Miyakogusa Predicted Gene

Lj1g3v3847330.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3847330.1 Non Chatacterized Hit- tr|C6TGU9|C6TGU9_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2 S,75.38,0,FAMILY
NOT NAMED,NULL; TCP,Transcription factor TCP subgroup; seg,NULL;
TCP,Transcription factor, TC,CUFF.31312.1
         (311 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G27010.1 | Symbols: AT-TCP20, PCF1, TCP20, ATTCP20 | TEOSINTE...   261   5e-70
AT1G69690.1 | Symbols:  | TCP family transcription factor  | chr...   143   2e-34
AT1G58100.1 | Symbols:  | TCP family transcription factor  | chr...   141   7e-34
AT3G47620.1 | Symbols: AtTCP14, TCP14 | TEOSINTE BRANCHED, cyclo...   135   3e-32
AT2G45680.1 | Symbols:  | TCP family transcription factor  | chr...   134   8e-32
AT5G51910.2 | Symbols:  | TCP family transcription factor  | chr...   132   4e-31
AT5G51910.1 | Symbols:  | TCP family transcription factor  | chr...   132   4e-31
AT5G41030.1 | Symbols:  | TCP family transcription factor  | chr...   129   2e-30
AT1G35560.1 | Symbols:  | TCP family transcription factor  | chr...   129   2e-30
AT1G72010.1 | Symbols:  | TCP family transcription factor  | chr...   127   7e-30
AT5G23280.1 | Symbols:  | TCP family transcription factor  | chr...   127   1e-29
AT5G08330.1 | Symbols:  | TCP family transcription factor  | chr...   125   3e-29
AT2G37000.1 | Symbols:  | TCP family transcription factor  | chr...   107   1e-23
AT3G45150.1 | Symbols: TCP16 | TCP domain protein 16 | chr3:1653...    87   2e-17
AT1G58100.2 | Symbols:  | TCP family transcription factor  | chr...    81   8e-16
AT3G18550.2 | Symbols: BRC1, TCP18, ATTCP18 | TCP family transcr...    51   1e-06
AT3G18550.1 | Symbols: BRC1, TCP18, ATTCP18 | TCP family transcr...    51   1e-06

>AT3G27010.1 | Symbols: AT-TCP20, PCF1, TCP20, ATTCP20 | TEOSINTE
           BRANCHED 1, cycloidea, PCF (TCP)-domain family protein
           20 | chr3:9957810-9958754 REVERSE LENGTH=314
          Length = 314

 Score =  261 bits (666), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 173/330 (52%), Positives = 207/330 (62%), Gaps = 35/330 (10%)

Query: 1   MDPKGSKQQNQEVVPNFLXXXXXXXXXXXMGEN-----------KPS-EVKDFQIVIA-- 46
           MDPK     N+  VPNFL           + ++           KP+ E+KDFQIV++  
Sbjct: 1   MDPK---NLNRHQVPNFLNPPPPPRNQGLVDDDAASAVVSDENRKPTTEIKDFQIVVSAS 57

Query: 47  -----EKDESKKQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGET 101
                +K +++ QL PKR+SNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGET
Sbjct: 58  DKEPNKKSQNQNQLGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGET 117

Query: 102 IQWLLQQAEPSIIAATGTGTIPASALASAAGNSVSQQGTSLSAGLHQKFDEMGGGGGANS 161
           IQWLLQQAEPSIIAATG+GTIPASALAS+A  S   QG SL+AGL    D  GG   +  
Sbjct: 118 IQWLLQQAEPSIIAATGSGTIPASALASSAATSNHHQGGSLTAGLMISHDLDGGSSSSGR 177

Query: 162 RTSWGMVGGNLGRPHVATATGLWPHVTGFGFQXXXXXXXXXXXXXESSNYLQKIGFPGFD 221
             +WG +GG  G    +  TGLWP+V GFG               E + Y  +IGFPGFD
Sbjct: 178 PLNWG-IGGGEGVSRSSLPTGLWPNVAGFG-----SGVPTTGLMSEGAGY--RIGFPGFD 229

Query: 222 LPGATTNMGPMSFTSILGGGNNQHMPGLELGLSQDGHIGVLNPQALSQIYQQMGQSRVXX 281
            PG    +G MSF SILGG +NQ MPGLELGLSQ+G++GVLNPQ+ +QIYQQMGQ++   
Sbjct: 230 FPG----VGHMSFASILGGNHNQ-MPGLELGLSQEGNVGVLNPQSFTQIYQQMGQAQAQA 284

