Miyakogusa Predicted Gene
- Lj1g3v3904220.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3904220.1 Non Chatacterized Hit- tr|C0JP29|C0JP29_LOTJA
Putative basic helix-loop-helix protein BHLH23
OS=Lotu,100,0,coiled-coil,NULL; no description,Helix-loop-helix
domain; HLH,Helix-loop-helix domain; helix loop he,CUFF.31447.1
(451 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 387 e-108
AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 387 e-108
AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 387 e-108
AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHL... 339 3e-93
AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 | chr5:2623... 137 2e-32
AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 126 3e-29
AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH) DNA-b... 123 2e-28
AT5G65640.2 | Symbols: bHLH093 | beta HLH protein 93 | chr5:2623... 91 2e-18
AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29, ... 87 3e-17
AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 86 7e-17
AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 80 4e-15
AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 80 4e-15
AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 79 5e-15
AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 78 1e-14
AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 77 2e-14
AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHL... 77 4e-14
AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type tran... 76 4e-14
AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 76 5e-14
AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 75 7e-14
AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 75 1e-13
AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 73 5e-13
AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |... 71 1e-12
AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH) DNA-... 71 2e-12
AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 71 2e-12
AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 71 2e-12
AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 70 2e-12
AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 70 3e-12
AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 70 3e-12
AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 70 3e-12
AT1G10610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 68 1e-11
AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 67 3e-11
AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHL... 66 4e-11
AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 | ch... 66 4e-11
AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 2e-10
AT2G31220.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 2e-10
AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 2e-10
AT4G21330.1 | Symbols: DYT1 | basic helix-loop-helix (bHLH) DNA-... 63 5e-10
AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 59 7e-09
AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 59 7e-09
AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH) DNA-... 59 9e-09
AT1G06170.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 59 1e-08
AT1G06170.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 59 1e-08
AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 58 2e-08
AT2G31210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 57 4e-08
AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH) DNA-b... 55 7e-08
AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 55 7e-08
AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 55 7e-08
AT1G72210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 54 3e-07
AT1G22490.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 3e-07
AT4G28815.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 5e-07
AT2G31215.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 7e-07
AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 7e-07
AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 1e-06
AT4G38070.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 1e-06
AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH) DNA-b... 52 1e-06
AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH) DNA... 51 2e-06
AT2G40435.1 | Symbols: | BEST Arabidopsis thaliana protein matc... 50 2e-06
AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH) DNA-b... 50 3e-06
AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 3e-06
AT3G56220.1 | Symbols: | transcription regulators | chr3:208589... 50 3e-06
AT2G40200.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 4e-06
AT3G20640.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 6e-06
AT1G69010.1 | Symbols: BIM2 | BES1-interacting Myc-like protein ... 49 6e-06
>AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 387 bits (995), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/353 (63%), Positives = 248/353 (70%), Gaps = 45/353 (12%)
Query: 143 NASNSPALMGFSQGNQMGTLDLSS----------------------CSEFPPPGLELEGF 180
N ++P MGF Q+G DLSS C F P LELEGF
Sbjct: 143 NQIHAPISMGFGSLTQLGNRDLSSVPDFLSARSLLAPESNNNNTMLCGGFTAP-LELEGF 201
Query: 181 GAP-------------RALE----AAQQPTLFQKRRGSVEIS--RLETVRKKG--RKWED 219
G+P + LE + QPTLFQKR + S ++ G R +D
Sbjct: 202 GSPANGGFVGNRAKVLKPLEVLASSGAQPTLFQKRAAMRQSSGSKMGNSESSGMRRFSDD 261
Query: 220 GDV-EADFDDSGLNYESDENGNDLNSNATTVSGGDHKGKKKGLPAKNLMAERRRRKKLND 278
GD+ E + SGLNYESDE + + GG KGKKKG+PAKNLMAERRRRKKLND
Sbjct: 262 GDMDETGIEVSGLNYESDEINESGKAAESVQIGGGGKGKKKGMPAKNLMAERRRRKKLND 321
Query: 279 RLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPGSALPPSSSFHPL 338
RLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPGS P SSSFHPL
Sbjct: 322 RLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPGSLPPTSSSFHPL 381
Query: 339 TPTPQTLPCRVKEELYPGALPSPKNQPVKVEVRVREGRAVNIHMFCTRRPGLLLSTMKAL 398
TPTPQTL CRVKEEL P +LPSPK Q +VEVR+REGRAVNIHMFC RRPGLLL+TMKAL
Sbjct: 382 TPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMFCGRRPGLLLATMKAL 441
Query: 399 DNLGLDVQQAVISCFNGFALDVFRAEQCTEGQDVLPEQIKAVLLDSAGYPGMV 451
