Miyakogusa Predicted Gene
- Lj1g3v3834020.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3834020.1 Non Chatacterized Hit- tr|I3S3Z9|I3S3Z9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,38.14,4e-19,FBD,FBD; no description,NULL; domain in FBox and BRCT
domain containing pl,FBD,CUFF.31205.1
(212 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G56820.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 70 7e-13
AT4G10400.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 69 2e-12
AT4G10400.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 69 2e-12
AT5G56420.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 61 7e-10
AT5G56420.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 61 7e-10
AT4G26350.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 60 9e-10
AT3G49030.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 60 1e-09
AT5G56370.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 59 2e-09
AT5G56370.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 59 2e-09
AT5G62970.1 | Symbols: | Protein with RNI-like/FBD-like domains... 59 3e-09
AT4G26340.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 58 6e-09
AT5G38580.1 | Symbols: | FBD-like domain family protein | chr5:... 57 6e-09
AT5G56325.1 | Symbols: | FBD-like domain family protein | chr5:... 57 8e-09
AT3G26920.2 | Symbols: | FBD / Leucine Rich Repeat domains cont... 54 6e-08
AT1G78750.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 8e-08
AT5G56390.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 53 1e-07
AT5G44850.1 | Symbols: | Protein with RNI-like/FBD-like domains... 52 3e-07
AT3G52670.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 52 4e-07
AT3G26930.1 | Symbols: | Protein with RNI-like/FBD-like domains... 52 4e-07
AT5G11370.1 | Symbols: | FBD / Leucine Rich Repeat domains cont... 51 5e-07
AT3G26920.1 | Symbols: | FBD / Leucine Rich Repeat domains cont... 50 9e-07
AT3G52690.1 | Symbols: | RNI-like superfamily protein | chr3:19... 50 1e-06
AT3G54910.3 | Symbols: | RNI-like superfamily protein | chr3:20... 50 1e-06
AT3G54910.2 | Symbols: | RNI-like superfamily protein | chr3:20... 50 1e-06
AT3G54910.1 | Symbols: | RNI-like superfamily protein | chr3:20... 50 1e-06
AT5G38570.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 1e-06
AT5G56810.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 48 4e-06
AT5G50270.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 48 4e-06
AT1G32375.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 48 4e-06
AT3G52680.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 48 5e-06
AT3G52680.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 48 5e-06
