Miyakogusa Predicted Gene

Lj1g3v3918090.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3918090.1 NODE_39948_length_682_cov_133.857773.path4.1
         (164 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G09620.1 | Symbols:  | ATP binding;leucine-tRNA ligases;amino...   295   9e-81

>AT1G09620.1 | Symbols:  | ATP binding;leucine-tRNA
           ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP
           binding;aminoacyl-tRNA ligases | chr1:3113077-3116455
           REVERSE LENGTH=1091
          Length = 1091

 Score =  295 bits (755), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 135/164 (82%), Positives = 152/164 (92%)

Query: 1   MKSVGIFDDEISKFQDPHKWLSYFPPLAVEDLKAFGLGCDWRRSFVTTDMNPYFDSFVRW 60
           M+S G+ D EI+ F++P +WL YFPPLAVEDL+A+GLGCDWRRSFVTTD+NP+FD+FVRW
Sbjct: 165 MRSFGLTDSEIANFREPSEWLYYFPPLAVEDLRAYGLGCDWRRSFVTTDVNPFFDAFVRW 224

Query: 61  QVRKLKSMGKIVKDVRHTIFSPLDGQPCADHDRATGEGVQPQEYTIIKMEVVAPFPPKFE 120
           Q+RKLKSMGKIVKD R+TIFSPLDGQPCADHDRATGEGVQPQEYT+IKMEVV PFP K  
Sbjct: 225 QMRKLKSMGKIVKDRRYTIFSPLDGQPCADHDRATGEGVQPQEYTLIKMEVVKPFPLKLG 284

Query: 121 VLEGKKVFLAAATLRPETMYGQTNAWVLPDGKYGAFEISDTEVF 164
            LEGK+VFLAAATLRPETMYGQTNAWVLPDGKYGA+EIS+TEVF
Sbjct: 285 PLEGKRVFLAAATLRPETMYGQTNAWVLPDGKYGAYEISETEVF 328