DNLGLDVQQAVISCFNGFALDVFRAEQC EGQ++LP+QIKAVL D+AGY GM+
Sbjct: 442 DNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILPDQIKAVLFDTAGYAGMI 494
>AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 387 bits (995), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/353 (63%), Positives = 248/353 (70%), Gaps = 45/353 (12%)
Query: 143 NASNSPALMGFSQGNQMGTLDLSS----------------------CSEFPPPGLELEGF 180
N ++P MGF Q+G DLSS C F P LELEGF
Sbjct: 143 NQIHAPISMGFGSLTQLGNRDLSSVPDFLSARSLLAPESNNNNTMLCGGFTAP-LELEGF 201
Query: 181 GAP-------------RALE----AAQQPTLFQKRRGSVEIS--RLETVRKKG--RKWED 219
G+P + LE + QPTLFQKR + S ++ G R +D
Sbjct: 202 GSPANGGFVGNRAKVLKPLEVLASSGAQPTLFQKRAAMRQSSGSKMGNSESSGMRRFSDD 261
Query: 220 GDV-EADFDDSGLNYESDENGNDLNSNATTVSGGDHKGKKKGLPAKNLMAERRRRKKLND 278
GD+ E + SGLNYESDE + + GG KGKKKG+PAKNLMAERRRRKKLND
Sbjct: 262 GDMDETGIEVSGLNYESDEINESGKAAESVQIGGGGKGKKKGMPAKNLMAERRRRKKLND 321
Query: 279 RLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPGSALPPSSSFHPL 338
RLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPGS P SSSFHPL
Sbjct: 322 RLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPGSLPPTSSSFHPL 381
Query: 339 TPTPQTLPCRVKEELYPGALPSPKNQPVKVEVRVREGRAVNIHMFCTRRPGLLLSTMKAL 398
TPTPQTL CRVKEEL P +LPSPK Q +VEVR+REGRAVNIHMFC RRPGLLL+TMKAL
Sbjct: 382 TPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMFCGRRPGLLLATMKAL 441
Query: 399 DNLGLDVQQAVISCFNGFALDVFRAEQCTEGQDVLPEQIKAVLLDSAGYPGMV 451
DNLGLDVQQAVISCFNGFALDVFRAEQC EGQ++LP+QIKAVL D+AGY GM+
Sbjct: 442 DNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILPDQIKAVLFDTAGYAGMI 494
>AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 387 bits (995), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/353 (63%), Positives = 248/353 (70%), Gaps = 45/353 (12%)
Query: 143 NASNSPALMGFSQGNQMGTLDLSS----------------------CSEFPPPGLELEGF 180
N ++P MGF Q+G DLSS C F P LELEGF
Sbjct: 143 NQIHAPISMGFGSLTQLGNRDLSSVPDFLSARSLLAPESNNNNTMLCGGFTAP-LELEGF 201
Query: 181 GAP-------------RALE----AAQQPTLFQKRRGSVEIS--RLETVRKKG--RKWED 219
G+P + LE + QPTLFQKR + S ++ G R +D
Sbjct: 202 GSPANGGFVGNRAKVLKPLEVLASSGAQPTLFQKRAAMRQSSGSKMGNSESSGMRRFSDD 261
Query: 220 GDV-EADFDDSGLNYESDENGNDLNSNATTVSGGDHKGKKKGLPAKNLMAERRRRKKLND 278
GD+ E + SGLNYESDE + + GG KGKKKG+PAKNLMAERRRRKKLND
Sbjct: 262 GDMDETGIEVSGLNYESDEINESGKAAESVQIGGGGKGKKKGMPAKNLMAERRRRKKLND 321
Query: 279 RLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPGSALPPSSSFHPL 338
RLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPGS P SSSFHPL
Sbjct: 322 RLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPGSLPPTSSSFHPL 381
Query: 339 TPTPQTLPCRVKEELYPGALPSPKNQPVKVEVRVREGRAVNIHMFCTRRPGLLLSTMKAL 398
TPTPQTL CRVKEEL P +LPSPK Q +VEVR+REGRAVNIHMFC RRPGLLL+TMKAL
Sbjct: 382 TPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMFCGRRPGLLLATMKAL 441
Query: 399 DNLGLDVQQAVISCFNGFALDVFRAEQCTEGQDVLPEQIKAVLLDSAGYPGMV 451
DNLGLDVQQAVISCFNGFALDVFRAEQC EGQ++LP+QIKAVL D+AGY GM+
Sbjct: 442 DNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILPDQIKAVLFDTAGYAGMI 494
>AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:4384758-4386392
FORWARD LENGTH=450
Length = 450
Score = 339 bits (869), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 187/274 (68%), Positives = 204/274 (74%), Gaps = 26/274 (9%)
Query: 188 AAQQPTLFQKRRG-----SVEISRLET---VRKKGRKWEDGDVEADFDD-SGLNYESDEN 238
+ QPTLFQKR S ++ E+ +RK + E D D SGLNYESD++
Sbjct: 193 SGSQPTLFQKRAAMRQSSSSKMCNSESSSEMRKSSYEREIDDTSTGIIDISGLNYESDDH 252
Query: 239 GNDLNSNATTVSGGDHKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASI 298
+ N +PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASI
Sbjct: 253 NTNNNKGKKKG-----------MPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASI 301
Query: 299 LGDAIDYLKELLQRINDLHNELESTPPGSALPPSSSFHPLTPTPQTLPCRVKEELYPGA- 357
LGDAIDYLKELLQRINDLH ELESTPP S SS HPLTPTPQTL RVKEEL P +
Sbjct: 302 LGDAIDYLKELLQRINDLHTELESTPPSS-----SSLHPLTPTPQTLSYRVKEELCPSSS 356
Query: 358 LPSPKNQPVKVEVRVREGRAVNIHMFCTRRPGLLLSTMKALDNLGLDVQQAVISCFNGFA 417
LPSPK Q +VEVR+REG+AVNIHMFC RRPGLLLSTM+ALDNLGLDVQQAVISCFNGFA
Sbjct: 357 LPSPKGQQPRVEVRLREGKAVNIHMFCGRRPGLLLSTMRALDNLGLDVQQAVISCFNGFA 416
Query: 418 LDVFRAEQCTEGQDVLPEQIKAVLLDSAGYPGMV 451
LDVFRAEQC E DVLPEQIKAVLLD+AGY G+V
Sbjct: 417 LDVFRAEQCQEDHDVLPEQIKAVLLDTAGYAGLV 450
>AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 |
chr5:26237137-26238904 FORWARD LENGTH=351
Length = 351
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 120/207 (57%), Gaps = 27/207 (13%)
Query: 251 GGDHKGKK----KGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYL 306
GG+ KK +G P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR SILGDAIDY+
Sbjct: 161 GGETNKKKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYM 220
Query: 307 KELLQRINDLHNELESTPPGSALPPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPV 366
KELL +IN L +E + + S F L P +N P
Sbjct: 221 KELLDKINKLQDEEQELGNSNNSHHSKLFGDLKDLNANEPL-------------VRNSP- 266
Query: 367 KVEVRVREGRAVNIHMFCTRRPGLLLSTMKALDNLGLDVQQAVISCFNGFALDVFRAEQC 426
K E+ R+ + + C+ +PGLLLST+ L+ LGL+++Q VISCF+ F+L C
Sbjct: 267 KFEIDRRD-EDTRVDICCSPKPGLLLSTVNTLETLGLEIEQCVISCFSDFSLQA----SC 321
Query: 427 TEGQD----VLPEQIKAVLLDSAGYPG 449
+EG + + E IK L +AGY G
Sbjct: 322 SEGAEQRDFITSEDIKQALFRNAGYGG 348
>AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:3341357-3342877 FORWARD
LENGTH=315
Length = 315
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 112/195 (57%), Gaps = 28/195 (14%)
Query: 257 KKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDL 316
K +G P+KNLMAERRRRK+LNDRL +LRS+VPKI+KMDR SILGDAIDY+KELL +IN L
Sbjct: 144 KLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKL 203
Query: 317 HNELESTPPGSALPPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPVKVEVRVREGR 376
+ + S L T T V+ L K EV RE
Sbjct: 204 QEDEQELGSNSHL----------STLITNESMVRNSL-------------KFEVDQRE-- 238
Query: 377 AVNIH--MFCTRRPGLLLSTMKALDNLGLDVQQAVISCFNGFALDVFRAEQCTEGQDVLP 434
VN H + C +PGL++ST+ L+ LGL+++Q VISCF+ F+L E + V
