Miyakogusa Predicted Gene

Lj1g3v3904150.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3904150.1 Non Chatacterized Hit- tr|B9RGZ9|B9RGZ9_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,30.3,0.00000000007,coiled-coil,NULL; seg,NULL;
KIP1,KIP1-like,CUFF.31437.1
         (286 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G47920.1 | Symbols:  | Kinase interacting (KIP1-like) family ...    54   2e-07

>AT2G47920.1 | Symbols:  | Kinase interacting (KIP1-like) family
          protein | chr2:19616003-19616761 FORWARD LENGTH=225
          Length = 225

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 46/67 (68%), Gaps = 5/67 (7%)

Query: 21 HSQWLQTTISDLNAKMEAMMTILEG-----GTQDHVHYKWKEDLIEMLEELGQSYRVLVI 75
          HSQWLQ+T+++++AK +AM+ +L+G       +   +YK + +LI  +E+  +++R L +
Sbjct: 21 HSQWLQSTLAEIDAKTKAMLKLLDGNADSFAQRAETYYKKRPELISFVEDFYRAHRSLAV 80

Query: 76 SYNQLKS 82
          +++ LKS
Sbjct: 81 NFDHLKS 87