Miyakogusa Predicted Gene
- Lj1g3v3834400.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3834400.1 Non Chatacterized Hit- tr|I1MLI6|I1MLI6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,86.05,0,no
description,Chloride channel, core; CLCHANNEL,Chloride channel,
voltage gated;
CLCHANNELPLT,Chlor,NODE_28936_length_1641_cov_208.331512.path2.1
(510 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G40890.1 | Symbols: ATCLC-A, CLC-A, CLCA, ATCLCA | chloride c... 748 0.0
AT3G27170.1 | Symbols: CLC-B, ATCLC-B | chloride channel B | chr... 746 0.0
AT5G40890.2 | Symbols: ATCLC-A, CLC-A, CLCA, ATCLCA | chloride c... 575 e-164
AT5G33280.1 | Symbols: | Voltage-gated chloride channel family ... 523 e-148
AT5G49890.1 | Symbols: CLC-C, ATCLC-C | chloride channel C | chr... 510 e-144
AT5G26240.1 | Symbols: CLC-D, ATCLC-D | chloride channel D | chr... 342 3e-94
>AT5G40890.1 | Symbols: ATCLC-A, CLC-A, CLCA, ATCLCA | chloride
channel A | chr5:16381645-16384999 REVERSE LENGTH=775
Length = 775
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/486 (75%), Positives = 404/486 (83%), Gaps = 4/486 (0%)
Query: 25 DPEGNPLNQPLLIKRNRTLSSNPLALVGAKVSYIESLDYEINENDLFKHNWRSRSRVEVL 84
DPE N LNQPLL KR+RTLSS PLALVGAKVS+IESLDYEINENDLFKH+WRSRS+ +V
Sbjct: 22 DPENNTLNQPLL-KRHRTLSSTPLALVGAKVSHIESLDYEINENDLFKHDWRSRSKAQVF 80
Query: 85 QYIFLKWTLALLVGLLTGIMATLINLAVENIAGYKLLAVLRYIHTERYLAGFLYFTGVNL 144
QYIFLKWTLA LVGL TG++ATLINLAVENIAGYKLLAV YI +R+ G + FTG NL
Sbjct: 81 QYIFLKWTLACLVGLFTGLIATLINLAVENIAGYKLLAVGYYIAQDRFWTGLMVFTGANL 140
Query: 145 FLTLIAAVLCVCFAPTAAGPGIPEIKAYLNGIDTPNMFGATTLIVKIIGSIGAVAAGLDL 204
LTL+A VL V FAPTAAGPGIPEIKAYLNGIDTPNMFG TT++VKI+GSIGAVAAGLDL
Sbjct: 141 GLTLVATVLVVYFAPTAAGPGIPEIKAYLNGIDTPNMFGFTTMMVKIVGSIGAVAAGLDL 200
Query: 205 GKEGPLVHIGSCIASLLGQGGPDNYKIKWRWLRYFNNDRDRRDLITCGASAGVCAAFRAP 264
GKEGPLVHIGSCIASLLGQGGPDN++IKWRWLRYFNNDRDRRDLITCG+++GVCAAFR+P
Sbjct: 201 GKEGPLVHIGSCIASLLGQGGPDNHRIKWRWLRYFNNDRDRRDLITCGSASGVCAAFRSP 260
Query: 265 VGGVLFALEEVATWWRSALLWRTFFCTAVVVVVLRAFIEICNSGKCGLFGSGGLIMFDVS 324
VGGVLFALEEVATWWRSALLWRTFF TAVVVVVLRAFIEICNSGKCGLFGSGGLIMFDVS
Sbjct: 261 VGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFIEICNSGKCGLFGSGGLIMFDVS 320
Query: 325 NVTVRYHPXXXXXXXXXXXXXXXXXSLYNHLLHKILRLYNLINQKGRMHKLLLSLAVALF 384
+V VRYH SLYNHLLHK+LRLYNLINQKG++HK+LLSL V+LF
Sbjct: 321 HVEVRYHAADIIPVTLIGVFGGILGSLYNHLLHKVLRLYNLINQKGKIHKVLLSLGVSLF 380
Query: 385 TSVCQYGLPFLAKCTPCGSLPPDSESVCPTNGRSGNFKQFNCPPGHYXXXXXXXXXXXXX 444
TSVC +GLPFLA+C PC P + +CPTNGRSGNFKQFNCP G+Y
