Miyakogusa Predicted Gene

Lj1g3v3918020.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3918020.1 Non Chatacterized Hit- tr|G7ZXM9|G7ZXM9_MEDTR
Putative uncharacterized protein (Fragment)
OS=Medicag,90.11,3.00018e-42,BEACH,BEACH domain; Beige/BEACH
domain,BEACH domain; no description,BEACH domain; Beach,BEACH
domain,CUFF.31498.1
         (91 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G45540.2 | Symbols:  | WD-40 repeat family protein / beige-re...   166   3e-42
AT2G45540.1 | Symbols:  | WD-40 repeat family protein / beige-re...   166   3e-42
AT1G58230.1 | Symbols:  | binding | chr1:21566331-21578865 FORWA...    96   4e-21
AT1G03060.1 | Symbols: SPI | Beige/BEACH domain ;WD domain, G-be...    81   1e-16
AT4G02660.1 | Symbols:  | Beige/BEACH domain ;WD domain, G-beta ...    81   1e-16

>AT2G45540.2 | Symbols:  | WD-40 repeat family protein / beige-related
            | chr2:18757881-18772229 REVERSE LENGTH=3001
          Length = 3001

 Score =  166 bits (421), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 77/91 (84%), Positives = 80/91 (87%)

Query: 1    MFSDISGTWNGVLEDMSDVKELVRELFYLPEVLTNENSIDFGTTQLGGKLDTVRLLAWAE 60
            MFSD  GTWNGVLEDMSDVKELV ELFYLPEVLTNENSIDFGTTQLG KLD V+L  WA+
Sbjct: 2414 MFSDFPGTWNGVLEDMSDVKELVPELFYLPEVLTNENSIDFGTTQLGEKLDAVKLPPWAK 2473

Query: 61   NPVDFVHTNRMVLESEYVSAHLHEWIDLIFG 91
            NPVDFVH  R  LESE+VSAHLHEWIDLIFG
Sbjct: 2474 NPVDFVHKQRRALESEHVSAHLHEWIDLIFG 2504


>AT2G45540.1 | Symbols:  | WD-40 repeat family protein / beige-related
            | chr2:18757881-18772229 REVERSE LENGTH=2946
          Length = 2946

 Score =  166 bits (420), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 77/91 (84%), Positives = 80/91 (87%)

Query: 1    MFSDISGTWNGVLEDMSDVKELVRELFYLPEVLTNENSIDFGTTQLGGKLDTVRLLAWAE 60
            MFSD  GTWNGVLEDMSDVKELV ELFYLPEVLTNENSIDFGTTQLG KLD V+L  WA+
Sbjct: 2359 MFSDFPGTWNGVLEDMSDVKELVPELFYLPEVLTNENSIDFGTTQLGEKLDAVKLPPWAK 2418

Query: 61   NPVDFVHTNRMVLESEYVSAHLHEWIDLIFG 91
            NPVDFVH  R  LESE+VSAHLHEWIDLIFG
Sbjct: 2419 NPVDFVHKQRRALESEHVSAHLHEWIDLIFG 2449


>AT1G58230.1 | Symbols:  | binding | chr1:21566331-21578865 FORWARD
            LENGTH=2604
          Length = 2604

 Score = 95.9 bits (237), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)

Query: 1    MFSDISGTWNGVLEDMSDVKELVRELFYLPEVLTNENSIDFGTTQLGGKLDTVRLLAWAE 60
            +F  + G++   L + SDVKEL+ E FY+PE L N NS   G  Q G  L  V L  WA+
Sbjct: 2075 LFQSVEGSFRNCLSNTSDVKELIPEFFYMPEFLVNSNSYHLGVKQDGEPLGEVCLPPWAK 2134

Query: 61   -NPVDFVHTNRMVLESEYVSAHLHEWIDLIFG 91
             +P  F+  NR  LESEYVS+HLH+WIDLIFG
Sbjct: 2135 GSPEMFIARNREALESEYVSSHLHDWIDLIFG 2166


>AT1G03060.1 | Symbols: SPI | Beige/BEACH domain ;WD domain, G-beta
            repeat protein | chr1:712971-726891 REVERSE LENGTH=3601
          Length = 3601

 Score = 81.3 bits (199), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/94 (47%), Positives = 57/94 (60%), Gaps = 3/94 (3%)

Query: 1    MFSDISGTWNGVLE--DMSDVKELVRELFYLPEVLTNENSIDFGTTQLGGKLDTVRLLAW 58
            +F+ I  TW       + SDVKEL+ E FY+PE L N  S+D G  Q G K+  V L  W
Sbjct: 3091 LFNSIKDTWLSAAGKGNTSDVKELIPEFFYMPEFLENRFSLDLGEKQSGEKVGDVFLPPW 3150

Query: 59   AENPV-DFVHTNRMVLESEYVSAHLHEWIDLIFG 91
            A   V +F+  +R  LES+YVS +LH WIDLIFG
Sbjct: 3151 ARGSVREFILKHREALESDYVSENLHHWIDLIFG 3184


>AT4G02660.1 | Symbols:  | Beige/BEACH domain ;WD domain, G-beta
            repeat protein | chr4:1159927-1173791 REVERSE LENGTH=3527
          Length = 3527

 Score = 80.9 bits (198), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 57/94 (60%), Gaps = 3/94 (3%)

Query: 1    MFSDISGTWNGVLE--DMSDVKELVRELFYLPEVLTNENSIDFGTTQLGGKLDTVRLLAW 58
            +F+ I  TW       + SDVKEL+ E FY+PE L N  ++D G  Q G K+  V L  W
Sbjct: 3035 LFNSIRETWLSAAGKGNTSDVKELIPEFFYMPEFLENRFNLDLGEKQSGDKVGDVILPPW 3094

Query: 59   AENPV-DFVHTNRMVLESEYVSAHLHEWIDLIFG 91
            A   V +F+  +R  LES+YVS +LH WIDLIFG
Sbjct: 3095 ARGSVREFIRKHREALESDYVSENLHHWIDLIFG 3128