Miyakogusa Predicted Gene

Lj1g3v3891960.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3891960.1 Non Chatacterized Hit- tr|K3ZJC1|K3ZJC1_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si026674,61.29,0.0000000000003,seg,NULL,CUFF.31357.1
         (308 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G26950.1 | Symbols:  | unknown protein; Has 27 Blast hits to ...   369   e-102

>AT3G26950.1 | Symbols:  | unknown protein; Has 27 Blast hits to 27
           proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa
           - 0; Fungi - 0; Plants - 27; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr3:9941202-9943411 REVERSE LENGTH=548
          Length = 548

 Score =  369 bits (948), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 183/288 (63%), Positives = 217/288 (75%), Gaps = 5/288 (1%)

Query: 25  GVGLLLLAIRPLDPPIRVDFPRDFEXXXXX----XXXXXXXXXXXXXEKPCATVEEMGRD 80
           G GLLLL +R +DP        D E                       K CATVEEMG +
Sbjct: 26  GFGLLLLTLRSVDPNSSFIDDDDDESESEEASRWSNSSSIGEAMVDGAKLCATVEEMGSE 85

Query: 81  FEAGVVGMETVRVRRIIEDHFVLNGASRIRDLPPDQFCSHGFVLGKTAEAGFGNEMYKVL 140
           F+ G V  +++RVR +I  HF +NGAS IR+LPP+QFC HG+VLGKTAEAGFGNEMYK+L
Sbjct: 86  FDGGFVD-QSLRVRDVIHRHFQINGASAIRELPPEQFCRHGYVLGKTAEAGFGNEMYKIL 144

Query: 141 TAAALSIMLNRSLIIGQTRGKYPFGEYISYSNFTFTMKEIKHLWRQNGCESKYGRQLVMR 200
           T+AALSIMLNRSLIIGQTRGKYPFG+YI+YSN TFTM E+KHLWRQNGC  KY R+LVMR
Sbjct: 145 TSAALSIMLNRSLIIGQTRGKYPFGDYIAYSNATFTMSEVKHLWRQNGCVKKYKRRLVMR 204

Query: 201 TDDFEKPAQTNVLCSNWKEWEQPIIWFQGTTDHVAAQFFLKNIHSQMRIAAFDLFGDPKV 260
            DDFEKPA++NVLCSNWK+WE+ IIWFQGTTD VAAQFFLKN+H +MR AAF+LFG+   
Sbjct: 205 LDDFEKPAKSNVLCSNWKKWEEAIIWFQGTTDAVAAQFFLKNVHPEMRAAAFELFGEQGN 264

Query: 261 LGSRPNVFGELMRVLISPTKDVEAAVNWVIGGEENPDITLHMRMLMNR 308
              R NVFGELM  LISPTKDV+ AV+WV+    +PDI++HMRMLM++
Sbjct: 265 SAPRGNVFGELMMSLISPTKDVKEAVDWVLHETGDPDISVHMRMLMSK 312