Sbjct: 381 TSVCLFGLPFLAECKPC---DPSIDEICPTNGRSGNFKQFNCPNGYYNDLSTLLLTTNDD 437
Query: 445 XVRNIFSTNTSQEYQPFSLLIFFALYCILGLFTFGIAVPSGLFLPIILMGSGYGRLIGIF 504
VRNIFS+NT E+ SL IFF LYCILGL TFGIA PSGLFLPIILMGS YGR++G
Sbjct: 438 AVRNIFSSNTPNEFGMVSLWIFFGLYCILGLITFGIATPSGLFLPIILMGSAYGRMLGTA 497
Query: 505 MEPYTK 510
M YT
Sbjct: 498 MGSYTN 503
>AT3G27170.1 | Symbols: CLC-B, ATCLC-B | chloride channel B |
chr3:10024147-10026921 FORWARD LENGTH=780
Length = 780
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/486 (74%), Positives = 403/486 (82%), Gaps = 4/486 (0%)
Query: 25 DPEGNPLNQPLLIKRNRTLSSNPLALVGAKVSYIESLDYEINENDLFKHNWRSRSRVEVL 84
DPE N LNQPL +K NRTLSS PLALVGAKVS+IESLDYEINENDLFKH+WR RS+ +VL
Sbjct: 21 DPESNTLNQPL-VKANRTLSSTPLALVGAKVSHIESLDYEINENDLFKHDWRKRSKAQVL 79
Query: 85 QYIFLKWTLALLVGLLTGIMATLINLAVENIAGYKLLAVLRYIHTERYLAGFLYFTGVNL 144
QY+FLKWTLA LVGL TG++ATLINLAVENIAGYKLLAV ++ ERY+ G + G NL
Sbjct: 80 QYVFLKWTLACLVGLFTGLIATLINLAVENIAGYKLLAVGHFLTQERYVTGLMVLVGANL 139
Query: 145 FLTLIAAVLCVCFAPTAAGPGIPEIKAYLNGIDTPNMFGATTLIVKIIGSIGAVAAGLDL 204
LTL+A+VLCVCFAPTAAGPGIPEIKAYLNG+DTPNMFGATT+IVKI+GSIGAVAAGLDL
Sbjct: 140 GLTLVASVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTMIVKIVGSIGAVAAGLDL 199
Query: 205 GKEGPLVHIGSCIASLLGQGGPDNYKIKWRWLRYFNNDRDRRDLITCGASAGVCAAFRAP 264
GKEGPLVHIGSCIASLLGQGG DN++IKWRWLRYFNNDRDRRDLITCG++AGVCAAFR+P
Sbjct: 200 GKEGPLVHIGSCIASLLGQGGTDNHRIKWRWLRYFNNDRDRRDLITCGSAAGVCAAFRSP 259
Query: 265 VGGVLFALEEVATWWRSALLWRTFFCTAVVVVVLRAFIEICNSGKCGLFGSGGLIMFDVS 324
VGGVLFALEEVATWWRSALLWRTFF TAVVVVVLR FIEICNSGKCGLFG GGLIMFDVS
Sbjct: 260 VGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLREFIEICNSGKCGLFGKGGLIMFDVS 319
Query: 325 NVTVRYHPXXXXXXXXXXXXXXXXXSLYNHLLHKILRLYNLINQKGRMHKLLLSLAVALF 384
+VT YH SLYNHLLHK+LRLYNLIN+KG++HK+LLSL V+LF
Sbjct: 320 HVTYTYHVTDIIPVMLIGVIGGILGSLYNHLLHKVLRLYNLINEKGKIHKVLLSLTVSLF 379
Query: 385 TSVCQYGLPFLAKCTPCGSLPPDSESVCPTNGRSGNFKQFNCPPGHYXXXXXXXXXXXXX 444
TSVC YGLPFLAKC PC P + +CPTNGRSGNFKQF+CP G+Y
Sbjct: 380 TSVCLYGLPFLAKCKPC---DPSIDEICPTNGRSGNFKQFHCPKGYYNDLATLLLTTNDD 436
Query: 445 XVRNIFSTNTSQEYQPFSLLIFFALYCILGLFTFGIAVPSGLFLPIILMGSGYGRLIGIF 504
VRN+FS+NT E+ SL IFF LYCILGLFTFGIA PSGLFLPIILMG+ YGR++G
Sbjct: 437 AVRNLFSSNTPNEFGMGSLWIFFVLYCILGLFTFGIATPSGLFLPIILMGAAYGRMLGAA 496
Query: 505 MEPYTK 510
M YT
Sbjct: 497 MGSYTS 502
>AT5G40890.2 | Symbols: ATCLC-A, CLC-A, CLCA, ATCLCA | chloride
channel A | chr5:16381645-16383821 REVERSE LENGTH=643
Length = 643
Score = 575 bits (1483), Expect = e-164, Method: Compositional matrix adjust.