AT5G56440.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 47 7e-06
>AT5G56820.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22976334-22977838
FORWARD LENGTH=435
Length = 435
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 113/264 (42%), Gaps = 59/264 (22%)
Query: 3 VGFPKRQNFMELLYGCPILEDLQV--------------------------------KLIS 30
V + R++F LL CP+LEDL + + +
Sbjct: 168 VKYSCRESFTTLLSACPVLEDLDLFIGRVHYDCLNSFTIWVPSLQRLSICDESYRFRSTT 227
Query: 31 FDPSDPS----------SFEGMVKTLPKLARAHVSSFTYDDIPLEAF-CNVEFLRLDKYC 79
F+ S PS S V+ +P L AHV + ++ L F +VE L+
Sbjct: 228 FEISVPSLKYLKIACQDSCFKFVEDMPNLVEAHVEANQHETKNLLRFLTSVERLK----- 282
Query: 80 DVNVNNLVFPNLIHMELILGRKFKWSSVLDLLSHCPQLQTFVLENLHGRD-RGWPD---- 134
D ++ + +F L+++EL L ++ +L LL H P LQT L R + P+
Sbjct: 283 DPDLTDRIFHQLLYLELHLHKRLNGDRILSLLKHSPNLQTLKLNEKPLRSIKDQPNISVR 342
Query: 135 -SLAVPECFVSRLWKCVFKNFTGLKGEMKFAKIVMRNSTSLRTMTIC---SGPSLFHHQK 190
+VPEC L ++ + G + + A ++ N+ L T TI S HHQK
Sbjct: 343 KPNSVPECLTFHLETLEWQGYAGRPEDKEIAVYILGNALRLNTATISRYFSSSRFRHHQK 402
Query: 191 --LEMITELASCPRSSVTCELLFK 212
L+++ EL S ++S +C+L+ +
Sbjct: 403 KDLKIVEELKSITKASTSCQLVLQ 426
>AT4G10400.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:6446335-6447715
REVERSE LENGTH=409
Length = 409
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 110/253 (43%), Gaps = 47/253 (18%)
Query: 2 GVGFPKRQNFMELLYGCPILEDLQVKLISFDP----------------SDPSSFEGMVKT 45
GV + K+ + LL CP+LEDL V L D S PSS E ++ T
Sbjct: 160 GVRYFKQGSLQRLLCNCPVLEDLVVNLSHHDNMGKLTVIVPSLQRLSLSTPSSREFVIDT 219
Query: 46 LPKLARAHVS------SFTYDDIP--LEAFCNVEFLRLDKYCD--VNVNNLVFPNLI--- 92
L+ V +F +++P EA+ NV F + +V L + +
Sbjct: 220 PSLLSFQLVDRNDNSHTFLIENMPKLREAYINVPFADIKSLIGSITSVKRLAISSEVGYG 279
Query: 93 ------HME-LILGRKFKWSSVLDLLSHCPQLQTFVL-------ENLHGRDRGWPDSLAV 138
H+E L L K+ + ++ L + P L+ +L ENL W V
Sbjct: 280 EGFIFNHLEELTLWNKYSSNLLVWFLKNSPNLRELMLVSETDDHENLGML--SWNQPSIV 337
Query: 139 PECFVSRLWKCVFKNFTGLKGEMKFAKIVMRNSTSLRTMTICSGPSLFHHQKLEMITELA 198
PEC +S L K + + G + A +++N+ LRT TI S LF KLEMITEL
Sbjct: 338 PECMLSSLQKFTWFKYLGRPQDRDIAVYILKNACRLRTATIKSDTRLF--TKLEMITELR 395
Query: 199 SCPRSSVTCELLF 211
++S TCEL F
Sbjct: 396 LSSQASSTCELNF 408
>AT4G10400.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:6446335-6447715
REVERSE LENGTH=409
Length = 409
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 110/253 (43%), Gaps = 47/253 (18%)
Query: 2 GVGFPKRQNFMELLYGCPILEDLQVKLISFDP----------------SDPSSFEGMVKT 45
GV + K+ + LL CP+LEDL V L D S PSS E ++ T
Sbjct: 160 GVRYFKQGSLQRLLCNCPVLEDLVVNLSHHDNMGKLTVIVPSLQRLSLSTPSSREFVIDT 219
Query: 46 LPKLARAHVS------SFTYDDIP--LEAFCNVEFLRLDKYCD--VNVNNLVFPNLI--- 92
L+ V +F +++P EA+ NV F + +V L + +
