Miyakogusa Predicted Gene

Lj1g3v3891960.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3891960.2 Non Chatacterized Hit- tr|K3ZJM6|K3ZJM6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si026779,58.82,0.00000000004,seg,NULL,CUFF.31357.2
         (368 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G26950.1 | Symbols:  | unknown protein; Has 27 Blast hits to ...   480   e-136

>AT3G26950.1 | Symbols:  | unknown protein; Has 27 Blast hits to 27
           proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa
           - 0; Fungi - 0; Plants - 27; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr3:9941202-9943411 REVERSE LENGTH=548
          Length = 548

 Score =  480 bits (1235), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 229/367 (62%), Positives = 275/367 (74%), Gaps = 5/367 (1%)

Query: 1   MKEIKHLWRQNGCESKYGRQLVMRTDDFEKPAQTNVLCSNWKEWEQPIIWFQGTTDHVAA 60
           M E+KHLWRQNGC  KY R+LVMR DDFEKPA++NVLCSNWK+WE+ IIWFQGTTD VAA
Sbjct: 181 MSEVKHLWRQNGCVKKYKRRLVMRLDDFEKPAKSNVLCSNWKKWEEAIIWFQGTTDAVAA 240

Query: 61  QFFLKNIHSQMRIAAFDLFGDPKVLGSRPNVFGELMRVLISPTKDVEAAVNWVIGGEENP 120
           QFFLKN+H +MR AAF+LFG+      R NVFGELM  LISPTKDV+ AV+WV+    +P
Sbjct: 241 QFFLKNVHPEMRAAAFELFGEQGNSAPRGNVFGELMMSLISPTKDVKEAVDWVLHETGDP 300

Query: 121 DITLHMRMLMNRSIRAVQAALLCIKKAIQSQHLMSRPKVVVVSDTPSLVKSIIPNISEFA 180
           DI++HMRMLM++S+R ++AA+ C+ KAI    +   P+VV+VSDTPS+VK I  NIS  A
Sbjct: 301 DISVHMRMLMSKSVRPMRAAINCLGKAINRLGI-PNPRVVIVSDTPSVVKIIKTNISTIA 359

Query: 181 EVLHFDYEKFKGSIFD---GLPKSDFRVKDWGPAPRWVAFVDFFLASRARYAVISGAHRR 237
           EVLHFDY+ F+G I     GLP  DFR+KDWGPAPRWVAFVDFFLA RA++AVISGA+RR
Sbjct: 360 EVLHFDYKLFRGDIAQRGRGLPMLDFRIKDWGPAPRWVAFVDFFLACRAKHAVISGANRR 419

Query: 238 VGTTYXXXXXXXXXXRNLGDNXXXXXXXXXXXXXXXNLLTDGLKNQVGWGHVWNRYAGPL 297
           VGTTY           +L D                NLL DGLKNQVGWGHVWNRYAGPL
Sbjct: 420 VGTTYAQLVAALAAANSLKDG-SSNSSFAFLSSFQSNLLADGLKNQVGWGHVWNRYAGPL 478

Query: 298 SCPNQSNQCAFTPLLPPGWWDGIWQSPIPRDVNRLASYGVQLSSIGTIDFDSLQNYCNSR 357
           SCP Q NQCAFTPL PPGWWDGIWQSPIPRD  RLA++G++LS  GT++ D    YC+++
Sbjct: 479 SCPKQPNQCAFTPLAPPGWWDGIWQSPIPRDTRRLAAFGIELSGFGTVNEDRFHAYCSAK 538

Query: 358 RSVLKTI 364
           +  + T+
Sbjct: 539 KEYVSTV 545