: 237 EAFDLFEGMQIENVRPNEFTL---VSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGT 293
EAF F ++ ++ +EF L SL+S C G+ +H + I +G+E L
Sbjct: 64 EAFRTFSLLRYQS-GSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVP 122
Query: 294 ALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVP 353
L+ YS LD+A + + WN +I S + +E++ ++K M +
Sbjct: 123 KLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRA 182
Query: 354 DAVTFVGVLSACVHMHDVEEGE 375
D T+ V+ AC + D G
Sbjct: 183 DEFTYPSVIKACAALLDFAYGR 204
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 178/364 (48%), Gaps = 43/364 (11%)
Query: 59 LRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGF 118
+R +L+H + G +N + S N ++ SG P AL+ F+ +
Sbjct: 1 MRFILRHLHSLGVINKFDSFLLHFHTK-SLKSNHTLKQYLESGEPIKALLDFRHRFRQSP 59
Query: 119 A-PDKFTYPFVIKACIASNAFDF-GRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDG 176
+ D F+ F IK A A GR +HAL K+ F +Q +++ FY G+
Sbjct: 60 SFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGD---- 115
Query: 177 CKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK-NVVSWTAMIDGYVKCQRP 235
VD AR+VFDE P K N+V WTAMI Y + +
Sbjct: 116 ---------------------------VDYARQVFDETPEKQNIVLWTAMISAYTENENS 148
Query: 236 VEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGP--FLGT 293
VEA +LF+ M+ E + + + +SAC ++G++++G+ I+ +IK L L
Sbjct: 149 VEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRN 208
Query: 294 ALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKAN--- 350
+L++MY K G + A +F +++ T+ +MI ++G ++E+L+LFK+M+ +
Sbjct: 209 SLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQ 268
Query: 351 ---VVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSEL 407
+ P+ VTF+GVL AC H VEEG+R+F M Y + P H+ CMV+L+ L
Sbjct: 269 DTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHL 328
Query: 408 DEVY 411
+ +
Sbjct: 329 KDAH 332
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 138/324 (42%), Gaps = 43/324 (13%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFT-WNVMIRGCTL 99
+Q+H + + G + L+ + G ++YA VFD+ + W MI T
Sbjct: 85 RQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTE 144
Query: 100 SGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKM--RFWGDT 157
+ + A+ LFK M + D + AC A G +++ +IK R D
Sbjct: 145 NENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDL 204
Query: 158 YVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK 217
++N+++N Y K G E K+FD+ V ++T++I G G+ + E+F +M +
Sbjct: 205 TLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKT- 263
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGK--- 274
ID + Q V + PN+ T + ++ AC+ G ++ GK
Sbjct: 264 --------ID---QSQDTV-------------ITPNDVTFIGVLMACSHSGLVEEGKRHF 299
Query: 275 --WIHDYAIK-NGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM-TERNLATWNTMITSL 330
I DY +K G ++D++ + G L DA M + N W T++ +
Sbjct: 300 KSMIMDYNLKPREAHFG-----CMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGAC 354
Query: 331 GVHG---LSEEALDLFKEMEKANV 351
+HG L EE E+++ +V
Sbjct: 355 SLHGNVELGEEVQRRIFELDRDHV 378
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 164/340 (48%), Gaps = 4/340 (1%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSG 101
QVH I SG+ + VL+ KL+ A+ N A + + + WNV+I +
Sbjct: 64 QVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNE 123
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQN 161
E + +K M+ KG PD FTYP V+KAC + FGR VH + YV N
Sbjct: 124 LFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCN 183
Query: 162 TMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEM----PSK 217
+++ Y + N ++FD+M VSW +I + G A E+FD+M
Sbjct: 184 ALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEV 243
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
+V++W + G ++ V A L M+ + ++ + AC+ +G+++LGK IH
Sbjct: 244 SVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIH 303
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSE 337
AI + + + LI MYSKC L A IVF E +L TWN++I+ SE
Sbjct: 304 GLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSE 363
Query: 338 EALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERY 377
EA L +EM A P+++T +L C + +++ G+ +
Sbjct: 364 EASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEF 403
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 149/315 (47%), Gaps = 32/315 (10%)
Query: 88 FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHAL 147
TWN++ GC +G+ AL L M + D +KAC A G+ +H L
Sbjct: 246 ITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGL 305
Query: 148 AIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRA 207
AI + G V+NT++ Y KC + + A
Sbjct: 306 AIHSSYDGIDNVRNTLITMYSKCKD-------------------------------LRHA 334
Query: 208 REVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEM 267
VF + ++ +W ++I GY + + EA L M + +PN TL S++ C +
Sbjct: 335 LIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARI 394
Query: 268 GSLKLGKWIHDYAIKNG-IELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTM 326
+L+ GK H Y ++ + L +L+D+Y+K G + A V +M++R+ T+ ++
Sbjct: 395 ANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSL 454
Query: 327 ITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYG 386
I G G AL LFKEM ++ + PD VT V VLSAC H V EGER F M YG
Sbjct: 455 IDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYG 514
Query: 387 ISPILEHYVCMVELY 401
I P L+H+ CMV+LY
Sbjct: 515 IRPCLQHFSCMVDLY 529
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 148/346 (42%), Gaps = 45/346 (13%)
Query: 16 NTPTTRFDSQQALVTLENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKM 72
N PT+ D ++ L+ C + K++HG I S + L+ +
Sbjct: 273 NFPTS-LDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDL 331
Query: 73 NYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKAC 132
+A +VF Q TWN +I G E A L +EML+ GF P+ T ++ C
Sbjct: 332 RHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLC 391
Query: 133 IASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWT 192
G+ H ++ + + D TM+ W
Sbjct: 392 ARIANLQHGKEFHCYILRRKCFKDY----TML--------------------------WN 421
Query: 193 TLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRP 252
+L+ GK+ A++V D M ++ V++T++IDGY A LF+ M ++P
Sbjct: 422 SLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKP 481
Query: 253 NEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELG--PFLG--TALIDMYSKCGSLDDA 308
+ T+V+++SAC+ + G+ + +K E G P L + ++D+Y + G L A
Sbjct: 482 DHVTVVAVLSACSHSKLVHEGERLF---MKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKA 538
Query: 309 W-IVFGIMTERNLATWNTMITSLGVHG---LSEEALDLFKEMEKAN 350
I+ + + + ATW T++ + +HG + + A + EM+ N
Sbjct: 539 KDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPEN 584
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 96/242 (39%), Gaps = 35/242 (14%)
Query: 128 VIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFY--FKCGNEEDGCKVFDKMRG 185
++ AC+ AF G VHA I + + ++ FY F NE
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNE------------ 96
Query: 186 CSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGM 245
A+ + + + + W +I Y K + E ++ M
Sbjct: 97 ---------------------AQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRM 135
Query: 246 QIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSL 305
+ +RP+ FT S++ AC E + G+ +H + + ++ ALI MY + ++
Sbjct: 136 VSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNM 195
Query: 306 DDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSAC 365
A +F M ER+ +WN +I G+ EA +LF +M + V +T+ + C
Sbjct: 196 GIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGC 255
Query: 366 VH 367
+
Sbjct: 256 LQ 257
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 5/144 (3%)
Query: 237 EAFDLFEGMQIENVRPNEFTLV-----SLVSACTEMGSLKLGKWIHDYAIKNGIELGPFL 291
+AF F +++++ LV SL+SAC ++ + G +H + I +G+E L
Sbjct: 21 DAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVL 80
Query: 292 GTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANV 351
L+ YS ++A + + WN +I S + L EE + +K M +
Sbjct: 81 VPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGI 140
Query: 352 VPDAVTFVGVLSACVHMHDVEEGE 375
PDA T+ VL AC DV G
Sbjct: 141 RPDAFTYPSVLKACGETLDVAFGR 164
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 182/380 (47%), Gaps = 40/380 (10%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
+QVH +I+ G + L+ YG + + VF+ + D +WN ++ G +
Sbjct: 104 RQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRN 163
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G + AL +F M + +FT V+K C + G+ VHA+ + D V
Sbjct: 164 GKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVT--GRDLVVL 221
Query: 161 NT-MMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNV 219
T M++FY G + KV++ + + DE
Sbjct: 222 GTAMISFYSSVGLINEAMKVYNSLNVHT------------------------DE------ 251
Query: 220 VSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDY 279
V ++I G ++ + EAF L + RPN L S ++ C++ L +GK IH
Sbjct: 252 VMLNSLISGCIRNRNYKEAFLL-----MSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCV 306
Query: 280 AIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEA 339
A++NG L L+DMY KCG + A +F + +++ +W +MI + V+G +A
Sbjct: 307 ALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKA 366
Query: 340 LDLFKEM--EKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCM 397
L++F+EM E + V+P++VTF+ V+SAC H V+EG+ F +M E Y + P EHYVC
Sbjct: 367 LEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCF 426
Query: 398 VELYTGDSELDEVYTSEEAM 417
+++ + E +E++ E M
Sbjct: 427 IDILSKAGETEEIWRLVERM 446
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 93/177 (52%), Gaps = 4/177 (2%)
Query: 207 AREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPN--EFTLVSLVSAC 264
A +FDE+P +++ S + + +++ P + LF +QI P+ T ++ AC
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALF--LQIHRASPDLSSHTFTPVLGAC 94
Query: 265 TEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWN 324
+ + + G+ +H IK G E G TALIDMYSK G L D+ VF + E++L +WN
Sbjct: 95 SLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWN 154
Query: 325 TMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLM 381
+++ +G +EAL +F M + V T V+ C + +++G++ +++
Sbjct: 155 ALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMV 211
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 173/368 (47%), Gaps = 50/368 (13%)
Query: 43 VHGRIIRSGLTHDQVLLRKLLQHSCAYGKMN--------YASLVFDQINAPDSFTWNVMI 94
+H +++ G+ +D ++ L+ CAY + YAS D I S I
Sbjct: 268 LHCLVVKCGMVNDISVVTSLV---CAYSRCGCLVSAERLYASAKQDSIVGLTS------I 318
Query: 95 RGCTL-SGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRF 153
C G + A+V F + D ++ C S+ D G ++H AIK
Sbjct: 319 VSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGL 378
Query: 154 WGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDE 213
T V N ++ Y K FD V+ +F++
Sbjct: 379 CTKTLVVNGLITMYSK----------FDD---------------------VETVLFLFEQ 407
Query: 214 MPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN-VRPNEFTLVSLVSACTEMGSLKL 272
+ ++SW ++I G V+ R AF++F M + + P+ T+ SL++ C+++ L L
Sbjct: 408 LQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNL 467
Query: 273 GKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGV 332
GK +H Y ++N E F+ TALIDMY+KCG+ A VF + ATWN+MI+ +
Sbjct: 468 GKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSL 527
Query: 333 HGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILE 392
GL AL + EM + + PD +TF+GVLSAC H V+EG+ F M + +GISP L+
Sbjct: 528 SGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQ 587
Query: 393 HYVCMVEL 400
HY MV L
Sbjct: 588 HYALMVGL 595
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 129/268 (48%), Gaps = 36/268 (13%)
Query: 99 LSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIAS-NAFDFG-RAVHALAIKMRFWGD 156
+S SP + +F+++L P+ FT ++A S N+F V K
Sbjct: 28 ISSSP---ITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRF 84
Query: 157 TYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPS 216
YV+ +++N Y K +GC V A+ +FDEMP
Sbjct: 85 VYVKTSLLNLYLK--------------KGC-----------------VTSAQMLFDEMPE 113
Query: 217 KNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWI 276
++ V W A+I GY + +A+ LF M + P+ TLV+L+ C + G + G+ +
Sbjct: 114 RDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSV 173
Query: 277 HDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLS 336
H A K+G+EL + ALI YSKC L A ++F M +++ +WNTMI + GL
Sbjct: 174 HGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQ 233
Query: 337 EEALDLFKEMEKANVVPDAVTFVGVLSA 364
EEA+ +FK M + NV VT + +LSA
Sbjct: 234 EEAITVFKNMFEKNVEISPVTIINLLSA 261
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 168/399 (42%), Gaps = 66/399 (16%)
Query: 36 NFK-QLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMI 94
+FK Q++QV + +SGL + LL G + A ++FD++ D+ WN +I
Sbjct: 64 SFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALI 123
Query: 95 RGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFW 154
G + +G A LF ML +GF+P T ++ C GR+VH +A K
Sbjct: 124 CGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLE 183
Query: 155 GDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEM 214
D+ V+N +++FY KC +F +M+ S VSW T+I G + A VF M
Sbjct: 184 LDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNM 243
Query: 215 PSKNV--------------VSW-------------------TAMIDGYVKCQRPVEAFDL 241
KNV VS T+++ Y +C V A L
Sbjct: 244 FEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERL 303
Query: 242 FEGMQIENV-------------------------------RPNEFTLVSLVSACTEMGSL 270
+ + +++ + + LV ++ C + +
Sbjct: 304 YASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHI 363
Query: 271 KLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSL 330
+G +H YAIK+G+ + LI MYSK ++ +F + E L +WN++I+
Sbjct: 364 DIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGC 423
Query: 331 GVHGLSEEALDLFKEME-KANVVPDAVTFVGVLSACVHM 368
G + A ++F +M ++PDA+T +L+ C +
Sbjct: 424 VQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQL 462
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 53/116 (45%)
Query: 35 CNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMI 94
C K++HG +R+ ++ + L+ G A VF I AP + TWN MI
Sbjct: 463 CCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMI 522
Query: 95 RGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIK 150
G +LSG AL + EM KG PD+ T+ V+ AC D G+ IK
Sbjct: 523 SGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIK 578
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 241 LFEGMQIENVRPNEFTL-VSLVSACTEMGSLKLG-KWIHDYAIKNGIELGPFLGTALIDM 298
+F + ++ PN FT+ + L + T S KL + + + K+G++ ++ T+L+++
Sbjct: 35 IFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNL 94
Query: 299 YSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTF 358
Y K G + A ++F M ER+ WN +I +G +A LF M + P A T
Sbjct: 95 YLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTL 154
Query: 359 VGVLSACVHMHDVEEGE 375
V +L C V +G
Sbjct: 155 VNLLPFCGQCGFVSQGR 171
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 179/370 (48%), Gaps = 37/370 (10%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYG-KMNYASLVFDQINAPDSFTWNVMIRGCTL 99
+ VHG IR G V + L + G ++ A VFD+ + +WN ++ G
Sbjct: 246 RSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVH 305
Query: 100 SGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYV 159
+ + AL +F M+ + D+ T +++ C +F+
Sbjct: 306 NQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC-------------------KFFEQPLP 346
Query: 160 QNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNV 219
++ + G E + V+ ++LI +C VD A V D M K+V
Sbjct: 347 CKSIHGVIIRRGYESNE------------VALSSLIDAYTSCSLVDDAGTVLDSMTYKDV 394
Query: 220 VSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDY 279
VS + MI G R EA +F M+ PN T++SL++AC+ L+ KW H
Sbjct: 395 VSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGI 451
Query: 280 AIKNGIELGPF-LGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEE 338
AI+ + + +GT+++D Y+KCG+++ A F +TE+N+ +W +I++ ++GL ++
Sbjct: 452 AIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDK 511
Query: 339 ALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMV 398
AL LF EM++ P+AVT++ LSAC H V++G F M E P L+HY C+V
Sbjct: 512 ALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIV 570
Query: 399 ELYTGDSELD 408
++ + E+D
Sbjct: 571 DMLSRAGEID 580
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 183/393 (46%), Gaps = 51/393 (12%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNY--ASLVFDQINAPDSFTWNVMIRGCT 98
+++HG +IRSG + +L C Y + A +FD+++ D +W+V+IR
Sbjct: 145 EKIHGYVIRSGFCGISSVQNSIL---CMYADSDSLSARKLFDEMSERDVISWSVVIRSYV 201
Query: 99 LSGSPEHALVLFKEMLLKGFA-PDKFTYPFVIKACIASNAFDFGRAVHALAIKMRF-WGD 156
S P L LFKEM+ + PD T V+KAC D GR+VH +I+ F D
Sbjct: 202 QSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLAD 261
Query: 157 TYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPS 216
+V N++++ Y K FD VD A VFDE
Sbjct: 262 VFVCNSLIDMY---------SKGFD----------------------VDSAFRVFDETTC 290
Query: 217 KNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWI 276
+N+VSW +++ G+V QR EA ++F M E V +E T+VSL+ C K I
Sbjct: 291 RNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSI 350
Query: 277 HDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLS 336
H I+ G E ++LID Y+ C +DDA V MT +++ + +TMI+ L G S
Sbjct: 351 HGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRS 410
Query: 337 EEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVC 396
+EA+ +F M P+A+T + +L+AC D L T + + +
Sbjct: 411 DEAISIFCHMRDT---PNAITVISLLNACSVSAD---------LRTSKWAHGIAIRRSLA 458
Query: 397 MVELYTGDSELDEVYTSEEAMSLSMKTNQNVVE 429
+ ++ G S +D Y A+ ++ +T + E
Sbjct: 459 INDISVGTSIVD-AYAKCGAIEMARRTFDQITE 490
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 36/289 (12%)
Query: 79 FDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAF 138
FD +N+ DS +WNV++ G G E L F ++ + GF P+ T VI AC S F
Sbjct: 84 FDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHAC-RSLWF 142
Query: 139 DFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGL 198
D G +H I+ F G + VQN+++ Y + D
Sbjct: 143 D-GEKIHGYVIRSGFCGISSVQNSILCMY----ADSDSLS-------------------- 177
Query: 199 IACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE-NVRPNEFTL 257
AR++FDEM ++V+SW+ +I YV+ + PV LF+ M E P+ T+
Sbjct: 178 --------ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTV 229
Query: 258 VSLVSACTEMGSLKLGKWIHDYAIKNGIELGP-FLGTALIDMYSKCGSLDDAWIVFGIMT 316
S++ ACT M + +G+ +H ++I+ G +L F+ +LIDMYSK +D A+ VF T
Sbjct: 230 TSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETT 289
Query: 317 ERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSAC 365
RN+ +WN+++ + +EAL++F M + V D VT V +L C
Sbjct: 290 CRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC 338
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 121/286 (42%), Gaps = 39/286 (13%)
Query: 28 LVTLENCCNFKQ----LKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQIN 83
+V+L C F + K +HG IIR G ++V L L+ + ++ A V D +
Sbjct: 331 VVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMT 390
Query: 84 APDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRA 143
D + + MI G +G + A+ +F M P+ T ++ AC S +
Sbjct: 391 YKDVVSCSTMISGLAHAGRSDEAISIFCHMR---DTPNAITVISLLNACSVSADLRTSKW 447
Query: 144 VHALAIKMRFW-GDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACG 202
H +AI+ D V ++++ Y KCG E + FD++ +++SWT +I+ G
Sbjct: 448 AHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAING 507
Query: 203 KVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVS 262
D+A +FDEM K GY PN T ++ +S
Sbjct: 508 LPDKALALFDEMKQK----------GYT---------------------PNAVTYLAALS 536
Query: 263 ACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDA 308
AC G +K G I ++ + + ++DM S+ G +D A
Sbjct: 537 ACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTA 582
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 138/323 (42%), Gaps = 61/323 (18%)
Query: 94 IRGCTLSGSPEHALVLFKEMLLKGFA-PDKFTYPFVIKACIASNAFDFGRAVHALAIKMR 152
I+ ++SG + + E+ G D F +P V KAC +
Sbjct: 16 IKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAK--------------LSWL 61
Query: 153 FWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFD 212
F G N++ +FY KCG+ L +GL RE FD
Sbjct: 62 FQG-----NSIADFYMKCGD---------------------LCSGL---------RE-FD 85
Query: 213 EMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKL 272
M S++ VSW ++ G + E F +++ PN TLV ++ AC +
Sbjct: 86 CMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL--WFD 143
Query: 273 GKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGV 332
G+ IH Y I++G + +++ MY+ SL A +F M+ER++ +W+ +I S
Sbjct: 144 GEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQ 202
Query: 333 HGLSEEALDLFKEM-EKANVVPDAVTFVGVLSACVHMHDVEEGERYFSL-MTEHYGISPI 390
L LFKEM +A PD VT VL AC M D++ G + + ++ +
Sbjct: 203 SKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADV 262
Query: 391 LEHYVC--MVELYTGDSELDEVY 411
+VC ++++Y+ ++D +
Sbjct: 263 ---FVCNSLIDMYSKGFDVDSAF 282
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 166/379 (43%), Gaps = 31/379 (8%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
K +H I SG + + KL+ G VFD ++ + T +I G +
Sbjct: 175 KMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIEN 234
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
E L LF M P+ TY + AC S G+ +HAL K + ++
Sbjct: 235 ELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIE 294
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
+ +M+ Y KCG+ ED +F+ VS T ++ GL G + A + F M
Sbjct: 295 SALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRM------ 348
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
L G++I+ + VS + SL LGK +H
Sbjct: 349 --------------------LQAGVEIDANVVSAVLGVSFID-----NSLGLGKQLHSLV 383
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEAL 340
IK F+ LI+MYSKCG L D+ VF M +RN +WN+MI + HG AL
Sbjct: 384 IKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAAL 443
Query: 341 DLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVEL 400
L++EM V P VTF+ +L AC H+ +++G + M E +GI P EHY C++++
Sbjct: 444 KLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDM 503
Query: 401 YTGDSELDEVYTSEEAMSL 419
L E + +++ L
Sbjct: 504 LGRAGLLKEAKSFIDSLPL 522
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 121/232 (52%), Gaps = 2/232 (0%)
Query: 187 SVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQ 246
++V W +L++ CGK+ A ++FDEMP ++V+S + G+++ + F L + M
Sbjct: 89 ALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRM- 147
Query: 247 IENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLD 306
+ + + TL ++S C + K IH AI +G + +G LI Y KCG
Sbjct: 148 LGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSV 207
Query: 307 DAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACV 366
VF M+ RN+ T +I+ L + L E+ L LF M + V P++VT++ L+AC
Sbjct: 208 SGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACS 267
Query: 367 HMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMS 418
+ EG++ +L+ + YGI L ++++Y+ +++ +T E+ +
Sbjct: 268 GSQRIVEGQQIHALLWK-YGIESELCIESALMDMYSKCGSIEDAWTIFESTT 318
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 177/381 (46%), Gaps = 34/381 (8%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKL--LQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCT 98
KQ+H + I+ G + L + C+ ++ AS VF + +P+ +W +I G
Sbjct: 345 KQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVE-ASRVFGAMVSPNVVSWTTLILGLV 403
Query: 99 LSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTY 158
G + L EM+ + P+ T V++AC +HA ++ G+
Sbjct: 404 DHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMV 463
Query: 159 VQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKN 218
V N++++ Y + KVD A V M ++
Sbjct: 464 VGNSLVDAY-------------------------------ASSRKVDYAWNVIRSMKRRD 492
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
+++T+++ + + + A + M + +R ++ +L +SA +G+L+ GK +H
Sbjct: 493 NITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHC 552
Query: 279 YAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEE 338
Y++K+G + +L+DMYSKCGSL+DA VF + ++ +WN +++ L +G
Sbjct: 553 YSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISS 612
Query: 339 ALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMV 398
AL F+EM PD+VTF+ +LSAC + + G YF +M + Y I P +EHYV +V
Sbjct: 613 ALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLV 672
Query: 399 ELYTGDSELDEVYTSEEAMSL 419
+ L+E E M L
Sbjct: 673 GILGRAGRLEEATGVVETMHL 693
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 158/338 (46%), Gaps = 32/338 (9%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSG 101
+H +I+ GL + L LL + A +FD+++ F W VMI T S
Sbjct: 44 HIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQ 103
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQN 161
AL LF+EM+ G P++FT+ V+++C +G VH IK F G++ V +
Sbjct: 104 EFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGS 163
Query: 162 TMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVS 221
++ + Y KCG ++ C E+F + + + +S
Sbjct: 164 SLSDLYSKCGQFKEAC-------------------------------ELFSSLQNADTIS 192
Query: 222 WTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAI 281
WT MI V ++ EA + M V PNEFT V L+ A + +G L+ GK IH I
Sbjct: 193 WTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNII 251
Query: 282 KNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALD 341
GI L L T+L+D YS+ ++DA V E+++ W ++++ + ++EA+
Sbjct: 252 VRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVG 311
Query: 342 LFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFS 379
F EM + P+ T+ +LS C + ++ G++ S
Sbjct: 312 TFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHS 349
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 194/435 (44%), Gaps = 56/435 (12%)
Query: 31 LENCCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS 87
+ +C + + +VHG +I++G + V+ L G+ A +F + D+
Sbjct: 131 VRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADT 190
Query: 88 FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASN--AFDFGRAVH 145
+W +MI + AL + EM+ G P++FT+ +K AS+ +FG+ +H
Sbjct: 191 ISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTF---VKLLGASSFLGLEFGKTIH 247
Query: 146 ALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVD 205
+ I + ++ ++++FY + ED +V + V WT++++
Sbjct: 248 SNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVS--------- 298
Query: 206 RAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACT 265
G+V+ R EA F M+ ++PN FT +++S C+
Sbjct: 299 ----------------------GFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCS 336
Query: 266 EMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLD-DAWIVFGIMTERNLATWN 324
+ SL GK IH IK G E +G AL+DMY KC + + +A VFG M N+ +W
Sbjct: 337 AVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWT 396
Query: 325 TMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEG-ERYFSLMTE 383
T+I L HG ++ L EM K V P+ VT GVL AC + V E + L+
Sbjct: 397 TLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRR 456
Query: 384 HYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNVVELLQESKLTSVDDIK 443
H ++ + +V+ Y ++D + + SMK N+ S +T +++
Sbjct: 457 HVDGEMVVGN--SLVDAYASSRKVDYAWN----VIRSMKRRDNIT---YTSLVTRFNELG 507
Query: 444 E------VINKHYGD 452
+ VIN YGD
Sbjct: 508 KHEMALSVINYMYGD 522
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 165/371 (44%), Gaps = 35/371 (9%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
K +H II G+ + VL L+ + KM A V + D F W ++ G +
Sbjct: 244 KTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRN 303
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
+ A+ F EM G P+ FTY ++ C A + DFG+ +H+ IK+ F T V
Sbjct: 304 LRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVG 363
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N +++ Y KC E V+ +R VF M S NVV
Sbjct: 364 NALVDMYMKCSASE-----------------------------VEASR-VFGAMVSPNVV 393
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
SWT +I G V + F L M V PN TL ++ AC+++ ++ IH Y
Sbjct: 394 SWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYL 453
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEAL 340
++ ++ +G +L+D Y+ +D AW V M R+ T+ +++T G E AL
Sbjct: 454 LRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMAL 513
Query: 341 DLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERY--FSLMTEHYGISPILEHYVCMV 398
+ M + D ++ G +SA ++ +E G+ +S+ + G + +L +V
Sbjct: 514 SVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLN---SLV 570
Query: 399 ELYTGDSELDE 409
++Y+ L++
Sbjct: 571 DMYSKCGSLED 581
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 144/337 (42%), Gaps = 53/337 (15%)
Query: 31 LENCCNFKQLKQV---HGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS 87
L C + +++V H ++R + + V+ L+ + K++YA V + D+
Sbjct: 434 LRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDN 493
Query: 88 FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHAL 147
T+ ++ G E AL + M G D+ + P I A A + G+ +H
Sbjct: 494 ITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCY 553
Query: 148 AIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRA 207
++K F G V N++++ Y KCG+ ED KVF+++ VVSW L++GL + G + A
Sbjct: 554 SVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSA 613
Query: 208 REVFDEM------PS---------------------------KNVVSWTAMIDGYV---- 230
F+EM P K + + ++ YV
Sbjct: 614 LSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVG 673
Query: 231 ---KCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIEL 287
+ R EA + E M + +PN +L+ AC G+L LG+ D A K G+ L
Sbjct: 674 ILGRAGRLEEATGVVETMHL---KPNAMIFKTLLRACRYRGNLSLGE---DMANK-GLAL 726
Query: 288 G---PFLGTALIDMYSKCGSLDDAWIVFGIMTERNLA 321
P L L D+Y + G + A +MTE+ L+
Sbjct: 727 APSDPALYILLADLYDESGKPELAQKTRNLMTEKRLS 763
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 251 RPNEF-----TLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSL 305
R NE + + ++S C E S ++G IH IK G+ L L+ +Y K +
Sbjct: 16 RTNELGNLQKSCIRILSFC-ESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGI 74
Query: 306 DDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSAC 365
+A +F M+ R + W MI++ AL LF+EM + P+ TF V+ +C
Sbjct: 75 WNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSC 134
Query: 366 VHMHDVEEGER 376
+ D+ G R
Sbjct: 135 AGLRDISYGGR 145
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 179/375 (47%), Gaps = 36/375 (9%)
Query: 28 LVTLENCCNFKQLKQVHGRIIRSGLT-HDQVLLRKLLQHSCAYGKMNYASLVFDQINAPD 86
L +L C + +Q+HG I SG++ ++ V+ ++ G +YA VF + D
Sbjct: 142 LASLVTCV--RHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRD 199
Query: 87 SFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHA 146
+WN +I C+ SG+ E AL F M PD++T V+ C G+ A
Sbjct: 200 VVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALA 259
Query: 147 LAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDR 206
L IKM F ++ V ++ + KC +D K+F ++ W +++
Sbjct: 260 LCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELE-----KWDSVLC---------- 304
Query: 207 AREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTE 266
+MI Y +A LF ++VRP++FT S++S+
Sbjct: 305 ----------------NSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA 348
Query: 267 MGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTM 326
+ L G +H IK G +L + T+L++MY K GS+D A VF ++L WNT+
Sbjct: 349 V-MLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTV 407
Query: 327 ITSLGVHGLSEEALDLFKEM-EKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHY 385
I L + + E+L +F ++ ++ PD VT +G+L AC + V EG + FS M + +
Sbjct: 408 IMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAH 467
Query: 386 GISPILEHYVCMVEL 400
G++P EHY C++EL
Sbjct: 468 GVNPGNEHYACIIEL 482
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 131/262 (50%), Gaps = 4/262 (1%)
Query: 120 PDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKV 179
P + ++ + S + + VHA ++ F TY N + YFK G+ + ++
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 180 FDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAF 239
FD + + ++W + GL G ++ A ++FDEMP ++VVSW MI G V C
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGI 121
Query: 240 DLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGI-ELGPFLGTALIDM 298
+F MQ +RP EFT L S T ++ G+ IH AI +G+ + +++DM
Sbjct: 122 RVFFDMQRWEIRPTEFTFSILASLVT---CVRHGEQIHGNAICSGVSRYNLVVWNSVMDM 178
