Miyakogusa Predicted Gene
- Lj1g3v3902620.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3902620.1 tr|G7KQZ2|G7KQZ2_MEDTR CONSTANS-like zinc finger
protein OS=Medicago truncatula GN=MTR_7g108150
PE=4,46.6,4e-18,B-Box-type zinc finger,Zinc finger, B-box; seg,NULL;
ZF_BBOX,Zinc finger, B-box; SUBFAMILY NOT NAMED,CUFF.31412.1
(384 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G33500.1 | Symbols: | B-box type zinc finger protein with CC... 157 8e-39
AT2G33500.2 | Symbols: | B-box type zinc finger protein with CC... 157 9e-39
AT1G28050.1 | Symbols: | B-box type zinc finger protein with CC... 116 2e-26
AT2G47890.1 | Symbols: | B-box type zinc finger protein with CC... 101 9e-22
AT2G47890.2 | Symbols: | B-box type zinc finger protein with CC... 100 2e-21
AT1G68190.1 | Symbols: | B-box zinc finger family protein | chr... 89 4e-18
AT3G21880.1 | Symbols: | B-box type zinc finger protein with CC... 88 8e-18
AT5G48250.1 | Symbols: | B-box type zinc finger protein with CC... 87 2e-17
AT4G15250.1 | Symbols: | B-box type zinc finger protein with CC... 87 2e-17
AT3G07650.4 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 79 4e-15
AT3G07650.3 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 79 4e-15
AT3G07650.2 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 79 4e-15
AT3G07650.1 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 79 4e-15
AT5G15840.1 | Symbols: CO, FG | B-box type zinc finger protein w... 69 8e-12
AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 | chr5:858... 67 2e-11
AT5G15840.2 | Symbols: CO, FG | B-box type zinc finger protein w... 66 4e-11
AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 | chr5:517... 66 5e-11
AT3G02380.1 | Symbols: COL2, ATCOL2 | CONSTANS-like 2 | chr3:487... 65 1e-10
AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 | chr2:105... 64 2e-10
AT2G24790.2 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 | chr2:105... 63 4e-10
AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 | chr5:233... 60 3e-09
AT1G75540.1 | Symbols: STH2 | salt tolerance homolog2 | chr1:283... 60 4e-09
AT3G21890.1 | Symbols: | B-box type zinc finger family protein ... 59 6e-09
AT1G49130.1 | Symbols: | B-box type zinc finger protein with CC... 58 1e-08
AT1G49130.2 | Symbols: | B-box type zinc finger protein with CC... 58 1e-08
AT4G38960.1 | Symbols: | B-box type zinc finger family protein ... 55 9e-08
AT4G15248.1 | Symbols: | B-box type zinc finger family protein ... 53 3e-07
AT2G21320.1 | Symbols: | B-box zinc finger family protein | chr... 53 4e-07
AT4G27310.1 | Symbols: | B-box type zinc finger family protein ... 52 8e-07
AT1G06040.1 | Symbols: STO | B-box zinc finger family protein | ... 50 4e-06
AT1G06040.2 | Symbols: STO | B-box zinc finger family protein | ... 50 4e-06
AT5G54470.1 | Symbols: | B-box type zinc finger family protein ... 49 4e-06
AT4G39070.1 | Symbols: | B-box zinc finger family protein | chr... 49 8e-06
>AT2G33500.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:14188159-14190046 REVERSE LENGTH=402
Length = 402
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 185/399 (46%), Gaps = 75/399 (18%)
Query: 5 CDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRSSTDN 64
C++C ++AVL+C+AD+AKLCL CDQHVHSAN LS KHVR QIC+ C + S R TDN
Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTDN 71
Query: 65 LSLCDHCH-------SGAADSSRHRLEGFSGCPSVSEIVTALGLDLKQSCSTIATVSVPE 117
L LC C S +A R +EGFSGCPSV E+ G+DLK + +