Sbjct: 239 -VNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEVGEQRYMVTS 297
Query: 435 EQIKAVLLDSAGYPG 449
E K L+ +AGY G
Sbjct: 298 EATKQALIRNAGYGG 312
>AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:7331721-7334077
FORWARD LENGTH=571
Length = 571
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 119/231 (51%), Gaps = 26/231 (11%)
Query: 238 NGNDLNSNATTVSGGDHKGK-------------KKGLPAKNLMAERRRRKKLNDRLYMLR 284
N D+N N SG D + KG AKNLMAERRRRKKLNDRLY LR
Sbjct: 275 NDKDMNENGRVDSGSDCSDQIDDEDDPKYKKKSGKGSQAKNLMAERRRRKKLNDRLYALR 334
Query: 285 SVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE---STPPGSALPPS--------- 332
S+VP+I+K+DRASILGDAI+Y+KEL +L +ELE T GS P
Sbjct: 335 SLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENSETEDGSNRPQGGMSLNGTVV 394
Query: 333 SSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPVKVEVRVREGRAVNIHMFCTRRPGLLL 392
+ FHP +P ++ + + +V+V +GR + + C +PG
Sbjct: 395 TGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVDVAQLDGREFFVKVICEYKPGGFT 454
Query: 393 STMKALDNLGLDVQQAVISCFNGFALDVFRAEQCTEGQDVLPEQIKAVLLD 443
M+ALD+LGL+V A + + +VF+ E+ + + V E ++ LL+
Sbjct: 455 RLMEALDSLGLEVTNANTTRYLSLVSNVFKVEK-NDNEMVQAEHVRNSLLE 504
>AT5G65640.2 | Symbols: bHLH093 | beta HLH protein 93 |
chr5:26237137-26238635 FORWARD LENGTH=290
Length = 290
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 60/73 (82%), Gaps = 4/73 (5%)
Query: 251 GGDHKGKK----KGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYL 306
GG+ KK +G P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR SILGDAIDY+
Sbjct: 161 GGETNKKKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYM 220
Query: 307 KELLQRINDLHNE 319
KELL +IN L +E
Sbjct: 221 KELLDKINKLQDE 233
>AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29,
ATFIT1 | FER-like regulator of iron uptake |
chr2:12004713-12005908 FORWARD LENGTH=318
Length = 318
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 234 ESDENGNDLNSNATTVSGGDHKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKM 293
E +E+ ND + ++ T + D K K ++ L++ERRRR ++ D+LY LRS+VP I+KM
Sbjct: 101 EDEEDYNDGDDSSATTTNNDGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKM 160
Query: 294 DRASILGDAIDYLKELLQRINDLHNELESTPPGSALPPSSSFHPLTPTPQTLPCRVKEEL 353
D+ASI+GDA+ Y++EL + L +++ ++L + + P Q K +
Sbjct: 161 DKASIVGDAVLYVQELQSQAKKLKSDIAGLE--ASLNSTGGYQEHAPDAQ------KTQP 212
Query: 354 YPGALPSPKNQPVKVEVRVREGRAVNIHMFCTRRPGLLLSTMKALDNL-GLDVQQAVIS 411
+ G P + ++++V E + + + C + G+ S K+L++L VQ + +S
Sbjct: 213 FRGINPPASKKIIQMDVIQVEEKGFYVRLVCNKGEGVAPSLYKSLESLTSFQVQNSNLS 271
>AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154872 FORWARD
LENGTH=247
Length = 247
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 97/180 (53%), Gaps = 7/180 (3%)
Query: 263 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLH---NE 319
+KN+++ER RR+KLN RL+ LRSVVP I+KMD+ASI+ DAI Y++ L L E
Sbjct: 53 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 112
Query: 320 LESTPPGSALPPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPVKVEVRVREGRAVN 379
LESTP S+L S F P T + ++L G+ S + ++++V R +
Sbjct: 113 LESTPK-SSLSFSKDFDRDLLVPVT--SKKMKQLDSGSSTSLI-EVLELKVTFMGERTMV 168
Query: 380 IHMFCTRRPGLLLSTMKALDNLGLDVQQAVISCFNGFALDVFRAEQCTEGQDVLPEQIKA 439
+ + C +R ++ + ++L L + + ++ F+G E E Q+VL +I+
Sbjct: 169 VSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEADEEEQEVLRLKIET 228
>AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154556 FORWARD
LENGTH=219
Length = 219
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 88/156 (56%), Gaps = 7/156 (4%)
Query: 263 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLH---NE 319
+KN+++ER RR+KLN RL+ LRSVVP I+KMD+ASI+ DAI Y++ L L E
Sbjct: 54 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 113
Query: 320 LESTPPGSALPPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPVKVEVRVREGRAVN 379
LESTP S+L S F P T + ++L G+ S + ++++V R +
Sbjct: 114 LESTPK-SSLSFSKDFDRDLLVPVT--SKKMKQLDSGSSTSLI-EVLELKVTFMGERTMV 169
Query: 380 IHMFCTRRPGLLLSTMKALDNLGLDVQQAVISCFNG 415
+ + C +R ++ + ++L L + + ++ F+G
Sbjct: 170 VSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSG 205
>AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23153293 FORWARD
LENGTH=226
Length = 226
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 88/156 (56%), Gaps = 7/156 (4%)
Query: 263 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLH---NE 319
+KN+++ER RR+KLN RL+ LRSVVP I+KMD+ASI+ DAI Y++ L L E
Sbjct: 54 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 113
Query: 320 LESTPPGSALPPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPVKVEVRVREGRAVN 379
LESTP S+L S F P T + ++L G+ S + ++++V R +
Sbjct: 114 LESTPK-SSLSFSKDFDRDLLVPVT--SKKMKQLDSGSSTSLI-EVLELKVTFMGERTMV 169
Query: 380 IHMFCTRRPGLLLSTMKALDNLGLDVQQAVISCFNG 415
+ + C +R ++ + ++L L + + ++ F+G
Sbjct: 170 VSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSG 205
>AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=225
Length = 225
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 82/153 (53%), Gaps = 18/153 (11%)
Query: 263 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELES 322
+KN+++ER RR+KLN RL+ LRSVVP ISK+D+AS++ D+IDY++EL+ + L E+
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 323 TPPGSALPPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPVKVEVRVREGRAVNIHM 382
S L + P RV+ YP + ++++V + V + +
Sbjct: 113 LESRSTLLEN---------PMDYSTRVQH--YPI-------EVLEMKVTWMGEKTVVVCI 154
Query: 383 FCTRRPGLLLSTMKALDNLGLDVQQAVISCFNG 415
C+++ ++ K L++L L++ S F
Sbjct: 155 TCSKKRETMVQLCKVLESLNLNILTTNFSSFTS 187
>AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154801 FORWARD
LENGTH=264
Length = 264
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 88/156 (56%), Gaps = 7/156 (4%)
Query: 263 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLH---NE 319
+KN+++ER RR+KLN RL+ LRSVVP I+KMD+ASI+ DAI Y++ L L E
Sbjct: 54 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 113
Query: 320 LESTPPGSALPPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPVKVEVRVREGRAVN 379
