Miyakogusa Predicted Gene

Lj1g3v3848490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3848490.1 Non Chatacterized Hit- tr|D8TD58|D8TD58_SELML
Putative uncharacterized protein OS=Selaginella
moelle,36.11,4e-19,Profilin (actin-binding protein),Profilin/allergen;
Profilin,Profilin/allergen,
NODE_26006_length_1009_cov_21.000992.path2.1
         (147 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G19400.1 | Symbols:  | Profilin family protein | chr4:1058103...   213   4e-56
AT4G19410.2 | Symbols:  | Pectinacetylesterase family protein | ...   211   1e-55

>AT4G19400.1 | Symbols:  | Profilin family protein |
           chr4:10581037-10581909 REVERSE LENGTH=148
          Length = 148

 Score =  213 bits (542), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 97/146 (66%), Positives = 120/146 (82%), Gaps = 1/146 (0%)

Query: 1   MDWGFVHKTWDKWAST-NIGYSGYPLKAALLINYDPTGPSRLLSTVAEQEGMKANPIELS 59
           MD  FV + WDKW +T N+G SG PLKAA+LINYDPTGPSRLLST+A+QEG+   P++L 
Sbjct: 1   MDSAFVDRAWDKWVTTGNVGSSGNPLKAAILINYDPTGPSRLLSTIAKQEGIDIYPVDLK 60

Query: 60  HFVNFIKHNKLQTENFIIGSNQYLVTSIHENWFSARCINTLKAAGEGAIVMQTAAYILVA 119
            F++F++   L TE F++GSNQY++TSIHENWF+ARC+NT + AGEGAIVMQTA Y+LVA
Sbjct: 61  QFIDFMRCGNLPTETFVLGSNQYIITSIHENWFAARCLNTSQPAGEGAIVMQTAVYVLVA 120

Query: 120 LYEGSIGPASRAMAAADQLTWQLGRK 145
           LY+GSIG AS+AMAAADQ   QL RK
Sbjct: 121 LYDGSIGSASQAMAAADQFASQLSRK 146


>AT4G19410.2 | Symbols:  | Pectinacetylesterase family protein |
           chr4:10581037-10584766 REVERSE LENGTH=517
          Length = 517

 Score =  211 bits (538), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 97/146 (66%), Positives = 120/146 (82%), Gaps = 1/146 (0%)

Query: 1   MDWGFVHKTWDKWAST-NIGYSGYPLKAALLINYDPTGPSRLLSTVAEQEGMKANPIELS 59
           MD  FV + WDKW +T N+G SG PLKAA+LINYDPTGPSRLLST+A+QEG+   P++L 
Sbjct: 370 MDSAFVDRAWDKWVTTGNVGSSGNPLKAAILINYDPTGPSRLLSTIAKQEGIDIYPVDLK 429

Query: 60  HFVNFIKHNKLQTENFIIGSNQYLVTSIHENWFSARCINTLKAAGEGAIVMQTAAYILVA 119
            F++F++   L TE F++GSNQY++TSIHENWF+ARC+NT + AGEGAIVMQTA Y+LVA
Sbjct: 430 QFIDFMRCGNLPTETFVLGSNQYIITSIHENWFAARCLNTSQPAGEGAIVMQTAVYVLVA 489

Query: 120 LYEGSIGPASRAMAAADQLTWQLGRK 145
           LY+GSIG AS+AMAAADQ   QL RK
Sbjct: 490 LYDGSIGSASQAMAAADQFASQLSRK 515