Identities = 281/374 (75%), Positives = 307/374 (82%), Gaps = 3/374 (0%)
Query: 137 LYFTGVNLFLTLIAAVLCVCFAPTAAGPGIPEIKAYLNGIDTPNMFGATTLIVKIIGSIG 196
+ FTG NL LTL+A VL V FAPTAAGPGIPEIKAYLNGIDTPNMFG TT++VKI+GSIG
Sbjct: 1 MVFTGANLGLTLVATVLVVYFAPTAAGPGIPEIKAYLNGIDTPNMFGFTTMMVKIVGSIG 60
Query: 197 AVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNYKIKWRWLRYFNNDRDRRDLITCGASAG 256
AVAAGLDLGKEGPLVHIGSCIASLLGQGGPDN++IKWRWLRYFNNDRDRRDLITCG+++G
Sbjct: 61 AVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWRWLRYFNNDRDRRDLITCGSASG 120
Query: 257 VCAAFRAPVGGVLFALEEVATWWRSALLWRTFFCTAVVVVVLRAFIEICNSGKCGLFGSG 316
VCAAFR+PVGGVLFALEEVATWWRSALLWRTFF TAVVVVVLRAFIEICNSGKCGLFGSG
Sbjct: 121 VCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFIEICNSGKCGLFGSG 180
Query: 317 GLIMFDVSNVTVRYHPXXXXXXXXXXXXXXXXXSLYNHLLHKILRLYNLINQKGRMHKLL 376
GLIMFDVS+V VRYH SLYNHLLHK+LRLYNLINQKG++HK+L
Sbjct: 181 GLIMFDVSHVEVRYHAADIIPVTLIGVFGGILGSLYNHLLHKVLRLYNLINQKGKIHKVL 240
Query: 377 LSLAVALFTSVCQYGLPFLAKCTPCGSLPPDSESVCPTNGRSGNFKQFNCPPGHYXXXXX 436
LSL V+LFTSVC +GLPFLA+C PC P + +CPTNGRSGNFKQFNCP G+Y
Sbjct: 241 LSLGVSLFTSVCLFGLPFLAECKPCD---PSIDEICPTNGRSGNFKQFNCPNGYYNDLST 297
Query: 437 XXXXXXXXXVRNIFSTNTSQEYQPFSLLIFFALYCILGLFTFGIAVPSGLFLPIILMGSG 496
VRNIFS+NT E+ SL IFF LYCILGL TFGIA PSGLFLPIILMGS
Sbjct: 298 LLLTTNDDAVRNIFSSNTPNEFGMVSLWIFFGLYCILGLITFGIATPSGLFLPIILMGSA 357
Query: 497 YGRLIGIFMEPYTK 510
YGR++G M YT
Sbjct: 358 YGRMLGTAMGSYTN 371
>AT5G33280.1 | Symbols: | Voltage-gated chloride channel family
protein | chr5:12549280-12552305 FORWARD LENGTH=765
Length = 765
Score = 523 bits (1346), Expect = e-148, Method: Compositional matrix adjust.
Identities = 248/467 (53%), Positives = 323/467 (69%), Gaps = 3/467 (0%)
Query: 39 RNRTLSSNPLALVGAKVSYIESLDYEINENDLFKHNWRSRSRVEVLQYIFLKWTLALLVG 98
R T S++ +A+VGA V IESLDYEI END FK +WR RS+VE+ QY+F+KW L +G
Sbjct: 19 RRATNSTSQVAIVGANVCPIESLDYEIAENDFFKQDWRGRSKVEIFQYVFMKWLLCFCIG 78
Query: 99 LLTGIMATLINLAVENIAGYKLLAVLRYIHTERYLAGFLYFTGVNLFLTLIAAVLCVCFA 158
++ ++ NLAVEN+AG K + + R+ GF+ F+ NL LTL A+V+ A
Sbjct: 79 IIVSLIGFANNLAVENLAGVKFVVTSNMMIAGRFAMGFVVFSVTNLILTLFASVITAFVA 138
Query: 159 PTAAGPGIPEIKAYLNGIDTPNMFGATTLIVKIIGSIGAVAAGLDLGKEGPLVHIGSCIA 218
P AAG GIPE+KAYLNG+D P +F TLI+KIIG+I AV+A L +GK GP+VH G+C+A
Sbjct: 139 PAAAGSGIPEVKAYLNGVDAPEIFSLRTLIIKIIGNISAVSASLLIGKAGPMVHTGACVA 198
