Miyakogusa Predicted Gene

Lj1g3v3834390.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3834390.1 Non Chatacterized Hit- tr|B9RBJ8|B9RBJ8_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,72.31,0,PUTATIVE UNCHARACTERIZED PROTEIN ORF-LAM33_012  PUTATIVE
UNCHARACTERIZED PROTEIN,NULL; RNA M5U METHY,CUFF.31644.1
         (521 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G27180.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   697   0.0  

>AT3G27180.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr3:10027163-10030062 REVERSE LENGTH=518
          Length = 518

 Score =  697 bits (1799), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/495 (67%), Positives = 393/495 (79%), Gaps = 14/495 (2%)

Query: 5   LISAPPSFPLFTCHXXXXXXXXXXXXRPLPPPPQISXXXXXXXXXXXXXXXCALHCSHFQ 64
           L S    FP+  C              PLPP                    C+L C HFQ
Sbjct: 7   LFSFGGRFPIINCRVSAPASAPFVASVPLPP------------STSSDSLACSLQCPHFQ 54

Query: 65  SCSGCTHEFNLHRPVVLEEATEFFNRYGVEDFTFDTCKLWGWRCRAKLAVRGSSTNPLIG 124
           SCSGCT EFNLHRP V++EA++FF RYGV+DFTFD+C+LWGWRCRAKLAVRGSS N LIG
Sbjct: 55  SCSGCTQEFNLHRPAVVDEASDFFKRYGVDDFTFDSCRLWGWRCRAKLAVRGSSDNALIG 114

Query: 125 LYEEGTHNVIDIPECKAHHPNINATVELLRRGITELDIEPYLEDEGTGDLRYVQMAVTTY 184
           LY+EGTH V+DIPECK+HHPNINA +ELLR GI   D+ P+ ED+GTGDLRYVQMAVTT+
Sbjct: 115 LYQEGTHTVVDIPECKSHHPNINAAIELLREGIKVFDVVPFDEDQGTGDLRYVQMAVTTH 174

Query: 185 NTSLPAPERYKNGKVQVTLVWNSRSEQSPGVDKMNALANFLWKNGGPRSRLHLIHSVWAN 244
           +T+L APERYKNGKVQV+LVWNSR+E+S   DK+ AL+ +LW+ GGP S+ HLIHSVWAN
Sbjct: 175 STNLRAPERYKNGKVQVSLVWNSRNERSHNADKLQALSTYLWRKGGPNSKFHLIHSVWAN 234

Query: 245 FQTSSNNIIFGNRWRHLIGERDFWEHVGGIDVSLAPSSFGQANTRAFDALLRKLQKYVPH 304
           FQTS+NNIIFGNRWRHL+GERDFWEHVGGID+SL PSSFGQANTRAFD+LL KL KYVP 
Sbjct: 235 FQTSTNNIIFGNRWRHLLGERDFWEHVGGIDISLDPSSFGQANTRAFDSLLWKLHKYVPG 294

Query: 305 ESSVADLYAGAGVIGLSLAATRKCRSIKCIEINKESKASFEKTIARLPSTVNSSISWHHA 364
            SSVADLYAGAGVIGLSLA +RKC S+KCIE+NKE++ SFEKTI RLP+++N SISWHHA
Sbjct: 295 GSSVADLYAGAGVIGLSLATSRKCSSVKCIEVNKEARLSFEKTIQRLPNSLNCSISWHHA 354

Query: 365 DASKEPLLWLVGSDVVVIDPPRKGLDVSLIDALKDISSIERKVLSSPERSN-SVQEEKRP 423
           DAS  PL W++GSDVVV+DPPR+GLD SL   L+ + SIE+++ SS + S+ + +EEKRP
Sbjct: 355 DASVNPLSWIIGSDVVVVDPPRRGLDASLRQMLESVPSIEKRMRSSSQSSSLNAKEEKRP 414

Query: 424 WVLRAKEASVHIGSKPALVNDPQSVPKTLIYISCGWESFKEDCKSLLSSKAWHLEKAHGF 483
           W+LRAKE S+  G+K     +  ++P+ LIYISCGWESFKEDCKSLLSS+AW LEKAHGF
Sbjct: 415 WILRAKELSIQAGNKQT-SEENNTLPQRLIYISCGWESFKEDCKSLLSSRAWELEKAHGF 473

Query: 484 NFFPGTQSIEVLAVF 498
           NFFPGT SIEVLAVF
Sbjct: 474 NFFPGTDSIEVLAVF 488