Query: 282 XXXXXXXXXXXXXXXXXXTPSNDDSQGSGQ 311
                             +   DDSQGSG+
Sbjct: 285 QGRVLHHMHHNHEEHQQESGEKDDSQGSGR 314


>AT1G69690.1 | Symbols:  | TCP family transcription factor  |
           chr1:26216449-26217426 FORWARD LENGTH=325
          Length = 325

 Score =  143 bits (360), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 64/82 (78%), Positives = 73/82 (89%)

Query: 44  VIAEKDESKKQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQ 103
             +E +   K+  PKRTS KDRHTKVEGRGRRIRMPA+CAAR+FQLTRELGHKSDGETI+
Sbjct: 34  TTSEPNSEPKKPPPKRTSTKDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIE 93

Query: 104 WLLQQAEPSIIAATGTGTIPAS 125
           WLLQQAEP++IAATGTGTIPA+
Sbjct: 94  WLLQQAEPAVIAATGTGTIPAN 115


>AT1G58100.1 | Symbols:  | TCP family transcription factor  |
           chr1:21512680-21513885 REVERSE LENGTH=401
          Length = 401

 Score =  141 bits (355), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 75/119 (63%), Positives = 88/119 (73%), Gaps = 15/119 (12%)

Query: 59  RTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATG 118
           + S KDRHTKV+GRGRRIRMPALCAAR+FQLTRELGHKSDGETI+WLLQQAEP+I+AATG
Sbjct: 57  KRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATG 116

Query: 119 TGTIPASALASAAGNSVSQQGTSLSA------------GL-HQKFDEMGGGGGANSRTS 164
           TGTIPA+   S    S+   G++LSA            GL H ++DE GGGG   + TS
Sbjct: 117 TGTIPAN--FSTLSVSLRSSGSTLSAPPSKSVPLYGALGLTHHQYDEQGGGGVFAAHTS 173


>AT3G47620.1 | Symbols: AtTCP14, TCP14 | TEOSINTE BRANCHED,
           cycloidea and PCF (TCP) 14 | chr3:17559004-17560473
           FORWARD LENGTH=489
          Length = 489

 Score =  135 bits (341), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 61/68 (89%), Positives = 66/68 (97%)

Query: 58  KRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAAT 117
           KR S KDRHTKV+GRGRRIRMPALCAAR+FQLTRELGHKSDGETI+WLLQQAEPS+IAAT
Sbjct: 113 KRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAAT 172

Query: 118 GTGTIPAS 125
           GTGTIPA+
Sbjct: 173 GTGTIPAN 180


>AT2G45680.1 | Symbols:  | TCP family transcription factor  |
           chr2:18820717-18821787 REVERSE LENGTH=356
          Length = 356

 Score =  134 bits (337), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 60/71 (84%), Positives = 66/71 (92%)

Query: 58  KRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAAT 117
           KR S KDRHTKVEGRGRRIRMPA CAARIFQLTRELGHKSDGETI+WLL+ AEP+IIAAT
Sbjct: 71  KRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLENAEPAIIAAT 130

Query: 118 GTGTIPASALA 128
           GTGT+PA A++
Sbjct: 131 GTGTVPAIAMS 141


>AT5G51910.2 | Symbols:  | TCP family transcription factor  |
           chr5:21094704-21095585 REVERSE LENGTH=293
          Length = 293

 Score =  132 bits (331), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 60/77 (77%), Positives = 71/77 (92%)

Query: 52  KKQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEP 111
           K + APKR ++KDRHTKVEGRGRRIRMPA CAAR+FQLTRELGHKSDGETI+WLL++AEP
Sbjct: 47  KTKPAPKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEP 106

Query: 112 SIIAATGTGTIPASALA 128
           +II ATGTGT+PA A++
Sbjct: 107 AIIEATGTGTVPAIAVS 123


>AT5G51910.1 | Symbols:  | TCP family transcription factor  |
           chr5:21094704-21095585 REVERSE LENGTH=293
          Length = 293

 Score =  132 bits (331), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 60/77 (77%), Positives = 71/77 (92%)

Query: 52  KKQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEP 111
           K + APKR ++KDRHTKVEGRGRRIRMPA CAAR+FQLTRELGHKSDGETI+WLL++AEP
Sbjct: 47  KTKPAPKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEP 106

Query: 112 SIIAATGTGTIPASALA 128
           +II ATGTGT+PA A++
Sbjct: 107 AIIEATGTGTVPAIAVS 123


>AT5G41030.1 | Symbols:  | TCP family transcription factor  |
           chr5:16428706-16429437 FORWARD LENGTH=243
          Length = 243