Query: 299 YSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTF 358
Y + G D A VF M +R++ +WN +I S G E ALD F M + + PD T
Sbjct: 179 YRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTV 238
Query: 359 VGVLSACVHMHDVEEGERYFSL 380
V+S C + ++ +G++ +L
Sbjct: 239 SMVVSICSDLRELSKGKQALAL 260
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 148/329 (44%), Gaps = 12/329 (3%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLS 100
K VH +++ +G + LQ G + A +FD I ++ TWNV ++G +
Sbjct: 24 KIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKN 83
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFW--GDTY 158
G +AL LF EM + D ++ +I ++ ++G V M+ W T
Sbjct: 84 GYLNNALDLFDEMPER----DVVSWNTMISGLVSCGFHEYGIRVF---FDMQRWEIRPTE 136
Query: 159 VQNTMMNFYFKC---GNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMP 215
+++ C G + G + + ++V W +++ G D A VF M
Sbjct: 137 FTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTME 196
Query: 216 SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKW 275
++VVSW +I A D F M+ ++P+E+T+ +VS C+++ L GK
Sbjct: 197 DRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQ 256
Query: 276 IHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGL 335
IK G + A IDM+SKC LDD+ +F + + + N+MI S H
Sbjct: 257 ALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCC 316
Query: 336 SEEALDLFKEMEKANVVPDAVTFVGVLSA 364
E+AL LF +V PD TF VLS+
Sbjct: 317 GEDALRLFILAMTQSVRPDKFTFSSVLSS 345
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 37/280 (13%)
Query: 34 CCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTW 90
C + ++L KQ I+ G + ++L + +++ + +F ++ DS
Sbjct: 245 CSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLC 304
Query: 91 NVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIK 150
N MI + E AL LF + + PDKFT+ V+ + + + D G VH+L IK
Sbjct: 305 NSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADVHSLVIK 363
Query: 151 MRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREV 210
+ F DT V ++M YFK G+ + VF K G ++ W T+I GL
Sbjct: 364 LGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGL------------ 411
Query: 211 FDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQI-ENVRPNEFTLVSLVSACTEMGS 269
+ R VE+ +F + + ++++P+ TL+ ++ AC G
Sbjct: 412 -------------------ARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGF 452
Query: 270 LKLGKWIHDYAIK-NGIELGPFLGTALIDMYSKCGSLDDA 308
+ G I K +G+ G +I++ + G +++A
Sbjct: 453 VNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEA 492
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 156/366 (42%), Gaps = 69/366 (18%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSG 101
QVH I++SG + + L+ +M A + + + D +WN MI GC G
Sbjct: 248 QVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQG 307
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKA-CIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
AL +F M + D FT P ++ ++ + H L +K + V
Sbjct: 308 LIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVN 367
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N +++ Y K G +D A +VF+ M K+V+
Sbjct: 368 NALVDMYAKRG-------------------------------IMDSALKVFEGMIEKDVI 396
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
SWTA++ G EA LF M++ + P++ S++SA E+ L+ G+ +H
Sbjct: 397 SWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNY 456
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEAL 340
IK+G + +L+ MY+KCGSL+DA ++F M R+L TW +I +GL E+A
Sbjct: 457 IKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDA- 515
Query: 341 DLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVEL 400
+RYF M YGI+P EHY CM++L
Sbjct: 516 ----------------------------------QRYFDSMRTVYGITPGPEHYACMIDL 541
Query: 401 Y--TGD 404
+ +GD
Sbjct: 542 FGRSGD 547
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 162/341 (47%), Gaps = 39/341 (11%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA-PDSFTWNVMIRGCTL 99
+Q+HG I++G D ++ LL +++ A +F+ + ++ TW M+ G +
Sbjct: 145 EQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQ 204
Query: 100 SGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYV 159
+G A+ F+++ +G +++T+P V+ AC + +A G VH +K F + YV
Sbjct: 205 NGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYV 264
Query: 160 QNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNV 219
Q+ +++ Y KC E AR + + M +V
Sbjct: 265 QSALIDMYAKCREMES-------------------------------ARALLEGMEVDDV 293
Query: 220 VSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVS----ACTEMGSLKLGKW 275
VSW +MI G V+ EA +F M +++ ++FT+ S+++ + TEM K+
Sbjct: 294 VSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEM---KIASS 350
Query: 276 IHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGL 335
H +K G + AL+DMY+K G +D A VF M E+++ +W ++T +G
Sbjct: 351 AHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGS 410
Query: 336 SEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
+EAL LF M + PD + VLSA + +E G++
Sbjct: 411 YDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQ 451
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 122/227 (53%), Gaps = 6/227 (2%)
Query: 140 FGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLI 199
FG +H+ A + + N ++ K G ++ ++FDKM +W T+I
Sbjct: 16 FGSCIHSYADRTKLH-----SNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYS 70
Query: 200 ACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVS 259
++ A ++F P KN +SW A+I GY K VEAF+LF MQ + ++PNE+TL S
Sbjct: 71 NSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGS 130
Query: 260 LVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT-ER 318
++ CT + L G+ IH + IK G +L + L+ MY++C + +A +F M E+
Sbjct: 131 VLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEK 190
Query: 319 NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSAC 365
N TW +M+T +G + +A++ F+++ + + TF VL+AC
Sbjct: 191 NNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTAC 237
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 136/293 (46%), Gaps = 30/293 (10%)
Query: 71 KMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIK 130
+++ A +F ++ +WN +I G SGS A LF EM G P+++T V++
Sbjct: 74 RLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLR 133
Query: 131 ACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVS 190
C + G +H IK F D V N ++ Y +C + +F+ M G
Sbjct: 134 MCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEG----- 188
Query: 191 WTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENV 250
KN V+WT+M+ GY + +A + F ++ E
Sbjct: 189 -------------------------EKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGN 223
Query: 251 RPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWI 310
+ N++T S+++AC + + ++G +H +K+G + ++ +ALIDMY+KC ++ A
Sbjct: 224 QSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARA 283
Query: 311 VFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLS 363
+ M ++ +WN+MI GL EAL +F M + ++ D T +L+
Sbjct: 284 LLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILN 336
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 137/293 (46%), Gaps = 15/293 (5%)
Query: 37 FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRG 96
K H I+++G +++ L+ G M+ A VF+ + D +W ++ G
Sbjct: 345 MKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTG 404
Query: 97 CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGD 156
T +GS + AL LF M + G PDK V+ A +FG+ VH IK F
Sbjct: 405 NTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSS 464
Query: 157 TYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPS 216
V N+++ Y KCG+ ED +F+ M +++WT LI G G ++ A+ FD M +
Sbjct: 465 LSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRT 524
Query: 217 KNVVS-----WTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLK 271
++ + MID + + V+ L M++E P+ ++++A + G+++
Sbjct: 525 VYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVE---PDATVWKAILAASRKHGNIE 581
Query: 272 LGKWIHDYAIKNGIELGPFLGTA---LIDMYSKCGSLDDAWIVFGIMTERNLA 321
G + A K +EL P L +MYS G D+A V +M RN++
Sbjct: 582 NG----ERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNIS 630
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 149/318 (46%), Gaps = 34/318 (10%)
Query: 94 IRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRF 153
++G ++G + A+ L + G + TY +++ C + G+ +HA + F
Sbjct: 83 LKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGF 139
Query: 154 WGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDE 213
+ Y++ ++ Y G+ + AG++ F
Sbjct: 140 ALNEYLKVKLLILYALSGDLQ--------------------TAGIL-----------FRS 168
Query: 214 MPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG 273
+ ++++ W AMI GYV+ E ++ M+ + P+++T S+ AC+ + L+ G
Sbjct: 169 LKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHG 228
Query: 274 KWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVH 333
K H IK I+ + +AL+DMY KC S D VF ++ RN+ TW ++I+ G H
Sbjct: 229 KRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYH 288
Query: 334 GLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEH 393
G E L F++M++ P+ VTF+ VL+AC H V++G +F M YGI P +H
Sbjct: 289 GKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQH 348
Query: 394 YVCMVELYTGDSELDEVY 411
Y MV+ L E Y
Sbjct: 349 YAAMVDTLGRAGRLQEAY 366
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 154/346 (44%), Gaps = 42/346 (12%)
Query: 29 VTLENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAP 85
V L+ C K+ K++H ++ G ++ L KLL G + A ++F +
Sbjct: 113 VLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIR 172
Query: 86 DSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVH 145
D WN MI G G + L ++ +M PD++T+ V +AC A + + G+ H
Sbjct: 173 DLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAH 232
Query: 146 ALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVD 205
A+ IK + V + +++ YFKC + DG
Sbjct: 233 AVMIKRCIKSNIIVDSALVDMYFKCSSFSDG----------------------------- 263
Query: 206 RAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACT 265
VFD++ ++NV++WT++I GY + E FE M+ E RPN T + +++AC
Sbjct: 264 --HRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACN 321
Query: 266 EMGSLKLGKWIHDYAIKN--GIELGPFLGTALIDMYSKCGSLDDAW-IVFGIMTERNLAT 322
G + G W H Y++K GIE A++D + G L +A+ V + +
Sbjct: 322 HGGLVDKG-WEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPV 380
Query: 323 WNTMITSLGVHG---LSEEALDLFKEMEKANVVPDAVTFVGVLSAC 365
W +++ + +HG L E A F E++ N + V F ++C
Sbjct: 381 WGSLLGACRIHGNVKLLELAATKFLELDPTN-GGNYVVFANGYASC 425
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 167/362 (46%), Gaps = 38/362 (10%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMN---YASLVFDQINAPDSFTWNVMIRGCT 98
++H +I+ G + + L+ Y K N Y F +++ D +W +I G
Sbjct: 407 ELHAYVIKHGWDSNLQVGNTLID---MYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYA 463
Query: 99 LSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTY 158
+ AL LF+++ K D+ +++A + + +H ++ DT
Sbjct: 464 QNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTV 522
Query: 159 VQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKN 218
+QN +++ Y KC N +VF+ ++G K+
Sbjct: 523 IQNELVDVYGKCRNMGYATRVFESIKG-------------------------------KD 551
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
VVSWT+MI EA +LF M + + L+ ++SA + +L G+ IH
Sbjct: 552 VVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHC 611
Query: 279 YAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEE 338
Y ++ G L + A++DMY+ CG L A VF + + L + +MI + G+HG +
Sbjct: 612 YLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKA 671
Query: 339 ALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMV 398
A++LF +M NV PD ++F+ +L AC H ++EG + +M Y + P EHYVC+V
Sbjct: 672 AVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLV 731
Query: 399 EL 400
++
Sbjct: 732 DM 733
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 170/380 (44%), Gaps = 42/380 (11%)
Query: 11 NVPHFNTPTTRFDSQQALVTLENCCNFK---QLKQVHGRIIRSGLTHD-QVLLRKLLQHS 66
+V N+P F LE C + Q +Q+H RI ++ + + L KL+
Sbjct: 72 DVSENNSPVEAF-----AYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMY 126
Query: 67 CAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYP 126
G ++ A VFD++ +F WN MI +G P AL L+ M ++G ++P
Sbjct: 127 GKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFP 186
Query: 127 FVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGC 186
++KAC G +H+L +K+ + ++ N +++ Y K N++
Sbjct: 187 ALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAK--NDD------------ 232
Query: 187 SVVSWTTLIAGLIACGKVDRAREVFDEMPSK-NVVSWTAMIDGYVKCQRPVEAFDLFEGM 245
+ AR +FD K + V W +++ Y + +E +LF M
Sbjct: 233 -----------------LSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREM 275
Query: 246 QIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGP-FLGTALIDMYSKCGS 304
+ PN +T+VS ++AC KLGK IH +K+ ++ ALI MY++CG
Sbjct: 276 HMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGK 335
Query: 305 LDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSA 364
+ A + M ++ TWN++I + + +EAL+ F +M A D V+ +++A
Sbjct: 336 MPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Query: 365 CVHMHDVEEGERYFSLMTEH 384
+ ++ G + + +H
Sbjct: 396 SGRLSNLLAGMELHAYVIKH 415
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 161/351 (45%), Gaps = 40/351 (11%)
Query: 14 HFNTPTTRFDSQQALVTLENCCNF---KQLKQVHGRIIRSGLTHDQVLL--RKLLQHSCA 68
H P +S + L C F K K++H +++S TH L L+
Sbjct: 276 HMTGPAP--NSYTIVSALTACDGFSYAKLGKEIHASVLKSS-THSSELYVCNALIAMYTR 332
Query: 69 YGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFV 128
GKM A + Q+N D TWN +I+G + + AL F +M+ G D+ + +
Sbjct: 333 CGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSI 392
Query: 129 IKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSV 188
I A + G +HA IK + + V NT+++ Y KC
Sbjct: 393 IAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCN----------------- 435
Query: 189 VSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE 248
+ C + RA F M K+++SWT +I GY + VEA +LF + +
Sbjct: 436 ----------LTC-YMGRA---FLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481
Query: 249 NVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDA 308
+ +E L S++ A + + S+ + K IH + ++ G+ L + L+D+Y KC ++ A
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYA 540
Query: 309 WIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFV 359
VF + +++ +W +MI+S ++G EA++LF+ M + + D+V +
Sbjct: 541 TRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALL 591
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 161/368 (43%), Gaps = 60/368 (16%)
Query: 40 LKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGK---MNYASLVFDQINAPDSFTWNVMIRG 96
+K++H I+R GL D V+ +L+ YGK M YA+ VF+ I D +W MI
Sbjct: 506 VKEIHCHILRKGLL-DTVIQNELVD---VYGKCRNMGYATRVFESIKGKDVVSWTSMISS 561
Query: 97 CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGD 156
L+G+ A+ LF+ M+ G + D ++ A + +A + GR +H ++ F +
Sbjct: 562 SALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLE 621
Query: 157 TYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIA--GLIACGKVDRAREVFDEM 214
+ +++ Y CG+ + VFD++ ++ +T++I G+ CGK A E+FD+M
Sbjct: 622 GSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKA--AVELFDKM 679
Query: 215 PSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGK 274
+ ENV P+ + ++L+ AC+ G L G+
Sbjct: 680 -------------------------------RHENVSPDHISFLALLYACSHAGLLDEGR 708
Query: 275 WI-----HDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM-TERNLATWNTMIT 328
H+Y +E P L+DM + + +A+ +M TE W ++
Sbjct: 709 GFLKIMEHEYE----LEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLA 764
Query: 329 SLGVHG---LSEEALDLFKEMEKANVVPDAVTFVG-VLSACVHMHDVEE--GERYFSLMT 382
+ H + E A E+E N P + V V + +DVE+ + S M
Sbjct: 765 ACRSHSEKEIGEIAAQRLLELEPKN--PGNLVLVSNVFAEQGRWNDVEKVRAKMKASGME 822
Query: 383 EHYGISPI 390
+H G S I
Sbjct: 823 KHPGCSWI 830
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 164/334 (49%), Gaps = 14/334 (4%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASL-----VFDQINAPDSFTWNVMIRG 96
Q+HG I++SG + + L+ Y K + +S +FD+I D +WN ++
Sbjct: 202 QIHGLIVKSGFLNSVFVSNSLMS---LYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSS 258
Query: 97 CTLSGSPEHALVLFKEM-LLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWG 155
G A LF EM ++GF D FT ++ +C S+ GR +H AI++
Sbjct: 259 LVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQ 318
Query: 156 DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMP 215
+ V N ++ FY K + + +++ M V++T +I ++ G VD A E+F +
Sbjct: 319 ELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVT 378
Query: 216 SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKW 275
KN +++ A++ G+ + ++A LF M V +F+L S V AC + K+ +
Sbjct: 379 EKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQ 438
Query: 276 IHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVH-- 333
IH + IK G P + TAL+DM ++C + DA +F NL + + +G +
Sbjct: 439 IHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFD-QWPSNLDSSKATTSIIGGYAR 497
Query: 334 -GLSEEALDLF-KEMEKANVVPDAVTFVGVLSAC 365
GL ++A+ LF + + + + D V+ +L+ C
Sbjct: 498 NGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVC 531
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 154/354 (43%), Gaps = 36/354 (10%)
Query: 52 LTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFK 111
+ D V +++ ++G ++ A +F + ++ T+N ++ G +G AL LF
Sbjct: 347 MAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFT 406
Query: 112 EMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCG 171
+ML +G F+ + AC + +H IK + +Q +++ +C
Sbjct: 407 DMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCE 466
Query: 172 NEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK--NVVSWTAMIDGY 229
D A E+FD+ PS + + T++I GY
Sbjct: 467 RMAD-------------------------------AEEMFDQWPSNLDSSKATTSIIGGY 495
Query: 230 VKCQRPVEAFDLFEGMQIEN-VRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELG 288
+ P +A LF E + +E +L +++ C +G ++G IH YA+K G
Sbjct: 496 ARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSD 555
Query: 289 PFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEK 348
LG +LI MY+KC DDA +F M E ++ +WN++I+ + +EAL L+ M +
Sbjct: 556 ISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNE 615
Query: 349 ANVVPDAVTFVGVLSACVHM--HDVEEGERYFSLMTEHYGISPILEHYVCMVEL 400
+ PD +T V+SA + + + F M Y I P EHY V +
Sbjct: 616 KEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRV 669
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 133/281 (47%), Gaps = 33/281 (11%)
Query: 75 ASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFA-PDKFTYPFVIKACI 133
A LVF +++P ++ +I G + AL +F M G P+++T+ ++ AC+
Sbjct: 133 AILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACV 192
Query: 134 ASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNE--EDGCKVFDKMRGCSVVSW 191
+ F G +H L +K F +V N++M+ Y K +D K+FD++ V SW
Sbjct: 193 RVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASW 252
Query: 192 TTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVR 251
T+++ L+ GK +A ++F EM VE F +
Sbjct: 253 NTVVSSLVKEGKSHKAFDLFYEM-------------------NRVEGFGV---------- 283
Query: 252 PNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIV 311
+ FTL +L+S+CT+ L G+ +H AI+ G+ + ALI YSK + +
Sbjct: 284 -DSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESL 342
Query: 312 FGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVV 352
+ +M ++ T+ MIT+ G+ + A+++F + + N +
Sbjct: 343 YEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTI 383
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 180 FDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAF 239
F K+R LI+ + G A VF + S VVS+TA+I G+ + +EA
Sbjct: 106 FLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEAL 165
Query: 240 DLFEGMQIEN-VRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDM 298
+F M+ V+PNE+T V++++AC + LG IH +K+G F+ +L+ +
Sbjct: 166 KVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSL 225
Query: 299 YSK--CGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVP-DA 355
Y K S DD +F + +R++A+WNT+++SL G S +A DLF EM + D+
Sbjct: 226 YDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDS 285
Query: 356 VTFVGVLSAC 365
T +LS+C
Sbjct: 286 FTLSTLLSSC 295
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%), Gaps = 10/223 (4%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQ--INAPDSFTWNVMIRGCT 98
+Q+HG I+ G + + LL +M A +FDQ N S +I G
Sbjct: 437 EQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYA 496
Query: 99 LSGSPEHALVLFKEMLL-KGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDT 157
+G P+ A+ LF L + D+ + ++ C + G +H A+K ++ D
Sbjct: 497 RNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDI 556
Query: 158 YVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK 217
+ N++++ Y KC + +D K+F+ MR V+SW +LI+ I D A ++ M K
Sbjct: 557 SLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEK 616
Query: 218 ----NVVSWTAMIDG--YVKCQRPVEAFDLFEGMQ-IENVRPN 253
++++ T +I Y + + DLF M+ I ++ P
Sbjct: 617 EIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPT 659
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 239 FDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDM 298
FD E IE+V F L+ L + + +++ K +H +K E LG ALI
Sbjct: 68 FDKEETEDIESVIDGFFYLLRLSA---QYHDVEVTKAVHASFLKLR-EEKTRLGNALIST 123
Query: 299 YSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVV-PDAVT 357
Y K G +A +VF ++ + ++ +I+ L EAL +F M KA +V P+ T
Sbjct: 124 YLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYT 183
Query: 358 FVGVLSACVHMHDVEEGERYFSLMTE 383
FV +L+ACV + G + L+ +
Sbjct: 184 FVAILTACVRVSRFSLGIQIHGLIVK 209
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 171/399 (42%), Gaps = 44/399 (11%)
Query: 22 FDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQH--SCAYGKMNY-ASLV 78
F ++ L ++ C ++ KQVHG ++ GL + ++ C G Y A V
Sbjct: 158 FPNEFTLSSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTV 217
Query: 79 FDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAF 138
F+ I + TWN MI + A+ +F M G D+ T + + S+
Sbjct: 218 FEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDL 277
Query: 139 DFGRA------VHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGC-KVFDKMRGCSVVSW 191
+H+L +K T V ++ Y + + C K+F +M C
Sbjct: 278 VPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHC----- 332
Query: 192 TTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVR 251
+++V+W +I + P A LF ++ E +
Sbjct: 333 -------------------------RDIVAWNGIITAFA-VYDPERAIHLFGQLRQEKLS 366
Query: 252 PNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIV 311
P+ +T S++ AC + + + IH IK G L +LI Y+KCGSLD V
Sbjct: 367 PDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRV 426
Query: 312 FGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDV 371
F M R++ +WN+M+ + +HG + L +F++M+ + PD+ TF+ +LSAC H V
Sbjct: 427 FDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDSATFIALLSACSHAGRV 483
Query: 372 EEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEV 410
EEG R F M E P L HY C++++ + E
Sbjct: 484 EEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEA 522
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 139/283 (49%), Gaps = 17/283 (6%)
Query: 194 LIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPN 253
LI CG + AR+VFD MP +NVVSWTA+I GYV+ E F LF M + + PN
Sbjct: 102 LINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM-LSHCFPN 160
Query: 254 EFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKC---GSLDDAWI 310
EFTL S++++C + GK +H A+K G+ ++ A+I MY +C + +AW
Sbjct: 161 EFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWT 216
Query: 311 VFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHD 370
VF + +NL TWN+MI + L ++A+ +F M V D T + + S+ D
Sbjct: 217 VFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSD 276
Query: 371 VEEGE-----RYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQ 425
+ E +T G+ E ++++Y SE+ E YT + + M +
Sbjct: 277 LVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVY---SEMLEDYTDCYKLFMEMSHCR 333
Query: 426 NVVELLQESKLTSVDDIKEVINKHYGDLNFSKLDLDHSSVSSV 468
++V +V D + I+ +G L KL D + SSV
Sbjct: 334 DIVAWNGIITAFAVYDPERAIHL-FGQLRQEKLSPDWYTFSSV 375
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 162/369 (43%), Gaps = 48/369 (13%)
Query: 12 VPHFNTPTTRFDSQQALVTLENCC----NFKQLKQVHGRIIRSGLTHDQ--VLLRKLLQH 65
V F + SQQA L C N +H ++ + Q +L L+
Sbjct: 46 VSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINM 105
Query: 66 SCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTY 125
G + YA VFD + + +W +I G +G+ + LF ML F P++FT
Sbjct: 106 YAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTL 164
Query: 126 PFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRG 185
V+ +C ++ G+ VH LA+K+ YV N +++ Y +C DG ++
Sbjct: 165 SSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRC---HDGAAAYE---- 213
Query: 186 CSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGM 245
+WT VF+ + KN+V+W +MI + C +A +F M
Sbjct: 214 ----AWT-----------------VFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRM 252
Query: 246 QIENVRPNEFTLVSLVSACTEMGSL------KLGKWIHDYAIKNGIELGPFLGTALIDMY 299
+ V + TL+++ S+ + L K +H +K+G+ + TALI +Y
Sbjct: 253 HSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVY 312
Query: 300 SK-CGSLDDAWIVFGIMTE-RNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVT 357
S+ D + +F M+ R++ WN +IT+ V+ E A+ LF ++ + + PD T
Sbjct: 313 SEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYT 371
Query: 358 FVGVLSACV 366
F VL AC
Sbjct: 372 FSSVLKACA 380
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 165/364 (45%), Gaps = 35/364 (9%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLL-QHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTL 99
KQ+H +++SG + + +L + A G ++ + F+ + D +WN ++ C
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCAD 292
Query: 100 SGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRF-WGDTY 158
GS +L LF +M G P + + C ++ G+ +H +KM F +
Sbjct: 293 YGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLH 352
Query: 159 VQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKN 218
VQ+ +++ Y KC E+ ++ + ++ +L+ L+ CG E+F
Sbjct: 353 VQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFG------ 406
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEM--GSLKLGKWI 276
MID EG I+ E TL +++ A + SL +
Sbjct: 407 -----LMID---------------EGTGID-----EVTLSTVLKALSLSLPESLHSCTLV 441
Query: 277 HDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLS 336
H AIK+G + +LID Y+K G + + VF + N+ ++I +G+
Sbjct: 442 HCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMG 501
Query: 337 EEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVC 396
+ + + +EM++ N++PD VT + VLS C H VEEGE F + YGISP + Y C
Sbjct: 502 TDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYAC 561
Query: 397 MVEL 400
MV+L
Sbjct: 562 MVDL 565
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 138/309 (44%), Gaps = 34/309 (11%)
Query: 70 GKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVI 129
G + A FD+++ D T+N++I G + G A+ L+ EM+ G T+P V+
Sbjct: 60 GNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVL 119
Query: 130 KACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV 189
C G VH I + F GC +F +
Sbjct: 120 SVCSDELFCREGIQVHCRVISLGF----------------------GCNMFVR------- 150
Query: 190 SWTTLIAGLIACGK-VDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIE 248
+ + GL AC + VD A ++FDEM +N+ ++ + + F+++ M++E
Sbjct: 151 ---SALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELE 207
Query: 249 NVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGP-FLGTALIDMYSKCGSLDD 307
V N T ++ C+ + GK +H +K+G + F+ L+D YS CG L
Sbjct: 208 GVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSG 267
Query: 308 AWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVH 367
+ F + E+++ +WN++++ +G ++LDLF +M+ P F+ L+ C
Sbjct: 268 SMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSR 327
Query: 368 MHDVEEGER 376
D++ G++
Sbjct: 328 NSDIQSGKQ 336
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 150/325 (46%), Gaps = 33/325 (10%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSG 101
QVH R+I G + + L+ ++ A +FD++ + N+++R +G
Sbjct: 133 QVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTG 192
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRF-WGDTYVQ 160
+ ++ M L+G A + TY ++I+ C G+ +H+L +K + + +V
Sbjct: 193 ESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVA 252
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
N ++++Y CG+ + F+ +P K+V+
Sbjct: 253 NVLVDYYSACGDLSGSMRSFNA-------------------------------VPEKDVI 281
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
SW +++ +++ DLF MQ RP+ +S ++ C+ ++ GK IH Y
Sbjct: 282 SWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYV 341
Query: 281 IKNGIELGPF-LGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEA 339
+K G ++ + +ALIDMY KC ++++ +++ + NL N+++TSL G++++
Sbjct: 342 LKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDI 401
Query: 340 LDLFKEMEKANVVPDAVTFVGVLSA 364
+++F M D VT VL A
Sbjct: 402 IEMFGLMIDEGTGIDEVTLSTVLKA 426
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 2/211 (0%)
Query: 198 LIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTL 257
LI G + A E FDEM ++VV++ +I G + + A +L+ M +R + T
Sbjct: 56 LIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTF 115
Query: 258 VSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTE 317
S++S C++ + G +H I G F+ +AL+ +Y+ +D A +F M +
Sbjct: 116 PSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLD 175
Query: 318 RNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERY 377
RNLA N ++ G S+ +++ ME V + +T+ ++ C H V EG++
Sbjct: 176 RNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQL 235
Query: 378 FSLMTEH-YGISPILEHYVCMVELYTGDSEL 407
SL+ + + IS I V +V+ Y+ +L
Sbjct: 236 HSLVVKSGWNISNIFVANV-LVDYYSACGDL 265
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 177/393 (45%), Gaps = 33/393 (8%)
Query: 33 NC-CNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQI----NA 84
NC C K+L V GR + G D + L+ C G+++ A + D++
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTY-PFVIKACIASN---AFDF 140
PD T + +I G L G ALVL M+ GF PD+ TY P + + C + N A D
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 141 GRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMR----GCSVVSWTTLIA 196
R + IK + V +++ K G+ +D +F++M VV++++LI
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLC----KDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 197 GLIACGKVDRAREVFDEMPSKN----VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRP 252
GL GK D ++ EM +N VV+++A+ID +VK + +EA +L+ M + P
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 253 NEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVF 312
+ T SL+ + L + D + G E + LI+ Y K +DD +F
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 313 GIMTER----NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHM 368
++ + N T+NT++ G A +LF+EM V P VT+ +L
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Query: 369 HDVEEGERYF-----SLMTEHYGISPILEHYVC 396
++ + F S MT GI I+ H +C
Sbjct: 469 GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 176/413 (42%), Gaps = 24/413 (5%)
Query: 46 RIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPD----SFTWNVMIRGCTLSG 101
R++ G D+V +L C G A +F ++ + ++++I G
Sbjct: 200 RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDG 259
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQN 161
S + AL LF EM +KG D TY +I +D G + I D +
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFS 319
Query: 162 TMMNFYFKCGNEEDGCKVFDKM--RGCS--VVSWTTLIAGLIACGKVDRAREVFDEMPSK 217
+++ + K G + +++++M RG + +++ +LI G + A ++FD M SK
Sbjct: 320 ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 379
Query: 218 ----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG 273
++V+++ +I+ Y K +R + LF + + + PN T +LV + G L
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439
Query: 274 KWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVH 333
K + + G+ L+D G L+ A +F M +++ T I ++ +H
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM-QKSRMTLGIGIYNIIIH 498
Query: 334 GLS-----EEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGIS 388
G+ ++A LF + V PD VT+ ++ + E + F M E G +