LESTP S+L S F P T + ++L G+ S + ++++V R +
Sbjct: 114 LESTPK-SSLSFSKDFDRDLLVPVT--SKKMKQLDSGSSTSLI-EVLELKVTFMGERTMV 169
Query: 380 IHMFCTRRPGLLLSTMKALDNLGLDVQQAVISCFNG 415
+ + C +R ++ + ++L L + + ++ F+G
Sbjct: 170 VSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSG 205
>AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr5:18974231-18976009 FORWARD
LENGTH=592
Length = 592
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 18/190 (9%)
Query: 262 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKEL---LQRINDLHN 318
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL LQ+
Sbjct: 413 PLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKE 472
Query: 319 ELESTPPGSALPPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPVKVEVRVREGRAV 378
E++ G + ++ + R KE + + ++++V++ G V
Sbjct: 473 EIQKKLDGMSKEGNNG--------KGCGSRAKERKSSNQDSTASSIEMEIDVKII-GWDV 523
Query: 379 NIHMFCTRR--PGLLLSTMKALDNLGLDVQQAVISCFNGFALDVFRAEQCTEGQDVLPEQ 436
I + C ++ PG M+AL L L+V A +S N + +A Q +Q
Sbjct: 524 MIRVQCGKKDHPGARF--MEALKELDLEVNHASLSVVNDLMIQ--QATVKMGSQFFNHDQ 579
Query: 437 IKAVLLDSAG 446
+K L+ G
Sbjct: 580 LKVALMTKVG 589
>AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:6182067-6186261
FORWARD LENGTH=518
Length = 518
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 33/151 (21%)
Query: 257 KKKGLPAKNL---MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRI 313
K K LP ++L +AERRRR+KLN++ LRS+VP ++KMD+ SILGD I Y+ L +R+
Sbjct: 353 KDKRLPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRV 412
Query: 314 NDLHNELESTPPGSALPPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPVKVEVRVR 373
++L N H +T C+ + +VEV +
Sbjct: 413 HELENT----------------HHEQQHKRTRTCK-------------RKTSEEVEVSII 443
Query: 374 EGRAVNIHMFCTRRPGLLLSTMKALDNLGLD 404
E V + M C R GLLL ++ L LG++
Sbjct: 444 EN-DVLLEMRCEYRDGLLLDILQVLHELGIE 473
>AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type
transcription factor | chr2:19091187-19092887 REVERSE
LENGTH=566
Length = 566
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 46/58 (79%)
Query: 262 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNE 319
P ++ AER+RR+KLN R Y LRSVVP ISKMD+AS+LGDAI Y+KEL +++ + +E
Sbjct: 393 PLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDE 450
>AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr4:9933702-9935471 REVERSE LENGTH=589
Length = 589
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 262 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 321
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++ ++ E
Sbjct: 414 PLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKE 473
Query: 322 STPPGSALPPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPVKVEVRVR-EGRAVNI 380
+ VK+ L + +++EV V+ G I
Sbjct: 474 ELQK--------QIDVMNKEAGNAKSSVKDR---KCLNQESSVLIEMEVDVKIIGWDAMI 522
Query: 381 HMFCTRR--PGLLLSTMKALDNLGLDVQQAVISCFNGFALDVFRAEQCTEGQDVLPEQIK 438
+ C++R PG M+AL L L+V A +S N + +A Q +Q+K
Sbjct: 523 RIQCSKRNHPGAKF--MEALKELDLEVNHASLSVVNDLMIQ--QATVKMGNQFFTQDQLK 578
Query: 439 AVLLDSAG 446
L + G
Sbjct: 579 VALTEKVG 586
>AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=254
Length = 254
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 263 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELES 322
+KN+++ER RR+KLN RL+ LRSVVP ISK+D+AS++ D+IDY++EL+ + L E+
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 323 TPPGSALPPS-----------SSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPVKVEVR 371
S L + + + + K+ Y + + ++++V
Sbjct: 113 LESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVT 172
Query: 372 VREGRAVNIHMFCTRRPGLLLSTMKALDNLGLDVQQAVISCFNG 415
+ V + + C+++ ++ K L++L L++ S F
Sbjct: 173 WMGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTS 216
>AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645505 FORWARD
LENGTH=263
Length = 263
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 263 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELES 322
+KN+++ER RR+KLN RL+ LRSVVP ISK+D+AS++ D+IDY++EL+ + L E+
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 323 TPPGSALPPS-----------SSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPVKVEVR 371
S L + + + + K+ Y + + ++++V
Sbjct: 113 LESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVT 172
Query: 372 VREGRAVNIHMFCTRRPGLLLSTMKALDNLGLDVQQAVISCFNG 415
+ V + + C+++ ++ K L++L L++ S F
Sbjct: 173 WMGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTS 216
>AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645168 FORWARD
LENGTH=184
Length = 184
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 49/67 (73%)
Query: 263 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELES 322
+KN+++ER RR+KLN RL+ LRSVVP ISK+D+AS++ D+IDY++EL+ + L E+
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 323 TPPGSAL 329
S L
Sbjct: 113 LESRSTL 119
>AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |
Basic helix-loop-helix (bHLH) DNA-binding family protein
| chr1:11799042-11800913 REVERSE LENGTH=623
Length = 623
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 262 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 321
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++ +E
Sbjct: 450 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKL 509
Query: 322 STPPGSALPPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKN--QPVKVEVRVR-EGRAV 378
+ L L R K G + S + +PV +E+ V+ G
Sbjct: 510 QIK-----------NQLEEVKLELAGR-KASASGGDMSSSCSSIKPVGMEIEVKIIGWDA 557
Query: 379 NIHMFCTRRPGLLLSTMKALDNLGLDVQQAVISCFNGFALDVFRAEQCTEGQDVLPEQIK 438
I + ++R M AL +L L+V A +S N + +A + EQ++
Sbjct: 558 MIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQ--QATVKMGFRIYTQEQLR 615
Query: 439 AVLLDSAG 446
A L+ G
Sbjct: 616 ASLISKIG 623
>AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:23599809-23602734
FORWARD LENGTH=596
Length = 596
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 267 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPG 326
++E++RR+KLN+R LRS++P ISK+D+ SIL D I+YL++L +R+ +L + ES
