Miyakogusa Predicted Gene

Lj1g3v3906720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3906720.1 tr|G7K3M7|G7K3M7_MEDTR Ferredoxin OS=Medicago
truncatula GN=MTR_5g006320 PE=4 SV=1,63.54,8e-17,
,NODE_49741_length_734_cov_251.583099.path2.1
         (90 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G14890.1 | Symbols: FdC2 | 2Fe-2S ferredoxin-like superfamily...    65   9e-12

>AT4G14890.1 | Symbols: FdC2 | 2Fe-2S ferredoxin-like superfamily
          protein | chr4:8520887-8521351 FORWARD LENGTH=154
          Length = 154

 Score = 65.1 bits (157), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 39/48 (81%), Gaps = 1/48 (2%)

Query: 43 LTVRSYKVVIEHEGQTTQLEVEPDETILSKALDSCLHDLPCSSSQWIC 90
          +  R+YKVV+EH+G+TT+LEVEPDETILSKALDS L D+P   +  +C
Sbjct: 48 IIARAYKVVVEHDGKTTELEVEPDETILSKALDSGL-DVPYDCNLGVC 94