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED-GCT 557
Query: 389 PILEHYVCMVELYTGDSEL-DEVYTSEE----AMSLSMKTNQNVVELLQESKL 436
P Y ++ + G S L V EE S T + V+++L + +L
Sbjct: 558 PDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRL 610
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 173/393 (44%), Gaps = 33/393 (8%)
Query: 33 NC-CNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQI----NA 84
NC C ++L G+I++ G D V+ LL C +++ A + D++ +
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASN----AFDF 140
P T N ++ G L+G A+VL M+ GF P++ TY V+ S A +
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 141 GRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMR----GCSVVSWTTLIA 196
R + IK+ D + +++ K G+ ++ +F++M ++++ TLI
Sbjct: 251 LRKMEERNIKL----DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 197 GLIACGKVDRAREVFDEMP----SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRP 252
G G+ D ++ +M S NVV+++ +ID +VK + EA L + M + P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 253 NEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVF 312
N T SL+ + L+ + D I G + LI+ Y K +DD +F
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 313 GIMTER----NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHM 368
M+ R N T+NT++ G E A LF+EM V PD V++ +L
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 369 HDVEEGERYF-----SLMTEHYGISPILEHYVC 396
++E+ F S M GI I+ H +C
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 165/378 (43%), Gaps = 57/378 (15%)
Query: 46 RIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAP----DSFTWNVMIRGCTLSG 101
R++ +G ++V +L C G+ A + ++ D+ ++++I G G
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQN 161
S ++A LF EM +KGF D TY +I + +D G + IK + + +
Sbjct: 278 SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFS 337
Query: 162 TMMNFYFKCGNEEDGCKVFDKM--RGCS--VVSWTTLIAGLIACGKVDRAREVFDEMPSK 217
+++ + K G + ++ +M RG + +++ +LI G +++ A ++ D M SK
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Query: 218 ----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG 273
+++++ +I+GY K R + +LF M + V N T +LV + G L++
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 274 KW-------------IHDYAI----------------------KNGIELGPFLGTALIDM 298
K I Y I K+ +EL +G +I +
Sbjct: 458 KKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD--IGIYMIII 515
Query: 299 YSKCGS--LDDAWIVFGIMTERNLA----TWNTMITSLGVHGLSEEALDLFKEMEKANVV 352
+ C + +DDAW +F + + + +N MI+ L +A LF++M +
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA 575
Query: 353 PDAVTFVGVLSACVHMHD 370
PD +T+ ++ A H+ D
Sbjct: 576 PDELTYNILIRA--HLGD 591
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 143/353 (40%), Gaps = 25/353 (7%)
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAV 144
P +N + + E L L K+M KG A +T +I + +
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 145 HALAIKMRFWGDTYVQNTMMN-FYFKCGNEEDGCKVFDKM----RGCSVVSWTTLIAGLI 199
+K+ + DT + NT++N +C E ++ D+M ++++ TL+ GL
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSE-ALELVDRMVEMGHKPTLITLNTLVNGLC 204
Query: 200 ACGKVDRAREVFDEMP----SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEF 255
GKV A + D M N V++ +++ K + A +L M+ N++ +
Sbjct: 205 LNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 256 TLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLG-----TALIDMYSKCGSLDDAWI 310
++ + GSL + + + N +E+ F LI + G DD
Sbjct: 265 KYSIIIDGLCKDGSLD-----NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK 319
Query: 311 VFGIMTER----NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACV 366
+ M +R N+ T++ +I S G EA L KEM + + P+ +T+ ++
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379
Query: 367 HMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
+ +EE + LM G P + + ++ Y + +D+ MSL
Sbjct: 380 KENRLEEAIQMVDLMISK-GCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 179/398 (44%), Gaps = 36/398 (9%)
Query: 29 VTLENCCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQI--- 82
+ + CC ++L G+II+ G D V L+ C G+++ A + D++
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 83 -NAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASN----A 137
+ P T N ++ G L+G A++L M+ GF P++ TY V+K S A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 138 FDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMR----GCSVVSWTT 193
+ R + IK+ D + +++ K G+ ++ +F++M ++ +TT
Sbjct: 232 MELLRKMEERKIKL----DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 194 LIAGLIACGKVDRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN 249
LI G G+ D ++ +M + +VV+++A+ID +VK + EA +L + M
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 250 VRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGT--ALIDMYSKCGSLDD 307
+ P+ T SL+ + L + D + G GP + T LI+ Y K +DD
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC--GPNIRTFNILINGYCKANLIDD 405
Query: 308 AWIVFGIMTERNL----ATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLS 363
+F M+ R + T+NT+I G E A +LF+EM V PD V++ +L
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 364 ACVHMHDVEEGERYF-----SLMTEHYGISPILEHYVC 396
+ E+ F S M GI I+ H +C
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 180/412 (43%), Gaps = 22/412 (5%)
Query: 46 RIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAP----DSFTWNVMIRGCTLSG 101
R++ +G ++V +L+ C G+ A + ++ D+ ++++I G G
Sbjct: 202 RMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQN 161
S ++A LF EM +KGF D Y +I+ + +D G + IK + D +
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS 321
Query: 162 TMMNFYFKCGNEEDGCKVFDKM--RGCS--VVSWTTLIAGLIACGKVDRAREVFDEMPSK 217
+++ + K G + ++ +M RG S V++T+LI G ++D+A + D M SK
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 218 ----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG 273
N+ ++ +I+GY K + +LF M + V + T +L+ E+G L++
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Query: 274 KWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM----TERNLATWNTMITS 329
K + + + L+D G + A +F + E ++ +N +I
Sbjct: 442 KELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHG 501
Query: 330 LGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISP 389
+ ++A DLF + V PD T+ ++ + E + F M E G SP
Sbjct: 502 MCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED-GHSP 560
Query: 390 ILEHYVCMVELYTGDSELDEVYTSEEAM-----SLSMKTNQNVVELLQESKL 436
Y ++ + G+ + + E + S+ T + VV++L + +L
Sbjct: 561 NGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRL 612
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 126/312 (40%), Gaps = 40/312 (12%)
Query: 106 ALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMN 165
L L K+M LKG A + +T +I C + IK+ + DT
Sbjct: 91 VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDT-------- 142
Query: 166 FYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMP----SKNVVS 221
V+++TLI GL G+V A E+ D M +++
Sbjct: 143 -----------------------VTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLIT 179
Query: 222 WTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAI 281
A+++G + +A L + M +PNE T ++ + G L +
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239
Query: 282 KNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT----ERNLATWNTMITSLGVHGLSE 337
+ I+L + +ID K GSLD+A+ +F M + ++ + T+I G +
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD 299
Query: 338 EALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCM 397
+ L ++M K + PD V F ++ V + E E M + GISP Y +
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR-GISPDTVTYTSL 358
Query: 398 VELYTGDSELDE 409
++ + +++LD+
Sbjct: 359 IDGFCKENQLDK 370
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 155/394 (39%), Gaps = 54/394 (13%)
Query: 84 APDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKA-CI---ASNAFD 139
A + +T ++MI C A +++ G+ PD T+ +I C+ S A +
Sbjct: 104 AHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALE 163
Query: 140 F--------------------------GRAVHALAIKMR-----FWGDTYVQNTMMNFYF 168
G+ A+ + R F + ++
Sbjct: 164 LVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMC 223
Query: 169 KCGNEEDGCKVFDKMRGCSV----VSWTTLIAGLIACGKVDRAREVFDEMPSK----NVV 220
K G ++ KM + V ++ +I GL G +D A +F+EM K +++
Sbjct: 224 KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 283
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
+T +I G+ R + L M + P+ +L+ + G L+ + +H
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTMITSLGVHGLS 336
I+ GI T+LID + K LD A + +M + N+ T+N +I L
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLI 403
Query: 337 EEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVC 396
++ L+LF++M VV D VT+ ++ + +E + F M + P + Y
Sbjct: 404 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR-VRPDIVSYKI 462
Query: 397 MVELYTGDSELDEVYTSEEAMSLSMKTNQNVVEL 430
+++ + E E+A+ + K ++ +EL
Sbjct: 463 LLDGLCDNGE------PEKALEIFEKIEKSKMEL 490
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 168/366 (45%), Gaps = 17/366 (4%)
Query: 49 RSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQIN----APDSFTWNVMIRGCTLSGSPE 104
++GL + + ++ C K++ A +F++++ PD T+ +I G G +
Sbjct: 405 KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVD 464
Query: 105 HALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMM 164
A ++++ML + Y +IK + G ++ I D + NT M
Sbjct: 465 DAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYM 524
Query: 165 NFYFKCGNEEDGCKVFDKMRGCSVV----SWTTLIAGLIACGKVDRAREVFDEMPSKNVV 220
+ FK G E G +F++++ V S++ LI GLI G + E+F M + V
Sbjct: 525 DCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCV 584
Query: 221 ----SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWI 276
++ +IDG+ KC + +A+ L E M+ + P T S++ ++ L +
Sbjct: 585 LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYML 644
Query: 277 HDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTMITSLGV 332
+ A IEL + ++LID + K G +D+A+++ + ++ NL TWN+++ +L
Sbjct: 645 FEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK 704
Query: 333 HGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILE 392
EAL F+ M++ P+ VT+ +++ + + ++ M + G+ P
Sbjct: 705 AEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ-GMKPSTI 763
Query: 393 HYVCMV 398
Y M+
Sbjct: 764 SYTTMI 769
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 144/339 (42%), Gaps = 21/339 (6%)
Query: 58 LLRKLLQHSCAYGKMNYASLVFDQINA----PDSFTWNVMIRGCTLSGSPEHALVLFKEM 113
L L++ G+++ A + D++ + D +NV I G + A F E+
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI 264
Query: 114 LLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNE 173
G PD+ TY +I +N D + K R TY NTM+ Y G
Sbjct: 265 EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKF 324
Query: 174 EDGCKVFDKMRG----CSVVSWTTLIAGLIACGKVDRAREVFDEM---PSKNVVSWTAMI 226
++ + ++ R SV+++ ++ L GKVD A +VF+EM + N+ ++ +I
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILI 384
Query: 227 DGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH---DYAIKN 283
D + + AF+L + MQ + PN T+ +V + L + DY +
Sbjct: 385 DMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCT 444
Query: 284 GIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLAT----WNTMITSLGVHGLSEEA 339
E+ +LID K G +DDA+ V+ M + + T + ++I + HG E+
Sbjct: 445 PDEI---TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 340 LDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYF 378
++K+M N PD + + E+G F
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 146/363 (40%), Gaps = 33/363 (9%)
Query: 109 LFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYF 168
+ EM + GF P T ++ C+ +N G V + K +F T++ +
Sbjct: 120 ILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFS 179
Query: 169 KCGNEEDGCKVFDKMRGC----SVVSWTTLIAGLIACGKVDRAREVFDEMPSK----NVV 220
+ + +F +M+ +V +TTLI G G+VD A + DEM S ++V
Sbjct: 180 AVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV 239
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
+ ID + K + A+ F ++ ++P+E T S++ + L + ++
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTMITSLGVHGLS 336
KN + +I Y G D+A+ + + ++ +N ++T L G
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV 359
Query: 337 EEALDLFKEMEK--------ANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGIS 388
+EAL +F+EM+K N++ D + G L + D + G+
Sbjct: 360 DEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDS----------MQKAGLF 409
Query: 389 PILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNVV--ELLQE-SKLTSVDDIKEV 445
P + MV+ +LDE E M + T + L+ K+ VDD +V
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKV 469
Query: 446 INK 448
K
Sbjct: 470 YEK 472
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 110/247 (44%), Gaps = 8/247 (3%)
Query: 86 DSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVH 145
D+ +N++I G G A L +EM KGF P TY VI + D +
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 146 ALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM--RGCS--VVSWTTLIAGLIAC 201
A R + + +++++ + K G ++ + +++ +G + + +W +L+ L+
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA 705
Query: 202 GKVDRAREVFDEMP----SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTL 257
+++ A F M + N V++ +I+G K ++ +AF ++ MQ + ++P+ +
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY 765
Query: 258 VSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTE 317
+++S + G++ + D NG A+I+ S DA+ +F
Sbjct: 766 TTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRR 825
Query: 318 RNLATWN 324
R L N
Sbjct: 826 RGLPIHN 832
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 118/290 (40%), Gaps = 21/290 (7%)
Query: 84 APDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRA 143
P T M+ GC + + + M F P Y +I A A N D
Sbjct: 130 GPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLT 189
Query: 144 VHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCS----VVSWTTLIAGLI 199
+ ++ + ++ T++ + K G + + D+M+ S +V + I
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249
Query: 200 ACGKVDRAREVFDEMPSKNV----VSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEF 255
GKVD A + F E+ + + V++T+MI K R EA ++FE ++ P +
Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY 309
Query: 256 TLVSLVSACTEMGSLKLGKWIHDYAI-----KNGIELGPFLGTALIDMYSKCGSLDDAWI 310
+++ MG GK+ Y++ G ++ K G +D+A
Sbjct: 310 AYNTMI-----MGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALK 364
Query: 311 VFGIMTER---NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVT 357
VF M + NL+T+N +I L G + A +L M+KA + P+ T
Sbjct: 365 VFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRT 414
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 172/389 (44%), Gaps = 21/389 (5%)
Query: 31 LENC-CNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQI---- 82
L NC C QL V G++++ G D V L LL C +++ A + DQ+
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 83 NAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGR 142
P++ T+N +I G L A+ L M+ +G PD FTY V+ D
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 143 AVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM--RGC--SVVSWTTLIAGL 198
++ K + D + T+++ N D +F +M +G +VV++ +LI L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 199 IACGKVDRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNE 254
G+ A + +M + NVV+++A+ID +VK + VEA L++ M ++ P+
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 255 FTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGI 314
FT SL++ L K + + I LI + K +++ +F
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 315 MTER----NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHD 370
M++R N T+NT+I L G + A +FK+M V PD +T+ +L
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 371 VEEGERYFSLMTEHYGISPILEHYVCMVE 399
+E+ F + + + P + Y M+E
Sbjct: 481 LEKALVVFEYL-QKSKMEPDIYTYNIMIE 508
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 171/371 (46%), Gaps = 22/371 (5%)
Query: 31 LENCCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYAS-LVFDQINA-- 84
++ CN+K + + + G+ + V L++ C YG+ + AS L+ D I
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Query: 85 -PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRA 143
P+ T++ +I G A L+ EM+ + PD FTY +I + D +
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 144 VHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM--RGC--SVVSWTTLIAGLI 199
+ L I + + NT++ + K E+G ++F +M RG + V++ TLI GL
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 200 ACGKVDRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEF 255
G D A+++F +M S ++++++ ++DG K + +A +FE +Q + P+ +
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501
Query: 256 TLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM 315
T ++ + G ++ G + G++ + T +I + + G ++A +F M
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561
Query: 316 TER----NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDV 371
E N T+NT+I + G + +L KEM V DA T V++ +HD
Sbjct: 562 KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM---LHDG 618
Query: 372 EEGERYFSLMT 382
+ Y +++
Sbjct: 619 RLEKSYLEMLS 629
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 153/355 (43%), Gaps = 18/355 (5%)
Query: 46 RIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA----PDSFTWNVMIRGCTLSG 101
R++ G D ++ C G ++ A + ++ D + +I
Sbjct: 210 RMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYK 269
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKA-CIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
+ AL LF EM KG P+ TY +I+ C D R + + I+ + +
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM-IERKINPNVVTF 328
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSV----VSWTTLIAGLIACGKVDRAREVFDEMPS 216
+ +++ + K G + K++D+M S+ ++++LI G ++D A+ +F+ M S
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 388
Query: 217 K----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKL 272
K NVV++ +I G+ K +R E +LF M + N T +L+ + G +
Sbjct: 389 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM 448
Query: 273 GKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT----ERNLATWNTMIT 328
+ I + +G+ + L+D K G L+ A +VF + E ++ T+N MI
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 508
Query: 329 SLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTE 383
+ G E+ DLF + V P+ + + ++S EE + F M E
Sbjct: 509 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 136/327 (41%), Gaps = 13/327 (3%)
Query: 95 RGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFW 154
R L + A+ LF EM+ P + ++ A N FD ++ +R
Sbjct: 53 RNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRIS 112
Query: 155 GDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCS----VVSWTTLIAGLIACGKVDRAREV 210
D Y N ++N + + V KM +V+ ++L+ G ++ A +
Sbjct: 113 YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 172
Query: 211 FDEM----PSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTE 266
D+M N V++ +I G + EA L + M +P+ FT ++V+ +
Sbjct: 173 VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 232
Query: 267 MGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLAT 322
G + L + K IE + T +ID +++DA +F M + N+ T
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 323 WNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMT 382
+N++I L +G +A L +M + + P+ VTF ++ A V + E E+ + M
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 383 EHYGISPILEHYVCMVELYTGDSELDE 409
+ I P + Y ++ + LDE
Sbjct: 353 KR-SIDPDIFTYSSLINGFCMHDRLDE 378
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 151/339 (44%), Gaps = 66/339 (19%)
Query: 51 GLTHDQVLLRKLLQHSCAYGKM-----NYASLVFDQINAPDSFTWNVMIRGCTLSGSPEH 105
G+ ++VL L+ C GK+ Y S+V DQ D+ T+ V++ G + +
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV-DQGILGDAKTYTVLMNGLFKNDKVDD 610
Query: 106 ALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMN 165
A +F+EM KG APD F+Y ++N
Sbjct: 611 AEEIFREMRGKGIAPDVFSY-----------------------------------GVLIN 635
Query: 166 FYFKCGNEEDGCKVFDKM--RGCS--VVSWTTLIAGLIACGKVDRAREVFDEMPSK---- 217
+ K GN + +FD+M G + V+ + L+ G G++++A+E+ DEM K
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
N V++ +IDGY K EAF LF+ M+++ + P+ F +LV C + ++ I
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Query: 278 DYAIKN-GIELGPFLGTALIDMYSKCGS-----------LDDAWIVFGIMTERNLATWNT 325
K PF ALI+ K G +D ++ FG + N T+N
Sbjct: 756 GTNKKGCASSTAPF--NALINWVFKFGKTELKTEVLNRLMDGSFDRFG---KPNDVTYNI 810
Query: 326 MITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSA 364
MI L G E A +LF +M+ AN++P +T+ +L+
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 134/295 (45%), Gaps = 24/295 (8%)
Query: 36 NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA----PDSFTWN 91
N ++ + ++ GLT + ++ LL C G++ A + D+++ P++ T+
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 92 VMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKM 151
+I G SG A LF EM LKG PD F Y ++ C N D RA+
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN--DVERAITIFGTNK 759
Query: 152 RFWGDTYVQ-NTMMNFYFKCGNEEDGCKV--------FDKMRGCSVVSWTTLIAGLIACG 202
+ + N ++N+ FK G E +V FD+ + V++ +I L G
Sbjct: 760 KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819
Query: 203 KVDRAREVFDEMPSKN----VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLV 258
++ A+E+F +M + N V+++T++++GY K R E F +F+ + P+
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879
Query: 259 SLVSACTEMGSLKLGKWIHDY-----AIKNGIELGPFLGTALIDMYSKCGSLDDA 308
+++A + G + D A+ +G +L AL+ ++K G ++ A
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 133/332 (40%), Gaps = 45/332 (13%)
Query: 58 LLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKG 117
L++ LQ+S M + +Q APD F +N +I G + + + A EM+ G
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 118 FAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWG---DTYVQNTMMNFYFKCGNEE 174
P+ FTY I I ++ F + +MR G + + ++N Y K G
Sbjct: 518 LKPNAFTYGAFISGYIEASEF---ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 175 DGCKVFDKMRGCSVV----SWTTLIAGLIACGKVDRAREVFDEMPSK----NVVSWTAMI 226
+ C + M ++ ++T L+ GL KVD A E+F EM K +V S+ +I
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 227 DGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIE 286
+G+ K +A +F+ M E + PN L+ G ++ K + D G+
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 287 LGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEM 346
+ID Y K G L EA LF EM
Sbjct: 695 PNAVTYCTIIDGYCKSGDL-------------------------------AEAFRLFDEM 723
Query: 347 EKANVVPDAVTFVGVLSACVHMHDVEEGERYF 378
+ +VPD+ + ++ C ++DVE F
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/394 (20%), Positives = 157/394 (39%), Gaps = 56/394 (14%)
Query: 26 QALVTL-ENCCNFKQLKQVHGRII---RSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQ 81
QA +L E C K ++Q + ++ + + +++ C+ G ++ A + +
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKE 442
Query: 82 INA----PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNA 137
+ A P+ + +I+ + A+ + KEM +G APD F Y +I +
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502
Query: 138 FDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAG 197
D R+ ++ + + ++ Y + K +MR C V+ L G
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562
Query: 198 LI----ACGKVDRAREVFDEMPSKNVV----SWTAMIDGYVKCQRPVEAFDLFEGMQIEN 249
LI GKV A + M + ++ ++T +++G K + +A ++F M+ +
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 250 VRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAW 309
+ P+ F+ Y + LI+ +SK G++ A
Sbjct: 623 IAPDVFS----------------------YGV-------------LINGFSKLGNMQKAS 647
Query: 310 IVFGIMTER----NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSAC 365
+F M E N+ +N ++ G E+A +L EM + P+AVT+ ++
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707
Query: 366 VHMHDVEEGERYFSLMTEHYGISPILEHYVCMVE 399
D+ E R F M + G+ P Y +V+
Sbjct: 708 CKSGDLAEAFRLFDEM-KLKGLVPDSFVYTTLVD 740
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 145/342 (42%), Gaps = 25/342 (7%)
Query: 97 CTLS--GSPEHALVLFKEMLLKGFAPDKFTYPFVIKA-CIASNAFDFGRAVHALAIKMRF 153
C +S G E A LF M+ G P Y +I+ C N R + L ++M+
Sbjct: 355 CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV----RQGYELLVEMKK 410
Query: 154 WG---DTYVQNTMMNFYFKCGNEEDGCKVFDKM--RGC--SVVSWTTLIAGLIACGKVDR 206
Y T++ G+ + + +M GC +VV +TTLI + +
Sbjct: 411 RNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD 470
Query: 207 AREVFDEMPSKNVVS----WTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVS 262
A V EM + + + ++I G K +R EA M ++PN FT + +S
Sbjct: 471 AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS 530
Query: 263 ACTEMGSLKLG-KWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNL- 320
E K++ + + G+ L T LI+ Y K G + +A + M ++ +
Sbjct: 531 GYIEASEFASADKYVKEMR-ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 321 ---ATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERY 377
T+ ++ L + ++A ++F+EM + PD ++ +++ + ++++
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 378 FSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
F M E G++P + Y ++ + E+++ + MS+
Sbjct: 650 FDEMVEE-GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 129/301 (42%), Gaps = 19/301 (6%)
Query: 104 EHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWG---DTYVQ 160
+ AL L + M+ KG P K+TY +I + ++ L ++M G D +
Sbjct: 259 DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKS---LLVEMDSLGVSLDNHTY 315
Query: 161 NTMMNFYFKCGNEEDGCKVFDKM--RGCSVVSWT--TLIAGLIACGKVDRAREVFDEMPS 216
+ +++ K N + + +M G ++ + I + G +++A+ +FD M +
Sbjct: 316 SLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIA 375
Query: 217 KNVV----SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKL 272
++ ++ ++I+GY + + + ++L M+ N+ + +T ++V G L
Sbjct: 376 SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDG 435
Query: 273 GKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLAT----WNTMIT 328
I I +G + T LI + + DA V M E+ +A +N++I
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 329 SLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGIS 388
L +EA EM + + P+A T+ +S + + ++Y M E G+
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC-GVL 554
Query: 389 P 389
P
Sbjct: 555 P 555
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 159/380 (41%), Gaps = 22/380 (5%)
Query: 47 IIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQIN----APDSFTWNVMIRGCTLSGS 102
+I G D K+L + C KM A L+F+++ D +T+ +M+ +G
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 103 PEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNT 162
E A F EM G P+ TY +I A + + + + + + +
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 163 MMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK-NVVS 221
+++ + K G E C++F++M G V VD + +D+ + NVV+
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVP------------DVDMYFKQYDDNSERPNVVT 641
Query: 222 WTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAI 281
+ A++DG+ K R EA L + M +E PN+ +L+ ++G L + +
Sbjct: 642 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 701
Query: 282 KNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTMITSLGVHGLSE 337
++G + ++LID Y K D A V M E N+ + MI L G ++
Sbjct: 702 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 761
Query: 338 EALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCM 397
EA L + ME+ P+ VT+ ++ + +E M G++P Y +
Sbjct: 762 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK-GVAPNYVTYRVL 820
Query: 398 VELYTGDSELDEVYTSEEAM 417
++ + LD + E M
Sbjct: 821 IDHCCKNGALDVAHNLLEEM 840
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 138/339 (40%), Gaps = 30/339 (8%)
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAV 144
P T+N +I+ + + A ++ +EM L D FT C A + G+
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTL-----RCFAYSLCKVGKWR 287
Query: 145 HALAI--KMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCS----VVSWTTLIAGL 198
AL + F DT +++ + E+ ++MR S VV+++TL+ G
Sbjct: 288 EALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC 347
Query: 199 IACGKVDRAREVFDEM------PSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRP 252
+ ++ R + V + M PS + + +++ Y A+ L + M P
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKI--FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMP 405
Query: 253 NEFTLVSLV-SACTEMGSLKLGKW-IHDYAIKNGIELGPFLGTALIDMYSKC----GSLD 306
L+ S C + SL + + A + G L + +++C G +
Sbjct: 406 GYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE 465
Query: 307 DAWIVFGIMTERNL----ATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVL 362
A+ V M + +T++ ++ L E A LF+EM++ +V D T+ ++
Sbjct: 466 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMV 525
Query: 363 SACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELY 401
+ +E+ ++F+ M E G +P + Y ++ Y
Sbjct: 526 DSFCKAGLIEQARKWFNEMRE-VGCTPNVVTYTALIHAY 563
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 162/360 (45%), Gaps = 22/360 (6%)
Query: 69 YGKMNYASLVFDQINAPDS----FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFT 124
YGK+ A +F+ A + ++ +I SG E A+ +F M G P+ T
Sbjct: 246 YGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVT 305
Query: 125 YPFVIKACIASNAFDFGRAVHALAIKMRFWG---DTYVQNTMMNFYFKCGNEEDGCKVFD 181
Y VI AC +F + V +M+ G D N+++ + G E +FD
Sbjct: 306 YNAVIDAC-GKGGMEF-KQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFD 363
Query: 182 KMRG----CSVVSWTTLIAGLIACGKVDRAREVFDEMPSK----NVVSWTAMIDGYVKCQ 233
+M V S+ TL+ + G++D A E+ +MP K NVVS++ +IDG+ K
Sbjct: 364 EMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAG 423
Query: 234 RPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGT 293
R EA +LF M+ + + + +L+S T++G + I GI+
Sbjct: 424 RFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYN 483
Query: 294 ALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTMITSLGVHGLSEEALDLFKEMEKA 349
AL+ Y K G D+ VF M NL T++T+I GL +EA+++F+E + A
Sbjct: 484 ALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA 543
Query: 350 NVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDE 409
+ D V + ++ A V MT+ GISP + Y +++ + + +D
Sbjct: 544 GLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE-GISPNVVTYNSIIDAFGRSATMDR 602
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 161/380 (42%), Gaps = 47/380 (12%)
Query: 37 FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQIN----APDSFTWNV 92
FKQ+ + + R+G+ D++ LL G A +FD++ D F++N
Sbjct: 320 FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNT 379
Query: 93 MIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAI--K 150
++ G + A + +M +K P+ +Y VI + FD AL + +
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFD-----EALNLFGE 434
Query: 151 MRFWG---DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCS----VVSWTTLIAGLIACGK 203
MR+ G D NT+++ Y K G E+ + +M VV++ L+ G GK
Sbjct: 435 MRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGK 494
Query: 204 VDRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVS 259
D ++VF EM + N+++++ +IDGY K EA ++F + +R + +
Sbjct: 495 YDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSA 554
Query: 260 LVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDM------------YSKCGSLDD 307
L+ A + G + + D K GI ++ID YS GSL
Sbjct: 555 LIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPF 614
Query: 308 AWIVFGIMTER----------NLAT-WNTMITSLGVHGLSEEA--LDLFKEMEKANVVPD 354
+ +TE L T N T G+ E + L++F++M + + P+
Sbjct: 615 SSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPN 674
Query: 355 AVTFVGVLSACVHMHDVEEG 374
VTF +L+AC + E+
Sbjct: 675 VVTFSAILNACSRCNSFEDA 694
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 132/294 (44%), Gaps = 18/294 (6%)
Query: 66 SCAYGKMNYASLV--FDQIN----APDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFA 119
+C G M + + FD++ PD T+N ++ C+ G E A LF EM +
Sbjct: 312 ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIE 371
Query: 120 PDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKV 179
D F+Y ++ A D + A R + +T+++ + K G ++ +
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
Query: 180 FDKMRGCSV----VSWTTLIAGLIACGKVDRAREVFDEMPS----KNVVSWTAMIDGYVK 231
F +MR + VS+ TL++ G+ + A ++ EM S K+VV++ A++ GY K
Sbjct: 432 FGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGK 491
Query: 232 CQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFL 291
+ E +F M+ E+V PN T +L+ ++ G K I G+ L
Sbjct: 492 QGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVL 551