Sbjct: 72 LVLCQECDWDVHGSCSSSATHERSAVEGFSGCPSVLELAAVWGIDLKGKKKEDDEDELTK 131
Query: 118 FEGL--------------LVVP----------SRNRRDEV-YEQLAEVAKRKKSLSEIEG 152
G+ L+VP S R +V +EQL E+ KR +EG
Sbjct: 132 NFGMGLDSWGSGSNIVQELIVPYDVSCKKQSFSFGRSKQVVFEQL-ELLKR----GFVEG 186
Query: 153 SLSLCGELKFNCGGVDDLLLQQTTPFTSLLSL-PSEFDAKNSEYGTQQGDLAWNC--NSQ 209
+ N GG + Q +P TS SL S+ N + WN +S
Sbjct: 187 EGEIMVPEGINGGGS----ISQPSPTTSFTSLLMSQSLCGNG--------MQWNATNHST 234
Query: 210 YQSPQVWDFQLQKSRDCDEARMVTFDGLEEPFLSIQNSFQNVPSMNCSTIGDDILXXXXX 269
Q+ Q+WDF L +SR+ DE V G F ++ + + + N + +
Sbjct: 235 GQNTQIWDFNLGQSRNPDEPSPVETKGSTFTFNNVTHLKNDTRTTNMNAFKESY------ 288
Query: 270 XXXXXXXXXXXXXXXXXXTRGGLSSESKFIESMTYSDTN-------MVMEHLACGNENMS 322
T+G +S+S I + +S + EH+A + +
Sbjct: 289 --------QQEDSVHSTSTKGQETSKSNNIPAAIHSHKSSNDSCGLHCTEHIAITSNRAT 340
Query: 323 TINA--KVSLEELAKNRGNAMLRYKEKKKTRRYVQYLQH 359
+ A LE++A+NR NAM RYKEKKKTRRY + +++
Sbjct: 341 RLVAVTNADLEQMAQNRDNAMQRYKEKKKTRRYDKTIRY 379
>AT2G33500.2 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:14188159-14190046 REVERSE LENGTH=401
Length = 401
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 185/399 (46%), Gaps = 76/399 (19%)
Query: 5 CDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRSSTDN 64
C++C ++AVL+C+AD+AKLCL CDQHVHSAN LS KHVR QIC+ C + S R TDN
Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTDN 71
Query: 65 LSLCDHCH-------SGAADSSRHRLEGFSGCPSVSEIVTALGLDLKQSCSTIATVSVPE 117
L LC C S +A R +EGFSGCPSV E+ G+DLK + +
Sbjct: 72 LVLCQECDWDVHGSCSSSATHERSAVEGFSGCPSVLELAAVWGIDLKGKKKEDDEDELTK 131
Query: 118 FEGL--------------LVVP----------SRNRRDEV-YEQLAEVAKRKKSLSEIEG 152
G+ L+VP S R +V +EQL E+ KR +EG
Sbjct: 132 NFGMGLDSWGSGSNIVQELIVPYDVSCKKQSFSFGRSKQVVFEQL-ELLKR----GFVEG 186
Query: 153 SLSLCGELKFNCGGVDDLLLQQTTPFTSLLSL-PSEFDAKNSEYGTQQGDLAWNC--NSQ 209
+ N GG + Q +P TS SL S+ N + WN +S
Sbjct: 187 EGEIMVPEGINGGGS----ISQPSPTTSFTSLLMSQSLCGNG--------MQWNATNHST 234
Query: 210 YQSPQVWDFQLQKSRDCDEARMVTFDGLEEPFLSIQNSFQNVPSMNCSTIGDDILXXXXX 269
Q+ Q+WDF L +SR+ DE V G F ++ + + + N + +
Sbjct: 235 GQNTQIWDFNLGQSRNPDEPSPVETKGSTFTFNNVTHLKNDTRTTNMNAFKESY------ 288
Query: 270 XXXXXXXXXXXXXXXXXXTRGGLSSESKFIESMTYSDTN-------MVMEHLACGNENMS 322
T+G +S+S I + +S + EH+A + +
Sbjct: 289 ---------QEDSVHSTSTKGQETSKSNNIPAAIHSHKSSNDSCGLHCTEHIAITSNRAT 339
Query: 323 TINA--KVSLEELAKNRGNAMLRYKEKKKTRRYVQYLQH 359
+ A LE++A+NR NAM RYKEKKKTRRY + +++
Sbjct: 340 RLVAVTNADLEQMAQNRDNAMQRYKEKKKTRRYDKTIRY 378
>AT1G28050.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:9775768-9777657 REVERSE LENGTH=433
Length = 433
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 71/108 (65%), Gaps = 7/108 (6%)
Query: 5 CDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRSSTDN 64
CD+C ++AVL+C+AD+AKLCL CDQ VH+AN LS KHVR QIC+ C N+ S R TDN
Sbjct: 9 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDN 68
Query: 65 LSLCDHC----HSGAADSSRH---RLEGFSGCPSVSEIVTALGLDLKQ 105
L LC C H + S H +EGFSGCPS E+ GLDL+Q
Sbjct: 69 LILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSALELAALWGLDLEQ 116
>AT2G47890.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:19608245-19609476 FORWARD LENGTH=332
Length = 332
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 66/103 (64%), Gaps = 5/103 (4%)
Query: 5 CDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRSSTDN 64
CDYCDS A++YCKADSAKLCL CD+ VH AN L KH R +C++C +S T+
Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETER 72
Query: 65 LSLCDHC---HSGAADS--SRHRLEGFSGCPSVSEIVTALGLD 102