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESADTE 467
Query: 327 SALPPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPVKV-------EVRVRE-GRAV 378
+ + P + + + + +++P + +R+ G V
Sbjct: 468 TRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAGLTDNLRISSLGNEV 527
Query: 379 NIHMFCTRRPGLLLSTMKALDNLGLDVQQAVISCFNGF 416
I + C R G+LL M + +L LD S +G
Sbjct: 528 VIELRCAWREGILLEIMDVISDLNLDSHSVQSSTGDGL 565
>AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 267 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPG 326
++E++RR+KLN+R LRS++P ISK+D+ SIL D I+YL++L +R+ +L + ES
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESADTE 467
Query: 327 SALPPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPVKV-------EVRVRE-GRAV 378
+ + P + + + + +++P + +R+ G V
Sbjct: 468 TRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAGLTDNLRISSLGNEV 527
Query: 379 NIHMFCTRRPGLLLSTMKALDNLGLDVQQAVISCFNGF 416
I + C R G+LL M + +L LD S +G
Sbjct: 528 VIELRCAWREGILLEIMDVISDLNLDSHSVQSSTGDGL 565
>AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 267 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPG 326
++E++RR+KLN+R LRS++P ISK+D+ SIL D I+YL++L +R+ +L + ES
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESADTE 467
Query: 327 SALPPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPVKV-------EVRVRE-GRAV 378
+ + P + + + + +++P + +R+ G V
Sbjct: 468 TRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAGLTDNLRISSLGNEV 527
Query: 379 NIHMFCTRRPGLLLSTMKALDNLGLDVQQAVISCFNGF 416
I + C R G+LL M + +L LD S +G
Sbjct: 528 VIELRCAWREGILLEIMDVISDLNLDSHSVQSSTGDGL 565
>AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:362230-363639 REVERSE
LENGTH=423
Length = 423
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 257 KKKGLPA--KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN 314
K+K PA ++ AE++RR+KLN R Y LR++VPK+S+MD+AS+L DA+ Y++ L +I+
Sbjct: 240 KEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKID 299
Query: 315 DLHNELE 321
DL E++
Sbjct: 300 DLETEIK 306
>AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 223 EADFDDSGLNYESDENGNDLNSNATTVSGGDHKGKKKGLPAKNLMAERRRRKKLNDRLYM 282
E + D G +D G D + N G + ++ AER+RR+KLN R Y
Sbjct: 392 ENNSDGEGGGEWADAVGADESGNNRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYA 451
Query: 283 LRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE-----STPPGS 327
LRSVVP ISKMD+AS+LGDA+ Y+ EL ++ + E E S PP S
Sbjct: 452 LRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERERLGYSSNPPIS 501
>AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 223 EADFDDSGLNYESDENGNDLNSNATTVSGGDHKGKKKGLPAKNLMAERRRRKKLNDRLYM 282
E + D G +D G D + N G + ++ AER+RR+KLN R Y
Sbjct: 392 ENNSDGEGGGEWADAVGADESGNNRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYA 451
Query: 283 LRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE-----STPPGS 327
LRSVVP ISKMD+AS+LGDA+ Y+ EL ++ + E E S PP S
Sbjct: 452 LRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERERLGYSSNPPIS 501
>AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 223 EADFDDSGLNYESDENGNDLNSNATTVSGGDHKGKKKGLPAKNLMAERRRRKKLNDRLYM 282
E + D G +D G D + N G + ++ AER+RR+KLN R Y
Sbjct: 392 ENNSDGEGGGEWADAVGADESGNNRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYA 451
Query: 283 LRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE-----STPPGS 327
LRSVVP ISKMD+AS+LGDA+ Y+ EL ++ + E E S PP S
Sbjct: 452 LRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERERLGYSSNPPIS 501
>AT1G10610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:3506463-3508752 FORWARD
LENGTH=441
Length = 441
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 245 NATTVSGGDHKGKKKGLP-----AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASIL 299
+ + D K KK LP +KNL +ER+RR+++N +Y LR+VVPKI+K+++ I
Sbjct: 240 DVVVQNANDSKANKKLLPTENFKSKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIF 299
Query: 300 GDAIDYLKELLQRINDLHNELE 321
DA+DY+ ELL L +EL+
Sbjct: 300 SDAVDYINELLVEKQKLEDELK 321
>AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:9267599-9269002 FORWARD
LENGTH=467
Length = 467
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 59/111 (53%), Gaps = 18/111 (16%)
Query: 227 DDSGLNYESDE----------NGNDLNSNATTVSGGDHKGKKKGLPAKN--------LMA 268
DD+G + ES E G + + T + K +K+G N + A
Sbjct: 265 DDTGFSLESYEVQAIGGSNQVYGYEQGKDETLYLTDEQKPRKRGRKPANGREEALNHVEA 324
Query: 269 ERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNE 319
ER+RR+KLN R Y LR+VVP ISKMD+AS+L DAI Y+ ++ ++I E
Sbjct: 325 ERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETE 375
>AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:16529457-16532866
FORWARD LENGTH=637
Length = 637
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 72/169 (42%), Gaps = 29/169 (17%)
Query: 269 ERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPGSA 328
E++RR+KLN+R LR ++P I+K+D+ SIL D I+YL+EL +R+ +L + EST
Sbjct: 446 EKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCREST----- 500
Query: 329 LPPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPVKVEV------------------ 370
+ + PC E + KV V
Sbjct: 501 ---DTETRGTMTMKRKKPCDAGERTSANCANNETGNGKKVSVNNVGEAEPADTGFTGLTD 557
Query: 371 --RVRE-GRAVNIHMFCTRRPGLLLSTMKALDNLGLDVQQAVISCFNGF 416
R+ G V I + C R G+LL M + +L LD S +G
Sbjct: 558 NLRIGSFGNEVVIELRCAWREGVLLEIMDVISDLHLDSHSVQSSTGDGL 606
>AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 |
chr5:19002719-19004254 FORWARD LENGTH=511
Length = 511
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 16/159 (10%)
Query: 262 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 321
P ++ AER RR+KLN R Y LR+VVP +SKMD+ S+L DA+ Y+ EL + ++ ELE
Sbjct: 341 PLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENV--ELE 398
Query: 322 STPPGSALPPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPVKVEVRVREG--RAVN 379
+ + +P K E ++ +K+EV++ E V
Sbjct: 399 KHAIEIQF---NELKEIAGQRNAIPSVCKYE-------EKASEMMKIEVKIMESDDAMVR 448
Query: 380 IHMFCTRRPGLLLSTMKALDNLGLDVQQAVISCFNGFAL 418
+ PG L M AL +L L+V A IS N +