Query: 292 GTALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTMITSLGVHGLSEEALD 341
+ALID K G + A + MT+ N+ T+N++I + G + + D
Sbjct: 552 YSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 148/322 (45%), Gaps = 14/322 (4%)
Query: 76 SLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIAS 135
SLV D AP+ T+ +I G G + A LFK M +G PD Y +I +
Sbjct: 275 SLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKA 334
Query: 136 NAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM--RGCS--VVSW 191
G + + A+ D V ++ ++ Y K G+ V+ +M +G S VV++
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY 394
Query: 192 TTLIAGLIACGKVDRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQI 247
T LI GL G++ A ++ ++ + ++V+++++IDG+ KC F L+E M
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 248 ENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDD 307
P+ LV ++ G + + I L + +LID + + D+
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDE 514
Query: 308 AWIVFGIM----TERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLS 363
A VF +M + ++AT+ T++ + G EEAL LF M K + PDA+ + ++
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLID 574
Query: 364 A-CVHMHDVEEGERYFSLMTEH 384
A C HM G + F LM +
Sbjct: 575 AFCKHMKPT-IGLQLFDLMQRN 595
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 129/295 (43%), Gaps = 14/295 (4%)
Query: 100 SGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYV 159
SG A V++K ML +G +P+ TY +IK ++ +K
Sbjct: 369 SGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVT 428
Query: 160 QNTMMNFYFKCGNEEDGCKVFDKMRGCS----VVSWTTLIAGLIACGKVDRAREVFDEMP 215
+++++ + KCGN G +++ M VV + L+ GL G + A +M
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML 488
Query: 216 SK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLK 271
+ NVV + ++IDG+ + R EA +F M I ++P+ T +++ G L+
Sbjct: 489 GQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLE 548
Query: 272 LGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLG 331
++ K G+E LID + K +F +M +RN + + + ++
Sbjct: 549 EALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM-QRNKISADIAVCNVV 607
Query: 332 VHGL-----SEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLM 381
+H L E+A F + + + PD VT+ ++ + ++E ER F L+
Sbjct: 608 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 662
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 136/341 (39%), Gaps = 36/341 (10%)
Query: 57 VLLRKLLQHSCAYGKMNYASLVFDQIN----APDSFTWNVMIRGCTLSGSPEHALVLFKE 112
V+ L+ C + + A VF + PD T+ ++R + G E AL LF
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFR 556
Query: 113 MLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGN 172
M G PD Y +I A G + L + + D V N +++ FKC
Sbjct: 557 MFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHR 616
Query: 173 EEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKC 232
ED K F+ LI G + ++V++ MI GY
Sbjct: 617 IEDASKFFN-----------NLIEGKM----------------EPDIVTYNTMICGYCSL 649
Query: 233 QRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLG 292
+R EA +FE +++ PN TL L+ + + + + G +
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709
Query: 293 TALIDMYSKCGSLDDAWIVFGIMTERNLA----TWNTMITSLGVHGLSEEALDLFKEMEK 348
L+D +SK ++ ++ +F M E+ ++ +++ +I L G +EA ++F +
Sbjct: 710 GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 769
Query: 349 ANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISP 389
A ++PD V + ++ + + E + M + G+ P
Sbjct: 770 AKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN-GVKP 809
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 18/221 (8%)
Query: 196 AGLIACGKVDRAREV-------------FDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLF 242
G+++C KV + V D P+ NVV++ +I+G+ K AFDLF
Sbjct: 250 VGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLF 309
Query: 243 EGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKC 302
+ M+ + P+ +L+ + G L +G + A+ G++L + ++ ID+Y K
Sbjct: 310 KVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKS 369
Query: 303 GSLDDAWIVFGIM----TERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTF 358
G L A +V+ M N+ T+ +I L G EA ++ ++ K + P VT+
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429
Query: 359 VGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVE 399
++ ++ G + M + G P + Y +V+
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIK-MGYPPDVVIYGVLVD 469
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 166/419 (39%), Gaps = 52/419 (12%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQI----NAPDSFTWNVMIRGC 97
++ + + G+ D V+ + G + AS+V+ ++ +P+ T+ ++I+G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 98 TLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDT 157
G A ++ ++L +G P TY +I G A++ IKM + D
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 158 YVQNTMMNFYFKCGNEEDGCKVFDKMRGCS----VVSWTTLIAGLIACGKVDRAREVFDE 213
+ +++ K G + KM G S VV + +LI G + D A +VF
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 214 MP----SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGS 269
M +V ++T ++ + R EA LF M + P+ +L+ A +
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK 581
Query: 270 LKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTE----RNLATWNT 325
+G + D +N I + +I + KC ++DA F + E ++ T+NT
Sbjct: 582 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 641
Query: 326 MI---------------------TSLG---------VHGLSEE-----ALDLFKEMEKAN 350
MI T G +H L + A+ +F M +
Sbjct: 642 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 701
Query: 351 VVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDE 409
P+AVT+ ++ D+E + F M E GISP + Y +++ +DE
Sbjct: 702 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK-GISPSIVSYSIIIDGLCKRGRVDE 759
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 10/203 (4%)
Query: 85 PDSFTWNVMIRG-CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRA 143
PD T+N MI G C+L E A +F+ + + F P+ T +I +N D
Sbjct: 634 PDIVTYNTMICGYCSLRRLDE-AERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 692
Query: 144 VHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMR----GCSVVSWTTLIAGLI 199
+ ++ + + +M+++ K + E K+F++M+ S+VS++ +I GL
Sbjct: 693 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 752
Query: 200 ACGKVDRAREVF----DEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEF 255
G+VD A +F D +VV++ +I GY K R VEA L+E M V+P++
Sbjct: 753 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Query: 256 TLVSLVSACTEMGSLKLGKWIHD 278
+L + G W+HD
Sbjct: 813 LQRALSEYNPPKWLMSKGVWVHD 835
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 171/384 (44%), Gaps = 29/384 (7%)
Query: 46 RIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA----PDSFTWNVMIRGCTLSG 101
R++ G D V ++ C G + A + +++ P +N +I G
Sbjct: 211 RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 270
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGR---AVHALA--IKMRFWGD 156
+ AL LFKEM KG P+ TY +I +C+ ++GR A L+ I+ + D
Sbjct: 271 HMDDALNLFKEMETKGIRPNVVTYSSLI-SCLC----NYGRWSDASRLLSDMIERKINPD 325
Query: 157 TYVQNTMMNFYFKCGNEEDGCKVFDKM--RGC--SVVSWTTLIAGLIACGKVDRAREVFD 212
+ + +++ + K G + K++D+M R S+V++++LI G ++D A+++F+
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 213 EMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMG 268
M SK +VV++ +I G+ K +R E ++F M + N T L+ + G
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 269 SLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT----ERNLATWN 324
+ + I + +G+ L+D K G L+ A +VF + E + T+N
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 325 TMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEH 384
MI + G E+ DLF + V PD V + ++S EE + F M E
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 385 YGISPILEHYVCMV--ELYTGDSE 406
G P Y ++ L GD E
Sbjct: 566 -GTLPNSGCYNTLIRARLRDGDRE 588
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 150/333 (45%), Gaps = 17/333 (5%)
Query: 51 GLTHDQVLLRKLLQHSCAYGKMNYAS-LVFDQINA---PDSFTWNVMIRGCTLSGSPEHA 106
G+ + V L+ C YG+ + AS L+ D I PD FT++ +I G A
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 107 LVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNF 166
L+ EM+ + P TY +I + D + + + + D NT++
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 167 YFKCGNEEDGCKVFDKM--RGC--SVVSWTTLIAGLIACGKVDRAREVFDEMPS----KN 218
+ K E+G +VF +M RG + V++ LI GL G D A+E+F EM S N
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
++++ ++DG K + +A +FE +Q + P +T ++ + G ++ G +
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 279 YAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTMITSLGVHG 334
G++ +I + + GS ++A +F M E N +NT+I + G
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585
Query: 335 LSEEALDLFKEMEKANVVPDAVTFVGVLSACVH 367
E + +L KEM DA T +G+++ +H
Sbjct: 586 DREASAELIKEMRSCGFAGDAST-IGLVTNMLH 617
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 171/388 (44%), Gaps = 25/388 (6%)
Query: 43 VHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVF------DQINAP-DSFTWNVMIR 95
+ G +++S + KLL A KMN +V + P + +T++++I
Sbjct: 68 LFGEMVKSRPFPSIIEFSKLLS---AIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 96 G-CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFW 154
C S P AL + +M+ G+ P+ T ++ S A+ +
Sbjct: 125 CFCRRSQLP-LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 155 GDTYVQNTMMNFYFKCGNEEDGCKVFDKM--RGCS--VVSWTTLIAGLIACGKVDRAREV 210
+T NT+++ F + + D+M +GC +V++ ++ GL G D A +
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 211 FDEMPS----KNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTE 266
++M V+ + +IDG K + +A +LF+ M+ + +RPN T SL+S
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 267 MGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLAT 322
G + I+ I F +ALID + K G L +A ++ M +R ++ T
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 363
Query: 323 WNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMT 382
++++I +H +EA +F+ M + PD VT+ ++ VEEG F M+
Sbjct: 364 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 423
Query: 383 EHYGISPILEHYVCMVELY-TGDSELDE 409
+ + + + + + L+ GD ++ +
Sbjct: 424 QRGLVGNTVTYNILIQGLFQAGDCDMAQ 451
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 144/330 (43%), Gaps = 16/330 (4%)
Query: 45 GRIIRSGLTHDQVLLRKLLQHSCAYGKMNYA-SLVFDQINAP---DSFTWNVMIRGCTLS 100
G ++ ++ LL L+ C +GK + A L F +N D+ T N ++ G +
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 518
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G + A + KE+L +G D+ +Y +I C D +K D Y
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 161 NTMMNFYFKCGNEEDGCKVFD--KMRGC--SVVSWTTLIAGLIACGKVDRAREVFDEMPS 216
+ ++ F E+ + +D K G V +++ +I G + + +E FDEM S
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 638
Query: 217 KNV----VSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKL 272
KNV V + +I Y + R A +L E M+ + + PN T SL+ + + ++
Sbjct: 639 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 698
Query: 273 GKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNL----ATWNTMIT 328
K + + G+E F TALID Y K G + + M +N+ T+ MI
Sbjct: 699 AKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIG 758
Query: 329 SLGVHGLSEEALDLFKEMEKANVVPDAVTF 358
G EA L EM + +VPD++T+
Sbjct: 759 GYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 139/319 (43%), Gaps = 26/319 (8%)
Query: 96 GCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMR-FW 154
GC L AL +F + KG P K T ++ + + +N +F + A + +
Sbjct: 206 GCYL------ALDVFPVLANKGMFPSKTTCNILLTSLVRAN--EFQKCCEAFDVVCKGVS 257
Query: 155 GDTYVQNTMMNFYFKCGNEEDGCKVFDKMR----GCSVVSWTTLIAGLIACGKVDRAREV 210
D Y+ T +N + K G E+ K+F KM +VV++ T+I GL CG+ D A
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 211 FDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTE 266
++M + +++++ ++ G + +R +A+ + + M + PN +L+ + E
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 267 MGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTE----RNLAT 322
GSL I D + G+ L LI Y K G D+A + M N +
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 437
Query: 323 WNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSA-CVHMHDVEEGERYFSLM 381
+ ++I L H + + AL EM N+ P ++S C H + E +F +
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 497
Query: 382 TEHYGI----SPILEHYVC 396
+ + + S L H +C
Sbjct: 498 NKGFVVDTRTSNALLHGLC 516
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 160/373 (42%), Gaps = 25/373 (6%)
Query: 47 IIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQIN----APDSFTWNVMIRGCTLSGS 102
++ G++ D L + C GK+ A +F ++ AP+ T+N +I G + G
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 103 PEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNT 162
+ A + ++M+ +G P TY ++K + V K F + V N
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 163 MMNFYFKCGNEEDGCKVFDKM--RGCSVVS--WTTLIAGLIACGKVDRAREVFDEMPS-- 216
+++ + + G+ ++ D M +G S+ S + TLI G G+ D A + EM S
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Query: 217 --KNVVSWTAMIDGYVKCQRPV--EAFDLFEGMQIENVRPNEFTLVSLVSACTEMG--SL 270
N S+T++I + C + A M + N+ P L +L+S + G S
Sbjct: 431 FNVNQGSFTSVI--CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488
Query: 271 KLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTM 326
L W + G + AL+ + G LD+A+ + + R + ++NT+
Sbjct: 489 ALELWFQ--FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 546
Query: 327 ITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYG 386
I+ +EA EM K + PD T+ ++ +M+ VEE +++ + G
Sbjct: 547 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN-G 605
Query: 387 ISPILEHYVCMVE 399
+ P + Y M++
Sbjct: 606 MLPDVYTYSVMID 618
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 127/309 (41%), Gaps = 12/309 (3%)
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAV 144
P T++++++G T + A + KEM KGF P+ Y +I + I + + + +
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Query: 145 HALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSV----VSWTTLIAGLIA 200
L + + NT++ Y K G ++ ++ +M S+T++I L +
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447
Query: 201 CGKVDRAREVFDEMPSKNVVS----WTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFT 256
D A EM +N+ T +I G K + +A +L+ + + T
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507
Query: 257 LVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT 316
+L+ E G L I + G + LI LD+A++ M
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 317 ERNLA----TWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVE 372
+R L T++ +I L EEA+ + + ++ ++PD T+ ++ C E
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 373 EGERYFSLM 381
EG+ +F M
Sbjct: 628 EGQEFFDEM 636
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 109/260 (41%), Gaps = 25/260 (9%)
Query: 31 LENCCNFKQLKQVH---GRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA--- 84
+ CC K+L + +++ GL D L+ K+ A +D
Sbjct: 547 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 606
Query: 85 -PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRA 143
PD +T++VMI GC + E F EM+ K P+ Y +I+A S GR
Sbjct: 607 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS-----GRL 661
Query: 144 VHALAIK--MRFWG---DTYVQNTMMNFYFKCGNEEDGCKVFDKMR----GCSVVSWTTL 194
AL ++ M+ G ++ +++ E+ +F++MR +V +T L
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 195 IAGLIACGKVDRAREVFDEMPSKNV----VSWTAMIDGYVKCQRPVEAFDLFEGMQIENV 250
I G G++ + + EM SKNV +++T MI GY + EA L M+ + +
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 251 RPNEFTLVSLVSACTEMGSL 270
P+ T + + G +
Sbjct: 782 VPDSITYKEFIYGYLKQGGV 801
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 144/330 (43%), Gaps = 16/330 (4%)
Query: 45 GRIIRSGLTHDQVLLRKLLQHSCAYGKMNYA-SLVFDQINAP---DSFTWNVMIRGCTLS 100
G ++ ++ LL L+ C +GK + A L F +N D+ T N ++ G +
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 518
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G + A + KE+L +G D+ +Y +I C D +K D Y
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 161 NTMMNFYFKCGNEEDGCKVFD--KMRGC--SVVSWTTLIAGLIACGKVDRAREVFDEMPS 216
+ ++ F E+ + +D K G V +++ +I G + + +E FDEM S
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 638
Query: 217 KNV----VSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKL 272
KNV V + +I Y + R A +L E M+ + + PN T SL+ + + ++
Sbjct: 639 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 698
Query: 273 GKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNL----ATWNTMIT 328
K + + G+E F TALID Y K G + + M +N+ T+ MI
Sbjct: 699 AKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIG 758
Query: 329 SLGVHGLSEEALDLFKEMEKANVVPDAVTF 358
G EA L EM + +VPD++T+
Sbjct: 759 GYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 139/319 (43%), Gaps = 26/319 (8%)
Query: 96 GCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMR-FW 154
GC L AL +F + KG P K T ++ + + +N +F + A + +
Sbjct: 206 GCYL------ALDVFPVLANKGMFPSKTTCNILLTSLVRAN--EFQKCCEAFDVVCKGVS 257
Query: 155 GDTYVQNTMMNFYFKCGNEEDGCKVFDKMR----GCSVVSWTTLIAGLIACGKVDRAREV 210
D Y+ T +N + K G E+ K+F KM +VV++ T+I GL CG+ D A
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 211 FDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTE 266
++M + +++++ ++ G + +R +A+ + + M + PN +L+ + E
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 267 MGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTE----RNLAT 322
GSL I D + G+ L LI Y K G D+A + M N +
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 437
Query: 323 WNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSA-CVHMHDVEEGERYFSLM 381
+ ++I L H + + AL EM N+ P ++S C H + E +F +
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 497
Query: 382 TEHYGI----SPILEHYVC 396
+ + + S L H +C
Sbjct: 498 NKGFVVDTRTSNALLHGLC 516
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 160/373 (42%), Gaps = 25/373 (6%)
Query: 47 IIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQIN----APDSFTWNVMIRGCTLSGS 102
++ G++ D L + C GK+ A +F ++ AP+ T+N +I G + G
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 103 PEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNT 162
+ A + ++M+ +G P TY ++K + V K F + V N
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 163 MMNFYFKCGNEEDGCKVFDKM--RGCSVVS--WTTLIAGLIACGKVDRAREVFDEMPS-- 216
+++ + + G+ ++ D M +G S+ S + TLI G G+ D A + EM S
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Query: 217 --KNVVSWTAMIDGYVKCQRPV--EAFDLFEGMQIENVRPNEFTLVSLVSACTEMG--SL 270
N S+T++I + C + A M + N+ P L +L+S + G S
Sbjct: 431 FNVNQGSFTSVI--CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488
Query: 271 KLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTM 326
L W + G + AL+ + G LD+A+ + + R + ++NT+
Sbjct: 489 ALELWFQ--FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 546
Query: 327 ITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYG 386
I+ +EA EM K + PD T+ ++ +M+ VEE +++ + G
Sbjct: 547 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN-G 605
Query: 387 ISPILEHYVCMVE 399
+ P + Y M++
Sbjct: 606 MLPDVYTYSVMID 618
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 127/309 (41%), Gaps = 12/309 (3%)
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAV 144
P T++++++G T + A + KEM KGF P+ Y +I + I + + + +
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Query: 145 HALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSV----VSWTTLIAGLIA 200
L + + NT++ Y K G ++ ++ +M S+T++I L +
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447
Query: 201 CGKVDRAREVFDEMPSKNVVS----WTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFT 256
D A EM +N+ T +I G K + +A +L+ + + T
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507
Query: 257 LVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT 316
+L+ E G L I + G + LI LD+A++ M
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 317 ERNLA----TWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVE 372
+R L T++ +I L EEA+ + + ++ ++PD T+ ++ C E
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 373 EGERYFSLM 381
EG+ +F M
Sbjct: 628 EGQEFFDEM 636
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 109/260 (41%), Gaps = 25/260 (9%)
Query: 31 LENCCNFKQLKQVH---GRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA--- 84
+ CC K+L + +++ GL D L+ K+ A +D
Sbjct: 547 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 606
Query: 85 -PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRA 143
PD +T++VMI GC + E F EM+ K P+ Y +I+A S GR
Sbjct: 607 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS-----GRL 661
Query: 144 VHALAIK--MRFWG---DTYVQNTMMNFYFKCGNEEDGCKVFDKMR----GCSVVSWTTL 194
AL ++ M+ G ++ +++ E+ +F++MR +V +T L
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 195 IAGLIACGKVDRAREVFDEMPSKNV----VSWTAMIDGYVKCQRPVEAFDLFEGMQIENV 250
I G G++ + + EM SKNV +++T MI GY + EA L M+ + +
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 251 RPNEFTLVSLVSACTEMGSL 270
P+ T + + G +
Sbjct: 782 VPDSITYKEFIYGYLKQGGV 801
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 90/175 (51%), Gaps = 2/175 (1%)
Query: 257 LVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT 316
L+ L C E L+ K +H + L L++MYS CG ++A VF M+
Sbjct: 257 LLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMS 316
Query: 317 ERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
E+NL TW +I +G E+A+D+F ++ +PD F G+ AC + DV+EG
Sbjct: 317 EKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLL 376
Query: 377 YFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNVVELL 431
+F M+ YGI+P +E YV +VE+Y LDE E M M+ N +V E L
Sbjct: 377 HFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERM--PMEPNVDVWETL 429
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 201 CGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSL 260
CG + A VF++M KN+ +W +I + K +A D+F + E P+ +
Sbjct: 302 CGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGI 361
Query: 261 VSACTEMGSLKLG-----KWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAW-IVFGI 314
AC +G + G DY I IE +L++MY+ G LD+A V +
Sbjct: 362 FYACGMLGDVDEGLLHFESMSRDYGIAPSIE----DYVSLVEMYALPGFLDEALEFVERM 417
Query: 315 MTERNLATWNTMITSLGVHG 334
E N+ W T++ VHG
Sbjct: 418 PMEPNVDVWETLMNLSRVHG 437
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 160/407 (39%), Gaps = 52/407 (12%)
Query: 62 LLQHSCAYGKMNYASLVFDQIN----APDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKG 117
L+ C G++ A + DQ+ P + T+ V+I+ G + A LF EM+ +G
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331
Query: 118 FAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGC 177
P+ TY +I + V +K R + N ++N Y K G
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAF 391
Query: 178 KVFDKM--RGC--SVVSWTTLIAGLIACGKVDRA----REVFDEMPSKNVVSWTAMIDGY 229
++ M R C +V ++ L+ GL GK +A + + D S ++VS+ +IDG
Sbjct: 392 ELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL 451
Query: 230 VKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGP 289
+ A+ L M ++ P+ T ++++A + G + ++ GI L
Sbjct: 452 CREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDE 511
Query: 290 FLGTALIDMYSKCGSLDDAWIVFGIMTERNLAT----WNTMITSLGVHGLSEEALDLFKE 345
GT LID K G DA + + + + T N ++ L +E L + +
Sbjct: 512 VTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGK 571
Query: 346 MEKANVVPDAVTFVGVLSACVHMHD----------------------------------- 370
+ K +VP VT+ ++ + D
Sbjct: 572 INKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGR 631
Query: 371 VEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAM 417
VEE E+ S M + G+SP Y MV+ Y + +LD + AM
Sbjct: 632 VEEAEKLLSAMQDS-GVSPNHVTYTVMVKGYVNNGKLDRALETVRAM 677
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 131/321 (40%), Gaps = 39/321 (12%)
Query: 31 LENCCNF-KQLKQVH--GRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA--- 84
+E C K K VH R++ +GL+ D V L+ C G MN A + +N
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 85 -PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKA-CIASNAFDFGR 142
PD T+ +I G + A ML KG + D+ T +I C D
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 143 AVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACG 202
+ L +KMR + N +++ K GCKV ++ L G
Sbjct: 533 ILETL-VKMRILTTPHSLNVILDMLSK------GCKVKEE---------------LAMLG 570
Query: 203 KVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVS 262
K+++ V PS VV++T ++DG ++ +F + E M++ PN + +++
Sbjct: 571 KINKLGLV----PS--VVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIIN 624
Query: 263 ACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLAT 322
+ G ++ + + +G+ T ++ Y G LD A M ER
Sbjct: 625 GLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYEL 684
Query: 323 WNTMITSLGVHG--LSEEALD 341
+ + +SL + G LS++ +D
Sbjct: 685 NDRIYSSL-LQGFVLSQKGID 704
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 146/337 (43%), Gaps = 14/337 (4%)
Query: 86 DSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNA-FDFGRAV 144
DS+ + V+I G E A+ F M PD FTY +++ + F AV
Sbjct: 126 DSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAV 185
Query: 145 HALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSV----VSWTTLIAGLIA 200
+ +K + Y +M+ +K G D K+FD M G + V++T LI+GL
Sbjct: 186 YNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQ 245
Query: 201 CGKVDRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFT 256
G D AR++F EM + + V+ A++DG+ K R VEAF+L + +
Sbjct: 246 RGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRG 305
Query: 257 LVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT 316
SL+ ++ +K I+ L T LI SK G ++DA + M
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
Query: 317 ERNLAT----WNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVE 372
+ ++ +N +I +L GL EE L EM + PDA T ++ + V
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVR 425
Query: 373 EGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDE 409
E E F+ + E G SP + + +++ EL E
Sbjct: 426 EAEEIFTEI-EKSGCSPSVATFNALIDGLCKSGELKE 461
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 118/289 (40%), Gaps = 58/289 (20%)
Query: 74 YASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACI 133
YA+++ I PD + ++I+G + +G E AL L M KG +PD + Y VIKA
Sbjct: 326 YANMLKKNIK-PDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALC 384
Query: 134 ASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTT 193
+ GR +L ++M + + D C + T
Sbjct: 385 GRGLLEEGR---SLQLEMS----------------ETESFPDAC------------THTI 413
Query: 194 LIAGLIACGKVDRAREVFDEMP----SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN 249
LI + G V A E+F E+ S +V ++ A+IDG K EA L M++
Sbjct: 414 LICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVG- 472
Query: 250 VRPNEFTLVSLVSACTEMGSLKLGKWIHDYAI-KNGIELGPFLGTA----------LIDM 298
RP SL + G+ + +I K +L F T LI+
Sbjct: 473 -RP-----ASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLING 526
Query: 299 YSKCGSLDDAWIVFGIMTERNLA----TWNTMITSLGVHGLSEEALDLF 343
+ + G +D A + ++ + L+ T+NT+I L G EEA LF
Sbjct: 527 FCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 165/399 (41%), Gaps = 19/399 (4%)
Query: 37 FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA----PDSFTWNV 92
+++ K+V ++RSGL+ D R LL +C G + VF + + PD ++
Sbjct: 321 YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSS 380
Query: 93 MIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMR 152
M+ T SG+ + AL+ F + G PD Y +I+ + ++
Sbjct: 381 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Query: 153 FWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV----SWTTLIAGLIACGKVDRAR 208
D NT+++ K + K+F++M ++ + T LI G G + A
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAM 500
Query: 209 EVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSAC 264
E+F +M K +VV++ ++DG+ K A +++ M + + P + LV+A
Sbjct: 501 ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560
Query: 265 TEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLA--- 321
G L + D I I+ + ++I Y + G+ D M
Sbjct: 561 CSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDC 620
Query: 322 -TWNTMITSLGVHGLSEEALDLFKEME--KANVVPDAVTFVGVLSACVHMHDVEEGERYF 378
++NT+I +A L K+ME + +VPD T+ +L + ++E E
Sbjct: 621 ISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVL 680
Query: 379 SLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAM 417
M E G++P Y CM+ + L E + + M
Sbjct: 681 RKMIER-GVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/390 (21%), Positives = 153/390 (39%), Gaps = 51/390 (13%)
Query: 43 VHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA----PDSFTWNVMIRGCT 98
V+ I RSG+ + L ++ C GKM Q+ PD T+N +I +
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 99 LSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTY 158
G E A L M KGF+P +TY VI ++ + V A ++ D+
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 159 VQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVS----WTTLIAGLIACGKVDRAREVFDEM 214
+++ K G+ + KVF MR VV ++++++ G +D+A F+ +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 215 PSKNVVS----WTAMIDGYVK---------------------------------CQRPV- 236
++ +T +I GY + C+R +
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 237 -EAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTAL 295
EA LF M + P+ +TL L+ ++G+L+ + + I L L
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 296 IDMYSKCGSLDDAWIVFGIMTERNL----ATWNTMITSLGVHGLSEEALDLFKEMEKANV 351
+D + K G +D A ++ M + + +++ ++ +L G EA ++ EM N+
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Query: 352 VPDAVTFVGVLSACVHMHDVEEGERYFSLM 381
P + ++ + +GE + M
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 104/271 (38%), Gaps = 17/271 (6%)
Query: 31 LENCCNFKQL---KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAP-- 85
L C K L ++ + L D L L+ C G + A +F ++
Sbjct: 452 LHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI 511
Query: 86 --DSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRA 143
D T+N ++ G G + A ++ +M+ K P +Y ++ A +
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFR 571
Query: 144 VHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV----SWTTLIAGLI 199
V I + N+M+ Y + GN DG +KM V S+ TLI G +
Sbjct: 572 VWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFV 631
Query: 200 ACGKVDRAREVFDEMPSK------NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPN 253
+ +A + +M + +V ++ +++ G+ + + EA + M V P+
Sbjct: 632 REENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPD 691
Query: 254 EFTLVSLVSACTEMGSLKLGKWIHDYAIKNG 284
T +++ +L IHD ++ G
Sbjct: 692 RSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 156/340 (45%), Gaps = 53/340 (15%)
Query: 51 GLTHDQVLLRKLLQHSCAYGKMNYAS-LVFDQINA---PDSFTWNVMIRGCTLSGSPEHA 106
G+ + V L+ C+YG+ + AS L+ D I P+ T+N +I G A
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 107 LVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNF 166
L +M+ + PD FTY +I + D + + + + D NT++
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 167 YFKCGNEEDGCKVFDKM--RGC--SVVSWTTLIAGLIACGKVDRAREVFDEMPSK----N 218
+ K EDG ++F +M RG V++TTLI GL G D A++VF +M S +
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
+++++ ++DG + +A ++F+ MQ
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQ-------------------------------- 422
Query: 279 YAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTMITSLGVHG 334
K+ I+L ++ T +I+ K G +DD W +F ++ + N+ T+NTMI+ L
Sbjct: 423 ---KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR 479
Query: 335 LSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEG 374
L +EA L K+M++ +PD+ T+ ++ A H+ D ++
Sbjct: 480 LLQEAYALLKKMKEDGPLPDSGTYNTLIRA--HLRDGDKA 517
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 154/377 (40%), Gaps = 44/377 (11%)
Query: 45 GRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQI----NAPDSFTWNVMIRGCTLS 100
G++++ G V L LL C +++ A + DQ+ PD+ T+ +I G L
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
A+ L M+ +G P+ TY V+ D
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA------------------- 169
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK--- 217
F N+ + K+ VV + T+I L VD A +F EM +K
Sbjct: 170 -------FNLLNKMEAAKI-----EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 217
Query: 218 -NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWI 276
NVV+++++I R +A L M + + PN T +L+ A + G + +
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277