LC +C H A+ S SR EGF+GCPSV E++ +GLD
Sbjct: 73 SVLCQNCDWQHHTASSSLHSRRPFEGFTGCPSVPELLAIVGLD 115
>AT2G47890.2 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:19608245-19609036 FORWARD LENGTH=237
Length = 237
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 66/103 (64%), Gaps = 5/103 (4%)
Query: 5 CDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRSSTDN 64
CDYCDS A++YCKADSAKLCL CD+ VH AN L KH R +C++C +S T+
Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETER 72
Query: 65 LSLCDHC---HSGAADS--SRHRLEGFSGCPSVSEIVTALGLD 102
LC +C H A+ S SR EGF+GCPSV E++ +GLD
Sbjct: 73 SVLCQNCDWQHHTASSSLHSRRPFEGFTGCPSVPELLAIVGLD 115
>AT1G68190.1 | Symbols: | B-box zinc finger family protein |
chr1:25559384-25561004 FORWARD LENGTH=356
Length = 356
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 106/237 (44%), Gaps = 24/237 (10%)
Query: 5 CDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRSSTDN 64
C++C + AV+YC AD+A LCL CD VHSAN+LS +H+R +C++C+N R
Sbjct: 14 CEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKNQPCVVRCFDHK 73
Query: 65 LSLCDHC----HSGAADSSRHR-LEGFSGCPSVSEIVTALGLDLKQSCSTIATVSVPEFE 119
+ LC C H G + R R L ++GCP + G + ++ E
Sbjct: 74 MFLCHGCNDKFHGGGSSEHRRRDLRCYTGCPPAKDFAVMWGFRVMDDDDDVSL----EQS 129
Query: 120 GLLVVPSRNRRDE-VYEQLAEVAKRKKSLSEIEGSLSLCGELKFNCGGVDDLLLQQTTPF 178
+V P R + EQ+ E+ K + L E GS SL G L L + P
Sbjct: 130 FRMVKPKVQREGGFILEQILELEKVQ--LREENGSSSLTER-----GDPSPLELPK-KPE 181
Query: 179 TSLLSLPSE-----FDAKNSEYGTQQGDLAWNCNSQY-QSPQVWDFQLQKSRDCDEA 229
L+ LP D + + GD W C S Y ++ Q+W +Q C++
Sbjct: 182 EQLIDLPQTGKELVVDFSHLSSSSTLGDSFWECKSPYNKNNQLWHQNIQDIGVCEDT 238
>AT3G21880.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr3:7706748-7708093 FORWARD LENGTH=364
Length = 364
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 5/100 (5%)
Query: 1 MPFRCDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRS 60
M +CD+C + A++YCK+D AKLCL CD HVHSAN LS +H+R ICE C + A+ R
Sbjct: 1 MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFSQPAAIRC 60
Query: 61 STDNLSLCDHCHSGAADSSR--HR---LEGFSGCPSVSEI 95
+ +S C CH ++ S HR L FSGCPS ++
Sbjct: 61 LDEKVSYCQGCHWHESNCSELGHRVQSLNPFSGCPSPTDF 100
>AT5G48250.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr5:19561719-19563113 REVERSE LENGTH=373
Length = 373
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 76/133 (57%), Gaps = 9/133 (6%)
Query: 1 MPFRCDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRS 60
M + CD+C + +++YC++D+A LCL CD++VHSANALS +H R +CE C AS R
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRC 60
Query: 61 STDNLSLCDHC----HSGAADSS-----RHRLEGFSGCPSVSEIVTALGLDLKQSCSTIA 111
S + +SLC +C H G ++ R + +SGCPS +E+ + + + S+
Sbjct: 61 SDERVSLCQNCDWSGHDGKNSTTTSHHKRQTINCYSGCPSSAELSSIWSFCMDLNISSAE 120
Query: 112 TVSVPEFEGLLVV 124
+ + GL+ +
Sbjct: 121 ESACEQGMGLMTI 133
>AT4G15250.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr4:8709942-8711106 REVERSE LENGTH=330
Length = 330
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 1 MPFRCDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRS 60
M RCD+C ++ A++YCK+DSAKLCL CD +VHSAN LS +H R +CE C +
Sbjct: 1 MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPTAVHC 60
Query: 61 STDNLSLCDHCHSGAADSS--RHRLEG---FSGCPSVSEIVTALGLDLKQSCSTIAT 112
+N+SLC C A++ + HRL+ +S CPS S+ L+ S +++ +
Sbjct: 61 MNENVSLCQGCQWTASNCTGLGHRLQSLNPYSDCPSPSDFGKIWSSTLEPSVTSLVS 117
>AT3G07650.4 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 103/232 (44%), Gaps = 55/232 (23%)