Sbjct: 220 PSLLSFQLVDRNDNSHTFLIENMPKLREAYINVPFADIKSLIGSITSVKRLAISSEVGYG 279
Query: 93 ------HME-LILGRKFKWSSVLDLLSHCPQLQTFVL-------ENLHGRDRGWPDSLAV 138
H+E L L K+ + ++ L + P L+ +L ENL W V
Sbjct: 280 EGFIFNHLEELTLWNKYSSNLLVWFLKNSPNLRELMLVSETDDHENLGML--SWNQPSIV 337
Query: 139 PECFVSRLWKCVFKNFTGLKGEMKFAKIVMRNSTSLRTMTICSGPSLFHHQKLEMITELA 198
PEC +S L K + + G + A +++N+ LRT TI S LF KLEMITEL
Sbjct: 338 PECMLSSLQKFTWFKYLGRPQDRDIAVYILKNACRLRTATIKSDTRLF--TKLEMITELR 395
Query: 199 SCPRSSVTCELLF 211
++S TCEL F
Sbjct: 396 LSSQASSTCELNF 408
>AT5G56420.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22850863-22852334
REVERSE LENGTH=422
Length = 422
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 87 VFPNLIHMELILGRKFKWSSVLDLLSHCPQLQTFVLENLHGRDRGWPDSL----AVPECF 142
+F L+H+EL W + L+ P+L+ L H R P + A+P+C
Sbjct: 293 IFSQLVHLELCTCAPRWWDLLTRLIEDSPKLRVLKLRQKHIRRAPSPRASWKQPALPKCL 352
Query: 143 VSRLWKCVFKNFTGLKGEMKFAKIVMRNSTSLRTMTICSGPSLFHHQKLEMITELASCPR 202
+ L ++ + G + + + A +++++ L+T I P+ +K EM+ +L+S PR
Sbjct: 353 LFHLETFKWELYEGSQKQKEVATFILKHAIRLKTAIISPKPTSTLLEKHEMLKDLSSSPR 412
Query: 203 SSVTCELLF 211
S TCELLF
Sbjct: 413 GSSTCELLF 421
>AT5G56420.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22850863-22852334
REVERSE LENGTH=422
Length = 422
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 87 VFPNLIHMELILGRKFKWSSVLDLLSHCPQLQTFVLENLHGRDRGWPDSL----AVPECF 142
+F L+H+EL W + L+ P+L+ L H R P + A+P+C
Sbjct: 293 IFSQLVHLELCTCAPRWWDLLTRLIEDSPKLRVLKLRQKHIRRAPSPRASWKQPALPKCL 352
Query: 143 VSRLWKCVFKNFTGLKGEMKFAKIVMRNSTSLRTMTICSGPSLFHHQKLEMITELASCPR 202
+ L ++ + G + + + A +++++ L+T I P+ +K EM+ +L+S PR
Sbjct: 353 LFHLETFKWELYEGSQKQKEVATFILKHAIRLKTAIISPKPTSTLLEKHEMLKDLSSSPR 412
Query: 203 SSVTCELLF 211
S TCELLF
Sbjct: 413 GSSTCELLF 421
>AT4G26350.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:13326853-13328315
FORWARD LENGTH=431
Length = 431
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 8/138 (5%)
Query: 81 VNVNNLVFPNLIHMELILGRKFKWSSVLDLLSHCPQLQTFVLENLHGRD-------RGWP 133
+N +++F L+ + + + W + +L P+L+ L N H R+ W
Sbjct: 291 MNPYDMIFHMLVDLTICTCTQGWWDLLTHMLQGSPKLRFLTLTNDHCRELPSLETPACWK 350
Query: 134 DSLAVPECFVSRLWKCVFKNFTGLKGEMKFAKIVMRNSTSLRTMTICSGPSLFHHQKLEM 193
+VP C +S L + + G +G+ + K V+RN+T L+ S + F +K M
Sbjct: 351 RPSSVPACLLSSLQAFTWSGYKGRQGDKEVVKYVLRNATGLKKRIFISKSNDF-GEKFCM 409
Query: 194 ITELASCPRSSVTCELLF 211
+ ELAS P S +C+LLF
Sbjct: 410 LQELASVPTPSPSCQLLF 427
>AT3G49030.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr3:18173138-18174769
FORWARD LENGTH=443
Length = 443
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 39 FEGM----VKTLPKLARAHVSSFTY--DDIPLEAFCNVEFLRLDKYCDVNV-NNLVFPNL 91
FEG+ ++ P+L A +S ++ ++ LE+ +V+ L L+ + VF L