Sbjct: 449 VESRKDHHPGARL--MNALMDLELEVNHASISVMNDLMI 485
>AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:17796362-17797647 REVERSE
LENGTH=328
Length = 328
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 17/174 (9%)
Query: 255 KGKKKGLP--------AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYL 306
KG K+ P +++AER+RR+KL R L ++VP + KMD+AS+LGDA+ ++
Sbjct: 135 KGTKRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHI 194
Query: 307 KELLQRINDLHNELESTPPGSALPPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPV 366
K L +R+ +L + + S + S L Q+ ++ LP
Sbjct: 195 KYLQERVGELEEQKKERRLESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLP------- 247
Query: 367 KVEVRVREGRAVNIHMFCTRRPGLLLSTMKALDNLGLDVQQAVISCFNGFALDV 420
++EVR + V I + C ++ G L M ++ L + + + + F G LD+
Sbjct: 248 EIEVRFSD-EDVLIKILCEKQKGHLAKIMAEIEKLHILITNSSVLNF-GPTLDI 299
>AT2G31220.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:13303014-13304661 FORWARD
LENGTH=458
Length = 458
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 21/195 (10%)
Query: 268 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPG- 326
ER RR NDR + L++++P +K+DRASI+G+AIDY+KELL+ I + +E G
Sbjct: 251 TERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELLRTIEEFKMLVEKKRCGR 310
Query: 327 ------------------SALPPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPVKV 368
+ ++ P + Q+ + + K++ +V
Sbjct: 311 FRSKKRARVGEGGGGEDQEEEEDTVNYKPQSEVDQSCFNKNNNNSLRCSWLKRKSKVTEV 370
Query: 369 EVRVREGRAVNIHMFCTRRPGLLLSTMKALDNLGLDVQQAVISCFNGFALDVFRAEQCTE 428
+VR+ + V I + ++ LL T K LD L LD+ +F + C E
Sbjct: 371 DVRIIDDE-VTIKLVQKKKINCLLFTTKVLDQLQLDLHHVAGGQIGEHYSFLFNTKIC-E 428
Query: 429 GQDVLPEQIKAVLLD 443
G V I L++
Sbjct: 429 GSCVYASGIADTLME 443
>AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9678012-9679165 FORWARD
LENGTH=295
Length = 295
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 86/170 (50%), Gaps = 13/170 (7%)
Query: 254 HKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRI 313
H + L ++++AER+RR+KL+++ L +++P + K D+ +IL DAI +K+L +++
Sbjct: 109 HGTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQL 168
Query: 314 NDLHNELESTPPGSAL---PPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPVKVEV 370
L E E+T ++ S F P P E + ALP ++E
Sbjct: 169 RTLKEEKEATRQMESMILVKKSKVFFDEEPNLSCSPSVHIE--FDQALP-------EIEA 219
Query: 371 RVREGRAVNIHMFCTRRPGLLLSTMKALDNLGLDVQQAVISCFNGFALDV 420
++ + + I + C + G +++ + ++N L ++ +++ F LD+
Sbjct: 220 KISQNDIL-IRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTLDI 268
>AT4G21330.1 | Symbols: DYT1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:11349922-11350694
FORWARD LENGTH=207
Length = 207
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 14/192 (7%)
Query: 254 HKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRI 313
K + + + NL AERRRR+KL+ RL LRS VP ++ M +ASI+ DAI Y+ EL
Sbjct: 22 EKEEDENFKSPNLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQ--- 78
Query: 314 NDLHNELESTPPGSALPPSSSFHPLTPT--PQTLPCRVKEELYPGALPSPKNQPVKVEVR 371
N++ N LE+ PP P P+ + EE+ + V++
Sbjct: 79 NNVKNLLETFHEMEEAPPEIDEEQTDPMIKPEVETSDLNEEMKKLGIEE------NVQLC 132
Query: 372 VREGRAVNIHMFCTRRPGLLLSTMKALDNLGLDVQQAVISCFNGFALDVFRAEQCTEGQD 431
R + + +R G+ M+ + LG ++ ++ NG A+ + + Q E D
Sbjct: 133 KIGERKFWLKIITEKRDGIFTKFMEVMRFLGFEIIDISLTTSNG-AILISASVQTQELCD 191
Query: 432 VLPEQIKAVLLD 443
V EQ K LL+
Sbjct: 192 V--EQTKDFLLE 201
>AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=304
Length = 304
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 11/144 (7%)
Query: 265 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 324
+++AER+RR+KL R L +++P + KMD+AS+LGDAI ++K L + + + + +
Sbjct: 127 HILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEKT 186
Query: 325 PGSALPPSSSFHPLTPTPQ---TLPCRVKEELYPGALPSPKNQPVKVEVRVREGRAVNIH 381
S + S L Q + LP ++EVRV G+ V I
Sbjct: 187 MESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLP-------EIEVRV-SGKDVLIK 238
Query: 382 MFCTRRPGLLLSTMKALDNLGLDV 405
+ C ++ G ++ M ++ LGL +
Sbjct: 239 ILCEKQKGNVIKIMGEIEKLGLSI 262
>AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=305
Length = 305
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 11/144 (7%)
Query: 265 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 324
+++AER+RR+KL R L +++P + KMD+AS+LGDAI ++K L + + + + +
Sbjct: 127 HILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEKT 186
Query: 325 PGSALPPSSSFHPLTPTPQ---TLPCRVKEELYPGALPSPKNQPVKVEVRVREGRAVNIH 381
S + S L Q + LP ++EVRV G+ V I
Sbjct: 187 MESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLP-------EIEVRV-SGKDVLIK 238
Query: 382 MFCTRRPGLLLSTMKALDNLGLDV 405
+ C ++ G ++ M ++ LGL +
Sbjct: 239 ILCEKQKGNVIKIMGEIEKLGLSI 262
>AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:9684858-9686321
FORWARD LENGTH=320
Length = 320
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 44/59 (74%)
Query: 261 LPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNE 319
L ++++AER+RR+KLN+RL L +++P + K D+A++L DAI +LK+L +R+ L E
Sbjct: 129 LLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEE 187
>AT1G06170.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:1885146-1886564 REVERSE
LENGTH=420
Length = 420
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 16/216 (7%)
Query: 228 DSGLNYESDENGNDLNSNATTVSGGDHKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVV 287
+ G+N DE N+L+ G K+K P ER RR DR L++++
Sbjct: 187 NQGVNLMYDEENNNLDDGLNRKGRG--SKKRKIFPT-----ERERRVHFKDRFGDLKNLI 239
Query: 288 PKISKMDRASILGDAIDYLKELLQRINDLHNELES------TPPGSALPPSSSFHPLTPT 341
P +K DRASI+G+AIDY+KELL+ I++ +E G + +F +
Sbjct: 240 PNPTKNDRASIVGEAIDYIKELLRTIDEFKLLVEKKRVKQRNREGDDV-VDENFKAQSEV 298
Query: 342 PQTLPCRVKEELYPGALPSPKNQPVKVEVRVREGRAVNIHMFCTRRPGLLLSTMKALDNL 401
+ K + K++ V+VR+ + V I + ++ LL K +D L
Sbjct: 299 VEQCLINKKNNALRCSWLKRKSKFTDVDVRIIDDE-VTIKIVQKKKINCLLFVSKVVDQL 357
Query: 402 GLDVQQAVISCFNGFALDVFRAEQCTEGQDVLPEQI 437
LD+ + +F A + +EG V I
Sbjct: 358 ELDLHHVAGAQIGEHHSFLFNA-KISEGSSVYASAI 392