 Score =  129 bits (325), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/292 (38%), Positives = 143/292 (48%), Gaps = 86/292 (29%)

Query: 1   MDPKGSKQQNQEVVPNFLXXXXXXXXXXXMGENKPSEVKDFQIVIAEKDESKKQL----- 55
           M+PK  K QN   +P+FL             + K +EVK F IV+ EK + K+       
Sbjct: 3   MEPK--KNQN---LPSFLNPSRQNQDNDK--KRKQTEVKGFDIVVGEKRKKKENEEEDQE 55

Query: 56  ------APKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQA 109
                   K+  NKDRH KVEGRGRR+R+P LCAARI+QLT+ELGHKSDGET++WLLQ A
Sbjct: 56  IQILYEKEKKKPNKDRHLKVEGRGRRVRLPPLCAARIYQLTKELGHKSDGETLEWLLQHA 115

Query: 110 EPSIIAATGTGTIPASALASAAGNSVSQQGTSLSAGLHQKFDEMGGGGGANSRTSWGMVG 169
           EPSI++AT  G  P  ++       VSQ   +    +    +E        SRT      
Sbjct: 116 EPSILSATVNGIKPTESV-------VSQPPLTADLMICHSVEEA-------SRTQ----- 156

Query: 170 GNLGRPHVATATGLWPHVTGFGFQXXXXXXXXXXXXXESSNYLQKIGFPGFDLPGATTNM 229
                     A GLW + TG                       Q IG  GFDL     N 
Sbjct: 157 --------MEANGLWRNETG-----------------------QTIG--GFDL-----NY 178

Query: 230 GP-MSFTSI--LGGGNNQHMPGLELGLSQDGHIGVLNPQALSQIYQQMGQSR 278
           G    F  +  +G G+NQ  PGLEL LSQ   +GVLNP    Q++QQMG+ +
Sbjct: 179 GIGFDFNGVPEIGFGDNQ-TPGLELRLSQ---VGVLNP----QVFQQMGKEQ 222


>AT1G35560.1 | Symbols:  | TCP family transcription factor  |
           chr1:13116099-13117124 REVERSE LENGTH=341
          Length = 341

 Score =  129 bits (325), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/93 (70%), Positives = 76/93 (81%), Gaps = 3/93 (3%)

Query: 58  KRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAAT 117
           KR S KDRH KV+GRGRRIRMPA+CAAR+FQLTREL HKSDGETI+WLLQQAEP+IIAAT
Sbjct: 52  KRPS-KDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIEWLLQQAEPAIIAAT 110

Query: 118 GTGTIPASALASAAGNSVSQQGTSLSAGLHQKF 150
           GTGTIPA+   S    S+   G++LSA L + F
Sbjct: 111 GTGTIPAN--ISTLNISLRSSGSTLSAPLSKSF 141


>AT1G72010.1 | Symbols:  | TCP family transcription factor  |
           chr1:27107844-27108971 FORWARD LENGTH=375
          Length = 375

 Score =  127 bits (320), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 56/63 (88%), Positives = 63/63 (100%)

Query: 63  KDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTI 122
           KDRHTKV+GRGRRIRMPA+CAAR+FQLTRELGHKSDGETI+WLLQQAEP+IIA+TGTGTI
Sbjct: 64  KDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIASTGTGTI 123

Query: 123 PAS 125
           PA+
Sbjct: 124 PAN 126


>AT5G23280.1 | Symbols:  | TCP family transcription factor  |
           chr5:7843017-7843769 FORWARD LENGTH=250
          Length = 250

 Score =  127 bits (318), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 66/107 (61%), Positives = 81/107 (75%), Gaps = 4/107 (3%)

Query: 50  ESKKQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQA 109
           E +  +  K+   KDRH+KV+GRGRRIRMP +CAAR+FQLTRELGHKSDG+TI+WLL+QA
Sbjct: 27  EQQPSVVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQA 86

Query: 110 EPSIIAATGTGTIPASALASAAGNSVSQQGTSLSAGLHQKFDEMGGG 156
           EPSIIAATGTGT PAS  ++A   SVS +G + S  L  K   + GG
Sbjct: 87  EPSIIAATGTGTTPAS-FSTA---SVSIRGATNSTSLDHKPTSLLGG 129


>AT5G08330.1 | Symbols:  | TCP family transcription factor  |
           chr5:2680828-2681547 FORWARD LENGTH=239
          Length = 239