Query: 1 MPFRCDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRS 60
M + CD+C + +++YC++D+A LCL CD+ VHSANALS +H R +CE C A+ R
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRC 60
Query: 61 STDNLSLCDHC----------------HSGAADSSRHRLEGFSGCPSVSEI--VTALGLD 102
+ +SLC +C + R + +SGCPS SE+ + + LD
Sbjct: 61 VEERVSLCQNCDWSGHNNSNNNNSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSFCLD 120
Query: 103 L----------------------KQSCST------IATVSVPEFEGLLVVPSRNRR---- 130
L K++C+ + + S+PE + S + +
Sbjct: 121 LAGQSICEQELGMMNIDDDGPTDKKTCNEDKKDVLVGSSSIPETSSVPQGKSSSAKDVGM 180
Query: 131 --DEVYEQLA--EVAKRKKSLSEIEGSLSLCGELKFNCGGVDDLLLQ-QTTP 177
D+ Y L EV ++ E+ G+ E F GG+D L + QT P
Sbjct: 181 CEDDFYGNLGMDEVDMALENYEELFGTAFNPSEELFGHGGIDSLFHKHQTAP 232
>AT3G07650.3 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 103/232 (44%), Gaps = 55/232 (23%)
Query: 1 MPFRCDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRS 60
M + CD+C + +++YC++D+A LCL CD+ VHSANALS +H R +CE C A+ R
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRC 60
Query: 61 STDNLSLCDHC----------------HSGAADSSRHRLEGFSGCPSVSEI--VTALGLD 102
+ +SLC +C + R + +SGCPS SE+ + + LD
Sbjct: 61 VEERVSLCQNCDWSGHNNSNNNNSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSFCLD 120
Query: 103 L----------------------KQSCST------IATVSVPEFEGLLVVPSRNRR---- 130
L K++C+ + + S+PE + S + +
Sbjct: 121 LAGQSICEQELGMMNIDDDGPTDKKTCNEDKKDVLVGSSSIPETSSVPQGKSSSAKDVGM 180
Query: 131 --DEVYEQLA--EVAKRKKSLSEIEGSLSLCGELKFNCGGVDDLLLQ-QTTP 177
D+ Y L EV ++ E+ G+ E F GG+D L + QT P
Sbjct: 181 CEDDFYGNLGMDEVDMALENYEELFGTAFNPSEELFGHGGIDSLFHKHQTAP 232
>AT3G07650.2 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 103/232 (44%), Gaps = 55/232 (23%)
Query: 1 MPFRCDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRS 60
M + CD+C + +++YC++D+A LCL CD+ VHSANALS +H R +CE C A+ R
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRC 60
Query: 61 STDNLSLCDHC----------------HSGAADSSRHRLEGFSGCPSVSEI--VTALGLD 102
+ +SLC +C + R + +SGCPS SE+ + + LD
Sbjct: 61 VEERVSLCQNCDWSGHNNSNNNNSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSFCLD 120
Query: 103 L----------------------KQSCST------IATVSVPEFEGLLVVPSRNRR---- 130
L K++C+ + + S+PE + S + +
Sbjct: 121 LAGQSICEQELGMMNIDDDGPTDKKTCNEDKKDVLVGSSSIPETSSVPQGKSSSAKDVGM 180
Query: 131 --DEVYEQLA--EVAKRKKSLSEIEGSLSLCGELKFNCGGVDDLLLQ-QTTP 177
D+ Y L EV ++ E+ G+ E F GG+D L + QT P
Sbjct: 181 CEDDFYGNLGMDEVDMALENYEELFGTAFNPSEELFGHGGIDSLFHKHQTAP 232
>AT3G07650.1 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 103/232 (44%), Gaps = 55/232 (23%)
Query: 1 MPFRCDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRS 60
M + CD+C + +++YC++D+A LCL CD+ VHSANALS +H R +CE C A+ R
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRC 60
Query: 61 STDNLSLCDHC----------------HSGAADSSRHRLEGFSGCPSVSEI--VTALGLD 102
+ +SLC +C + R + +SGCPS SE+ + + LD
Sbjct: 61 VEERVSLCQNCDWSGHNNSNNNNSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSFCLD 120
Query: 103 L----------------------KQSCST------IATVSVPEFEGLLVVPSRNRR---- 130
L K++C+ + + S+PE + S + +
Sbjct: 121 LAGQSICEQELGMMNIDDDGPTDKKTCNEDKKDVLVGSSSIPETSSVPQGKSSSAKDVGM 180
Query: 131 --DEVYEQLA--EVAKRKKSLSEIEGSLSLCGELKFNCGGVDDLLLQ-QTTP 177
D+ Y L EV ++ E+ G+ E F GG+D L + QT P
Sbjct: 181 CEDDFYGNLGMDEVDMALENYEELFGTAFNPSEELFGHGGIDSLFHKHQTAP 232
>AT5G15840.1 | Symbols: CO, FG | B-box type zinc finger protein with
CCT domain | chr5:5171343-5172697 REVERSE LENGTH=373
Length = 373
