Miyakogusa Predicted Gene

Lj1g3v3903050.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3903050.1 Non Chatacterized Hit- tr|I1N7Z4|I1N7Z4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,91.45,0,no
description,NULL; V-ATPase_C,ATPase, V1 complex, subunit C; V-TYPE
PROTON ATPASE SUBUNIT C,NULL; ,CUFF.31457.1
         (351 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G12840.1 | Symbols: DET3, ATVHA-C | vacuolar ATP synthase sub...   596   e-171

>AT1G12840.1 | Symbols: DET3, ATVHA-C | vacuolar ATP synthase
           subunit C (VATC) / V-ATPase C subunit / vacuolar proton
           pump C subunit (DET3) | chr1:4375584-4378220 FORWARD
           LENGTH=375
          Length = 375

 Score =  596 bits (1536), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 284/351 (80%), Positives = 308/351 (87%)

Query: 1   MASRYWVVSLPVHNSASELWNQLQQNVSKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXA 60
           M SRYWVVSLPV +SAS LWN+LQ+ +SKHSFDTP+YRFNIPNLRVGT            
Sbjct: 1   MTSRYWVVSLPVKDSASSLWNRLQEQISKHSFDTPVYRFNIPNLRVGTLDSLLALGDDLL 60

Query: 61  KSNNFVEGVSHKIRRQIEELERVSAVETTALTVDGVPVDSYLTRFVWDEGKYPTMSPLKE 120
           KSN+FVEGVS KIRRQIEELER+S VE+ ALTVDGVPVDSYLTRFVWDE KYPTMSPLKE
Sbjct: 61  KSNSFVEGVSQKIRRQIEELERISGVESNALTVDGVPVDSYLTRFVWDEAKYPTMSPLKE 120

Query: 121 IVDGIHGQVAKIEDDLKVRVSEYNNIRSQLNAINRKQTGSLAVRDLSNLVKPEDIITSEH 180
           +VD I  QVAKIEDDLKVRV+EYNNIR QLNAINRKQ+GSLAVRDLSNLVKPEDI+ SEH
Sbjct: 121 VVDNIQSQVAKIEDDLKVRVAEYNNIRGQLNAINRKQSGSLAVRDLSNLVKPEDIVESEH 180

Query: 181 LTTLLAIVSKYSQKDWLASYETLTDYVVPRSSKKLYEDNEYALYTVTLFSRVADNFRNSA 240
           L TLLA+V KYSQKDWLA YETLTDYVVPRSSKKL+EDNEYALYTVTLF+RVADNFR +A
Sbjct: 181 LVTLLAVVPKYSQKDWLACYETLTDYVVPRSSKKLFEDNEYALYTVTLFTRVADNFRIAA 240

Query: 241 REKGIQVRDFEYSPETHENRKQEIDKLVQDQESLRGSLLQWCYTSYGEVFTSWMHFCAVR 300
           REKG QVRDFE S E  E RKQE+ KLVQDQESLR SLLQWCYTSYGEVF+SWMHFCAVR
Sbjct: 241 REKGFQVRDFEQSVEAQETRKQELAKLVQDQESLRSSLLQWCYTSYGEVFSSWMHFCAVR 300

Query: 301 LFAESILRYGLPPSFLACVLAPTVKAEKKVRSILEGLSDSRNSAYWKAEEE 351
            FAESI+RYGLPP+FLACVL+P VK+EKKVRSILE L DS NS YWK+EE+
Sbjct: 301 TFAESIMRYGLPPAFLACVLSPAVKSEKKVRSILERLCDSTNSLYWKSEED 351