 Score =  125 bits (315), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 60/83 (72%), Positives = 72/83 (86%), Gaps = 1/83 (1%)

Query: 44  VIAEKDESKKQL-APKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETI 102
           +I E+  +K  L A K+  +KDRH+KV+GRGRRIRMP +CAAR+FQLTRELGHKSDG+TI
Sbjct: 12  IIVEQTSNKGPLNAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTI 71

Query: 103 QWLLQQAEPSIIAATGTGTIPAS 125
           +WLL+QAEPSIIAATGTGT PAS
Sbjct: 72  EWLLRQAEPSIIAATGTGTTPAS 94


>AT2G37000.1 | Symbols:  | TCP family transcription factor  |
           chr2:15540390-15540956 FORWARD LENGTH=188
          Length = 188

 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 49/59 (83%), Positives = 53/59 (89%)

Query: 63  KDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGT 121
           KDRHTKV GR RR+ MPAL AARIFQLTRELGHK++GETI+WLL QAEPSIIAATG GT
Sbjct: 44  KDRHTKVNGRSRRVTMPALAAARIFQLTRELGHKTEGETIEWLLSQAEPSIIAATGYGT 102


>AT3G45150.1 | Symbols: TCP16 | TCP domain protein 16 |
           chr3:16531179-16531676 FORWARD LENGTH=165
          Length = 165

 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 49/67 (73%)

Query: 59  RTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATG 118
           R + KDRH K+ GR RRIR+P   A ++F+LT+ELG K+DGET+ WLLQ AEP+I AATG
Sbjct: 14  RRTPKDRHLKIGGRDRRIRIPPSVAPQLFRLTKELGFKTDGETVSWLLQNAEPAIFAATG 73

Query: 119 TGTIPAS 125
            G    S
Sbjct: 74  HGVTTTS 80


>AT1G58100.2 | Symbols:  | TCP family transcription factor  |
           chr1:21512680-21513885 REVERSE LENGTH=377
          Length = 377

 Score = 81.3 bits (199), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 64/119 (53%), Gaps = 39/119 (32%)

Query: 59  RTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATG 118
           + S KDRHTKV+GRGRRIRMPALCAAR+FQLTREL                        G
Sbjct: 57  KRSTKDRHTKVDGRGRRIRMPALCAARVFQLTREL------------------------G 92

Query: 119 TGTIPASALASAAGNSVSQQGTSLSA------------GL-HQKFDEMGGGGGANSRTS 164
           TGTIPA+   S    S+   G++LSA            GL H ++DE GGGG   + TS
Sbjct: 93  TGTIPAN--FSTLSVSLRSSGSTLSAPPSKSVPLYGALGLTHHQYDEQGGGGVFAAHTS 149


>AT3G18550.2 | Symbols: BRC1, TCP18, ATTCP18 | TCP family
           transcription factor  | chr3:6383769-6385604 FORWARD
           LENGTH=429
          Length = 429

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 12/95 (12%)

Query: 34  KPSE----VKDFQIVIAEKD-ESKKQLAPKRTSNKDRHTKVEG----RGRRIRMPALCAA 84
           +PSE    ++D Q +   +D + KK   P RT   DRH+K++     R RR+R+    A 
Sbjct: 118 EPSETINLIEDSQRISTSQDPKMKKAKKPSRT---DRHSKIKTAKGTRDRRMRLSLDVAK 174

Query: 85  RIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGT 119
            +F L   LG     +T++WLL QA+P II    T
Sbjct: 175 ELFGLQDMLGFDKASKTVEWLLTQAKPEIIKIATT 209


>AT3G18550.1 | Symbols: BRC1, TCP18, ATTCP18 | TCP family
           transcription factor  | chr3:6383769-6385604 FORWARD
           LENGTH=433
          Length = 433

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 12/95 (12%)

Query: 34  KPSE----VKDFQIVIAEKD-ESKKQLAPKRTSNKDRHTKVEG----RGRRIRMPALCAA 84
           +PSE    ++D Q +   +D + KK   P RT   DRH+K++     R RR+R+    A 
Sbjct: 118 EPSETINLIEDSQRISTSQDPKMKKAKKPSRT---DRHSKIKTAKGTRDRRMRLSLDVAK 174

Query: 85  RIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGT 119
            +F L   LG     +T++WLL QA+P II    T
Sbjct: 175 ELFGLQDMLGFDKASKTVEWLLTQAKPEIIKIATT 209