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 5 CDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRSSTDN 64
CD C S + +YC ADSA LC+ CD VHSAN ++ +H R ++CE+C+ A+ D+
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEADD 79
Query: 65 LSLCDHC----HSGAADSSRHR 82
SLC C HS + RH+
Sbjct: 80 ASLCTACDSEVHSANPLARRHQ 101
>AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 |
chr5:8589325-8590949 FORWARD LENGTH=406
Length = 406
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 5 CDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRSSTDN 64
CD C S +A LYC+ D+A LCL CD VH+AN L+ +H R +CE C+ A D
Sbjct: 50 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADA 109
Query: 65 LSLCDHC----HSGAADSSRH 81
+LC C HS + RH
Sbjct: 110 AALCVTCDRDIHSANPLARRH 130
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 3 FRCDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQI 47
+ C+ C+ A + CKAD+A LC+ CD+ +HSAN L+ +H R +
Sbjct: 91 WMCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPV 135
>AT5G15840.2 | Symbols: CO, FG | B-box type zinc finger protein with
CCT domain | chr5:5171873-5172697 REVERSE LENGTH=274
Length = 274
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 5 CDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRSSTDN 64
CD C S + +YC ADSA LC+ CD VHSAN ++ +H R ++CE+C+ A+ D+
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEADD 79
Query: 65 LSLCDHC----HSGAADSSRHR 82
SLC C HS + RH+
Sbjct: 80 ASLCTACDSEVHSANPLARRHQ 101
>AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 |
chr5:5176297-5177473 REVERSE LENGTH=355
Length = 355
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 5 CDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRSSTDN 64
CD C S + +YC+ADSA LC CD VH+AN L+ +H R ++C++C+ A+ D
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKADA 71
Query: 65 LSLCDHC----HSGAADSSRHR 82
SLC C HS + RH+
Sbjct: 72 ASLCTTCDSEIHSANPLARRHQ 93
>AT3G02380.1 | Symbols: COL2, ATCOL2 | CONSTANS-like 2 |
chr3:487438-488624 REVERSE LENGTH=347
Length = 347
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 5 CDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRSSTDN 64
CD C S + +YC+ADSA LC CD VH+AN ++ +H R ++C++C++ A+ D
Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKADA 75
Query: 65 LSLCDHC----HSGAADSSRHR 82
SLC C HS + RH+
Sbjct: 76 ASLCTACDAEIHSANPLARRHQ 97
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 5 CDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAAS---SRSS 61
C C+S A CKAD+A LC CD +HSAN L+ +H R I N +S S +
Sbjct: 59 CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSANSCSSMAPSETD 118
Query: 62 TDN 64
DN
Sbjct: 119 ADN 121
>AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 |
chr2:10566959-10567946 FORWARD LENGTH=294
Length = 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 5 CDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRSSTDN 64
CD C S +A L+C+AD+A LC CD +H+AN L+ +H R +CE C+ A D
Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKADA 67
Query: 65 LSLCDHC----HSGAADSSRH 81
+LC C HS S RH
Sbjct: 68 AALCVTCDRDIHSANPLSRRH 88
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 5 CDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQI 47
C+ C+ A + CKAD+A LC+ CD+ +HSAN LS +H R I
Sbjct: 51 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPI 93
>AT2G24790.2 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 |
chr2:10566959-10567621 FORWARD LENGTH=220
Length = 220
