Miyakogusa Predicted Gene

Lj1g3v3918170.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3918170.2 tr|G7K407|G7K407_MEDTR Chitinase
domain-containing protein OS=Medicago truncatula GN=MTR_5g025480
PE,78.38,0,Glyco_hydro_18,Glycoside hydrolase, family 18, catalytic
domain; no description,Glycoside hydrolase,,CUFF.31507.2
         (433 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G01040.1 | Symbols:  | Glycosyl hydrolase superfamily protein...   555   e-158

>AT4G01040.1 | Symbols:  | Glycosyl hydrolase superfamily protein |
           chr4:453383-455407 FORWARD LENGTH=430
          Length = 430

 Score =  555 bits (1431), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 271/434 (62%), Positives = 330/434 (76%), Gaps = 5/434 (1%)

Query: 1   MAKKRDHRSAPSSGHRENRFQPPSRRNQRTDSTASSRSKLIALFIVSSVIAIVAYWLRQS 60
           MA++R   +A S   R + ++   +  Q+ DS     +  +  FIV   ++I  Y ++ +
Sbjct: 1   MARRRRSSAAESLKRRNDGYESLCQVVQQ-DSDRRLITIFVIFFIVIPAVSIAVYKVKFA 59

Query: 61  SPSQSKHKESYVYQRGLVTTDANYQDIVTENSNVPENSSHRHYTYPVLGYITPWNSRGYE 120
              +    ES + Q+G+V TD N+Q+I+TE+S   ENS+ RHY YPVL YITPWNS+GY+
Sbjct: 60  D--RVIQTESSIRQKGIVKTDINFQEILTEHSKASENST-RHYDYPVLAYITPWNSKGYD 116

Query: 121 LAKRFNSKFTHLSPVWYDLKSQQSSLVLEGRHNADRGWISDLRKAGEALILPRFVLEASP 180
           +AK FNSKFTHLSPVWYDLKSQ S LVLEGRHNAD+GWI +LR  G ALILPR VLEA P
Sbjct: 117 MAKIFNSKFTHLSPVWYDLKSQGSGLVLEGRHNADKGWIQELRSRGNALILPRVVLEAIP 176

Query: 181 AELLGKKKQRNKAINLIVTECKEMGYDGIVLESWSRWAAFGILHDPDMRNLALQFVQQLG 240
            E+L KKK R KAI+LIVTECKEM Y+GIVLESWSRWAA+G+LHDPD+R +AL+FV+QLG
Sbjct: 177 GEMLNKKKLREKAISLIVTECKEMEYNGIVLESWSRWAAYGVLHDPDLRKMALKFVKQLG 236

Query: 241 DALHSISSEKNSGQPLQLVYVIGPPSSEKLQEHDFGPRDLETLSGAVDGFSLMTYDFSNP 300
           DALHS SS +N+ Q +Q +YV+GPP SEKLQ +DFGP DL+ L  +VDGFSLMTYDFSNP
Sbjct: 237 DALHSTSSPRNNQQHMQFMYVVGPPRSEKLQMYDFGPEDLQFLKDSVDGFSLMTYDFSNP 296

Query: 301 HNPGPNAPLKWXXXXXXXXXGTSSSRAQSVAPKILLGINFYGNDFSLSKDS-GGGAITGR 359
            NPGPNAP+KW         G+S++   ++A K+LLGINFYGNDF +S DS GGGAITGR
Sbjct: 297 QNPGPNAPVKWIDLTLKLLLGSSNNIDSNIARKVLLGINFYGNDFVISGDSGGGGAITGR 356

Query: 360 DYLALLEKHRPLLQWDNNSGEHVFFYTDDKGIKHAVFYPSLKSISLRLEEAHSWGCGISI 419
           DYLALL+KH+P  +WD  SGEH+F Y DDK IKHAVFYP+L SI LRLE A  WG GISI
Sbjct: 357 DYLALLQKHKPTFRWDKESGEHLFMYRDDKNIKHAVFYPTLMSILLRLENARLWGIGISI 416

Query: 420 WEIGQGLDYFFDLL 433
           WEIGQGLDYFFDLL
Sbjct: 417 WEIGQGLDYFFDLL 430