Query: 277 HDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERN----LATWNTMITSLGV 332
HD IK I+ F +LI+ + LD A +F M ++ L T+NT+I
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Query: 333 HGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILE 392
E+ +LF+EM +V D VT+ ++ H D + ++ F M G+ P +
Sbjct: 338 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIM 396
Query: 393 HYVCMVELYTGDSELDE 409
Y +++ + +L++
Sbjct: 397 TYSILLDGLCNNGKLEK 413
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 155/359 (43%), Gaps = 26/359 (7%)
Query: 46 RIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAP----DSFTWNVMIRGCTLSG 101
R+++ G + V ++ C G ++ A + +++ A D +N +I
Sbjct: 140 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 199
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGR---AVHALA--IKMRFWGD 156
+ AL LFKEM KG P+ TY +I +C+ S +GR A L+ I+ + +
Sbjct: 200 HVDDALNLFKEMETKGIRPNVVTYSSLI-SCLCS----YGRWSDASQLLSDMIEKKINPN 254
Query: 157 TYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSV----VSWTTLIAGLIACGKVDRAREVFD 212
N +++ + K G + K+ D M S+ ++ +LI G ++D+A+++F+
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314
Query: 213 EMPSKNVV----SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMG 268
M SK+ ++ +I G+ K +R + +LF M + + T +L+ G
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374
Query: 269 SLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLATWN 324
+ + + +G+ + L+D G L+ A VF M + ++ +
Sbjct: 375 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 434
Query: 325 TMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTE 383
TMI + G ++ DLF + V P+ VT+ ++S ++E M E
Sbjct: 435 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 493
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 115/232 (49%), Gaps = 19/232 (8%)
Query: 232 CQRPV--EAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGP 289
CQR + +A +L + + P+ V L +C + SL+ K +HD+ +++ P
Sbjct: 216 CQRRLYKDAIELLD----KGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDP 271
Query: 290 FLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKA 349
L +I M+ +C S+ DA VF M ++++ +W+ M+ + +G+ ++AL LF+EM K
Sbjct: 272 KLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKH 331
Query: 350 NVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMV----------- 398
+ P+ TF+ V AC + +EE +F M +GISP EHY+ ++
Sbjct: 332 GLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVE 391
Query: 399 -ELYTGDSELDEVYTSEEAMSLSMKTNQNV-VELLQESKLTSVDDIKEVINK 448
E Y D + EAM + + ++ +E E + VD K VINK
Sbjct: 392 AEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAVINK 443
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 104/242 (42%), Gaps = 43/242 (17%)
Query: 112 EMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCG 171
E+L KG PD+ + + ++C + + + VH ++ +F GD + N +++ + +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 172 NEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVK 231
+ D A+ VFD M K++ SW M+ Y
Sbjct: 286 SITD-------------------------------AKRVFDHMVDKDMDSWHLMMCAYSD 314
Query: 232 CQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGP-- 289
+A LFE M ++PNE T +++ AC +G ++ ++H ++KN + P
Sbjct: 315 NGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEA-FLHFDSMKNEHGISPKT 373
Query: 290 --FLGTALIDMYSKCGSLDDA-WIVFGIMTERNLATWNTMITSLGVHGLSEEALDLFKEM 346
+LG ++ + KCG L +A + + E W M +HG +DL M
Sbjct: 374 EHYLG--VLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHG----DIDLEDYM 427
Query: 347 EK 348
E+
Sbjct: 428 EE 429
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 155/336 (46%), Gaps = 53/336 (15%)
Query: 51 GLTHDQVLLRKLLQHSCAYGKMNYAS-LVFDQINA---PDSFTWNVMIRGCTLSGSPEHA 106
G+ + V L+ C+YG+ + AS L+ D I P+ T+N +I G A
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 107 LVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNF 166
L+ +M+ + PD FTY ++ + D + + + + D NT++
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 167 YFKCGNEEDGCKVFDKM--RGC--SVVSWTTLIAGLIACGKVDRAREVFDEMPSK----N 218
+ K EDG ++F +M RG V++TTLI GL G D A++VF +M S +
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
+++++ ++DG + +A ++F+ MQ
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQ-------------------------------- 497
Query: 279 YAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTMITSLGVHG 334
K+ I+L ++ T +I+ K G +DD W +F ++ + N+ T+NTMI+ L
Sbjct: 498 ---KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR 554
Query: 335 LSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHD 370
L +EA L K+M++ +P++ T+ ++ A H+ D
Sbjct: 555 LLQEAYALLKKMKEDGPLPNSGTYNTLIRA--HLRD 588
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 173/399 (43%), Gaps = 56/399 (14%)
Query: 31 LENC-CNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQI---- 82
L NC C Q+ + G++++ G V L LL C +++ A + DQ+
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 83 NAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGR 142
PD+ T+ +I G L A+ L M+ +G P+ TY V+ D
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 143 AVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM--RGC--SVVSWTTLIAGL 198
+ + D + NT+++ K + +D +F +M +G +VV++++LI+ L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 199 IACGKVDRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNE 254
+ G+ A ++ +M K N+V++ A+ID +VK + VEA L++ M ++ P+
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 255 FTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGI 314
FT SLV+ G +HD LD A +F
Sbjct: 366 FTYNSLVN----------GFCMHD-------------------------RLDKAKQMFEF 390
Query: 315 MTERN----LATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHD 370
M ++ + T+NT+I E+ +LF+EM +V D VT+ ++ H D
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450
Query: 371 VEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDE 409
+ ++ F M G+ P + Y +++ + +L++
Sbjct: 451 CDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEK 488
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 157/359 (43%), Gaps = 26/359 (7%)
Query: 46 RIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAP----DSFTWNVMIRGCTLSG 101
R+++ G + V ++ C G + A + +++ A D +N +I
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYR 274
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGR---AVHALA--IKMRFWGD 156
+ AL LFKEM KG P+ TY +I +C+ S +GR A L+ I+ + +
Sbjct: 275 HVDDALNLFKEMETKGIRPNVVTYSSLI-SCLCS----YGRWSDASQLLSDMIEKKINPN 329
Query: 157 TYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSV----VSWTTLIAGLIACGKVDRAREVFD 212
N +++ + K G + K++D M S+ ++ +L+ G ++D+A+++F+
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Query: 213 EMPSKN----VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMG 268
M SK+ VV++ +I G+ K +R + +LF M + + T +L+ G
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Query: 269 SLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLATWN 324
+ + + +G+ + L+D G L+ A VF M + ++ +
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 509
Query: 325 TMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTE 383
TMI + G ++ DLF + V P+ VT+ ++S ++E M E
Sbjct: 510 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 168/377 (44%), Gaps = 29/377 (7%)
Query: 45 GRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQI----NAPDSFTWNVMIRGCTLS 100
G+II+ G + + L+ C G+++ A + D++ + PD T N ++ G LS
Sbjct: 147 GKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLS 206
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASN----AFDFGRAVHALAIKMRFWGD 156
G A++L +M+ G P+ TY V+ S A + R + IK+ D
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL----D 262
Query: 157 TYVQNTMMNFYFKCGNEEDGCKVFDKM--RGCS--VVSWTTLIAGLIACGKVDRAREVFD 212
+ +++ K G+ ++ +F++M +G + ++++ LI G G+ D ++
Sbjct: 263 AVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLR 322
Query: 213 EMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMG 268
+M + NVV+++ +ID +VK + EA +L + M + P+ T SL+ +
Sbjct: 323 DMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKEN 382
Query: 269 SLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNL----ATWN 324
L + D + G + LI+ Y K +DD +F M+ R + T+N
Sbjct: 383 HLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 442
Query: 325 TMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYF-----S 379
T+I G A +LF+EM V P+ VT+ +L + E+ F S
Sbjct: 443 TLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS 502
Query: 380 LMTEHYGISPILEHYVC 396
M GI I+ H +C
Sbjct: 503 KMELDIGIYNIIIHGMC 519
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 143/336 (42%), Gaps = 53/336 (15%)
Query: 51 GLTHDQVLLRKLLQHSCAYGKMN-YASLVFDQINA---PDSFTWNVMIRGCTLSGSPEHA 106
G+T + + L+ C G+ + A L+ D I P+ T++V+I G A
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
Query: 107 LVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNF 166
L KEM+ +G APD TY +I N D + L + + N ++N
Sbjct: 353 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
Query: 167 YFKCGNEEDGCKVFDKM--RG--CSVVSWTTLIAGLIACGKVDRAREVFDEMPSK----N 218
Y K +DG ++F KM RG V++ TLI G GK++ A+E+F EM S+ N
Sbjct: 413 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 472
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
+V++ ++DG +A ++FE ++
Sbjct: 473 IVTYKILLDGLCDNGESEKALEIFEKIE-------------------------------- 500
Query: 279 YAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM----TERNLATWNTMITSLGVHG 334
K+ +EL + +I +DDAW +F + + + T+N MI L G
Sbjct: 501 ---KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 557
Query: 335 LSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHD 370
EA LF++ME+ PD T+ ++ A H+ D
Sbjct: 558 PLSEAELLFRKMEEDGHAPDGWTYNILIRA--HLGD 591
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 153/407 (37%), Gaps = 89/407 (21%)
Query: 106 ALVLFKEMLLKGFAPDKFTYPFVI-------KACIA-------------SNAFDF----- 140
L L K+M LKG A + +T +I K C+A N F
Sbjct: 107 VLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLIN 166
Query: 141 -----GRAVHALA-----IKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM--RGCS- 187
GR AL ++M D NT++N G E + + DKM GC
Sbjct: 167 GLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQP 226
Query: 188 ------------------------------------VVSWTTLIAGLIACGKVDRAREVF 211
V ++ +I GL G +D A +F
Sbjct: 227 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 286
Query: 212 DEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEM 267
+EM K N++++ +I G+ R + L M + PN T L+ + +
Sbjct: 287 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKE 346
Query: 268 GSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLATW 323
G L+ + +H I GI T+LID + K LD A + +M + N+ T+
Sbjct: 347 GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF 406
Query: 324 NTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTE 383
N +I ++ L+LF++M VV D VT+ ++ + + + F M
Sbjct: 407 NILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 466
Query: 384 HYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNVVEL 430
+ P + Y +++ + E SE+A+ + K ++ +EL
Sbjct: 467 RK-VPPNIVTYKILLDGLCDNGE------SEKALEIFEKIEKSKMEL 506
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 171/390 (43%), Gaps = 23/390 (5%)
Query: 31 LENC-CNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYA-SLVFDQIN-- 83
L NC C QL V ++++ G D V L LL C +++ A SLV +
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 84 -APDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGR 142
PDSFT+N +I G A+ L M++KG PD TY V+ D
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 143 AVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM--RGC--SVVSWTTLIAGL 198
++ + + + NT+++ N D +F +M +G +VV++ +LI L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 199 IACGKVDRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNE 254
G+ A + +M + NVV+++A+ID +VK + VEA L++ M ++ P+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 255 FTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGI 314
FT SL++ L K + + I LI + K +D+ +F
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 315 MTERNLATWNTMITSLGVHGL-----SEEALDLFKEMEKANVVPDAVTFVGVLSACVHMH 369
M++R L NT+ + +HG + A +FK+M V+PD +T+ +L +
Sbjct: 422 MSQRGL-VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 370 DVEEGERYFSLMTEHYGISPILEHYVCMVE 399
VE F + + + P + Y M+E
Sbjct: 481 KVETALVVFEYL-QRSKMEPDIYTYNIMIE 509
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 160/359 (44%), Gaps = 56/359 (15%)
Query: 31 LENCCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYAS-LVFDQINA-- 84
++ CN+K + + + G+ + V L++ C YG+ + AS L+ D I
Sbjct: 263 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Query: 85 -PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRA 143
P+ T++ +I G A L+ EM+ + PD FTY +I + D +
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 382
Query: 144 VHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM--RGC--SVVSWTTLIAGLI 199
+ L I + + NT++ + K ++G ++F +M RG + V++TTLI G
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF 442
Query: 200 ACGKVDRAREVFDEMPSKNVV----SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEF 255
+ D A+ VF +M S V+ +++ ++DG + A +FE +Q + P+
Sbjct: 443 QARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPD-- 500
Query: 256 TLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM 315
I+ Y I +I+ K G ++D W +F +
Sbjct: 501 --------------------IYTYNI-------------MIEGMCKAGKVEDGWDLFCSL 527
Query: 316 TER----NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHD 370
+ + N+ T+ TM++ GL EEA LF+EM++ +PD+ T+ ++ A H+ D
Sbjct: 528 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA--HLRD 584
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 164/384 (42%), Gaps = 22/384 (5%)
Query: 20 TRFDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVF 79
R+D ++ + N + G +++S V KLL A KMN LV
Sbjct: 45 VRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLS---AIAKMNKFDLVI 101
Query: 80 ---DQIN----APDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKAC 132
+Q+ + + +T++++I AL + +M+ G+ PD T ++
Sbjct: 102 SLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGF 161
Query: 133 IASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM--RGCS--V 188
N ++ ++M + D++ NT+++ F+ + + D+M +GC +
Sbjct: 162 CHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDL 221
Query: 189 VSWTTLIAGLIACGKVDRAREVFDEMPS----KNVVSWTAMIDGYVKCQRPVEAFDLFEG 244
V++ ++ GL G +D A + +M VV + +ID + +A +LF
Sbjct: 222 VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTE 281
Query: 245 MQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGS 304
M + +RPN T SL+ G + I+ I +ALID + K G
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Query: 305 LDDAWIVFGIMTER----NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVG 360
L +A ++ M +R ++ T++++I +H +EA +F+ M + P+ VT+
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 361 VLSACVHMHDVEEGERYFSLMTEH 384
++ V+EG F M++
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQR 425
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 161/378 (42%), Gaps = 19/378 (5%)
Query: 46 RIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA----PDSFTWNVMIRGCTLSG 101
R++ G D V ++ C G ++ A + ++ P +N +I
Sbjct: 211 RMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYK 270
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKA-CIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
+ AL LF EM KG P+ TY +I+ C D R + + I+ + +
Sbjct: 271 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM-IERKINPNVVTF 329
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSV----VSWTTLIAGLIACGKVDRAREVFDEMPS 216
+ +++ + K G + K++D+M S+ ++++LI G ++D A+ +F+ M S
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389
Query: 217 K----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKL 272
K NVV++ +I G+ K +R E +LF M + N T +L+ +
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN 449
Query: 273 GKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT----ERNLATWNTMIT 328
+ + + +G+ + L+D G ++ A +VF + E ++ T+N MI
Sbjct: 450 AQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIE 509
Query: 329 SLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGIS 388
+ G E+ DLF + V P+ VT+ ++S EE + F M E G
Sbjct: 510 GMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE-GPL 568
Query: 389 PILEHYVCMVELYTGDSE 406
P Y ++ + D +
Sbjct: 569 PDSGTYNTLIRAHLRDGD 586
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 156/337 (46%), Gaps = 19/337 (5%)
Query: 46 RIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA----PDSFTWNVMIRGCTLSG 101
R++ G D V ++ C G+ + A + +++ D +N +I G
Sbjct: 205 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYK 264
Query: 102 SPEHALVLFKEMLLKGFAPDKFTY-PFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
+ A LF +M KG PD FTY P + C D R + + ++ D
Sbjct: 265 HMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM-LEKNINPDLVFF 323
Query: 161 NTMMNFYFKCGNEEDGCKVFDKM---RGC--SVVSWTTLIAGLIACGKVDRAREVFDEMP 215
N +++ + K G + K++D+M + C VV++ TLI G +V+ EVF EM
Sbjct: 324 NALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMS 383
Query: 216 SK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLK 271
+ N V++T +I G+ + + A +F+ M + V P+ T L+ G+++
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVE 443
Query: 272 LGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTMI 327
+ +Y K ++L T +I+ K G ++D W +F ++ + N+ T+ TM+
Sbjct: 444 TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 503
Query: 328 TSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSA 364
+ GL EEA LF EM++ +P++ T+ ++ A
Sbjct: 504 SGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 171/384 (44%), Gaps = 21/384 (5%)
Query: 35 CNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQI----NAPDS 87
C QL + G++++ G V L LL C +++ A + DQ+ PD+
Sbjct: 121 CRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 180
Query: 88 FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHAL 147
T+ ++ G A+ L + M++KG PD TY VI D +
Sbjct: 181 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 240
Query: 148 AIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM--RGCS--VVSWTTLIAGLIACGK 203
K + D + NT+++ K + +D +F+KM +G V ++ LI+ L G+
Sbjct: 241 MEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGR 300
Query: 204 VDRAREVFDEMPSKNV----VSWTAMIDGYVKCQRPVEAFDLFEGM-QIENVRPNEFTLV 258
A + +M KN+ V + A+ID +VK + VEA L++ M + ++ P+
Sbjct: 301 WSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYN 360
Query: 259 SLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER 318
+L+ + ++ G + + G+ T LI + + D+A +VF M
Sbjct: 361 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 420
Query: 319 ----NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEG 374
++ T+N ++ L +G E AL +F+ M+K ++ D VT+ ++ A VE+G
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 375 ERYFSLMTEHYGISPILEHYVCMV 398
F ++ G+ P + Y M+
Sbjct: 481 WDLFCSLSLK-GVKPNVVTYTTMM 503
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 140/321 (43%), Gaps = 18/321 (5%)
Query: 104 EHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWG---DTYVQ 160
+ A+ LF +M+ P + ++ A N FD V +L +M+ G + Y
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDL---VISLGEQMQNLGISHNLYTY 113
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMR----GCSVVSWTTLIAGLIACGKVDRAREVFDEMP- 215
+ +N++ + + KM G S+V+ +L+ G ++ A + D+M
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173
Query: 216 ---SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKL 272
+ V++T ++ G + + EA L E M ++ +P+ T ++++ + G L
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 273 GKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLA----TWNTMIT 328
+ + K IE + +ID K +DDA+ +F M + + T+N +I+
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 329 SLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGIS 388
L +G +A L +M + N+ PD V F ++ A V + E E+ + M +
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353
Query: 389 PILEHYVCMVELYTGDSELDE 409
P + Y +++ + ++E
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEE 374
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 161/357 (45%), Gaps = 19/357 (5%)
Query: 46 RIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQIN----APDSFTWNVMIRGCTLSG 101
+++ G+ D V+ ++ C G +NYA +FDQ+ PD + ++ G SG
Sbjct: 167 QMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQN 161
A L + M + PD T+ +I A + F ++ I+M + +
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYT 286
Query: 162 TMMNFYFKCGNEEDGCKVFDKM--RGC--SVVSWTTLIAGLIACGKVDRAREVFDEMPSK 217
+++N + G ++ ++F M +GC VV++T+LI G C KVD A ++F EM K
Sbjct: 287 SLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346
Query: 218 ----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG 273
N +++T +I G+ + +P A ++F M V PN T L+ G +K
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406
Query: 274 KWIHDYAIKNGIE-LGPFLGTALIDMYSKC--GSLDDAWIVFGIMTERNL----ATWNTM 326
I + K ++ + P + T + ++ C G L+ A +VF M +R + T+ +
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTII 466
Query: 327 ITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTE 383
I + G + A++LF + V P+ VT+ ++S E F M E
Sbjct: 467 IQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 153/325 (47%), Gaps = 23/325 (7%)
Query: 45 GRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQIN----APDSFTWNVMIRGCTLS 100
G++++ G D V L+ C +M A + +Q+ PD + +I +
Sbjct: 131 GKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKN 190
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
G +AL LF +M G PD Y ++ S + ++ K + D
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITF 250
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVV----SWTTLIAGLIACGKVDRAREVFDEMPS 216
N +++ + K G D +++++M S+ ++T+LI G G VD AR++F M +
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET 310
Query: 217 K----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKL 272
K +VV++T++I+G+ KC++ +A +F M + + N T +L+ ++G +
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNV 370
Query: 273 GKWIHDYAIKNGIELGPFLGTALIDMYSKC--GSLDDAWIVFGIMTER-------NLATW 323
+ + + + G+ P + T + ++ C G + A ++F M +R N+ T+
Sbjct: 371 AQEVFSHMVSRGVP--PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTY 428
Query: 324 NTMITSLGVHGLSEEALDLFKEMEK 348
N ++ L +G E+AL +F++M K
Sbjct: 429 NVLLHGLCYNGKLEKALMVFEDMRK 453
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 100/240 (41%), Gaps = 12/240 (5%)
Query: 156 DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCS----VVSWTTLIAGLIACGKVDRAREVF 211
D Y N +MN + + KM +V++T+LI G +++ A +
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 212 DEMP----SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEM 267
++M +VV +T +ID K A LF+ M+ +RP+ SLV+
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 268 GSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLA----TW 323
G + + K I+ ALID + K G DA ++ M ++A T+
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 324 NTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTE 383
++I + G +EA +F ME PD V + +++ V++ + F M++
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 90/196 (45%), Gaps = 5/196 (2%)
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
++V++T++I+G+ R EA + M ++P+ +++ + + G + +
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLA----TWNTMITSLGVH 333
D GI + T+L++ G DA + MT+R + T+N +I +
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKE 260
Query: 334 GLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEH 393
G +A +L+ EM + ++ P+ T+ +++ V+E + F LM E G P +
Sbjct: 261 GKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM-ETKGCFPDVVA 319
Query: 394 YVCMVELYTGDSELDE 409
Y ++ + ++D+
Sbjct: 320 YTSLINGFCKCKKVDD 335
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 159/377 (42%), Gaps = 59/377 (15%)
Query: 2 KISCCNPDANVPHFNTPTTRFDSQQALVTLENCCNFKQLK---QVHGRIIRSGLTHDQVL 58
K+ ANV FNT +++ C ++ ++ + + G+ + V
Sbjct: 248 KMEAARIKANVVIFNT------------IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295
Query: 59 LRKLLQHSCAYGKMNYASLVFD-----QINAPDSFTWNVMIRGCTLSGSPEHALVLFKEM 113
L+ C YG+ + AS + +IN P+ T+N +I G A L +EM
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKIN-PNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 114 LLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNE 173
+ + PD TY +I N D + + + + NT++N + KC
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 174 EDGCKVFDKM--RGC--SVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGY 229
EDG ++F +M RG + V++TT+I G G D A+ VF +M S V
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRV---------- 464
Query: 230 VKCQRPVEAFDLFEGMQIENVRPNEFTLVS-LVSACTEMGSLKLGKWIHDYAIKNGIELG 288
P + S L+ G L I Y K+ +EL
Sbjct: 465 ----------------------PTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELN 502
Query: 289 PFLGTALIDMYSKCGSLDDAWIVF-GIMTERNLATWNTMITSLGVHGLSEEALDLFKEME 347
F+ +I+ K G + +AW +F + + ++ T+NTMI+ L L +EA DLF++M+
Sbjct: 503 IFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMK 562
Query: 348 KANVVPDAVTFVGVLSA 364
+ +P++ T+ ++ A
Sbjct: 563 EDGTLPNSGTYNTLIRA 579
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 161/385 (41%), Gaps = 55/385 (14%)
Query: 33 NC-CNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQI----NA 84
NC C QL V ++++ G D V L LL C +++ A + DQ+
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAV 144
PD+FT+ +I G L A+ L +M+ +G PD TY
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY------------------- 226
Query: 145 HALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGC----SVVSWTTLIAGLIA 200
T++N K G+ + + +KM +VV + T+I L
Sbjct: 227 ----------------GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK 270
Query: 201 CGKVDRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFT 256
V+ A ++F EM +K NVV++ ++I+ R +A L M + + PN T
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVT 330
Query: 257 LVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT 316
+L+ A + G L + +H+ I+ I+ LI+ + LD+A +F M
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV 390
Query: 317 ER----NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVE 372
+ N+ T+NT+I E+ ++LF+EM + +V + VT+ ++ D +
Sbjct: 391 SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450
Query: 373 EGERYFSLMTEHYGISPILEHYVCM 397
+ F M + + I+ + + +
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILL 475
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 92/204 (45%), Gaps = 5/204 (2%)
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
++V+ +++++GY +R +A L + M +P+ FT +L+ +
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM----TERNLATWNTMITSLGVH 333
D ++ G + +++ K G +D A + M + N+ +NT+I SL +
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKY 271
Query: 334 GLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEH 393
E A+DLF EME + P+ VT+ +++ + + R S M E I+P +
Sbjct: 272 RHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK-KINPNVVT 330
Query: 394 YVCMVELYTGDSELDEVYTSEEAM 417
+ +++ + + +L E E M
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEM 354
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 144/353 (40%), Gaps = 48/353 (13%)
Query: 84 APDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRA 143
+P+ + +I GC G E A LF EM G ++ TY +I + G
Sbjct: 195 SPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFE 254
Query: 144 VHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMR----GCSVVSWTTLIAGLI 199
++ + + + Y N +MN K G +D +VFD+MR C++V++ TLI GL
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLC 314
Query: 200 ACGKVDRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEF 255
K++ A +V D+M S N++++ +IDG+ + +A L ++ + P+
Sbjct: 315 REMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLV 374
Query: 256 TLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKC------------- 302
T LVS G + + GI+ T LID +++
Sbjct: 375 TYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSM 434
Query: 303 ----------------------GSLDDAWIVFGIMTERNL----ATWNTMITSLGVHGLS 336
G +++A +F M E+N +NTMI G S
Sbjct: 435 EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSS 494
Query: 337 EEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISP 389
AL L KEME+ + P+ ++ ++ +E ER M + GI P
Sbjct: 495 YRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDS-GIDP 546
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 160/384 (41%), Gaps = 58/384 (15%)
Query: 86 DSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNA-------- 137
D +++ ++I+GC +G E + L E+ GF+P+ Y +I C
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 138 FDFGR-------AVHALAIKMRF--------------------WGDTYVQNTMMNFYFKC 170
F+ G+ + + I F + + Y N +MN K
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 171 GNEEDGCKVFDKMR----GCSVVSWTTLIAGLIACGKVDRAREVFDEMPS----KNVVSW 222
G +D +VFD+MR C++V++ TLI GL K++ A +V D+M S N++++
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 223 TAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIK 282
+IDG+ + +A L ++ + P+ T LVS G + +
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 283 NGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLA----TWNTMITSLGVHGLSEE 338
GI+ T LID +++ +++ A + M E L T++ +I + G E
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 339 ALDLFKEMEKANVVPDAVTF-VGVLSACVHMHDVEEGERYFSLM----TEHYGISPILEH 393
A LFK M + N P+ V + +L C +EG Y +L E ++P +
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYC------KEGSSYRALKLLKEMEEKELAPNVAS 515
Query: 394 YVCMVELYTGDSELDEVYTSEEAM 417
Y M+E+ + + E E M
Sbjct: 516 YRYMIEVLCKERKSKEAERLVEKM 539
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 143/337 (42%), Gaps = 24/337 (7%)
Query: 90 WNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFD-----FGRAV 144
+ V+I S S ++ F EM+ GF P + +++ + S++F+ F
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 145 HALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMR----GCSVVSWTTLIAGLIA 200
+ + D Y ++ + G E + ++ +VV +TTLI G
Sbjct: 157 SKVVL------DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCK 210
Query: 201 CGKVDRAREVFDEMPSKNVV----SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFT 256
G++++A+++F EM +V ++T +I+G K + F+++E MQ + V PN +T
Sbjct: 211 KGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYT 270
Query: 257 LVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT 316
+++ + G K + D + G+ LI + L++A V M
Sbjct: 271 YNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK 330
Query: 317 ER----NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVE 372
NL T+NT+I G +AL L ++++ + P VT+ ++S D
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 373 EGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDE 409
+ M E GI P Y +++ + +++
Sbjct: 391 GAAKMVKEMEER-GIKPSKVTYTILIDTFARSDNMEK 426
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 159/383 (41%), Gaps = 48/383 (12%)
Query: 33 NC-CNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQI----NA 84
NC C QL V ++++ G D V L LL C +++ A + DQ+
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAV 144
PD+FT+ +I G L A+ L +M+ +G PD TY V+ D ++
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 145 HALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKV 204
K + D VV + T+I GL +
Sbjct: 246 LKKMEKGKIEAD-------------------------------VVIYNTIIDGLCKYKHM 274
Query: 205 DRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSL 260
D A +F EM +K +V +++++I R +A L M + PN T +L
Sbjct: 275 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 334
Query: 261 VSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER-- 318
+ A + G L + ++D IK I+ F ++LI+ + LD+A +F +M +
Sbjct: 335 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 394
Query: 319 --NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
N+ T++T+I EE ++LF+EM + +V + VT+ ++ D + +
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 454
Query: 377 YFSLMTEHYGISPILEHYVCMVE 399
F M G+ P + Y +++
Sbjct: 455 VFKQMVS-VGVHPNILTYNILLD 476
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 156/340 (45%), Gaps = 16/340 (4%)
Query: 49 RSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQIN----APDSFTWNVMIRGCTLSGSPE 104
+ + D V+ ++ C Y M+ A +F +++ PD FT++ +I G
Sbjct: 251 KGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS 310
Query: 105 HALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMM 164