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 5 CDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRSSTDN 64
CD C S +A L+C+AD+A LC CD +H+AN L+ +H R +CE C+ A D
Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKADA 67
Query: 65 LSLCDHC----HSGAADSSRH 81
+LC C HS S RH
Sbjct: 68 AALCVTCDRDIHSANPLSRRH 88
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 3 FRCDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQI 47
+ C+ C+ A + CKAD+A LC+ CD+ +HSAN LS +H R I
Sbjct: 49 WLCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPI 93
>AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 |
chr5:23355573-23356729 FORWARD LENGTH=355
Length = 355
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 13/121 (10%)
Query: 5 CDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRSSTDN 64
CD C S +A ++C+ DSA LC+ CD +HS +H R +CE C+ A+ D
Sbjct: 22 CDACKSVTAAVFCRVDSAFLCIACDTRIHSFT----RHERVWVCEVCEQAPAAVTCKADA 77
Query: 65 LSLCDHC----HSGAADSSRHR---LEGF--SGCPSVSEIVTALGLDLKQSCSTIATVSV 115
+LC C HS +SRH +E F S +V++I + + S +T+ +V
Sbjct: 78 AALCVSCDADIHSANPLASRHERVPVETFFDSAETAVAKISASSTFGILGSSTTVDLTAV 137
Query: 116 P 116
P
Sbjct: 138 P 138
>AT1G75540.1 | Symbols: STH2 | salt tolerance homolog2 |
chr1:28366059-28367398 FORWARD LENGTH=331
Length = 331
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 1 MPFRCDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRH------------QIC 48
M RCD CD + A ++C AD A LC CD VH AN L+ KH+R +C
Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60
Query: 49 EACQNDAASSRSSTDNLSLCDHCHSGAADSSRH 81
+ CQ+ A D LC C S ++ H
Sbjct: 61 DICQDKKALLFCQQDRAILCKDCDSSIHAANEH 93
>AT3G21890.1 | Symbols: | B-box type zinc finger family protein |
chr3:7709298-7709663 REVERSE LENGTH=121
Length = 121
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 1 MPFRCDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQ 52
+P RC+ CD ++V +C+ADSA LC CD+ VH AN L+ +HVR +C +CQ
Sbjct: 27 VPVRCELCDGDASV-FCEADSAFLCRKCDRWVHGANFLAWRHVRRVLCTSCQ 77
>AT1G49130.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:18174741-18175936 REVERSE LENGTH=326
Length = 326
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 59/133 (44%), Gaps = 18/133 (13%)
Query: 2 PFRCDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRSS 61
P C+ C +K AV YC +D A LC +CD+ VHSAN ++ KH R +C + R
Sbjct: 25 PRACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHER--VCLRTNEISNDVRGG 82
Query: 62 TDNLSLCDHCHSG---AADSSRHRLEGFSGC----------PSVSEIVTALGLDLKQSCS 108
T +L HSG A + R R E P V EI + + ++
Sbjct: 83 T---TLTSVWHSGFRRKARTPRSRYEKKPQQKIDDERRREDPRVPEIGGEVMFFIPEAND 139
Query: 109 TIATVSVPEFEGL 121
T VPEFEG
Sbjct: 140 DDMTSLVPEFEGF 152
>AT1G49130.2 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:18174741-18175811 REVERSE LENGTH=319
Length = 319
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 59/133 (44%), Gaps = 18/133 (13%)
Query: 2 PFRCDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRSS 61
P C+ C +K AV YC +D A LC +CD+ VHSAN ++ KH R +C + R
Sbjct: 18 PRACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHER--VCLRTNEISNDVRGG 75
Query: 62 TDNLSLCDHCHSG---AADSSRHRLEG----------FSGCPSVSEIVTALGLDLKQSCS 108
T +L HSG A + R R E P V EI + + ++
Sbjct: 76 T---TLTSVWHSGFRRKARTPRSRYEKKPQQKIDDERRREDPRVPEIGGEVMFFIPEAND 132
Query: 109 TIATVSVPEFEGL 121
T VPEFEG
Sbjct: 133 DDMTSLVPEFEGF 145
>AT4G38960.1 | Symbols: | B-box type zinc finger family protein |
chr4:18161576-18163045 FORWARD LENGTH=183
Length = 183