>AT1G06170.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:1885146-1886564 REVERSE
LENGTH=420
Length = 420
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 16/216 (7%)
Query: 228 DSGLNYESDENGNDLNSNATTVSGGDHKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVV 287
+ G+N DE N+L+ G K+K P ER RR DR L++++
Sbjct: 187 NQGVNLMYDEENNNLDDGLNRKGRG--SKKRKIFPT-----ERERRVHFKDRFGDLKNLI 239
Query: 288 PKISKMDRASILGDAIDYLKELLQRINDLHNELES------TPPGSALPPSSSFHPLTPT 341
P +K DRASI+G+AIDY+KELL+ I++ +E G + +F +
Sbjct: 240 PNPTKNDRASIVGEAIDYIKELLRTIDEFKLLVEKKRVKQRNREGDDV-VDENFKAQSEV 298
Query: 342 PQTLPCRVKEELYPGALPSPKNQPVKVEVRVREGRAVNIHMFCTRRPGLLLSTMKALDNL 401
+ K + K++ V+VR+ + V I + ++ LL K +D L
Sbjct: 299 VEQCLINKKNNALRCSWLKRKSKFTDVDVRIIDDE-VTIKIVQKKKINCLLFVSKVVDQL 357
Query: 402 GLDVQQAVISCFNGFALDVFRAEQCTEGQDVLPEQI 437
LD+ + +F A + +EG V I
Sbjct: 358 ELDLHHVAGAQIGEHHSFLFNA-KISEGSSVYASAI 392
>AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:19239694-19242373 FORWARD
LENGTH=371
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 17/146 (11%)
Query: 265 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDLHNELES 322
++ ER RR+++N L LRS++P I + D+ASI+G AID++K L Q++ L + S
Sbjct: 195 HIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQKRS 254
Query: 323 TPP---GSALPPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPVKVEVRVREGRAVN 379
+P +S ++ L KEE ++ +K+E V E VN
Sbjct: 255 QQSDDNKEQIPEDNSLRNISSNK--LRASNKEE---------QSSKLKIEATVIESH-VN 302
Query: 380 IHMFCTRRPGLLLSTMKALDNLGLDV 405
+ + CTR+ G LL ++ L+ L V
Sbjct: 303 LKIQCTRKQGQLLRSIILLEKLRFTV 328
>AT2G31210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:13296655-13298139 FORWARD
LENGTH=428
Length = 428
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 255 KGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN 314
+GK+K P ER RR LN+R L+ ++P SK DRASIL D IDY+ EL +R++
Sbjct: 208 RGKRKNKP---FTTERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVS 264
Query: 315 DL 316
+L
Sbjct: 265 EL 266
>AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr3:8715525-8717772
REVERSE LENGTH=414
Length = 414
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 23/173 (13%)
Query: 265 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDLHNELES 322
++ ER RRK++N+ L +LRS++P + + D+ASI+G AI++++EL Q + L ++
Sbjct: 199 HIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRR 258
Query: 323 TPPGSA----------LPPSSSFHPLTPTPQTLPCRVKEELYPGAL--PSPKNQPVKVEV 370
G + P + V E G L + +N+ +V
Sbjct: 259 RILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTELEGGGGLREETAENKSCLADV 318
Query: 371 RVR-EGRAVNIHMFCTRRPGLLLSTMKALDNLGLDV--------QQAVISCFN 414
V+ G I + RRPG L+ T+ AL++L L + +Q V+ FN
Sbjct: 319 EVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTVLYSFN 371
>AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 267 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPG 326
++ERRRR ++N+++ L+ ++P +K+D+AS+L +AI+YLK L L ++ S G
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSL-----QLQVQIMSMASG 404
Query: 327 SALPPSSSFHP 337
LPP+ F P
Sbjct: 405 YYLPPAVMFPP 415
>AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 267 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPG 326
++ERRRR ++N+++ L+ ++P +K+D+AS+L +AI+YLK L L ++ S G
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSL-----QLQVQIMSMASG 404
Query: 327 SALPPSSSFHP 337
LPP+ F P
Sbjct: 405 YYLPPAVMFPP 415
>AT1G72210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:27180066-27182268 FORWARD
LENGTH=320
Length = 320
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 19/150 (12%)
Query: 265 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDLHNELES 322
++ ER RRK++N+ L +LRS++P + D+ASI+G AI+YLKEL + +
Sbjct: 127 HIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSME----- 181
Query: 323 TPPGSALPPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPV---------KVEVRVR 373
P +A + + H T T + + A P N+P ++EV +
Sbjct: 182 PPVKTATEDTGAGHDQTKTTSASSSGPFSDFF--AFPQYSNRPTSAAAAEGMAEIEVTMV 239
Query: 374 EGRAVNIHMFCTRRPGLLLSTMKALDNLGL 403
E A ++ + +RP LL + ++ +L L
Sbjct: 240 ESHA-SLKILAKKRPRQLLKLVSSIQSLRL 268
>AT1G22490.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:7938448-7940489 REVERSE
LENGTH=304
Length = 304
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 265 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDLHNELES 322
++ ER RRK++N+ L +LRS++P + D+ASI+G AI+Y+KEL + + +
Sbjct: 117 HIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPKRTR 176
Query: 323 T--PPGSALPPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPVKVEVRVREGRAVNI 380
T P G SS P T K +P + P ++EV V E A NI
Sbjct: 177 THDPKGDKTSTSSLVGPFTDFFSFPQYSTKSS---SDVPESSSSPAEIEVTVAESHA-NI 232
Query: 381 HMFCTRRPGLLLSTMKALDNLGLDVQQAVISCFNGFAL 418
+ ++P LL + +L +L L + ++ + L
Sbjct: 233 KIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSIL 270
>AT4G28815.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14228719-14230288 FORWARD
LENGTH=307
Length = 307
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 251 GGDHKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELL 310
G + + + NL AERRRR+K+N+R+ L+ ++P+ +K + S+L D I+Y+K L
Sbjct: 142 GSTSRKRSRAAEMHNL-AERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLE 200
Query: 311 QRINDL--HNELESTPPGSALPPSSSFH 336
+IN H + P + +P S H
Sbjct: 201 MQINQFMPHMAMGMNQPPAYIPFPSQAH 228
>AT2G31215.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:13299807-13300302 FORWARD
LENGTH=129
Length = 129
Score = 52.4 bits (124), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 255 KGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN 314
KG KK ++ + ER RR NDR + L++++P +K ASI+ D I Y+ EL + ++
Sbjct: 17 KGSKK---SRTFLTERERRALFNDRFFDLKNLIPNPTKGGEASIVQDGIVYINELQRLVS 73
Query: 315 DL------------HNELESTPPGSALPPSSSFHPLTPTPQTLPCRVK 350
+L HN +E + S HP + T C ++
Sbjct: 74 ELKYLVEKKKCGARHNNIEVDNKNTIYGTSKIEHPFSKNKNTFNCLIR 121
>AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14218329-14219887 FORWARD
LENGTH=340
Length = 340