Sbjct: 253 FEGLDFCLIENAPELVEAEISDVSHIANENILESLTSVKRLSLESPIKIKFPTGKVFDQL 312
Query: 92 IHMELILGRKFKWSSVLDLLSHCPQLQTFVLENLHGRDRG-----WPDSLAVPECFVSRL 146
++++++ + W+ + +L P+LQ L L ++G W VPEC + L
Sbjct: 313 VYLDVLTKEREWWNLLSRMLESSPKLQILKLTGLSCIEKGLDGQNWNPPKCVPECLLFHL 372
Query: 147 WKCVFKNFTGLKG-EMKFAKIVMRNSTSLRTMTICSGPSLFHH--QKLEMITELASCPRS 203
K ++ + +G E + A ++ N+ L+ T + + ++ EM+ ELAS R+
Sbjct: 373 EKFLWTGYEWQRGDEKEVATYILENARLLKKATFSTKRIDLENLEKRREMLNELASVARA 432
Query: 204 SVTCELLF 211
S +C L+F
Sbjct: 433 SDSCHLVF 440
>AT5G56370.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22836200-22837619
REVERSE LENGTH=421
Length = 421
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 22/193 (11%)
Query: 38 SFEGMVKTLPKLARAHVSSFTYDDIPLEAFCNVEFLRLDKYCDVNV-NNLVFPNLIHMEL 96
+E M+ LP++ AHV D L + +V+ L L + + +F L H+E
Sbjct: 231 GYECMIGNLPEIVEAHVEVACSTDDILTSLASVKRLLLCLPTEPELPTGTIFHQLEHLEF 290
Query: 97 ILGRKFKWSSVLDLLSHCPQLQTFVLENLHGRDR--------GWPDSLAVPECFVSRLWK 148
+W ++ +L H P+L++ L HG W + +VPE + L
Sbjct: 291 C-SCCTEWDILMFMLKHSPKLRSLKLNETHGYTIVSQSDPMFHWEEPSSVPETLMFVLET 349
Query: 149 CVFKNFTGLKGEMKFAKIVMRNSTSLRTMTICSGPSLFHHQKLEMIT----------ELA 198
++N+ GLK E + A ++++S L+ T P+ ++E+ T ELA
Sbjct: 350 LEWRNYRGLKMENELASFLLKHSRRLKIATF--SPADCKQVRIELRTTVGMKYRILMELA 407
Query: 199 SCPRSSVTCELLF 211
PR S CEL+F
Sbjct: 408 RLPRGSAECELVF 420
>AT5G56370.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22836200-22837619
REVERSE LENGTH=421
Length = 421
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 22/193 (11%)
Query: 38 SFEGMVKTLPKLARAHVSSFTYDDIPLEAFCNVEFLRLDKYCDVNV-NNLVFPNLIHMEL 96
+E M+ LP++ AHV D L + +V+ L L + + +F L H+E
Sbjct: 231 GYECMIGNLPEIVEAHVEVACSTDDILTSLASVKRLLLCLPTEPELPTGTIFHQLEHLEF 290
Query: 97 ILGRKFKWSSVLDLLSHCPQLQTFVLENLHGRDR--------GWPDSLAVPECFVSRLWK 148
+W ++ +L H P+L++ L HG W + +VPE + L
Sbjct: 291 C-SCCTEWDILMFMLKHSPKLRSLKLNETHGYTIVSQSDPMFHWEEPSSVPETLMFVLET 349
Query: 149 CVFKNFTGLKGEMKFAKIVMRNSTSLRTMTICSGPSLFHHQKLEMIT----------ELA 198
++N+ GLK E + A ++++S L+ T P+ ++E+ T ELA
Sbjct: 350 LEWRNYRGLKMENELASFLLKHSRRLKIATF--SPADCKQVRIELRTTVGMKYRILMELA 407
Query: 199 SCPRSSVTCELLF 211
PR S CEL+F
Sbjct: 408 RLPRGSAECELVF 420
>AT5G62970.1 | Symbols: | Protein with RNI-like/FBD-like domains |
chr5:25272033-25273537 FORWARD LENGTH=449
Length = 449
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 16/189 (8%)
Query: 38 SFEGMVKTLPKLARAHVSSFTYDDIPLEAFCNVEFLRL-------DKYCDVNVNNLVFPN 90
+F G+++ +PKL A++++ LE +V+ L L + + +++VF
Sbjct: 261 TFSGLIENMPKLEEANITARHNFKKLLELVTSVKRLSLNIENNDAEALTAIYGDDIVFNE 320
Query: 91 LIHMELILGRKFKWSSVLD-LLSHCPQLQTFVLENLHGRDRG-------WPDSLAVPECF 142
L H+ + + WS +L LL P+LQ + RD W +VP+C