Query: 219 SLLGQGGPDNYKIKWRWLRYFNNDRDRRDLITCGASAGVCAAFRAPVGGVLFALEEVATW 278
S+LGQGG Y++ WRWLR+F NDRDRRDL+TCGA+AG+ A+FRAPVGGVLFALEE+++W
Sbjct: 199 SILGQGGSKRYRLTWRWLRFFKNDRDRRDLVTCGAAAGIAASFRAPVGGVLFALEEMSSW 258
Query: 279 WRSALLWRTFFCTAVVVVVLRAFIEICNSGKCGLFGSGGLIMFDVSNVTVRYHPXXXXXX 338
WRSALLWR FF TAVV +VLRA I++C SGKCGLFG GGLIMFDV + YH
Sbjct: 259 WRSALLWRIFFSTAVVAIVLRALIDVCLSGKCGLFGKGGLIMFDVYSENASYHLGDVLPV 318
Query: 339 XXXXXXXXXXXSLYNHLLHKILRLYNLINQKGRMHKLLLSLAVALFTSVCQYGLPFLAKC 398
SLYN LL K+LR YN I +KG K+LL+ A+++FTS +GLPFLA C
Sbjct: 319 LLLGVVGGILGSLYNFLLDKVLRAYNYIYEKGVTWKILLACAISIFTSCLLFGLPFLASC 378
Query: 399 TPCGSLPPDSESVCPTNGRSGNFKQFNCPPGHYXXXXXXXXXXXXXXVRNIFSTNTSQEY 458
PC P D+ CPT GRSGNFK++ CPPGHY ++N+FS NT E+
Sbjct: 379 QPC---PVDALEECPTIGRSGNFKKYQCPPGHYNDLASLIFNTNDDAIKNLFSKNTDFEF 435
Query: 459 QPFSLLIFFALYCILGLFTFGIAVPSGLFLPIILMGSGYGRLIGIFM 505
FS+L+FF L +F++GI P+GLF+P+I+ G+ YGR +G+ +
Sbjct: 436 HYFSVLVFFVTCFFLSIFSYGIVAPAGLFVPVIVTGASYGRFVGMLL 482
>AT5G49890.1 | Symbols: CLC-C, ATCLC-C | chloride channel C |
chr5:20288489-20292143 REVERSE LENGTH=779
Length = 779
Score = 510 bits (1313), Expect = e-144, Method: Compositional matrix adjust.
Identities = 264/482 (54%), Positives = 335/482 (69%), Gaps = 7/482 (1%)
Query: 31 LNQPLLIKRNRTLSSNPLALVGAKVSYIESLDYEINENDLFKHNWRSRSRVEVLQYIFLK 90
QPLL RNR +++ +A+VGA IESLDYEI END FK +WRSR ++E+LQY FLK
Sbjct: 37 FRQPLL-ARNRKNTTSQIAIVGANTCPIESLDYEIFENDFFKQDWRSRKKIEILQYTFLK 95
Query: 91 WTLALLVGLLTGIMATLINLAVENIAGYKLLAVLRYIHTERYLAGFLYFTGVNLFLTLIA 150
W LA L+GL TG++ L NL VENIAG+KLL + + E+Y F F G NL L A
Sbjct: 96 WALAFLIGLATGLVGFLNNLGVENIAGFKLLLIGNLMLKEKYFQAFFAFAGCNLILATAA 155
Query: 151 AVLCVCFAPTAAGPGIPEIKAYLNGIDTPNMFGATTLIVKIIGSIGAVAAGLDLGKEGPL 210
A LC AP AAG GIPE+KAYLNGID ++ +TL VKI GSI VAAG +GKEGP+
Sbjct: 156 ASLCAFIAPAAAGSGIPEVKAYLNGIDAYSILAPSTLFVKIFGSIFGVAAGFVVGKEGPM 215
Query: 211 VHIGSCIASLLGQGGPDNYKIKWRWLRYFNNDRDRRDLITCGASAGVCAAFRAPVGGVLF 270
VH G+CIA+LLGQGG Y++ W+WLR+F NDRDRRDLITCGA+AGV AAFRAPVGGVLF
Sbjct: 216 VHTGACIANLLGQGGSKKYRLTWKWLRFFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLF 275
Query: 271 ALEEVATWWRSALLWRTFFCTAVVVVVLRAFIEICNSGKCGLFGSGGLIMFDVSNVTVRY 330
ALEE A+WWR+ALLWRTFF TAVV VVLR+ IE C SG+CGLFG GGLIMFDV++ V Y
Sbjct: 276 ALEEAASWWRNALLWRTFFTTAVVAVVLRSLIEFCRSGRCGLFGKGGLIMFDVNSGPVLY 335
Query: 331 HPXXXXXXXXXXXXXXXXXSLYNHLLHKILRLYNLINQKGRMHKLLLSLAVALFTSVCQY 390
SLYN+L+ K+LR Y++IN+KG K++L +AV++ +S C +