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 37/51 (72%)
Query: 267 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLH 317
++ERRRR+K+N+ + L+ ++P+ +K DR+S+L D I+Y+K L +I H
Sbjct: 284 LSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQGKH 334
>AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14221970-14224075 FORWARD
LENGTH=445
Length = 445
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 267 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDL 316
+AERRRR+K+N+++ L+ ++P+ +K + S L DAI+Y+K L +I +
Sbjct: 262 LAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQGM 311
>AT4G38070.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:17876535-17882569 FORWARD
LENGTH=1513
Length = 1513
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 242 LNSNATTVSGGDHKGKKKGLPAKNLM-AERRRRKKLNDRLYMLRSVVPKISKMDRASILG 300
L S +V+ K + K + AK AERRRR ++N + LR+++P + K D+AS+LG
Sbjct: 1329 LFSRGFSVTKPKSKTESKEVAAKKHSDAERRRRLRINSQFATLRTILPNLVKQDKASVLG 1388
Query: 301 DAIDYLKELLQRINDL 316
+ + Y EL + + D+
Sbjct: 1389 ETVRYFNELKKMVQDI 1404
>AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:26785332-26786338
REVERSE LENGTH=210
Length = 210
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 229 SGLNYESDENGNDLNSNATTVSGGDHKGK-KKGLPAK-NLMAERRRRKKLNDRLYMLRSV 286
S + Y E G D + SG + K+ + A+ + ++E++RR K+N+++ L+ +
Sbjct: 60 SSVGYGVSETGQDKYAFEHKRSGAKQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKL 119
Query: 287 VPKISKMDRASILGDAIDYLKELLQRINDL 316
+P +K D+AS+L +AI+YLK+L ++ L
Sbjct: 120 IPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17863-19848
FORWARD LENGTH=399
Length = 399
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 39/58 (67%)
Query: 257 KKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN 314
K+ A + +ER+RR K+N R+ L+ +VP SK D+AS+L + I+YLK+L +++
Sbjct: 210 KRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVS 267
>AT2G40435.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: transcription regulators (TAIR:AT3G56220.1); Has 289
Blast hits to 289 proteins in 30 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr2:16887048-16888407 FORWARD LENGTH=158
Length = 158
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 86/187 (45%), Gaps = 35/187 (18%)
Query: 266 LMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPP 325
+++ ++R L ++ +LRS+ ++ D SI+ DA Y+++L Q++ + +
Sbjct: 1 MVSREQKRGSLQEKFQLLRSITNSHAEND-TSIIMDASKYIQKLKQKVERFNQD------ 53
Query: 326 GSALPPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPVKVEVRVREGRAVNIHMFCT 385
P++ PT P E L G + I++F
Sbjct: 54 -----PTAEQSSSEPTDPKTPMVTVETLDKGFM---------------------INVFSG 87
Query: 386 R-RPGLLLSTMKALDNLGLDVQQAVISCFNGFALDVFRAEQCTEGQDVLPEQIKAVLLDS 444
+ +PG+L+S ++A +++GL+V +A SC + F+L E +G+++ E +K + D+
Sbjct: 88 KNQPGMLVSVLEAFEDIGLNVLEARASCTDSFSLHAMGLEN-EDGENMDAEAVKQAVTDA 146
Query: 445 AGYPGMV 451
G +
Sbjct: 147 IRSWGEI 153
>AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17414167-17415945
FORWARD LENGTH=373
Length = 373
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 267 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN--DLHNELESTP 324
++E+RRR ++N+++ L+S++P +K D+AS+L +AI+YLK+L ++ + N + P
Sbjct: 204 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGINLHP 263
Query: 325 ---PGSALPP 331
PG+ L P
Sbjct: 264 LCLPGTTLHP 273
>AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14218329-14220173 FORWARD
LENGTH=413
Length = 413
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 36/48 (75%)
Query: 267 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN 314
++ERRRR+K+N+ + L+ ++P+ +K DR+S+L D I+Y+K L +I
Sbjct: 284 LSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQ 331
>AT3G56220.1 | Symbols: | transcription regulators |
chr3:20858941-20860302 FORWARD LENGTH=156
Length = 156
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 83/176 (47%), Gaps = 33/176 (18%)
Query: 269 ERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPGSA 328
E +R L ++ ++LRS+ ++ + SI+ DA Y+K+L Q++ ++N +T +
Sbjct: 5 EHKRGSSLREKFHLLRSITDSHAESE-TSIIVDASKYIKKLKQKVEKINN---ATTSEQS 60
Query: 329 LPPSSSFHPLTPTPQTLPCRVKEELYPGALPSPKNQPVKVEVRVREGRAVNIHMFCTRRP 388
SS +P+ T +TL E+ + + S KN+
Sbjct: 61 FRESSDPNPMV-TVETL-----EKGFMIKVMSRKNEA----------------------- 91
Query: 389 GLLLSTMKALDNLGLDVQQAVISCFNGFALDVFRAEQCTEGQDVLPEQIKAVLLDS 444
G+L+ ++ ++LGLDV +A +SC + F+L + +G + E +K + ++
Sbjct: 92 GMLVCVLETFEDLGLDVVEARVSCTDTFSLHAIGSSNNDDGDCIDAEAVKQAVAEA 147
>AT2G40200.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:16791098-16792027 FORWARD
LENGTH=254
Length = 254
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 216 KWEDGDVEADFDDSGLNYESDENGNDLNSNATTVSGG------DHKG---KKKGLPAKNL 266
KW D S + SD + N N ++ S G D G K + L +
Sbjct: 9 KWSDSTTPYMVSWSLQSESSDSDWNRFNLGFSSSSFGGNFPADDCVGGIEKAESLSRSHR 68
Query: 267 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQR 312
+AE+RRR ++N L LR +VP K+D+A++L I+ +KEL Q+
Sbjct: 69 LAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQK 114
>AT3G20640.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:7210654-7213199 REVERSE
LENGTH=454
Length = 454
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 241 DLNSNATTVSGGDHK--GKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASI 298
D +SN G DH+ K+ A + +R++K+ DR+ L+ +V K D AS+
Sbjct: 313 DSSSNEVKRGGNDHQPAAKRAKSEAASPSPAFKRKEKMGDRIAALQQLVSPFGKTDAASV 372
Query: 299 LGDAIDYLKELLQRINDLHN 318
L +AI+Y+K L Q+++ L N
Sbjct: 373 LSEAIEYIKFLHQQVSALSN 392
>AT1G69010.1 | Symbols: BIM2 | BES1-interacting Myc-like protein 2 |
chr1:25941804-25943599 FORWARD LENGTH=311
Length = 311
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 243 NSNATTVSGGDHK--GKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKI-SKMDRASIL 299
+SN T S D K K + +K+ + E+RRR K+N+R +LR ++P K D AS L
Sbjct: 26 SSNTTVHSNRDSKENDKASAIRSKHSVTEQRRRSKINERFQILRELIPNSEQKRDTASFL 85
Query: 300 GDAIDYLKELLQRINDLHNELESTPPGSALPPSSSFHPLTP 340
+ IDY++ L +++ + E + PG + P+ LTP
Sbjct: 86 LEVIDYVQYLQEKV----QKYEGSYPGWSQEPTK----LTP 118