Miyakogusa Predicted Gene

Lj1g3v3835530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3835530.1 Non Chatacterized Hit- tr|G7I7Y7|G7I7Y7_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,50.49,0.000000000000001,seg,NULL,
NODE_53141_length_942_cov_44.290871.path2.1
         (182 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G27050.1 | Symbols:  | unknown protein; Has 43 Blast hits to ...   214   2e-56

>AT3G27050.1 | Symbols:  | unknown protein; Has 43 Blast hits to 43
           proteins in 17 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other
           Eukaryotes - 3 (source: NCBI BLink). |
           chr3:9978286-9979636 REVERSE LENGTH=182
          Length = 182

 Score =  214 bits (546), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 112/182 (61%), Positives = 140/182 (76%)

Query: 1   MAADTQSGGMLSREQLLHLFERFSFLTSQPDVKKRISDAVQDNQEAVAVTTAIQEEIFLE 60
           MA+  QS GML++EQ+++LF+RF +LTSQ DVKKRISDAV D QEAVAVTTAIQEEIFLE
Sbjct: 1   MASSLQSSGMLTKEQMVYLFDRFDYLTSQSDVKKRISDAVDDKQEAVAVTTAIQEEIFLE 60

Query: 61  MGVDPSFGISCLGKISTEYENDRDLVIQFYKFLAKXXXXXXXXXXXXXXXXXKMRYQQKL 120
           MG+DP FGI CLGK+++ YEND++L+I FYKFLAK                 KM+  Q+L
Sbjct: 61  MGIDPGFGIGCLGKLNSAYENDKELMIGFYKFLAKEEMACEEAELGQDGFEQKMKALQQL 120

Query: 121 QDQQLEMLKHMRKFHLDDQSAILEKLHQQMENDNYESEAACLSSEQIEEIVPRKVSPLFM 180
           Q+QQLEMLK+MRKF LDDQSAIL+KL +Q+EN  +E EA+ LS E++EE   R+VSP+F 
Sbjct: 121 QEQQLEMLKYMRKFSLDDQSAILQKLQKQLENAGFEPEASLLSGEEMEEAGRRRVSPVFG 180

Query: 181 PR 182
            R
Sbjct: 181 SR 182