Miyakogusa Predicted Gene

Lj1g3v3858520.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3858520.1 Non Chatacterized Hit- tr|J3L7C1|J3L7C1_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G5,30,2e-16,seg,NULL,CUFF.31441.1
         (417 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G27430.1 | Symbols:  | GYF domain-containing protein | chr1:9...    54   2e-07
AT1G24300.1 | Symbols:  | GYF domain-containing protein | chr1:8...    49   7e-06
AT1G24300.2 | Symbols:  | GYF domain-containing protein | chr1:8...    49   8e-06

>AT1G27430.1 | Symbols:  | GYF domain-containing protein |
            chr1:9521045-9526928 REVERSE LENGTH=1492
          Length = 1492

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 107/228 (46%), Gaps = 34/228 (14%)

Query: 76   MDGERHFGRSWPINETGQLVRN-PSSHQLGHSAGFNVSDIHKQQQRLVAQEEQLNYLGRN 134
            ++ +RH    WP + + QL+R  P  H+   SAGF   D H+QQQR    E+Q + L RN
Sbjct: 975  LEEQRHIDPLWPSDHSDQLLRTHPGIHRSHSSAGFRPLDFHQQQQR-PHFEDQFSQLERN 1033

Query: 135  HLEQNQ-RGFYDPSSMMFERSSPGS----------VQGRELLERRRYMHPAEQLG---PV 180
               Q Q R       + FERS+ G            QG EL +   +M  + +LG   P 
Sbjct: 1034 RSYQQQLRLELLEHGLPFERSASGLNLDAVNGLGLSQGLELRDATAHMQSSGRLGNSTPG 1093

Query: 181  SSHH---LQSSDDLFGH-----HSLSGNNGHVENNWIDPRVQ------QHLEAVRQRRDL 226
             SH    +   +  F H        SG +  +  +W + + +      +H +   + R L
Sbjct: 1094 FSHQNPRIPLGESHFSHLEPTEGRWSGADTQLAGDWAESQFRRSNMDTEHDKMRSEIRRL 1153

Query: 227  GDTIASADLNIPSAGAHEESSARGFMDLLHQKLGLQSSQSSNVDKWHP 274
            G+   S  +     G+ ++ S + FM+LLHQ+ G QS++S N+++ +P
Sbjct: 1154 GEDPNSWMV----GGSTDDKSKQLFMELLHQRPGHQSAESPNMNRGYP 1197


>AT1G24300.1 | Symbols:  | GYF domain-containing protein |
            chr1:8614515-8620420 REVERSE LENGTH=1495
          Length = 1495

 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 127/312 (40%), Gaps = 53/312 (16%)

Query: 6    HSLRNLDPSMEQIIQANMGLNAVQGRQADLSDLLL----QARHGNIL---------PSEX 52
            H  +N  P +EQ+   N G    +G Q +L + LL    Q+++G +          P+  
Sbjct: 894  HPSQNFAPYIEQLAAGNFGQLPHEGHQRELLEQLLSTKMQSQYGPMQSPYGQLQSEPTRS 953

Query: 53   XXXXXXXXXXXXXXXXXXXXXXGMDGERHFGRSWPINETGQLVRN-PSSHQLGHSAGFNV 111
                                   ++ +RH    WP +   QL+R+ P   +   S GF  
Sbjct: 954  LEYQLLQQEQLMQLANGVRHNTLLEEQRHIDPLWPSDHNDQLLRSHPGIQRSRSSTGFRQ 1013

Query: 112  SDIHKQQQRLVAQEEQLNYLGRNHLEQNQ-RGFYDPSSMMFERSS--PGSV--------- 159
             D H+QQQR    E+Q   L RN L Q Q R       + FERS+  P SV         
Sbjct: 1014 LDFHQQQQR-PPFEDQFGQLERNLLYQQQLRQELFEQGLPFERSASLPVSVSGMNLDPVN 1072

Query: 160  -----QGRELLERRRYMHPA-EQLG--------PVSSHHLQSSDDLFGHHSLSGNNGHVE 205
                 QG EL +   +M      LG        P+   H    + + G    SG +  V 
Sbjct: 1073 GLGLSQGLELRDATTHMQIGNSTLGFNHQNPRIPIGEPHFSQLESMEGR--WSGADTQVV 1130

Query: 206  NNWIDPRV------QQHLEAVRQRRDLGDTIASADLNIPSAGAHEESSARGFMDLLHQKL 259
             +W + ++       +H +   + R +G+   S  L     G  E+ S + FM+LLHQ+ 
Sbjct: 1131 GDWAESQLHRSNIDAEHHKMRSESRRMGEDSNSWML----GGTTEDRSKQLFMELLHQRP 1186

Query: 260  GLQSSQSSNVDK 271
            G QS++S ++++
Sbjct: 1187 GHQSAESPSMNR 1198


>AT1G24300.2 | Symbols:  | GYF domain-containing protein |
            chr1:8614515-8620420 REVERSE LENGTH=1490
          Length = 1490

 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 127/312 (40%), Gaps = 53/312 (16%)

Query: 6    HSLRNLDPSMEQIIQANMGLNAVQGRQADLSDLLL----QARHGNIL---------PSEX 52
            H  +N  P +EQ+   N G    +G Q +L + LL    Q+++G +          P+  
Sbjct: 889  HPSQNFAPYIEQLAAGNFGQLPHEGHQRELLEQLLSTKMQSQYGPMQSPYGQLQSEPTRS 948

Query: 53   XXXXXXXXXXXXXXXXXXXXXXGMDGERHFGRSWPINETGQLVRN-PSSHQLGHSAGFNV 111
                                   ++ +RH    WP +   QL+R+ P   +   S GF  
Sbjct: 949  LEYQLLQQEQLMQLANGVRHNTLLEEQRHIDPLWPSDHNDQLLRSHPGIQRSRSSTGFRQ 1008

Query: 112  SDIHKQQQRLVAQEEQLNYLGRNHLEQNQ-RGFYDPSSMMFERSS--PGSV--------- 159
             D H+QQQR    E+Q   L RN L Q Q R       + FERS+  P SV         
Sbjct: 1009 LDFHQQQQR-PPFEDQFGQLERNLLYQQQLRQELFEQGLPFERSASLPVSVSGMNLDPVN 1067

Query: 160  -----QGRELLERRRYMHPA-EQLG--------PVSSHHLQSSDDLFGHHSLSGNNGHVE 205
                 QG EL +   +M      LG        P+   H    + + G    SG +  V 
Sbjct: 1068 GLGLSQGLELRDATTHMQIGNSTLGFNHQNPRIPIGEPHFSQLESMEGR--WSGADTQVV 1125

Query: 206  NNWIDPRV------QQHLEAVRQRRDLGDTIASADLNIPSAGAHEESSARGFMDLLHQKL 259
             +W + ++       +H +   + R +G+   S  L     G  E+ S + FM+LLHQ+ 
Sbjct: 1126 GDWAESQLHRSNIDAEHHKMRSESRRMGEDSNSWML----GGTTEDRSKQLFMELLHQRP 1181

Query: 260  GLQSSQSSNVDK 271
            G QS++S ++++
Sbjct: 1182 GHQSAESPSMNR 1193