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 1 MPFRCDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQI--------CEACQ 52
M CD C++ +A+++C AD A LC CD+ VH N L+ +HVR + C+ C+
Sbjct: 1 MRILCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPSNAPCCDICE 60
Query: 53 NDAASSRSSTDNLSLCDHC 71
N A D SLC C
Sbjct: 61 NAPAFFYCEIDGSSLCLQC 79
>AT4G15248.1 | Symbols: | B-box type zinc finger family protein |
chr4:8708881-8709234 FORWARD LENGTH=117
Length = 117
Score = 53.1 bits (126), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 2 PFRCDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQ 52
P C+ C ++A +YC+AD+A LC CD+ VHSAN L+ +H+R IC C+
Sbjct: 29 PVSCELC-GENATVYCEADAAFLCRKCDRWVHSANFLARRHLRRVICTTCR 78
>AT2G21320.1 | Symbols: | B-box zinc finger family protein |
chr2:9126502-9127652 FORWARD LENGTH=172
Length = 172
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 1 MPFRCDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQI--------CEACQ 52
M CD C+S +A+++C AD A LC CD+ VH N L+ +H+R + C+ C+
Sbjct: 1 MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE 60
Query: 53 NDAASSRSSTDNLSLCDHC----HSGAADSSR 80
N A D SLC C H G + R
Sbjct: 61 NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHR 92
>AT4G27310.1 | Symbols: | B-box type zinc finger family protein |
chr4:13675853-13676616 FORWARD LENGTH=223
Length = 223
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 1 MPFRCDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQN 53
M +CD C+ A +YC++D A LC CD VH AN L KH R +C ACQ+
Sbjct: 1 MGKKCDLCNG-VARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQS 52
>AT1G06040.1 | Symbols: STO | B-box zinc finger family protein |
chr1:1828662-1829659 REVERSE LENGTH=248
Length = 248
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 13/95 (13%)
Query: 1 MPFRCDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQI---------CEAC 51
M +CD C+ A + C AD A LC CD +H+AN L+ KH R + C+ C
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60
Query: 52 QNDAASSRSSTDNLSLCDHC----HSGAADSSRHR 82
Q AA D LC C H + S+ H+
Sbjct: 61 QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQ 95
>AT1G06040.2 | Symbols: STO | B-box zinc finger family protein |
chr1:1828957-1829659 REVERSE LENGTH=177
Length = 177
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 13/95 (13%)
Query: 1 MPFRCDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQI---------CEAC 51
M +CD C+ A + C AD A LC CD +H+AN L+ KH R + C+ C
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60
Query: 52 QNDAASSRSSTDNLSLCDHC----HSGAADSSRHR 82
Q AA D LC C H + S+ H+
Sbjct: 61 QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQ 95
>AT5G54470.1 | Symbols: | B-box type zinc finger family protein |
chr5:22114584-22115315 REVERSE LENGTH=215
Length = 215
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 4 RCDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDA---ASSRS 60
+C+ C A +YC++D A LC CD VH AN L KH+R +C ACQ+ AS +
Sbjct: 5 KCELC-CGVARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSACQSHTPWKASGLN 63
Query: 61 STDNLSLCDHC 71
+S+C+ C
Sbjct: 64 LGPTVSICESC 74
>AT4G39070.1 | Symbols: | B-box zinc finger family protein |
chr4:18205061-18206421 REVERSE LENGTH=242
Length = 242
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 10/71 (14%)
Query: 1 MPFRCDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRS 60
M C CD + A ++C AD A LC CD+HVH AN L+ KH+R + DA
Sbjct: 1 MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAP---- 56
Query: 61 STDNLSLCDHC 71
LCD C
Sbjct: 57 ------LCDIC 61