A L +M+ + P+ T+ +I A + ++ IK D + ++++
Sbjct: 311 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Query: 165 NFYFKCGNEEDGCKVFDKM--RGC--SVVSWTTLIAGLIACGKVDRAREVFDEMPSK--- 217
N + ++ +F+ M + C +VV+++TLI G +V+ E+F EM +
Sbjct: 371 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Query: 218 -NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWI 276
N V++T +I G+ + + A +F+ M V PN T L+ + G L +
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490
Query: 277 HDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTMITSLGV 332
+Y ++ +E + +I+ K G ++D W +F ++ + N+ +NTMI+
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550
Query: 333 HGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVE 372
G EEA L K+M++ +P++ T+ ++ A + D E
Sbjct: 551 KGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 590
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 158/356 (44%), Gaps = 20/356 (5%)
Query: 31 LENCCNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYAS-LVFDQINA-- 84
++ C +K + + + G+ D L+ C YG+ + AS L+ D I
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 85 -PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRA 143
P+ T++ +I G A L+ EM+ + PD FTY +I + D +
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384
Query: 144 VHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM--RGC--SVVSWTTLIAGLI 199
+ L I + + +T++ + K E+G ++F +M RG + V++TTLI G
Sbjct: 385 MFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444
Query: 200 ACGKVDRAREVFDEMPS----KNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEF 255
D A+ VF +M S N++++ ++DG K + +A +FE +Q + P+ +
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 504
Query: 256 TLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM 315
T ++ + G ++ G + G+ +I + + GS ++A + M
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Query: 316 TER----NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVH 367
E N T+NT+I + G E + +L KEM DA T +G+++ +H
Sbjct: 565 KEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST-IGLVTNMLH 619
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 89/196 (45%), Gaps = 5/196 (2%)
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
++V+ +++++GY +R +A L + M +P+ FT +L+ +
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM----TERNLATWNTMITSLGVH 333
D ++ G + +++ K G +D A + M E ++ +NT+I L +
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKY 271
Query: 334 GLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEH 393
++AL+LF EM+ + PD T+ ++S + + R S M E I+P +
Sbjct: 272 KHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER-KINPNVVT 330
Query: 394 YVCMVELYTGDSELDE 409
+ +++ + + +L E
Sbjct: 331 FSALIDAFVKEGKLVE 346
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 168/383 (43%), Gaps = 16/383 (4%)
Query: 36 NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYA----SLVFDQINAPDSFTWN 91
+ K+ +++ ++I+ G+ + +Q C G+++ A + +Q PD T+N
Sbjct: 231 DVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYN 290
Query: 92 VMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKM 151
+I G + + A V +M+ +G PD +TY +I + A+
Sbjct: 291 NLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFN 350
Query: 152 RFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRG----CSVVSWTTLIAGLIACGKVDRA 207
F D + ++++ G +F++ G +V+ + TLI GL G + A
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 208 REVFDEMPSKNVV----SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSA 263
++ +EM K ++ ++ +++G K +A L + M + P+ FT L+
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 264 CTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----N 319
+ ++ I D + NG++ + +L++ K +D + M E+ N
Sbjct: 471 YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Query: 320 LATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFS 379
L T+N ++ SL + +EAL L +EM+ +V PDAVTF ++ D++ F
Sbjct: 531 LFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFR 590
Query: 380 LMTEHYGISPILEHYVCMVELYT 402
M E Y +S Y ++ +T
Sbjct: 591 KMEEAYKVSSSTPTYNIIIHAFT 613
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 155/375 (41%), Gaps = 24/375 (6%)
Query: 37 FKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYAS-LVFDQIN---APDSFTWNV 92
F++ + G+++ GL D L+ C G + A +V D + PD FT+
Sbjct: 302 FQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRS 361
Query: 93 MIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMR 152
+I G G AL LF E L KG P+ Y +IK SN A LA +M
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG--LSNQGMILEAAQ-LANEMS 418
Query: 153 FWG---DTYVQNTMMNFYFK--CGNEEDGCKVFDKMRGC--SVVSWTTLIAGLIACGKVD 205
G + N ++N K C ++ DG +G + ++ LI G K++
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478
Query: 206 RAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLV 261
A E+ D M +V ++ ++++G K + + + ++ M + PN FT L+
Sbjct: 479 NALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 262 SACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLA 321
+ L + + + LID + K G LD A+ +F M E
Sbjct: 539 ESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKV 598
Query: 322 TWNTMITSLGVHGLSEE-----ALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGER 376
+ +T ++ +H +E+ A LF+EM + PD T+ ++ +V G +
Sbjct: 599 SSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYK 658
Query: 377 YFSLMTEHYGISPIL 391
+ M E+ G P L
Sbjct: 659 FLLEMMEN-GFIPSL 672
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 165/361 (45%), Gaps = 23/361 (6%)
Query: 34 CCNFK--QLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQI----NAPDS 87
CC F+ + G++++ G D+V + L+ C +++ A + D++ PD
Sbjct: 131 CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDI 190
Query: 88 FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKA-CIASNAFDFGRAVHA 146
+N +I + A FKE+ KG P+ TY ++ C +S D R +
Sbjct: 191 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD 250
Query: 147 LAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCS----VVSWTTLIAGLIACG 202
+ IK + + + +++ + K G + ++F++M S +V++++LI GL
Sbjct: 251 M-IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHD 309
Query: 203 KVDRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLV 258
++D A ++FD M SK +VVS+ +I+G+ K +R + LF M + N T
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369
Query: 259 SLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER 318
+L+ + G + + GI + L+ G L+ A ++F M +R
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429
Query: 319 ----NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSA-CVH--MHDV 371
++ T+ T+I + G EEA LF + + PD VT+ ++S C +H+V
Sbjct: 430 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEV 489
Query: 372 E 372
E
Sbjct: 490 E 490
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 153/345 (44%), Gaps = 13/345 (3%)
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAV 144
P +N ++ + + L K+M + G D +T+ VI ++
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 145 HALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCS----VVSWTTLIAGLIA 200
+K+ + D +++N + + D + DKM +V++ +I L
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 201 CGKVDRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFT 256
+V+ A + F E+ K NVV++TA+++G R +A L M + + PN T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 257 LVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT 316
+L+ A + G + K + + ++ I+ ++LI+ +D+A +F +M
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 317 ER----NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVE 372
+ ++ ++NT+I E+ + LF+EM + +V + VT+ ++ DV+
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 373 EGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAM 417
+ + +FS M + +GISP + Y ++ + EL++ E M
Sbjct: 383 KAQEFFSQM-DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 134/324 (41%), Gaps = 43/324 (13%)
Query: 47 IIRSGLTHDQVLLRKLLQHSCAYGK-MNYASLVFDQIN---APDSFTWNVMIRGCTLSGS 102
I R G+ + V L+ C + + A L+ D I P+ T++ ++ +G
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 103 PEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNT 162
A LF+EM+ PD TY +I + D + L + D NT
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335
Query: 163 MMNFYFKCGNEEDGCKVFDKM--RG--CSVVSWTTLIAGLIACGKVDRAREVFDEMPSKN 218
++N + K EDG K+F +M RG + V++ TLI G G VD+A+E F +M
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM---- 391
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
D F + P+ +T L+ + G L+ I +
Sbjct: 392 ---------------------DFF------GISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 279 YAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNL----ATWNTMITSLGVHG 334
K ++L T +I K G +++AW +F ++ + L T+ TM++ L G
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Query: 335 LSEEALDLFKEMEKANVVPDAVTF 358
L E L+ +M++ ++ + T
Sbjct: 485 LLHEVEALYTKMKQEGLMKNDCTL 508
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 150/325 (46%), Gaps = 16/325 (4%)
Query: 46 RIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA----PDSFTWNVMIRGCTLSG 101
+I+ G + V L++ C +N+A +F+Q+ P+ T+N ++ G G
Sbjct: 178 QILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIG 237
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQN 161
A L ++M+ + P+ T+ +I A + + ++ + I+M + D +
Sbjct: 238 RWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYG 297
Query: 162 TMMNFYFKCGNEEDGCKVFDKMR--GC--SVVSWTTLIAGLIACGKVDRAREVFDEMPSK 217
+++N G ++ ++F M GC + V +TTLI G +V+ ++F EM K
Sbjct: 298 SLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK 357
Query: 218 ----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG 273
N +++T +I GY RP A ++F M P+ T L+ G ++
Sbjct: 358 GVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKA 417
Query: 274 KWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTMITS 329
I +Y K +++ T +I K G ++DA+ +F + + N+ T+ TMI+
Sbjct: 418 LMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISG 477
Query: 330 LGVHGLSEEALDLFKEMEKANVVPD 354
GL EA LFK+M++ +P+
Sbjct: 478 FCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 148/355 (41%), Gaps = 16/355 (4%)
Query: 45 GRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA----PDSFTWNVMIRGCTLS 100
G++++ G D V LL C + ++ A +FDQI P+ T+ +IR +
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
HA+ LF +M G P+ TY ++ + + +K R +
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSV----VSWTTLIAGLIACGKVDRAREVFDEMPS 216
+++ + K G + ++++ M SV ++ +LI GL G +D AR++F M
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 217 K----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKL 272
N V +T +I G+ K +R + +F M + V N T L+ +G +
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDV 381
Query: 273 GKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTMIT 328
+ + + L+D G ++ A ++F M +R N+ T+ +I
Sbjct: 382 AQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQ 441
Query: 329 SLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTE 383
+ G E+A DLF + + P+ +T+ ++S + E + F M E
Sbjct: 442 GMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 153/363 (42%), Gaps = 27/363 (7%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLV---FDQIN----APDSFTWNVM 93
+ VH R + S + ++L KMN +V F+Q+ P T N++
Sbjct: 73 RMVHSRPLPSIIDFTRLL--------SVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124
Query: 94 IRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRF 153
+ LS P A +M+ GF PD T+ ++ N + A+ + M F
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 154 WGDTYVQNTMMNFYFKCGNEEDGCKVFDKM----RGCSVVSWTTLIAGLIACGKVDRA-- 207
+ T++ K + ++F++M +VV++ L+ GL G+ A
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 208 --REVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACT 265
R++ NV+++TA+ID +VK + +EA +L+ M +V P+ FT SL++
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC 304
Query: 266 EMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLA 321
G L + + +NG + T LI + K ++D +F M+++ N
Sbjct: 305 MYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTI 364
Query: 322 TWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLM 381
T+ +I + G + A ++F +M PD T+ +L VE+ F M
Sbjct: 365 TYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM 424
Query: 382 TEH 384
+
Sbjct: 425 RKR 427
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 103/228 (45%), Gaps = 16/228 (7%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA----PDSFTWNVMIRG 96
K+++ +I+ + D L+ C YG ++ A +F + P+ + +I G
Sbjct: 278 KELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHG 337
Query: 97 CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGD 156
S E + +F EM KG + TY +I+ D + V R D
Sbjct: 338 FCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397
Query: 157 TYVQNTMMNFYFKCGNEEDGCKVFDKMRG----CSVVSWTTLIAGLIACGKVDRAREVFD 212
N +++ G E +F+ MR ++V++T +I G+ GKV+ A ++F
Sbjct: 398 IRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFC 457
Query: 213 EMPSK----NVVSWTAMIDGYVKCQRPV--EAFDLFEGMQIENVRPNE 254
+ SK NV+++T MI G+ C+R + EA LF+ M+ + PNE
Sbjct: 458 SLFSKGMKPNVITYTTMISGF--CRRGLIHEADSLFKKMKEDGFLPNE 503
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAV 144
PD T+N MI+G +G + A+ ++M +G DK TY +I+AC A + DFG V
Sbjct: 255 PDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADS--DFGSCV 312
Query: 145 HALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKV 204
AL +M +E G +V +++ +I GL GK+
Sbjct: 313 -ALYQEM---------------------DEKGIQVPPH-------AFSLVIGGLCKEGKL 343
Query: 205 DRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSL 260
+ VF+ M K NV +T +IDGY K +A L M E +P+ T +
Sbjct: 344 NEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVV 403
Query: 261 VSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTE--- 317
V+ + G ++ +G+ + ++LID K G +D+A +F M+E
Sbjct: 404 VNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGC 463
Query: 318 -RNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAV-TFVGVLSACVHMHDVEEGE 375
R+ +N +I + H +EA+ LFK ME+ V T+ +LS H EE
Sbjct: 464 TRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEAL 523
Query: 376 RYFSLMTEHYGISPILEHYVCMVELYTG 403
+ + +M + GI+P C L TG
Sbjct: 524 KLWDMMIDK-GITPTA---ACFRALSTG 547
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 24/218 (11%)
Query: 46 RIIRSGLTHDQVLLRKLLQHSCAYGKMNYA-----SLVFDQINAPDSFTWNVMIRGCTLS 100
R+I G D V ++ C G++ A + FD + A +S ++ +I G +
Sbjct: 387 RMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGL-AINSMFYSSLIDGLGKA 445
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGD---- 156
G + A LF+EM KG D + Y +I A D A+A+ R +
Sbjct: 446 GRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVD-----EAIALFKRMEEEEGCD 500
Query: 157 --TYVQNTMMNFYFKCGNEEDGCKVFDKM--RGCSVVS--WTTLIAGLIACGKVDRAREV 210
Y +++ FK E+ K++D M +G + + + L GL GKV RA ++
Sbjct: 501 QTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKI 560
Query: 211 FDEMPSKNVVSWTA---MIDGYVKCQRPVEAFDLFEGM 245
DE+ V+ A MI+ K R EA L +G+
Sbjct: 561 LDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGI 598
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 150/333 (45%), Gaps = 25/333 (7%)
Query: 50 SGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA----PDSFTWNVMIRGCTLSGSPEH 105
+G+ H+ L ++ C K +A V ++ PD+ T+N +I+G L G
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 176
Query: 106 ALVLFKEMLLKGFAPDKFTYPFVIKACIASN----AFDFGRAVHALAIKMRFWGDTYVQN 161
A+VL M+ G PD TY ++ S A D R + +K D + +
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVK----ADVFTYS 232
Query: 162 TMMNFYFKCGNEEDGCKVFDKMR----GCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK 217
T+++ + G + +F +M SVV++ +L+ GL GK + + +M S+
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 218 ----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG 273
NV+++ ++D +VK + EA +L++ M + PN T +L+ L
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 274 KWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTMITS 329
+ D ++N T+LI Y +DD VF +++R N T++ ++
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412
Query: 330 LGVHGLSEEALDLFKEMEKANVVPDAVTFVGVL 362
G + A +LF+EM V+PD +T+ G+L
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTY-GIL 444
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 152/346 (43%), Gaps = 57/346 (16%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA----PDSFTWNVMIRG 96
K++ + I+S + L+R L C GK N +L+ + + P+ T+NV++
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGL----CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 97 CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGD 156
G + A L+KEM+ +G +P+ TY ++ N + L ++ + D
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 157 TYVQNTMMNFYFKCGNEEDGCKVFDKM--RG--CSVVSWTTLIAGLIACGKVDRAREVFD 212
+++ Y +DG KVF + RG + V+++ L+ G GK+ A E+F
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 213 EMPS----KNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMG 268
EM S +V+++ ++DG + +A ++FE +Q
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ---------------------- 465
Query: 269 SLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM----TERNLATWN 324
K+ ++LG + T +I+ K G ++DAW +F + + N+ T+
Sbjct: 466 -------------KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT 512
Query: 325 TMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHD 370
MI+ L G EA L ++ME+ P+ T+ ++ A H+ D
Sbjct: 513 VMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA--HLRD 556
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 159/378 (42%), Gaps = 17/378 (4%)
Query: 46 RIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQIN----APDSFTWNVMIRGCTLSG 101
R++ +G D V ++ C G + A + ++ D FT++ +I G
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQN 161
+ A+ LFKEM KG TY +++ + ++ G + + + N
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 162 TMMNFYFKCGNEEDGCKVFDKM--RGCS--VVSWTTLIAGLIACGKVDRAREVFDEMP-- 215
+++ + K G ++ +++ +M RG S ++++ TL+ G ++ A + D M
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 216 --SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG 273
S ++V++T++I GY +R + +F + + N T LV + G +KL
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 274 KWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNL----ATWNTMITS 329
+ + + +G+ L+D G L+ A +F + + + + T+I
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482
Query: 330 LGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISP 389
+ G E+A +LF + V P+ +T+ ++S + E M E G +P
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED-GNAP 541
Query: 390 ILEHYVCMVELYTGDSEL 407
Y ++ + D +L
Sbjct: 542 NDCTYNTLIRAHLRDGDL 559
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 132/286 (46%), Gaps = 24/286 (8%)
Query: 111 KEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKC 170
K++ L G A + +T +I F +V +K+ + DT NT++ F
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 171
Query: 171 GNEEDGCKVFDKM--RGCS--VVSWTTLIAGLIACGKVDRAREVFDEMPSKNV----VSW 222
G + + D+M GC VV++ +++ G+ G A ++ +M +NV ++
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 223 TAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAI- 281
+ +ID + A LF+ M+ + ++ + T SLV G K GKW +D A+
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR-----GLCKAGKW-NDGALL 285
Query: 282 -KNGI--ELGPFLGT--ALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTMITSLGV 332
K+ + E+ P + T L+D++ K G L +A ++ M R N+ T+NT++ +
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345
Query: 333 HGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYF 378
EA ++ M + PD VTF ++ + V++G + F
Sbjct: 346 QNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 130/322 (40%), Gaps = 21/322 (6%)
Query: 104 EHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAF----DFGRAVHALAIKMRFWGDTYV 159
+ A+ LF+EM+ P + A + F DF + + I + Y
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA----HNIYT 125
Query: 160 QNTMMNFYFKCGNEEDGCKVFDKMRGCS----VVSWTTLIAGLIACGKVDRAREVFDEMP 215
N M+N + +C V K+ ++ TLI GL GKV A + D M
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 216 SK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLK 271
+VV++ ++++G + A DL M+ NV+ + FT +++ + G +
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 272 LGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTMI 327
+ GI+ +L+ K G +D ++ M R N+ T+N ++
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 328 TSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGI 387
G +EA +L+KEM + P+ +T+ ++ + + E LM +
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN-KC 364
Query: 388 SPILEHYVCMVELYTGDSELDE 409
SP + + +++ Y +D+
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDD 386
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 173/389 (44%), Gaps = 51/389 (13%)
Query: 24 SQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLL-QHSCAYGKMNYASLVFDQI 82
S L ++ + L Q HG + L+++ VL + + + ++ + + ++ Q+
Sbjct: 143 SYSRLSLIDKALSIVHLAQAHG-FMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQV 201
Query: 83 NAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGR 142
+P+ FT+N++IRG +G+ + AL LF +M KG P+ TY
Sbjct: 202 -SPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTY----------------- 243
Query: 143 AVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM--RGC--SVVSWTTLIAGL 198
NT+++ Y K +DG K+ M +G +++S+ +I GL
Sbjct: 244 ------------------NTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGL 285
Query: 199 IACGKVDRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNE 254
G++ V EM + + V++ +I GY K +A + M + P+
Sbjct: 286 CREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSV 345
Query: 255 FTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGI 314
T SL+ + + G++ D G+ T L+D +S+ G +++A+ V
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 315 MTER----NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHD 370
M + ++ T+N +I V G E+A+ + ++M++ + PD V++ VLS +D
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 371 VEEGERYFSLMTEHYGISPILEHYVCMVE 399
V+E R M E GI P Y +++
Sbjct: 466 VDEALRVKREMVEK-GIKPDTITYSSLIQ 493
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 163/396 (41%), Gaps = 70/396 (17%)
Query: 36 NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA----PDSFTWN 91
NF Q +H ++R GLT + L+ C G MN A DQ+ P+ T+
Sbjct: 325 NFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYT 384
Query: 92 VMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKM 151
++ G + G A + +EM GF+P TY
Sbjct: 385 TLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY-------------------------- 418
Query: 152 RFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMR--GCS--VVSWTTLIAGLIACGKVDRA 207
N ++N + G ED V + M+ G S VVS++T+++G VD A
Sbjct: 419 ---------NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Query: 208 REVFDEMPSKNV----VSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSA 263
V EM K + ++++++I G+ + +R EA DL+E M + P+EFT +L++A
Sbjct: 470 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Query: 264 CTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDA-WIVFGIMTERNL-- 320
G L+ +H+ ++ G+ + LI+ +K +A ++ + E ++
Sbjct: 530 YCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPS 589
Query: 321 -ATWNTMITSLG---------------VHGLSEEALDLFKEMEKANVVPDAVTFVGVLSA 364
T++T+I + + G+ EA +F+ M N PD + ++
Sbjct: 590 DVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHG 649
Query: 365 CVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVEL 400
D+ + + M + S L H V ++ L
Sbjct: 650 HCRAGDIRKAYTLYKEMVK----SGFLLHTVTVIAL 681
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 168/404 (41%), Gaps = 58/404 (14%)
Query: 45 GRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQI----NAPDSFTWNVMIRGCTLS 100
G++++ G V L LL C +++ A + DQ+ PD+ T+ +I G L
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
A+ L M+ +G P+ TY V+ D
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA------------------- 244
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK--- 217
F N+ + K+ +VV ++T+I L D A +F EM +K
Sbjct: 245 -------FNLLNKMEAAKI-----EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 218 -NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWI 276
NV++++++I +R +A L M + PN T +L+ A + G L + +
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 277 HDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTMITSLGV 332
+D IK I+ F ++LI+ + LD+A +F +M + N+ T+NT+I
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 333 HGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILE 392
+E ++LF+EM + +V + VT+ ++ D + + F M G+ P +
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPNIM 471
Query: 393 HYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNVVELLQESKL 436
Y +++ + +L E+AM V E LQ SK+
Sbjct: 472 TYNTLLDGLCKNGKL------EKAMV--------VFEYLQRSKM 501
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 157/373 (42%), Gaps = 33/373 (8%)
Query: 43 VHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYA------------SLVFDQINAPDS--F 88
+HG + + + L+ +++Q C + Y L F+ +N ++
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 256
Query: 89 TWNVMIRGCTLSG-----SPEHALVLFKEMLLKGFAPDKFTYPFVIKA-CIASNAFDFGR 142
NV+I + + AL LF EM KG P+ TY +I C D R
Sbjct: 257 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASR 316
Query: 143 AVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSV----VSWTTLIAGL 198
+ + I+ + + N +++ + K G + K++D+M S+ ++++LI G
Sbjct: 317 LLSDM-IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 199 IACGKVDRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNE 254
++D A+ +F+ M SK NVV++ +I+G+ K +R E +LF M + N
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 255 FTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGI 314
T +L+ + + + + +G+ L+D K G L+ A +VF
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 315 MT----ERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHD 370
+ E + T+N MI + G E+ DLF + V PD + + ++S
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGL 555
Query: 371 VEEGERYFSLMTE 383
EE + F M E
Sbjct: 556 KEEADALFRKMRE 568
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 138/321 (42%), Gaps = 47/321 (14%)
Query: 51 GLTHDQVLLRKLLQHSCAYGKMNYAS-LVFDQINA---PDSFTWNVMIRGCTLSGSPEHA 106
G+ + + L+ C Y + + AS L+ D I P+ T+N +I G A
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 107 LVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNF 166
L+ EM+ + PD FTY +I + D + + L I
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS---------------- 393
Query: 167 YFKCGNEEDGCKVFDKMRGC--SVVSWTTLIAGLIACGKVDRAREVFDEMPSK----NVV 220
+ C +VV++ TLI G ++D E+F EM + N V
Sbjct: 394 -----------------KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
++T +I G+ + + A +F+ M + V PN T +L+ + G L+ + +Y
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTMITSLGVHGLS 336
++ +E + +I+ K G ++D W +F ++ + ++ +NTMI+ GL
Sbjct: 497 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLK 556
Query: 337 EEALDLFKEMEKANVVPDAVT 357
EEA LF++M + +PD+ T
Sbjct: 557 EEADALFRKMREDGPLPDSGT 577
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 127/283 (44%), Gaps = 40/283 (14%)
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAV 144
PD T+N +I+G L+ + A+ LF+EM KG PD+FTY +I + + D
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD----- 452
Query: 145 HALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKV 204
AL + + E GC SV+++ TLI G K
Sbjct: 453 EALNMLKQM-------------------ELSGC-------ARSVITYNTLIDGFCKANKT 486
Query: 205 DRAREVFDEMP----SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSL 260
A E+FDEM S+N V++ +IDG K +R +A L + M +E +P+++T SL
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Query: 261 VSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNL 320
++ G +K I NG E LI K G ++ A + + + +
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Query: 321 A----TWNTMITSLGVHGLSEEALDLFKEM-EKANVVPDAVTF 358
+N +I L + EA++LF+EM E+ PDAV++
Sbjct: 607 NLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSY 649
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 158/365 (43%), Gaps = 18/365 (4%)
Query: 51 GLTHDQVLLRKLLQHSCAYGKMNYASLVFDQIN----APDSFTWNVMIRGCTLSGSPEHA 106
GL D+ ++Q G ++ A + +Q+ + + + NV++ G G E A
Sbjct: 219 GLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDA 278
Query: 107 LVLFKEMLLK-GFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMN 165
L +EM + GF PD++T+ ++ + + + ++ + D Y N++++
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338
Query: 166 FYFKCGNEEDGCKVFDKM--RGCS--VVSWTTLIAGLIACGKVDRAREVFDEMPSK---- 217
K G ++ +V D+M R CS V++ TLI+ L +V+ A E+ + SK
Sbjct: 339 GLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
+V ++ ++I G + A +LFE M+ + P+EFT L+ + G L +
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM----TERNLATWNTMITSLGVH 333
+G LID + K +A +F M RN T+NT+I L
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518
Query: 334 GLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEH 393
E+A L +M PD T+ +L+ D+++ MT + G P +
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN-GCEPDIVT 577
Query: 394 YVCMV 398
Y ++
Sbjct: 578 YGTLI 582
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 149/364 (40%), Gaps = 54/364 (14%)
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFD----- 139
PD T+NV+I+ + A+++ ++M G PD+ T+ V++ I D
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 140 ------FGRA---------VHALAIKMR----------------FWGDTYVQNTMMNFYF 168
FG + VH + R F+ D Y NT++N
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 169 KCGNEEDGCKVFDKM----RGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK----NVV 220
K G+ + ++ D M V ++ ++I+GL G+V A EV D+M ++ N V
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 221 SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA 280
++ +I K + EA +L + + + P+ T SL+ + ++ + +
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 281 IKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT----ERNLATWNTMITSLGVHGLS 336
G E F LID G LD+A + M R++ T+NT+I +
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 337 EEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMT------EHYGISPI 390
EA ++F EME V ++VT+ ++ VE+ + M + Y + +
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Query: 391 LEHY 394
L H+
Sbjct: 547 LTHF 550
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 153/331 (46%), Gaps = 18/331 (5%)
Query: 45 GRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQI----NAPDSFTWNVMIRGCTLS 100
G++++ G D V L LL C +++ A + DQ+ PD+ T+ +I G L
Sbjct: 137 GKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLH 196
Query: 101 GSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQ 160
A+ L M+ +G PD TY V+ D + + + +
Sbjct: 197 NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIY 256
Query: 161 NTMMNFYFKCGNEEDGCKVFDKM--RGC--SVVSWTTLIAGLIACGKVDRAREVFDEMPS 216
+T+++ K +E+D +F +M +G +V+++++LI+ L G+ A + +M
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316
Query: 217 K----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKL 272
+ N+V+++A+ID +VK + V+A L+E M ++ PN FT SL++ + L
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 273 GKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGV 332
K + + I+ LI+ + K +D +F M++R L NT+ + +
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGL-VGNTVTYTTLI 435
Query: 333 HGL-----SEEALDLFKEMEKANVVPDAVTF 358
HG + A +FK+M V P+ +T+
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTY 466
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 110/235 (46%), Gaps = 12/235 (5%)
Query: 51 GLTHDQVLLRKLLQHSCAYGKMNYAS-LVFDQINA---PDSFTWNVMIRGCTLSGSPEHA 106
G+ + + L+ C YG+ + AS L+ D I P+ T++ +I G A
Sbjct: 283 GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA 342
Query: 107 LVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNF 166
L++EM+ + P+ FTY +I + + + L I+ + NT++N
Sbjct: 343 EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLING 402
Query: 167 YFKCGNEEDGCKVFDKM--RGC--SVVSWTTLIAGLIACGKVDRAREVFDEMPS----KN 218
+ K + G ++F +M RG + V++TTLI G D A+ VF +M S N
Sbjct: 403 FCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 462
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLG 273
++++ ++DG K + +A +FE +Q + P+ +T ++ + G K+G
Sbjct: 463 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 133/307 (43%), Gaps = 28/307 (9%)
Query: 46 RIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSG---- 101
