Miyakogusa Predicted Gene

Lj1g3v3835550.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3835550.1 tr|G5AVB1|G5AVB1_HETGA Zinc finger protein 511
OS=Heterocephalus glaber GN=GW7_07881 PE=4 SV=1,34.4,5e-19,SUBFAMILY
NOT NAMED,NULL; UNCHARACTERIZED,NULL; zf-C2H2_4,NULL;
ZINC_FINGER_C2H2_1,Zinc finger,
C2H2,NODE_21827_length_1175_cov_67.757446.path2.1
         (242 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G14140.1 | Symbols:  | zinc ion binding;nucleic acid binding;...   305   1e-83

>AT5G14140.1 | Symbols:  | zinc ion binding;nucleic acid
           binding;zinc ion binding | chr5:4561539-4563513 FORWARD
           LENGTH=264
          Length = 264

 Score =  305 bits (782), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 152/243 (62%), Positives = 190/243 (78%), Gaps = 11/243 (4%)

Query: 10  ESGFPFWKPLPRMFPPDSPFFAPGNLERELLAKQVALEFPEEKLE-LENWIQEEAREVFC 68
           E GFP+W P+ R FPPDSPFFA GN+ERELLAKQV L+F E+++  L  +++ E R + C
Sbjct: 12  ELGFPYWNPIRRRFPPDSPFFASGNVERELLAKQVTLDFTEDEINHLHKFVEIETRRISC 71

Query: 69  PIVGCRARLKSLEDFENHYSARHHSACCSVCSRVYPTSRLLSIHVSEEHDSFFKAKVARG 128
           PIVGC  RLKSL+ FE+HY+ARH +A CSVCSRVYPTSRLLSIH+SE HDSFF+AKV+RG
Sbjct: 72  PIVGCPERLKSLDHFEDHYNARH-TASCSVCSRVYPTSRLLSIHISEAHDSFFQAKVSRG 130

Query: 129 YDVYECLVEGCGLKFKSYTSRKQHLVDKHGFPKSFQFFKKAAPSKKERLKTQHKQAA--- 185
           YD+YECLVEGCGLKFK+Y +R +HL+DKH FP +F+FFKK   SKK R K Q +  +   
Sbjct: 131 YDMYECLVEGCGLKFKTYKARHRHLIDKHKFPTTFEFFKKTQLSKKRREKLQRQHVSKLK 190

Query: 186 HKED----ASGMMEVEN-AAMDDLVSAVSRLNTSDSTPSSISFGRR-PKGLSFVPRSVQR 239
           H+ED    +S  MEVE+  ++D LVSA+S L TSD+TPS++SFGRR  +GL+FVPRSV R
Sbjct: 191 HEEDKEAASSDAMEVEDKGSLDGLVSALSSLTTSDTTPSNVSFGRRHGRGLTFVPRSVHR 250

Query: 240 GNR 242
             R
Sbjct: 251 EKR 253