Sbjct: 321 LEHLNFHIHNAY-WSELLYWLLKASPKLQNLEFDEQCSRDGTMGTLAVFWNQPNSVPQCL 379
Query: 143 VSRLWKCVFKNFTGLKGEMKFAKIVMRNSTSLRTMTICSGPSLFHHQKLEMITELASCPR 202
+S L + + G A ++R S L+ TI G L QKL+M ++ R
Sbjct: 380 LSTLQTFEWSGYPGSVQGKDLATYILRKSRQLKIATISIGYGLDPQQKLKMEMDVKFSFR 439
Query: 203 SSVTCELLF 211
+S TC+ +F
Sbjct: 440 ASPTCKRVF 448
>AT4G26340.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:13324130-13325559
FORWARD LENGTH=419
Length = 419
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 30/189 (15%)
Query: 43 VKTLPKLARAHVSSFTYDDIP-------LEAFCNVEFLRL-----DKYCDVNVNNLVFPN 90
++ +P+L AHV DI L A +V L L + C + ++F
Sbjct: 240 IENMPELVEAHV------DITQGVTHKFLRALTSVRQLSLCLSLSEVMCP---SGIIFSQ 290
Query: 91 LIHMELILGRKFKWSSVLDLLSHCPQLQTFVL------ENLHGRDR--GWPDSLAVPECF 142
L+H+ L K W + +L P+LQ+ L L G + GW +VPEC
Sbjct: 291 LVHLNLSTVVKGWWDLLTSMLQDSPKLQSLKLIDKQHESGLCGIETPIGWKLPSSVPECL 350
Query: 143 VSRLWKCVFKNFTGLKGEMKFAKIVMRNSTSLRTMTICSGPSLFHHQKLEMITELASCPR 202
+ L + + G +G+ + A V++N+ LRT S S +K M+ ELAS P
Sbjct: 351 LFSLEAFEWIGYKGRRGDREVATYVLKNAACLRTAKF-SPESTDVGEKYHMLKELASVPT 409
Query: 203 SSVTCELLF 211
+S + +LLF
Sbjct: 410 ASTSSKLLF 418
>AT5G38580.1 | Symbols: | FBD-like domain family protein |
chr5:15451164-15451842 REVERSE LENGTH=168
Length = 168
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 65 EAFCNV---EFLRLDKYCDVNVNNLVFPNLIHMELILGRKFKWSSVLDLLSHCPQLQTFV 121
EA+ +V + L+ D + D VF L H+ L + ++ + + LL P L+
Sbjct: 11 EAYVDVVSSDILQYDGFDD----GYVFNQLKHLNLCVCKEESSNLLGQLLKDSPNLRILD 66
Query: 122 LENL--HGRDR-----GWPDSLAVPECFVSRLWKCVFKNFTGLKGEMKFAKIVMRNSTSL 174
+ + HG D W VPEC +S L ++ + G + + A +++N+ L
Sbjct: 67 ISVVKDHGTDERNGMVSWNQPNFVPECLLSSLQTLLWSRYFGRQQDRDIAVYILKNACHL 126
Query: 175 RTMTICSGPSLFHHQKLEMITELASCPRSSVTCELLF 211
+T TI + L+MI ELA R+SV C+L+F
Sbjct: 127 KTATILADTDEHDVPNLQMIKELALSLRTSVICQLVF 163
>AT5G56325.1 | Symbols: | FBD-like domain family protein |
chr5:22812213-22813193 FORWARD LENGTH=264
Length = 264
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 5/130 (3%)
Query: 87 VFPNLIHMELILGRKFKWSSVLDLLSHCPQLQTFVLENLH-----GRDRGWPDSLAVPEC 141
+F L+H+ L + ++ LL + P L+ +E +H W + ++PEC
Sbjct: 134 IFNRLVHLRLCTCETEWINLLMRLLRNSPSLRVLEIEQVHYLRYYQPRPCWSEPSSIPEC 193
Query: 142 FVSRLWKCVFKNFTGLKGEMKFAKIVMRNSTSLRTMTICSGPSLFHHQKLEMITELASCP 201
L ++++ G + E + A ++R+S L+ TI S+ H +KLEM EL+ P
Sbjct: 194 LTHNLETFKWEHYYGAEEEKEVAAFILRSSICLKKATIILHRSIVHDEKLEMNKELSLLP 253
Query: 202 RSSVTCELLF 211
S C+L F
Sbjct: 254 ICSPICQLAF 263
>AT3G26920.2 | Symbols: | FBD / Leucine Rich Repeat domains
containing protein | chr3:9921241-9922429 FORWARD
LENGTH=301
Length = 301
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 3 VGFPKRQNFMELLYGCPILEDLQVKLISFDPSDPSSFEGMVKTLPKLARAHVSSFTYDDI 62