R+++ G D V ++ C G + A + +++ A NV+I +
Sbjct: 208 RMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAA-KIEANVVIYSTVIDSLCKY 266
Query: 102 -SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGR---AVHALA--IKMRFWG 155
+ AL LF EM KG P+ TY +I +C+ ++GR A L+ I+ +
Sbjct: 267 RHEDDALNLFTEMENKGVRPNVITYSSLI-SCLC----NYGRWSDASRLLSDMIERKINP 321
Query: 156 DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSV----VSWTTLIAGLIACGKVDRAREVF 211
+ + +++ + K G K++++M S+ ++++LI G ++ A+++
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML 381
Query: 212 DEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEM 267
+ M K NVV++ +I+G+ K +R + +LF M + N T +L+ +
Sbjct: 382 ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQA 441
Query: 268 GSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT----ERNLATW 323
+ + + G+ L+D K G L A +VF + E ++ T+
Sbjct: 442 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501
Query: 324 NTMITSL 330
N MI +
Sbjct: 502 NIMIEGM 508
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 136/335 (40%), Gaps = 51/335 (15%)
Query: 104 EHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWG---DTYVQ 160
+ A+ LF M P + ++ A N FD V + KM G + Y
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDL---VISFGEKMEILGISHNLYTY 116
Query: 161 NTMMNFYFKCGNEEDGCKVFDKMRGCS----VVSWTTLIAGLIACGKVDRAREVFDEMP- 215
N ++N + +C + KM +V+ +L+ G ++ A + D+M
Sbjct: 117 NILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVE 176
Query: 216 ---SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKL 272
+ V++T +I G + EA L + M +P+ T ++V+ + G L
Sbjct: 177 MGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDL 236
Query: 273 GKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGV 332
+++ +K ++ A I E N+ ++T+I SL
Sbjct: 237 A----------------------LNLLNK---MEAAKI------EANVVIYSTVIDSLCK 265
Query: 333 HGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILE 392
+ ++AL+LF EME V P+ +T+ ++S + + R S M E I+P L
Sbjct: 266 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER-KINPNLV 324
Query: 393 HYVCMVELYTGDSEL---DEVYTSEEAMSLSMKTN 424
+ +++ + +L +++Y EE + S+ N
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLY--EEMIKRSIDPN 357
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 133/292 (45%), Gaps = 13/292 (4%)
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAV 144
P+ T+N +I G G E A+ + + M + +P+ TY +IK SN +
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVL 450
Query: 145 HALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV----SWTTLIAGLIA 200
+ + ++ + D N++++ + GN + ++ M +V ++T++I L
Sbjct: 451 NKM-LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 201 CGKVDRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFT 256
+V+ A ++FD + K NVV +TA+IDGY K + EA + E M +N PN T
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 257 LVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM- 315
+L+ G LK + + +K G++ T LI K G D A+ F M
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 316 ---TERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSA 364
T+ + T+ T I + G +A D+ +M + V PD T+ ++
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 169/405 (41%), Gaps = 38/405 (9%)
Query: 39 QLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKM----NYASLVFDQINAPDSFTWNVMI 94
++KQV+ ++ + + K++ C G + Y S + + PD FT+ +I
Sbjct: 201 EMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLI 260
Query: 95 RGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKA-CIASNAFDFGRAVHALAIKMRF 153
G + A +F EM LKG ++ Y +I C+A R A+ + ++
Sbjct: 261 MGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR------RIDEAMDLFVKM 314
Query: 154 WGD---TYVQNTMMNFYFKCGNEE--DGCKVFDKMRGCSVV----SWTTLIAGLIACGKV 204
D V+ + CG+E + + +M + ++T LI L + K
Sbjct: 315 KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKF 374
Query: 205 DRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSL 260
++ARE+ +M K NV+++ A+I+GY K +A D+ E M+ + PN T L
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
Query: 261 VSACTEMGSLK----LGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT 316
+ + K L K + + + + +LID + G+ D A+ + +M
Sbjct: 435 IKGYCKSNVHKAMGVLNKMLERKVLPDVVTY-----NSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 317 ERNLA----TWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVE 372
+R L T+ +MI SL EEA DLF +E+ V P+ V + ++ V+
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 373 EGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAM 417
E M + L + ++ D +L E EE M
Sbjct: 550 EAHLMLEKMLSKNCLPNSLT-FNALIHGLCADGKLKEATLLEEKM 593
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/477 (22%), Positives = 181/477 (37%), Gaps = 67/477 (14%)
Query: 36 NFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQI------------- 82
N ++ Q +I+ +GL D L+ C ++ A VF+++
Sbjct: 233 NVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYT 292
Query: 83 -------------NAPDSF-------------TWNVMIRGCTLSGSPEHALVLFKEMLLK 116
A D F T+ V+I+ S AL L KEM
Sbjct: 293 HLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEET 352
Query: 117 GFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDG 176
G P+ TY +I + + F+ R + ++ + N ++N Y K G ED
Sbjct: 353 GIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412
Query: 177 CKVFDKMRGCSVV----SWTTLIAGLIACGKVDRAREVFDEMPSK----NVVSWTAMIDG 228
V + M + ++ LI G V +A V ++M + +VV++ ++IDG
Sbjct: 413 VDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDG 471
Query: 229 YVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELG 288
+ A+ L M + P+++T S++ + + ++ + D + G+
Sbjct: 472 QCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPN 531
Query: 289 PFLGTALIDMYSKCGSLDDAWIVFGIMTERNL----ATWNTMITSLGVHGLSEEALDLFK 344
+ TALID Y K G +D+A ++ M +N T+N +I L G +EA L +
Sbjct: 532 VVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEE 591
Query: 345 EMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGD 404
+M K + P T ++ + D + F M G P Y ++ Y +
Sbjct: 592 KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS-GTKPDAHTYTTFIQTYCRE 650
Query: 405 SELDEVYTSEEAMSLSMKTNQNVVELLQESKLTSVDDIKEVINKHYGDLNFSKLDLD 461
L + E M M+ N +L S L K YGDL + D
Sbjct: 651 GRLLDA----EDMMAKMRENGVSPDLFTYSSLI----------KGYGDLGQTNFAFD 693
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 175/451 (38%), Gaps = 86/451 (19%)
Query: 13 PHFNTPTTRFDSQQALVTLENCCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKM 72
P+ +T T DS L + C F++ +++ G+++ GL + + L+ C G +
Sbjct: 356 PNIHTYTVLIDS------LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Query: 73 NYASLVFDQINA----PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFV 128
A V + + + P++ T+N +I+G S + A+ + +ML + PD TY +
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSL 468
Query: 129 IKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMR---- 184
I S FD + +L D + +M++ K E+ C +FD +
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 185 GCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV----SWTAMIDGYVKCQRPVEAFD 240
+VV +T LI G GKVD A + ++M SKN + ++ A+I G + EA
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Query: 241 LFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYA-----IKNGIELGPFLGTAL 295
L E M ++P T L+ LK G + H Y+ + +G + T
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRL-----LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 296 IDMYSKCGSLDDAWIVFGIMTER----NLATWNTMITSLGVHGLSEEALDLFKEMEKANV 351
I Y + G L DA + M E +L T++++I G G + A D+ K M
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGC 703
Query: 352 VPDAVTFVGVLSACVHMH------------------------------------------ 369
P TF+ ++ + M
Sbjct: 704 EPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSY 763
Query: 370 -----------DVEEGERYFSLMTEHYGISP 389
++ E+ F M + GISP
Sbjct: 764 EKLILGICEVGNLRVAEKVFDHMQRNEGISP 794
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 158/417 (37%), Gaps = 78/417 (18%)
Query: 3 ISCCNPDANVPHFNTPTTRFDSQQALVTLENCCN-FKQLKQVHGRIIRSGLTHDQVLLRK 61
+S N VP T T+ DS +E C+ F L+Q G+ + V+
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ-------KGVNPNVVMYTA 537
Query: 62 LLQHSCAYGKMNYASLVFDQINA----PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKG 117
L+ C GK++ A L+ +++ + P+S T+N +I G G + A +L ++M+ G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 118 FAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGC 177
P T +I + FD + + D + T + Y + G D
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 178 KVFDKMR--GCS--VVSWTTLIAGLIACGKVDRAREVFDEM------PSKN-----VVSW 222
+ KMR G S + ++++LI G G+ + A +V M PS++ +
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Query: 223 TAMIDGYVKCQRP-------VEAFD----LFEGMQIENVRPNEFTLVSLVSACTEMGSLK 271
M G K P + FD L E M +V PN + L+ E+G+L+
Sbjct: 718 LEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLR 777
Query: 272 LGKWIHDYAIKN-GIELGPFLGTALIDMYSKCGSLDDAWIVFGIM--------------- 315
+ + + D+ +N GI + AL+ K ++A V M
Sbjct: 778 VAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVL 837
Query: 316 ---------TERNLA---------------TWNTMITSLGVHGLSEEALDLFKEMEK 348
ER + W +I +G GL E +LF MEK
Sbjct: 838 ICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEK 894
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 2/162 (1%)
Query: 257 LVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLG-TALIDMYSKCGSLDDAWIVFGIM 315
L + C + +L+ K +H++ I + + + ++I+MYS CGS++DA VF M
Sbjct: 184 LFWIAQLCGDAQALQEAKVVHEF-ITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSM 242
Query: 316 TERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGE 375
ERNL TW +I +G E+A+D F ++ PD F + AC + D+ EG
Sbjct: 243 PERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGL 302
Query: 376 RYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAM 417
+F M + YGI P +EHYV +V++ LDE E+M
Sbjct: 303 LHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM 344
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Query: 188 VVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQI 247
+ ++ ++I CG V+ A VF+ MP +N+ +W +I + K + +A D F +
Sbjct: 216 ISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQ 275
Query: 248 ENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLG--TALIDMYSKCGSL 305
E +P+ + AC +G + G +H ++ + P + +L+ M ++ G L
Sbjct: 276 EGNKPDGEMFKEIFFACGVLGDMNEG-LLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYL 334
Query: 306 DDAWIVFGIMTERNLATWNTMITSLGVHG---LSEEALDLFKEME--------KANVVP 353
D+A + F E N+ W T++ VHG L + D+ ++++ KA +VP
Sbjct: 335 DEA-LRFVESMEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLVP 392
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 174/384 (45%), Gaps = 27/384 (7%)
Query: 51 GLTHDQVLLRKLLQHSCAYGKMNYASLVFDQI----NAPDSFTWNVMIRGCTLSGSPEHA 106
GL D V+ L++ C G+++ +FD++ ++P + T+N +IRG G + A
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301
Query: 107 LVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNF 166
+F+ M+ +G P+ +TY +I + L I+ + N ++N
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINK 361
Query: 167 YFKCGNEEDGCKVFDKMRGCSV----VSWTTLIAGLIACGKVDRAREVFDEM------PS 216
K G D ++ + M+ +++ L+ GL A G +D A ++ M
Sbjct: 362 LCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD 421
Query: 217 KNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMG----SLKL 272
+V+S+ A+I G K R +A D+++ + + + T L+++ + G +++L
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481
Query: 273 GKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLA----TWNTMIT 328
K I D I + TA+ID + K G L+ A + M L +N +++
Sbjct: 482 WKQISDSKIVRNSDTY----TAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLS 537
Query: 329 SLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGIS 388
SL G ++A LF+EM++ N PD V+F ++ + D++ E M+ G+S
Sbjct: 538 SLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS-RAGLS 596
Query: 389 PILEHYVCMVELYTGDSELDEVYT 412
P L Y ++ + LDE +
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAIS 620
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 150/347 (43%), Gaps = 59/347 (17%)
Query: 50 SGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVL 109
SGL V +RK A+G + +L+ + A + + N++++G + A+ L
Sbjct: 111 SGLLECYVQMRK---TGFAFGVL---ALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSL 164
Query: 110 FKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNT---MMNF 166
+EM PD F+Y VI+ + +A+ LA +M+ G ++ T +++
Sbjct: 165 LREMRRNSLMPDVFSYNTVIRGFCEGKELE--KALE-LANEMKGSGCSWSLVTWGILIDA 221
Query: 167 YFKCGNEEDGCKVFDKMR----GCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKN---- 218
+ K G ++ +M+ +V +T+LI G CG++DR + +FDE+ +
Sbjct: 222 FCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPC 281
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
+++ +I G+ K + EA ++FE M VRPN +T
Sbjct: 282 AITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY--------------------- 320
Query: 279 YAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTMITSLGVHG 334
T LID G +A + +M E+ N T+N +I L G
Sbjct: 321 --------------TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDG 366
Query: 335 LSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLM 381
L +A+++ + M+K PD +T+ +L D++E + LM
Sbjct: 367 LVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 148/336 (44%), Gaps = 26/336 (7%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDS-----FTWNVMIRG 96
+V+ +++ + + + LR L + S ++ A VF Q A DS F N ++
Sbjct: 27 RVYSKLV-NAFSETETKLRSLCEDSNP--QLKNAVSVFQQ--AVDSGSSLAFAGNNLMAK 81
Query: 97 CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGD 156
S + E A +++ML + + +++ + F V AL +K F +
Sbjct: 82 LVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFN 141
Query: 157 TYVQNTMMNFYFKCGNEEDGCKV--FDKMRGCS----VVSWTTLIAGLIACGKVDRAREV 210
Y N ++ C N E G V +MR S V S+ T+I G ++++A E+
Sbjct: 142 VYNHNILLKGL--CRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALEL 199
Query: 211 FDEMP----SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTE 266
+EM S ++V+W +ID + K + EA + M+ + + SL+ +
Sbjct: 200 ANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCD 259
Query: 267 MGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLAT 322
G L GK + D ++ G LI + K G L +A +F M ER N+ T
Sbjct: 260 CGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYT 319
Query: 323 WNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTF 358
+ +I L G ++EAL L M + + P+AVT+
Sbjct: 320 YTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTY 355
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 158/393 (40%), Gaps = 24/393 (6%)
Query: 5 CCNPDANVPHFNTPTTRFDSQQALV---TLENCCNFKQLKQ---VHGRIIRSGLTHDQVL 58
C D F+ R DS A+ + C QLK+ + +I G+ +
Sbjct: 260 CGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYT 319
Query: 59 LRKLLQHSCAYGKMNYA----SLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEML 114
L+ C GK A +L+ ++ P++ T+N++I G A+ + + M
Sbjct: 320 YTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMK 379
Query: 115 LKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYV--QNTMMNFYFKCGN 172
+ PD TY ++ A D + L +K + D V N +++ K
Sbjct: 380 KRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENR 439
Query: 173 EEDGCKVFD----KMRGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVV----SWTA 224
++D K+ V+ L+ + G V++A E++ ++ +V ++TA
Sbjct: 440 LHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTA 499
Query: 225 MIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNG 284
MIDG+ K A L M++ ++P+ F L+S+ + GSL + + ++
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 285 IELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLA----TWNTMITSLGVHGLSEEAL 340
+ID K G + A + M+ L+ T++ +I G +EA+
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI 619
Query: 341 DLFKEMEKANVVPDAVTFVGVLSACVHMHDVEE 373
F +M + PDA VL C+ + ++
Sbjct: 620 SFFDKMVDSGFEPDAHICDSVLKYCISQGETDK 652
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 169/348 (48%), Gaps = 25/348 (7%)
Query: 62 LLQHSCAYGKMNYASLVFDQIN----APDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKG 117
+L H C M+ A +VF I P+++T++++I GC + ++AL + M
Sbjct: 485 MLGH-CRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSN 543
Query: 118 FAPDKFTYPFVIKACIASNAFDFGRAVHALAIK-MRFWGDTYVQNTMMNFYFKCGNEEDG 176
+ Y +I R + A I+ R N++++ +FK G +
Sbjct: 544 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSA 603
Query: 177 CKVFDKMRG----CSVVSWTTLIAGLIACGKVDRAREVFDEMPSK----NVVSWTAMIDG 228
+++M G +V+++T+L+ GL ++D+A E+ DEM +K ++ ++ A+IDG
Sbjct: 604 VAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDG 663
Query: 229 YVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGI--E 286
+ K A LF + E + P++ SL+S +G++ ++ +K+G+ +
Sbjct: 664 FCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCD 723
Query: 287 LGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLATWNTMITSLGVHGLSEEA-----LD 341
LG + T LID K G+L A ++ M L + +I ++ V+GLS++ +
Sbjct: 724 LGTY--TTLIDGLLKDGNLILASELYTEMQAVGLVP-DEIIYTVIVNGLSKKGQFVKVVK 780
Query: 342 LFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISP 389
+F+EM+K NV P+ + + V++ +++E R M + GI P
Sbjct: 781 MFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDK-GILP 827
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 127/292 (43%), Gaps = 13/292 (4%)
Query: 88 FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHAL 147
F N ++ G + A L +M +G P+ +Y V+ D R V +
Sbjct: 444 FVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSN 503
Query: 148 AIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSV----VSWTTLIAGLIACGK 203
++ + Y + +++ F+ +E++ +V + M ++ V + T+I GL G+
Sbjct: 504 ILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQ 563
Query: 204 VDRAREVFDEMPSK-----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLV 258
+ARE+ M + + +S+ ++IDG+ K A +E M + PN T
Sbjct: 564 TSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYT 623
Query: 259 SLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER 318
SL++ + + + D G++L ALID + K +++ A +F + E
Sbjct: 624 SLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE 683
Query: 319 NL----ATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACV 366
L +N++I+ G ALDL+K+M K + D T+ ++ +
Sbjct: 684 GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLL 735
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 162/375 (43%), Gaps = 39/375 (10%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQIN----APDSFTWNVMIRGC 97
++ ++ G++ + V L+ C + A ++FD++ +P+S T++V+I
Sbjct: 325 RLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWF 384
Query: 98 TLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKM------ 151
+G E AL +K+M + G P F +I+ + H A+K+
Sbjct: 385 RKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQK-------HEEALKLFDESFE 437
Query: 152 RFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMR----GCSVVSWTTLIAGLIACGKVDRA 207
+ +V NT++++ K G ++ ++ KM G +VVS+ ++ G +D A
Sbjct: 438 TGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLA 497
Query: 208 REVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSA 263
R VF + K N +++ +IDG + A ++ M N+ N ++++
Sbjct: 498 RIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIING 557
Query: 264 CTEMGSLKLGKWIHDYAIKNGIE-----LGPFLGTALIDMYSKCGSLDDAWIVF----GI 314
++G + + + N IE + ++ID + K G +D A + G
Sbjct: 558 LCKVGQTSKAREL----LANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGN 613
Query: 315 MTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEG 374
N+ T+ +++ L + ++AL++ EM+ V D + ++ ++E
Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESA 673
Query: 375 ERYFSLMTEHYGISP 389
FS + E G++P
Sbjct: 674 SALFSELLEE-GLNP 687
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 141/345 (40%), Gaps = 43/345 (12%)
Query: 64 QHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKF 123
++S K Y+ +V ++ D+ T +++R P AL + + +G PD
Sbjct: 211 RNSLTEAKELYSRMVAIGVDG-DNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSL 269
Query: 124 TYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM 183
Y ++AC + D M N + E+ C
Sbjct: 270 LYSLAVQACCKT--LDLA---------------------MANSLLREMKEKKLCV----- 301
Query: 184 RGCSVVSWTTLIAGLIACGKVDRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAF 239
S ++T++I + G +D A + DEM S NVV+ T++I G+ K V A
Sbjct: 302 --PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSAL 359
Query: 240 DLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGP--FLGTALID 297
LF+ M+ E PN T L+ + G ++ K + Y + L P F +I
Sbjct: 360 VLFDKMEKEGPSPNSVTFSVLIEWFRKNGEME--KALEFYKKMEVLGLTPSVFHVHTIIQ 417
Query: 298 MYSKCGSLDDAWIVFGIMTERNLATW---NTMITSLGVHGLSEEALDLFKEMEKANVVPD 354
+ K ++A +F E LA NT+++ L G ++EA +L +ME + P+
Sbjct: 418 GWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPN 477
Query: 355 AVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVE 399
V++ V+ +++ FS + E G+ P Y +++
Sbjct: 478 VVSYNNVMLGHCRQKNMDLARIVFSNILEK-GLKPNNYTYSILID 521
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 165/403 (40%), Gaps = 32/403 (7%)
Query: 39 QLKQVHGRIIRSGLTHD----QVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMI 94
+ K+++ R++ G+ D Q+L+R L+ + S ++ PDS +++ +
Sbjct: 216 EAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAV 275
Query: 95 RGCTLSGSPEHALVLFKEMLLKGF-APDKFTYPFVIKACIASNAFDFGRAVHALAIKMRF 153
+ C + A L +EM K P + TY VI A + D A+ +K
Sbjct: 276 QACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMD-----DAIRLKDEM 330
Query: 154 WGDTYVQN-----TMMNFYFKCGNEEDGCKVFDKMR----GCSVVSWTTLIAGLIACGKV 204
D N +++ + K + +FDKM + V+++ LI G++
Sbjct: 331 LSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEM 390
Query: 205 DRAREVFDEMP----SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSL 260
++A E + +M + +V +I G++K Q+ EA LF+ E N F ++
Sbjct: 391 EKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE-SFETGLANVFVCNTI 449
Query: 261 VSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKC--GSLDDAWIVFGIMTER 318
+S + G + GI GP + + M C ++D A IVF + E+
Sbjct: 450 LSWLCKQGKTDEATELLSKMESRGI--GPNVVSYNNVMLGHCRQKNMDLARIVFSNILEK 507
Query: 319 NLA----TWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEG 374
L T++ +I + + AL++ M +N+ + V + +++ + +
Sbjct: 508 GLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKA 567
Query: 375 ERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAM 417
+ M E + Y +++ + + E+D + E M
Sbjct: 568 RELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 144/330 (43%), Gaps = 19/330 (5%)
Query: 51 GLTHDQVLLRKLLQHSCAYGKMNYASLVFDQIN-APDSFTWNVMIRGCTLSGSPEHALVL 109
G D +L C G+ + +I PDS ++N++IRGC+ +G E A
Sbjct: 290 GFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAY 349
Query: 110 FKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWG---DTYVQNTMMNF 166
EM+ +G P +TY +I N + A L ++R G D+ N ++N
Sbjct: 350 RDEMVKQGMVPTFYTYNTLIHGLFMENKIE---AAEILIREIREKGIVLDSVTYNILING 406
Query: 167 YFKCGNEEDGCKVFDKMRGCSV----VSWTTLIAGLIACGKVDRAREVFDEMPSK----N 218
Y + G+ + + D+M + ++T+LI L K A E+F+++ K +
Sbjct: 407 YCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPD 466
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
+V ++DG+ AF L + M + ++ P++ T L+ G + + +
Sbjct: 467 LVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMG 526
Query: 279 YAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTE----RNLATWNTMITSLGVHG 334
+ GI+ LI YSK G A++V M L T+N ++ L +
Sbjct: 527 EMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQ 586
Query: 335 LSEEALDLFKEMEKANVVPDAVTFVGVLSA 364
E A +L +EM+ +VP+ +F V+ A
Sbjct: 587 EGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 151/340 (44%), Gaps = 28/340 (8%)
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTY-PFVIKACIASNAFDFGRA 143
P T+N +++G +L G E A ++ EM KGF PD TY P + C A + R
Sbjct: 258 PTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLRE 317
Query: 144 VHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV----SWTTLIAGLI 199
+ + + D+ N ++ G+ E D+M +V ++ TLI GL
Sbjct: 318 MKEIGL----VPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLF 373
Query: 200 ACGKVDRAREVFDEMPSKNV----VSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEF 255
K++ A + E+ K + V++ +I+GY + +AF L + M + ++P +F
Sbjct: 374 MENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQF 433
Query: 256 TLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM 315
T SL+ + + + + G++ + L+D + G++D A F ++
Sbjct: 434 TYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRA---FSLL 490
Query: 316 TERNL-------ATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHM 368
E ++ T+N ++ L G EEA +L EM++ + PD +++ ++S
Sbjct: 491 KEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 550
Query: 369 HDVEEGERYFSLMTE--HYGISPILEHYVCMVELYTGDSE 406
D + F + E G +P L Y +++ + + E
Sbjct: 551 GDTKHA---FMVRDEMLSLGFNPTLLTYNALLKGLSKNQE 587
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/320 (20%), Positives = 123/320 (38%), Gaps = 27/320 (8%)
Query: 77 LVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASN 136
L D++ + +++++R C + A+ F M KGF P T ++ N
Sbjct: 145 LAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLN 204
Query: 137 AFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMR----GCSVVSWT 192
+ +A +M + Y N M+N K G + M ++V++
Sbjct: 205 RIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYN 264
Query: 193 TLIAGLIACGKVDRAREVFDEMPSKN----------VVSWTAMIDGYVKCQRPVEAFDLF 242
TL+ G G+++ AR + EM SK ++SW C A ++
Sbjct: 265 TLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWM--------CNEG-RASEVL 315
Query: 243 EGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKC 302
M+ + P+ + L+ C+ G L++ D +K G+ + LI
Sbjct: 316 REMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFME 375
Query: 303 GSLDDAWIVFGIMTERNL----ATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTF 358
++ A I+ + E+ + T+N +I HG +++A L EM + P T+
Sbjct: 376 NKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTY 435
Query: 359 VGVLSACVHMHDVEEGERYF 378
++ + E + F
Sbjct: 436 TSLIYVLCRKNKTREADELF 455
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 12/225 (5%)
Query: 197 GLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFE--GMQIENVRPNE 254
+ C +V ++ + S + ++ A+ VK + +E D+ E G ++ R
Sbjct: 59 SFVQCRRVSSYAQMVNNHQSVTIETFDALCKQ-VKIREALEVIDILEDKGYIVDFPR--- 114
Query: 255 FTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGI 314
L+ L C E+ +L+ + +HD L +I+MYS C S DDA VF
Sbjct: 115 --LLGLAKLCGEVEALEEARVVHDCITP----LDARSYHTVIEMYSGCRSTDDALNVFNE 168
Query: 315 MTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEG 374
M +RN TW TMI L +G E A+D+F + PD F V ACV + D+ EG
Sbjct: 169 MPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEG 228
Query: 375 ERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
+F M YG+ +E YV ++E+ LDE E M++
Sbjct: 229 LLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTV 273
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 3/161 (1%)
Query: 190 SWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIEN 249
S+ T+I C D A VF+EMP +N +W MI K A D+F E
Sbjct: 145 SYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEG 204
Query: 250 VRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKN-GIELGPFLGTALIDMYSKCGSLDDA 308
+P++ ++ AC +G + G + ++ G+ L +I+M + CG LD+A
Sbjct: 205 NKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEA 264
Query: 309 WIVFGIMT-ERNLATWNTMITSLGVHGLSEEALDLFKEMEK 348
MT E ++ W T++ V G E D F E+ K
Sbjct: 265 LDFVERMTVEPSVEMWETLMNLCWVQGYLELG-DRFAELIK 304
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 138/309 (44%), Gaps = 12/309 (3%)
Query: 88 FTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHAL 147
+T+N+MI AL + +M+ G+ P T ++ N A+
Sbjct: 101 YTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 160
Query: 148 AIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM--RGCS--VVSWTTLIAGLIACGK 203
++M + DT T+++ F+ + + ++M +GC +V++ +I GL G+
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 204 VDRAREVFDEMPS----KNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVS 259
D A + ++M +VV ++ +ID K + +A +LF M + +RP+ FT S
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 260 LVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER- 318
L+S G + ++ I +LID ++K G L +A +F M +R
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 319 ---NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGE 375
N+ T+N++I +H +EA +F M + +PD VT+ +++ V +G
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 376 RYFSLMTEH 384
F M+
Sbjct: 401 ELFRDMSRR 409
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 159/359 (44%), Gaps = 26/359 (7%)
Query: 46 RIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA----PDSFTWNVMIRGCTLSG 101
R++ G D V ++ C G+ + A + +++ D ++ +I
Sbjct: 195 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYR 254
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGR---AVHALA--IKMRFWGD 156
+ AL LF EM KG PD FTY +I +C+ ++GR A L+ ++ + +
Sbjct: 255 HVDDALNLFTEMDNKGIRPDVFTYSSLI-SCLC----NYGRWSDASRLLSDMLERKINPN 309
Query: 157 TYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSV----VSWTTLIAGLIACGKVDRAREVFD 212
N++++ + K G + K+FD+M S+ V++ +LI G ++D A+++F
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369
Query: 213 EMPSKN----VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMG 268
M SK+ VV++ +I+G+ K ++ V+ +LF M + N T +L+ +
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429
Query: 269 SLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT----ERNLATWN 324
+ + + +G+ L+D K G L+ A +VF + E ++ T+N
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYN 489
Query: 325 TMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTE 383
M + G E+ DLF + V PD + + ++S EE F M E
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 179/424 (42%), Gaps = 70/424 (16%)
Query: 33 NC-CNFKQLK---QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQI----NA 84
NC C QL + G++++ G V L LL C +++ A + DQ+
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAV 144
PD+ T+ ++ G A+ L + M++KG PD TY VI D +
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 145 HALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM--RGC--SVVSWTTLIAGLIA 200
K + D + +T+++ K + +D +F +M +G V ++++LI+ L
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 201 CGKVDRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFT 256
G+ A + +M + NVV++ ++ID + K + +EA LF+ M ++ PN T
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 347
Query: 257 LVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT 316
SL++ G +HD LD+A +F +M
Sbjct: 348 YNSLIN----------GFCMHD-------------------------RLDEAQQIFTLMV 372
Query: 317 ER----NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVE 372
+ ++ T+NT+I + ++LF++M + +V + VT+ ++ D +
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 373 EGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSLSMKTNQNVVELLQ 432
+ F M G+ P + Y +++ + +L E+AM V E LQ
Sbjct: 433 NAQMVFKQMVSD-GVHPNIMTYNTLLDGLCKNGKL------EKAMV--------VFEYLQ 477
Query: 433 ESKL 436
+SK+
Sbjct: 478 KSKM 481
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 151/341 (44%), Gaps = 19/341 (5%)
Query: 51 GLTHDQVLLRKLLQHSCAYGKMNYASLVFD-----QINAPDSFTWNVMIRGCTLSGSPEH 105
G+ D L+ C YG+ + AS + +IN P+ T+N +I G
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN-PNVVTFNSLIDAFAKEGKLIE 328
Query: 106 ALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMN 165
A LF EM+ + P+ TY +I + D + + L + D NT++N
Sbjct: 329 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIN 388
Query: 166 FYFKCGNEEDGCKVFDKM--RGC--SVVSWTTLIAGLIACGKVDRAREVFDEMPSK---- 217
+ K DG ++F M RG + V++TTLI G D A+ VF +M S
Sbjct: 389 GFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP 448
Query: 218 NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIH 277
N++++ ++DG K + +A +FE +Q + P+ +T + + G ++ G +
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508
Query: 278 DYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTMITSLGVH 333
G++ +I + K G ++A+ +F M E + T+NT+I +
Sbjct: 509 CSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRD 568
Query: 334 GLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEG 374
G + +L KEM DA T+ G+++ +H +++G
Sbjct: 569 GDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDKG 608
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 41 KQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA----PDSFTWNVMIRG 96
