Miyakogusa Predicted Gene
- Lj1g3v3835810.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3835810.1 Non Chatacterized Hit- tr|I3S3Z9|I3S3Z9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,37.5,2e-17,FBD,FBD; domain in FBox and BRCT domain containing
pl,FBD,CUFF.31274.1
(191 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G22730.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 49 2e-06
AT5G56820.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 47 9e-06
>AT5G22730.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:7551632-7553219
REVERSE LENGTH=466
Length = 466
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 53 YFNEFLCKFADIPIFPNLIHMELTLGGRIKMESLLYFLN-------HCPRLQNLVMENLF 105
+F EFL + D P ++ R+K E LYFL CP L++LVM F
Sbjct: 325 HFVEFLYYYKDFDPLPQFCNL-----SRLKAEISLYFLEILPTILESCPNLKSLVMVLEF 379
Query: 106 SIDSRNWPNTLVA-SECFSSQLRTCFLPCFTGTDSELRFSKFVMQNSTLLGSMKIIGHSL 164
+ + P + C S L + + F G +++ +++ ++NS +L + +
Sbjct: 380 YLQEEDEPIIFSSVPRCLVSSLESVEIKKFNGRPAKMEVARYFLENSGVLQKLVLHLRCS 439
Query: 165 SHEKKAKMRIELDSCPRSSANCQLL 189
+HE + +L + PR S+ C+++
Sbjct: 440 THEDGFYILKDLLALPRGSSTCRIV 464
>AT5G56820.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22976334-22977838
FORWARD LENGTH=435
Length = 435
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 11/136 (8%)
Query: 66 IFPNLIHMELTLGGRIKMESLLYFLNHCPRLQNLVMENLFSIDSRNWPNTLV-----ASE 120
IF L+++EL L R+ + +L L H P LQ L + ++ PN V E
Sbjct: 290 IFHQLLYLELHLHKRLNGDRILSLLKHSPNLQTLKLNEKPLRSIKDQPNISVRKPNSVPE 349
Query: 121 CFSSQLRTCFLPCFTGTDSELRFSKFVMQNSTLLGSMKIIGH----SLSHEKKAKMRI-- 174
C + L T + G + + +++ N+ L + I + H +K ++I
Sbjct: 350 CLTFHLETLEWQGYAGRPEDKEIAVYILGNALRLNTATISRYFSSSRFRHHQKKDLKIVE 409
Query: 175 ELDSCPRSSANCQLLF 190
EL S ++S +CQL+
Sbjct: 410 ELKSITKASTSCQLVL 425