Sbjct: 336 STPDLLAIVFLGVIGGVLGSLYNYLVDKVLRTYSIINEKGPRFKIMLVMAVSILSSCCAF 395
Query: 391 GLPFLAKCTPCGSLPPD-SESVCPTNGRSGNFKQFNCPPGHYXXXXXXXXXXXXXXVRNI 449
GLP+L++CTPC P E CP+ GRS +K F CPP HY +RN+
Sbjct: 396 GLPWLSQCTPC---PIGIEEGKCPSVGRSSIYKSFQCPPNHYNDLSSLLLNTNDDAIRNL 452
Query: 450 FSTNTSQEYQPFSLLIFF-ALYCILGLFTFGIAVPSGLFLPIILMGSGYGRLIGIFMEPY 508
F++ + E+ +L IFF A+YC LG+ T+GIA+PSGLF+P+IL G+ YGRL+G + P
Sbjct: 453 FTSRSENEFHISTLAIFFVAVYC-LGIITYGIAIPSGLFIPVILAGASYGRLVGRLLGPV 511
Query: 509 TK 510
++
Sbjct: 512 SQ 513
>AT5G26240.1 | Symbols: CLC-D, ATCLC-D | chloride channel D |
chr5:9189622-9194347 FORWARD LENGTH=792
Length = 792
Score = 342 bits (878), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 209/456 (45%), Positives = 275/456 (60%), Gaps = 4/456 (0%)
Query: 58 IESLDYEINENDLFKHNWRSRSRVEVLQYIFLKWTLALLVGLLTGIMATLINLAVENIAG 117
+ SLDYE+ EN ++ R ++ V Y+ +KW +LL+G+ TG+ A INL+VEN AG
Sbjct: 44 VNSLDYEVIENYAYREEQAHRGKLYVGYYVAVKWFFSLLIGIGTGLAAVFINLSVENFAG 103
Query: 118 YKLLAVLRYIHTERYLAGFLYFTGVNLFLTLIAAVLCVCFAPTAAGPGIPEIKAYLNGID 177
+K I + Y AGF+ + +NL L +A + FAP AAG GIPEIK YLNGID
Sbjct: 104 WKFALTFAIIQ-KSYFAGFIVYLLINLVLVFSSAYIITQFAPAAAGSGIPEIKGYLNGID 162
Query: 178 TPNMFGATTLIVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNYKIKWRWLR 237
P TLI KI GSIG+V GL LGKEGPLVH G+CIASLLGQGG Y + RW +
Sbjct: 163 IPGTLLFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLNSRWPQ 222
Query: 238 YFNNDRDRRDLITCGASAGVCAAFRAPVGGVLFALEEVATWWRSALLWRTFFCTAVVVVV 297
F +DRDRRDL+TCG +AGV AAFRAPVGGVLFALEEV +WWRS L+WR FF +A+V VV
Sbjct: 223 LFKSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVV 282
Query: 298 LRAFIEICNSGKCGLFGSGGLIMFDVSNVTVRYHPXXXXXXXXXXXXXXXXXSLYNHL-L 356
+R + C SG CG FG GG I++DVS+ Y+ +L+N L L
Sbjct: 283 VRTAMGWCKSGICGHFGGGGFIIWDVSDGQDDYYFKELLPMAVIGVIGGLLGALFNQLTL 342
Query: 357 HKILRLYNLINQKGRMHKLLLSLAVALFTSVCQYGLPFLAKCTPCGSLPPDSESVCPT-N 415
+ N +++KG K++ + ++ TS +GLP L KC+PC PDS CP
Sbjct: 343 YMTSWRRNSLHKKGNRVKIIEACIISCITSAISFGLPLLRKCSPCPESVPDSGIECPRPP 402
Query: 416 GRSGNFKQFNCP-PGHYXXXXXXXXXXXXXXVRNIFSTNTSQEYQPFSLLIFFALYCILG 474
G GN+ F C Y +RN+FS T +E+ SLL F A++ L
Sbjct: 403 GMYGNYVNFFCKTDNEYNDLATIFFNTQDDAIRNLFSAKTMREFSAQSLLTFLAMFYTLA 462
Query: 475 LFTFGIAVPSGLFLPIILMGSGYGRLIGIFMEPYTK 510
+ TFG AVP+G F+P I++GS YGRL+G+F+ + K
Sbjct: 463 VVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVRFYK 498