+ V +++ G+ + + LL C GK+ A +VF+ + PD +T+N+M G
Sbjct: 435 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEG 494
Query: 97 CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWG- 155
+G E LF + LKG PD Y +I + L IKM+ G
Sbjct: 495 MCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKG---LKEEAYTLFIKMKEDGP 551
Query: 156 --DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSV---VSWTTLIAGLIACGKVDRA 207
D+ NT++ + + G++ ++ +MR C S L+ ++ G++D+
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKG 608
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 152/352 (43%), Gaps = 19/352 (5%)
Query: 76 SLVFDQINAPDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIAS 135
SLV D AP+ T+ +I G G + A LFK M +G PD Y +I +
Sbjct: 275 SLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKA 334
Query: 136 NAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM--RGCS--VVSW 191
G + + A+ D V ++ ++ Y K G+ V+ +M +G S VV++
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY 394
Query: 192 TTLIAGLIACGKVDRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQI 247
T LI GL G++ A ++ ++ + ++V+++++IDG+ KC F L+E M
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 248 ENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDD 307
P+ LV ++ G + + I L + +LID + + D+
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDE 514
Query: 308 AWIVFGIM----TERNLATWNTMIT------SLGVHGLSEEALDLFKEMEKANVVPDAVT 357
A VF +M + ++AT+ T++ + H L LF M++ + D
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAV 574
Query: 358 FVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDSELDE 409
V+ H +E+ ++F+ + E + P + Y M+ Y LDE
Sbjct: 575 CNVVIHLLFKCHRIEDASKFFNNLIEG-KMEPDIVTYNTMICGYCSLRRLDE 625
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 147/364 (40%), Gaps = 56/364 (15%)
Query: 100 SGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYV 159
SG A V++K ML +G +P+ TY +IK ++ +K
Sbjct: 369 SGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVT 428
Query: 160 QNTMMNFYFKCGNEEDGCKVFDKMRGCS----VVSWTTLIAGLIACGKVDRAREVFDEMP 215
+++++ + KCGN G +++ M VV + L+ GL G + A +M
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML 488
Query: 216 SK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPN--EFTLVSLVSA-----C 264
+ NVV + ++IDG+ + R EA +F M I ++P+ FT V VS C
Sbjct: 489 GQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFC 548
Query: 265 TEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTE----RNL 320
M +G + D +N I + +I + KC ++DA F + E ++
Sbjct: 549 KHMKP-TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 607
Query: 321 ATWNTMI---------------------TSLG---------VHGLSEE-----ALDLFKE 345
T+NTMI T G +H L + A+ +F
Sbjct: 608 VTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSI 667
Query: 346 MEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVELYTGDS 405
M + P+AVT+ ++ D+E + F M E GISP + Y +++
Sbjct: 668 MAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK-GISPSIVSYSIIIDGLCKRG 726
Query: 406 ELDE 409
+DE
Sbjct: 727 RVDE 730
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 149/371 (40%), Gaps = 42/371 (11%)
Query: 33 NCCNFKQLKQVHGRIIRSGLTHD----QVLLRKLLQHSCAYGKMNYASLVFDQINAPDSF 88
C N + ++ +I+ G D VL+ L + M ++ + Q +
Sbjct: 438 KCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVV 497
Query: 89 TWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAF------DFGR 142
+N +I G + AL +F+ M + G PD T+ V++ I +AF G
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGL 557
Query: 143 AVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACG 202
+ L + + D V N +++ FKC ED K F+ LI G +
Sbjct: 558 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFN-----------NLIEGKM--- 603
Query: 203 KVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVS 262
++V++ MI GY +R EA +FE +++ PN TL L+
Sbjct: 604 -------------EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 650
Query: 263 ACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLA- 321
+ + + + G + L+D +SK ++ ++ +F M E+ ++
Sbjct: 651 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 710
Query: 322 ---TWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYF 378
+++ +I L G +EA ++F + A ++PD V + ++ + + E +
Sbjct: 711 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLY 770
Query: 379 SLMTEHYGISP 389
M + G+ P
Sbjct: 771 EHMLRN-GVKP 780
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 18/221 (8%)
Query: 196 AGLIACGKVDRAREV-------------FDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLF 242
G+++C KV + V D P+ NVV++ +I+G+ K AFDLF
Sbjct: 250 VGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLF 309
Query: 243 EGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKC 302
+ M+ + P+ +L+ + G L +G + A+ G++L + ++ ID+Y K
Sbjct: 310 KVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKS 369
Query: 303 GSLDDAWIVFGIM----TERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTF 358
G L A +V+ M N+ T+ +I L G EA ++ ++ K + P VT+
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429
Query: 359 VGVLSACVHMHDVEEGERYFSLMTEHYGISPILEHYVCMVE 399
++ ++ G + M + G P + Y +V+
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIK-MGYPPDVVIYGVLVD 469
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 10/203 (4%)
Query: 85 PDSFTWNVMIRG-CTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRA 143
PD T+N MI G C+L E A +F+ + + F P+ T +I +N D
Sbjct: 605 PDIVTYNTMICGYCSLRRLDE-AERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 663
Query: 144 VHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMR----GCSVVSWTTLIAGLI 199
+ ++ + + +M+++ K + E K+F++M+ S+VS++ +I GL
Sbjct: 664 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 723
Query: 200 ACGKVDRAREVF----DEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEF 255
G+VD A +F D +VV++ +I GY K R VEA L+E M V+P++
Sbjct: 724 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Query: 256 TLVSLVSACTEMGSLKLGKWIHD 278
+L + G W+HD
Sbjct: 784 LQRALSEYNPPKWLMSKGVWVHD 806
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 173/405 (42%), Gaps = 32/405 (7%)
Query: 34 CCNFKQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYA-SLVFDQINA---PDSFT 89
C V G++++ G V LL C ++ A SLV + + P+
Sbjct: 119 CSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVV 178
Query: 90 WNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKA-CIASNAFDFGRAVHALA 148
+N +I G +G AL L EM KG D TY ++ C + D R + +
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM- 237
Query: 149 IKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSV----VSWTTLIAGLIACGKV 204
+K D +++ + K GN ++ +++ +M SV V++ ++I GL G++
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297
Query: 205 DRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSL 260
A++ FD M SK NVV++ +I G+ K + E LF+ M E + FT +L
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTL 357
Query: 261 VSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKC--GSLDDAWIVFGIMTER 318
+ ++G L++ I + + + P + T I ++ C G ++ A + F M E
Sbjct: 358 IHGYCQVGKLRVALDIFCWMVSRRVT--PDIITHCILLHGLCVNGEIESALVKFDDMRES 415
Query: 319 ----NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEG 374
+ +N MI L E+A +LF + V PDA T+ ++ E
Sbjct: 416 EKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREA 475
Query: 375 ERYFSLMTEHYGISPILEHYVCMVELYTGDSELDEVYTSEEAMSL 419
+ M E E +C ++ D L+E +S + +SL
Sbjct: 476 DELIRRMKE--------EGIIC--QMNAEDDHLEEHSSSNKEISL 510
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 144/333 (43%), Gaps = 27/333 (8%)
Query: 86 DSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVH 145
D +++ ++I AL + +M+ G+ P T+ ++ N ++
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 146 ALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMR----GCSVVSWTTLIAGLIAC 201
L +K + + V NT+++ K G ++ ++M G VV++ TL+ GL
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 202 GK-VDRAREVFDEMP---SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTL 257
G+ D AR + D M + +VV++TA+ID +VK EA +L++ M +V PN T
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 258 VSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT- 316
S+++ G L K D G LI + K +D+ +F M+
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 317 ---ERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVL----------S 363
++ T+NT+I G ALD+F M V PD +T +L S
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 364 ACVHMHDVEEGERYFSLMTEHYGISPILEHYVC 396
A V D+ E E+Y ++ + I+ H +C
Sbjct: 405 ALVKFDDMRESEKYIGIVAYN-----IMIHGLC 432
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 4/172 (2%)
Query: 216 SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKW 275
S ++ S+T +I + +C R A + M P+ T SL+ + +
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162
Query: 276 IHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLA----TWNTMITSLG 331
+ +K+G E + LID K G L+ A + M ++ L T+NT++T L
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 332 VHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTE 383
G +A + ++M K ++ PD VTF ++ V +++E + + M +
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 137/321 (42%), Gaps = 47/321 (14%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSG 101
QVH I++S + + +LL + G+++ +FD++ D +W ++ GC G
Sbjct: 111 QVH--IMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMG 168
Query: 102 SPEHALVLFKEMLLKGFAPDKFTYPF-----VIKACIASNAFDFGRAVHALAIKMRFWG- 155
E A LF M LK F P V+KAC F+ G+ VHAL K+ F
Sbjct: 169 DYEDAAFLFVSM-LKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDE 227
Query: 156 -DTYVQNTMMNFY--FKCGNEEDGCKVFDKMRGCSVVSWTTLIAGLIACGKVDRAREVFD 212
D+Y+ +++ FY F+C ++ A V
Sbjct: 228 EDSYLSGSLIRFYGEFRC---------------------------------LEDANLVLH 254
Query: 213 EMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMG-SLK 271
++ + N V+W A + + E F M ++ N +++ AC+ + +
Sbjct: 255 QLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGR 314
Query: 272 LGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVF-GIMTERNLATWNTMITSL 330
G+ +H AIK G E + LI+MY K G + DA VF E +++ WN M+ S
Sbjct: 315 SGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASY 374
Query: 331 GVHGLSEEALDLFKEMEKANV 351
+G+ EA+ L +M+ +
Sbjct: 375 MQNGIYIEAIKLLYQMKATGI 395
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 8/179 (4%)
Query: 199 IACGKVDRAREVFDEMPSKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLV 258
++CG++D R++FD MP ++ SW + G ++ +A LF M +++ + F +
Sbjct: 134 VSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSM-LKHSQKGAFKIP 192
Query: 259 S-----LVSACTEMGSLKLGKWIHDYAIKNGI--ELGPFLGTALIDMYSKCGSLDDAWIV 311
S ++ AC + +LGK +H K G E +L +LI Y + L+DA +V
Sbjct: 193 SWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLV 252
Query: 312 FGIMTERNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHD 370
++ N W +T+ G +E + F EM + + F VL AC + D
Sbjct: 253 LHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSD 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 4/196 (2%)
Query: 36 NFKQLKQVHGRIIRSGLT--HDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVM 93
+F+ KQVH + G D L L++ + + A+LV Q++ ++ W
Sbjct: 208 DFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAK 267
Query: 94 IRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACI-ASNAFDFGRAVHALAIKMR 152
+ G + + F EM G + + V+KAC S+ G+ VHA AIK+
Sbjct: 268 VTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLG 327
Query: 153 FWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRG-CSVVSWTTLIAGLIACGKVDRAREVF 211
F D ++ ++ Y K G +D KVF + SV W ++A + G A ++
Sbjct: 328 FESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLL 387
Query: 212 DEMPSKNVVSWTAMID 227
+M + + + +++
Sbjct: 388 YQMKATGIKAHDTLLN 403
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 138/295 (46%), Gaps = 21/295 (7%)
Query: 86 DSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASN----AFDFG 141
D+ T+N++IRG G E AL L M G PD TY +I+ SN A +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 142 RAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSV----VSWTTLIAG 197
+ V + ++ D +M++ Y K G + + D M + V++ L+ G
Sbjct: 265 KDVKSGSV---CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDG 321
Query: 198 LIACGKVDRAREVFDEMPS----KNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPN 253
G++ A E+ +M S +VV++T++IDGY + + + F L+E M + PN
Sbjct: 322 YAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPN 381
Query: 254 EFTLVSLVSA-CTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVF 312
FT L++A C E LK + + A K+ I PF+ +ID + K G +++A ++
Sbjct: 382 AFTYSILINALCNENRLLKARELLGQLASKDIIP-QPFMYNPVIDGFCKAGKVNEANVIV 440
Query: 313 GIMTERNLA----TWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLS 363
M ++ T+ +I + G EA+ +F +M PD +T +LS
Sbjct: 441 EEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 136/298 (45%), Gaps = 16/298 (5%)
Query: 81 QINAPDSF-TWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFD 139
++N SF T+N++ R +G + A +F+ M G +P+ F++ +
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLH 155
Query: 140 FGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFD---KMRGCS-VVSWTTLI 195
F A+ L G V N+++N K ED K+FD + + C+ ++ LI
Sbjct: 156 FATAL--LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILI 213
Query: 196 AGLIACGKVDRAREVFDEMPS----KNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENV- 250
GL GK ++A E+ M ++V++ +I G+ K +A ++F+ ++ +V
Sbjct: 214 RGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVC 273
Query: 251 RPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWI 310
P+ T S++S + G ++ + D ++ GI L+D Y+K G + A
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 311 VFGIMTE----RNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSA 364
+ G M ++ T+ ++I G + L++EM + P+A T+ +++A
Sbjct: 334 IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 100/224 (44%), Gaps = 13/224 (5%)
Query: 51 GLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA-----PDSFTWNVMIRGCTLSGSPEH 105
G D V L+Q C ++N AS +F + + PD T+ MI G +G
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 106 ALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMN 165
A L +ML G P T+ ++ + + I + D ++++
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 166 FYFKCGNEEDGCKVFDKM--RGC--SVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVS 221
Y + G G +++++M RG + +++ LI L ++ +ARE+ ++ SK+++
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP 415
Query: 222 ----WTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLV 261
+ +IDG+ K + EA + E M+ + +P++ T L+
Sbjct: 416 QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 138/295 (46%), Gaps = 21/295 (7%)
Query: 86 DSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASN----AFDFG 141
D+ T+N++IRG G E AL L M G PD TY +I+ SN A +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 142 RAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSV----VSWTTLIAG 197
+ V + ++ D +M++ Y K G + + D M + V++ L+ G
Sbjct: 265 KDVKSGSV---CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDG 321
Query: 198 LIACGKVDRAREVFDEMPS----KNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPN 253
G++ A E+ +M S +VV++T++IDGY + + + F L+E M + PN
Sbjct: 322 YAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPN 381
Query: 254 EFTLVSLVSA-CTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVF 312
FT L++A C E LK + + A K+ I PF+ +ID + K G +++A ++
Sbjct: 382 AFTYSILINALCNENRLLKARELLGQLASKDIIP-QPFMYNPVIDGFCKAGKVNEANVIV 440
Query: 313 GIMTERNLA----TWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLS 363
M ++ T+ +I + G EA+ +F +M PD +T +LS
Sbjct: 441 EEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 136/298 (45%), Gaps = 16/298 (5%)
Query: 81 QINAPDSF-TWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFD 139
++N SF T+N++ R +G + A +F+ M G +P+ F++ +
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLH 155
Query: 140 FGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFD---KMRGCS-VVSWTTLI 195
F A+ L G V N+++N K ED K+FD + + C+ ++ LI
Sbjct: 156 FATAL--LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILI 213
Query: 196 AGLIACGKVDRAREVFDEMPS----KNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENV- 250
GL GK ++A E+ M ++V++ +I G+ K +A ++F+ ++ +V
Sbjct: 214 RGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVC 273
Query: 251 RPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWI 310
P+ T S++S + G ++ + D ++ GI L+D Y+K G + A
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 311 VFGIMTE----RNLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSA 364
+ G M ++ T+ ++I G + L++EM + P+A T+ +++A
Sbjct: 334 IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 100/224 (44%), Gaps = 13/224 (5%)
Query: 51 GLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA-----PDSFTWNVMIRGCTLSGSPEH 105
G D V L+Q C ++N AS +F + + PD T+ MI G +G
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 106 ALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMN 165
A L +ML G P T+ ++ + + I + D ++++
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 166 FYFKCGNEEDGCKVFDKM--RGC--SVVSWTTLIAGLIACGKVDRAREVFDEMPSKNVVS 221
Y + G G +++++M RG + +++ LI L ++ +ARE+ ++ SK+++
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP 415
Query: 222 ----WTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLV 261
+ +IDG+ K + EA + E M+ + +P++ T L+
Sbjct: 416 QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 155/333 (46%), Gaps = 20/333 (6%)
Query: 46 RIIRSGLTHD-QVLLRKLLQHSCAYGKMNYASLVFDQINA-----PDSFTWNVMIRGCTL 99
R++ +G+ D +L ++++SC + ++ A +F++ P T+N++I G
Sbjct: 738 RLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLE 797
Query: 100 SGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYV 159
+ E A +F ++ G PD TY F++ A S D ++ +T
Sbjct: 798 ADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTIT 857
Query: 160 QNTMMNFYFKCGNEEDGCKVF-----DKMRGCSVVSWTTLIAGLIACGKVDRAREVFDEM 214
N +++ K GN +D ++ D+ + ++ LI GL G++ A+++F+ M
Sbjct: 858 HNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM 917
Query: 215 PS----KNVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSL 270
N + +I+G+ K A LF+ M E VRP+ T LV +G +
Sbjct: 918 LDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRV 977
Query: 271 KLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM-TER----NLATWNT 325
G ++G+ +I+ K L++A ++F M T R +L T+N+
Sbjct: 978 DEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNS 1037
Query: 326 MITSLGVHGLSEEALDLFKEMEKANVVPDAVTF 358
+I +LG+ G+ EEA ++ E+++A + P+ TF
Sbjct: 1038 LILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTF 1070
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 149/337 (44%), Gaps = 24/337 (7%)
Query: 42 QVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA----PDSFTWNVMIRGC 97
++ R+ G D V L+ C K++ A VF+++ PD T+ ++
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRF 338
Query: 98 TLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKA-CIASNAFDFGRAVHALAIKMRFWG- 155
+ + + + EM G PD T+ ++ A C A N FG A L + MR G
Sbjct: 339 SDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGN---FGEAFDTLDV-MRDQGI 394
Query: 156 --DTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSV----VSWTTLIAGLIACGKVDRARE 209
+ + NT++ + +D ++F M V ++ I G A E
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 210 VFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACT 265
F++M +K N+V+ A + K R EA +F G++ + P+ T ++ +
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 266 EMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNL----A 321
++G + + ++NG E + +LI+ K +D+AW +F M E L
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 322 TWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTF 358
T+NT++ LG +G +EA++LF+ M + P+ +TF
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF 611
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 147/346 (42%), Gaps = 37/346 (10%)
Query: 70 GKMNYASLVFDQIN----APDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTY 125
GK+N A + +++ PD T+ V+I + + A +F++M PD+ TY
Sbjct: 272 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTY 331
Query: 126 PFVIKACIASNAFDFGRAVHALAIKMRFWG---------DTYVQNTMMNFYFKCGNEEDG 176
++ + F R + ++ +FW D +++ K GN +
Sbjct: 332 ITLL------DRFSDNRDLDSVK---QFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEA 382
Query: 177 CKVFDKMRGCSVV----SWTTLIAGLIACGKVDRAREVFDEMPSKNV----VSWTAMIDG 228
D MR ++ ++ TLI GL+ ++D A E+F M S V ++ ID
Sbjct: 383 FDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDY 442
Query: 229 YVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKN-GIEL 287
Y K V A + FE M+ + + PN + + + + G + K I Y +K+ G+
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF-YGLKDIGLVP 501
Query: 288 GPFLGTALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTMITSLGVHGLSEEALDLF 343
++ YSK G +D+A + M E ++ N++I +L +EA +F
Sbjct: 502 DSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMF 561
Query: 344 KEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISP 389
M++ + P VT+ +L+ ++E F M + G P
Sbjct: 562 MRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK-GCPP 606
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 169/397 (42%), Gaps = 63/397 (15%)
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFT----YPFVIKACIASNAF-- 138
PD FT+N +I G +G + A+ F +M K PD T P V+KA + +A+
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKI 699
Query: 139 ------------------DFGRAV-------HALAIKMRFWGDTYVQN------TMMNFY 167
D ++ +A++ R + ++ ++ +
Sbjct: 700 ITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYS 759
Query: 168 FKCGNEEDGCKVFDKMRG-----CSVVSWTTLIAGLIACGKVDRAREVFDEMPS----KN 218
K N +F+K + ++ LI GL+ ++ A++VF ++ S +
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 219 VVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHD 278
V ++ ++D Y K + E F+L++ M N T ++S + G++ ++
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY- 878
Query: 279 YAIKNGIELGPFLGT--ALIDMYSKCGSLDDAWIVFGIMTER----NLATWNTMITSLGV 332
Y + + + P T LID SK G L +A +F M + N A +N +I G
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 333 HGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFSLMTEHYGISPILE 392
G ++ A LFK M K V PD T+ ++ + V+EG YF + E G++P
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES-GLNP--- 994
Query: 393 HYVCMVELYTGDSELDEVYTSEEAMSL--SMKTNQNV 427
VC + G L + + EEA+ L MKT++ +
Sbjct: 995 DVVCYNLIING---LGKSHRLEEALVLFNEMKTSRGI 1028
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 149/392 (38%), Gaps = 70/392 (17%)
Query: 48 IRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWNVMIRGCTLSGSPEHAL 107
++ GL LRK+ + +Y L+ + + R CT A+
Sbjct: 165 VKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKS----------RFCT------EAM 208
Query: 108 VLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWG---DTYVQNTMM 164
+++ M+L+GF P TY ++ D +V L +M G + Y +
Sbjct: 209 EVYRRMILEGFRPSLQTYSSLMVGLGKRRDID---SVMGLLKEMETLGLKPNVYTFTICI 265
Query: 165 NFYFKCGNEEDGCKVFDKM--RGCS--VVSWTTLIAGLIACGKVDRAREVFDEMPS---- 216
+ G + ++ +M GC VV++T LI L K+D A+EVF++M +
Sbjct: 266 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHK 325
Query: 217 -----------------------------------KNVVSWTAMIDGYVKCQRPVEAFDL 241
+VV++T ++D K EAFD
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT 385
Query: 242 FEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSK 301
+ M+ + + PN T +L+ + L + G++ + ID Y K
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 302 CGSLDDAWIVFGIMTER----NLATWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVT 357
G A F M + N+ N + SL G EA +F ++ +VPD+VT
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505
Query: 358 FVGVLSACVHMHDVEEGERYFSLMTEHYGISP 389
+ ++ + +++E + S M E+ G P
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMEN-GCEP 536
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 108/240 (45%), Gaps = 10/240 (4%)
Query: 86 DSFTWNVMIRGCTLSGSPEHALVLFKEMLL-KGFAPDKFTYPFVIKACIASNAFDFGRAV 144
++ T N++I G +G+ + AL L+ +++ + F+P TY +I S + +
Sbjct: 854 NTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL 913
Query: 145 HALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV----SWTTLIAGLIA 200
+ + + N ++N + K G + C +F +M V +++ L+ L
Sbjct: 914 FEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM 973
Query: 201 CGKVDRAREVFDEMP----SKNVVSWTAMIDGYVKCQRPVEAFDLFEGMQI-ENVRPNEF 255
G+VD F E+ + +VV + +I+G K R EA LF M+ + P+ +
Sbjct: 974 VGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLY 1033
Query: 256 TLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM 315
T SL+ G ++ I++ + G+E F ALI YS G + A+ V+ M
Sbjct: 1034 TYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 122/312 (39%), Gaps = 14/312 (4%)
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAV 144
P+ +T+ + IR +G A + K M +G PD TY +I A + D + V
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV 315
Query: 145 HALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVF-DKMRG----CSVVSWTTLIAGLI 199
R D T+++ F + D K F +M VV++T L+ L
Sbjct: 316 FEKMKTGRHKPDRVTYITLLD-RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALC 374
Query: 200 ACGKVDRAREVFDEMPSKNVV----SWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEF 255
G A + D M + ++ ++ +I G ++ R +A +LF M+ V+P +
Sbjct: 375 KAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAY 434
Query: 256 TLVSLVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVFGIM 315
T + + + G + GI A + +K G +A +F +
Sbjct: 435 TYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL 494
Query: 316 TERNLA----TWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDV 371
+ L T+N M+ G +EA+ L EM + PD + +++ V
Sbjct: 495 KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 554
Query: 372 EEGERYFSLMTE 383
+E + F M E
Sbjct: 555 DEAWKMFMRMKE 566
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 9/181 (4%)
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAV 144
P+ +N++I G +G + A LFK M+ +G PD TY ++ D G
Sbjct: 924 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 983
Query: 145 HALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM---RGCS--VVSWTTLIAGLI 199
+ D N ++N K E+ +F++M RG + + ++ +LI L
Sbjct: 984 FKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLG 1043
Query: 200 ACGKVDRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEF 255
G V+ A ++++E+ NV ++ A+I GY +P A+ +++ M PN
Sbjct: 1044 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTG 1103
Query: 256 T 256
T
Sbjct: 1104 T 1104
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 51 GLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINA----PDSFTWNVMIRGCTLSGSPEHA 106
G+T D L+ + G + A ++++I P+ FT+N +IRG +LSG PEHA
Sbjct: 1027 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHA 1086
Query: 107 LVLFKEMLLKGFAPDKFTY 125
+++ M+ GF+P+ TY
Sbjct: 1087 YAVYQTMVTGGFSPNTGTY 1105
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 159/430 (36%), Gaps = 99/430 (23%)
Query: 58 LLRKLLQHSCAYGKMNYASLVF-----DQIN--------------APDSFTWNVMIRGCT 98
LLR + +H C + Y +L+ +++N PD+ T+N +I G
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 99 LSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFD----------------FGR 142
A + ML++GFAPD TY +++ D F
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNT 358
Query: 143 AVHALAIKMRF-------------WG---DTYVQNTMMNFYFKCGNEEDGCKVFDKMR-- 184
+H R +G D N+++ Y+K G +V MR
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 185 GC--SVVSWTTLIAGLIACGKVDRAREVFDEMPS----KNVVSWTAMIDGYVKCQRPVEA 238
GC +V S+T L+ G GK+D A V +EM + N V + +I + K R EA
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 239 FDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGI------------- 285
++F M + +P+ +T SL+S E+ +K W+ I G+
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 286 ----------------------ELGPFLGTALIDMYSKCGSLDDAWIVFGIMTERNLA-- 321
L +LI + G +D A +F M A
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Query: 322 --TWNTMITSLGVHGLSEEALDLFKEMEKANVVPDAVTFVGVLSACVHMHDVEEGERYFS 379
+ N +I L G+ EEA++ KEM PD VTF +++ +E+G F
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 658
Query: 380 LMTEHYGISP 389
+ GI P
Sbjct: 659 KLQAE-GIPP 667
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 153/383 (39%), Gaps = 57/383 (14%)
Query: 35 CNFKQLKQVH---GRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQINAPDSFTWN 91
C F ++ + R++ G D + L+ C G+++ A +F +I P+ +N
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFN 357
Query: 92 VMIRGCTLSGSPEHALVLFKEMLLK-GFAPDKFTYPFVIKACIASNAFDFGRAVHALAIK 150
+I G G + A + +M+ G PD TY +I G A+ L
Sbjct: 358 TLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLV--GLALEVLH-D 414
Query: 151 MRFWG---DTYVQNTMMNFYFKCGNEEDGCKVFDKMRG----CSVVSWTTLIAGLIACGK 203
MR G + Y +++ + K G ++ V ++M + V + LI+ +
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 204 VDRAREVFDEMPSK----NVVSWTAMIDGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVS 259
+ A E+F EMP K +V ++ ++I G + A L M E V N T +
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 260 LVSACTEMGSLKLGKWIHDYAIKNGIELGPFLGTALIDMYSKCGSLDDAWIVF------- 312
L++A G +K + + + + G L +LI + G +D A +F
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 313 ------------------GIMTER--------------NLATWNTMITSLGVHGLSEEAL 340
G++ E ++ T+N++I L G E+ L
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 341 DLFKEMEKANVVPDAVTFVGVLS 363
+F++++ + PD VTF ++S
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMS 677
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 135/299 (45%), Gaps = 26/299 (8%)
Query: 62 LLQHSCAYGKMNYASLVFDQINA----PDSFTWNVMIRG-CTLSGSPEHALVLFKEMLLK 116
L+ C GK++ A V ++++A P++ +N +I C PE A+ +F+EM K
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPE-AVEIFREMPRK 488
Query: 117 GFAPDKFTYPFVIKACIASNAFDFGRAVHALAIKMRFWGDTYVQNTMMNFYFKCGNEEDG 176
G PD +T+ +I + + I +T NT++N + + G ++
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
Query: 177 CKVFDKM--RGCSV--VSWTTLIAGLIACGKVDRAREVFDEM------PSKNVVSWTAMI 226
K+ ++M +G + +++ +LI GL G+VD+AR +F++M PS +S +I
Sbjct: 549 RKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN--ISCNILI 606
Query: 227 DGYVKCQRPVEAFDLFEGMQIENVRPNEFTLVSLVSACTEMGSLKLGKWIHDYAIKNGIE 286
+G + EA + + M + P+ T SL++ G ++ G + GI
Sbjct: 607 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 666
Query: 287 LGPFLGTALIDMYSKCGSLDDAWIVFGIMTE----RNLATWNTMITSLGVHGLSEEALD 341
L+ K G + DA ++ E N TW+ ++ S+ + +E LD
Sbjct: 667 PDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI----IPQETLD 721
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 140/333 (42%), Gaps = 46/333 (13%)
Query: 85 PDSFTWNVMIRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFGRAV 144
P ++NV++ + A +F +ML + P FT+ V+KA A N D ++
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 145 HALAIKMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKM--RGCSV-------------- 188
K ++ + T+++ KC + ++ ++M GC
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 189 -----------------------VSWTTLIAGLIACGKVDRAREVFDEMPSKNVVSWTAM 225
+++ L+ GL G+VD A+++F +P +V + +
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTL 359
Query: 226 IDGYVKCQRPVEAFDLFEGMQIE-NVRPNEFTLVSLVSACTEMGSLKLG-KWIHDYAIKN 283
I G+V R +A + M + P+ T SL+ + G + L + +HD K
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK- 418
Query: 284 GIELGPFLGTALIDMYSKCGSLDDAWIVFGIMT----ERNLATWNTMITSLGVHGLSEEA 339
G + + T L+D + K G +D+A+ V M+ + N +N +I++ EA
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 340 LDLFKEMEKANVVPDAVTFVGVLSACVHMHDVE 372
+++F+EM + PD TF ++S + +++
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 16/183 (8%)
Query: 38 KQLKQVHGRIIRSGLTHDQVLLRKLLQHSCAYGKMNYASLVFDQI----NAPDSFTWNVM 93
K+ +++ ++ G D++ L++ C G+++ A +F+++ +AP + + N++
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL 605
Query: 94 IRGCTLSGSPEHALVLFKEMLLKGFAPDKFTYPFVIKACIASNAFDFG----RAVHALAI 149
I G SG E A+ KEM+L+G PD T+ +I + + G R + A I
Sbjct: 606 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Query: 150 KMRFWGDTYVQNTMMNFYFKCGNEEDGCKVFDKMRGCSVV----SWTTLIAGLIACGKVD 205
DT NT+M++ K G D C + D+ V +W+ L+ +I +D
Sbjct: 666 P----PDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
Query: 206 RAR 208
R R
Sbjct: 722 RRR 724