Miyakogusa Predicted Gene

Lj1g3v3943540.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3943540.1 Non Chatacterized Hit- tr|B6T678|B6T678_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,26.87,0.000000000003,DUF761,Protein of unknown function DUF761,
plant; seg,NULL,CUFF.31523.1
         (205 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G13880.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   123   1e-28
AT5G47920.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   122   1e-28

>AT5G13880.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G47920.1); Has 30201 Blast hits to 17322
           proteins in 780 species: Archae - 12; Bacteria - 1396;
           Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
           0; Other Eukaryotes - 2996 (source: NCBI BLink). |
           chr5:4477477-4478043 REVERSE LENGTH=188
          Length = 188

 Score =  123 bits (308), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/191 (39%), Positives = 105/191 (54%), Gaps = 17/191 (8%)

Query: 7   RTSRLLKQFIAGLSSMAKSKTLALKSKTNAIKARLIIFSLMKNKKFLMSSFTEKFNSLFG 66
           + S  +KQ I  L+ +AK KT  LK KT A K RL+IFSL+ N+  ++ S + K  S   
Sbjct: 3   KASDFVKQIINMLTCLAKDKTKELKRKTRAFKTRLVIFSLLHNRHMVVGSLSHKLKS--- 59

Query: 67  GNHSQANEDCLLEDGSSSISR-AIVLYNNNAHTYEALPNPCESHECGCENEGHFGYGXXX 125
            N +    D   +D      +  +V+Y+ N +   + P            +  +      
Sbjct: 60  -NQTSKKIDHDNKDVQDYHDKNMVVVYSQNVNAMSSTP-------VSPHVQYQYTEEEDD 111

Query: 126 XXXXXXKYPDLTHCLFDSEGLDLGGSVIDIVKHSKEEAGQEFKLEDEIDQVADLFIKKFR 185
                 KYPDL H LF++EG     SVI++VKHSKE+ G+EF+LEDEID+VADLFI +F 
Sbjct: 112 EEGEEEKYPDLRHSLFEAEG-----SVIEMVKHSKEDNGEEFRLEDEIDKVADLFITRFH 166

Query: 186 RQMILQKQDSL 196
           RQM LQKQ SL
Sbjct: 167 RQMWLQKQLSL 177


>AT5G47920.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G13880.1); Has 1807 Blast hits to 1807 proteins
           in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
           Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
           - 339 (source: NCBI BLink). | chr5:19403458-19404021
           REVERSE LENGTH=187
          Length = 187

 Score =  122 bits (307), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/206 (43%), Positives = 121/206 (58%), Gaps = 33/206 (16%)

Query: 4   MKNRTSRLLKQFIAGLSSMAKSKTLALKSKTNAIKARLIIFSLMKNKKFLMSSFTEKFNS 63
           MK  T+ L+K  +A LSSMAK+K++A+K+KT+A K R+++ SL+K+KK    S + K + 
Sbjct: 1   MKKATA-LMKHIVALLSSMAKAKSIAIKNKTSAFKTRVLMLSLVKHKKLGFRSISNKIHH 59

Query: 64  LFGGNHSQANEDCLLEDGSSSISRAIVLYNNNAHTYEALPNPCESHECGCENEGHFGYGX 123
           L G  H+  ++D    D     ++AIVLYN+ A T  A     + HE   +         
Sbjct: 60  LLG--HADQDDDN---DQDQDKNKAIVLYNSKASTM-AHHEEYDVHEEESD--------- 104

Query: 124 XXXXXXXXKYPDLTHCLFDSE---GLDL-----GGSVIDIVKHSKEEAGQEFKLEDEIDQ 175
                   KYPDL H LF+ E   G DL     G SVID+V+ SKEE G+ FKLEDEID 
Sbjct: 105 --------KYPDLRHTLFEGEEDFG-DLEEEGQGSSVIDMVRTSKEEEGENFKLEDEIDH 155

Query: 176 VADLFIKKFRRQMILQKQDSLKRKRE 201
           VADLFI +F +QM LQK  S KR +E
Sbjct: 156 VADLFISRFHKQMKLQKLLSFKRYQE 181