V F ++ + LL GC LE+L + + + + +P L R V Y++
Sbjct: 79 VEFVNDESVVNLLAGCISLENLVIH-----QTTDLNVKTFTIAVPSLQRLTVIVEYYEEF 133
Query: 63 -------PLEAFCNVEFLRLD-KYCDVNVNNL-----VFPNLIHMELILGRKFKWSSVLD 109
P + +E RL K V + +L F +L ++EL + W+ +
Sbjct: 134 SVFVVNTPSLKYLKIEVQRLSLKVSLVEIFSLPPISNTFYHLTYLELSTYKPKWWNLLTL 193
Query: 110 LLSHCPQLQTF-VLENLHGRDR----GWPDSLAVPECFVSRLWKCVFKNFTG-LKGEMKF 163
+L P LQ + + + +++ W + VPEC + L V+ + G L+ E++
Sbjct: 194 MLDTSPNLQVLKIFDFMTSQEQRPWEKWNEPKNVPECLLLHLETFVWTCYEGKLENEIEL 253
Query: 164 AKIVMRNSTSLRTMTICSGPSLFHHQKLEMITELASCPRSSVTCELLF 211
AK ++RN+ L+ T S + +++EM+ EL S R+S +C+L+F
Sbjct: 254 AKYILRNARRLKKATF-SIIEINPDKRVEMVGELKSVVRASNSCQLVF 300
>AT1G78750.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:29613122-29614695 REVERSE LENGTH=458
Length = 458
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 102 FKWSSVLDLLSHCPQLQTFVLENLHGRDRGWPDSLAVPECFVSRL-WKCVFKNFTGLKGE 160
+KW + L CP L++ V+ + + R++ + L+VP F+S L + + + G E
Sbjct: 348 YKWEMLPIFLESCPNLKSLVVGSANYREKEGINILSVPRGFLSSLEYVKIERPLKGEAME 407
Query: 161 MKFAKIVMRNSTSLRTMTICSGPSLFHHQKLEMITELASCPRSSVTCELL 210
MK ++ NST L+ +T+C S+ + + ++ EL + PR S C+++
Sbjct: 408 MKLVSYLLENSTILKKLTLCLDDSIKKEESV-ILKELNTIPRLSSACQVV 456
>AT5G56390.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22842790-22844273
REVERSE LENGTH=428
Length = 428
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 87 VFPNLIHMELILGRKFKWSSVL-DLLSHCPQLQTFVLENLHG-RDRG----WPDSLAVPE 140
+F +LIH+ I + +W +VL +L P L+T +E H RD W ++ VPE
Sbjct: 295 IFGSLIHLT-ICTCETEWLNVLIRVLRDSPNLKTLKIEQYHNLRDEDPRPCWNETSLVPE 353
Query: 141 CFVSRLWKCVFKNFTGLKGEMKFAKIVMRNSTSLRTMTICSGPSLFHHQKLEMITELASC 200
+ L + ++ G K E + ++R ++ L+ TI S + H +KLEM+ +
Sbjct: 354 YLLPSLETFEWVDYEGTKTEKQVVAFILRIASCLKQATIVSFKYIDHDKKLEMLNDFPVS 413
Query: 201 PRSSVTCELLF 211
R S C L F
Sbjct: 414 SRRSPACMLAF 424
>AT5G44850.1 | Symbols: | Protein with RNI-like/FBD-like domains |
chr5:18108304-18109593 FORWARD LENGTH=331
Length = 331
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 17/184 (9%)
Query: 42 MVKTLPKLARAHVSSFTYDDIPL-EAFCNVEFLRLDKYCD--VNVNNLVFPNLIHMELIL 98
++K +P L RA++S TY D L + +V FL LD + + + + F L + +I
Sbjct: 152 LIKNMPCLDRAYISVHTYADDKLPRSLSSVLFLELDLADEMLLRCSAINFSRLTEL-IIC 210
Query: 99 GRKFKW-SSVLDLLSHCPQLQTFVL-----ENLHGRDRGWPDSLAVPECFVSRL----WK 148
+ W ++ LL P+L+ + EN W + +VP C S L W
Sbjct: 211 PDESDWLEPLMLLLGKSPKLKKLSVDYGPTENPEDLPLSWNEPSSVPGCLSSHLEIFEW- 269
Query: 149 CVFKNFTGLKGEMKFAKIVMRNSTSLRTMTICSGPSLFHHQKLEMITELASCPRSSVTCE 208
+ + G E+ F ++ NS L+ TI + QK +++ EL S PR S + +
Sbjct: 270 --VEKYGGRVEELGFVTYILANSKCLKRATISLRSAFNLEQKQKVMKELDSIPRVSKSSQ 327
Query: 209 LLFK 212
LL K
Sbjct: 328 LLLK 331
>AT3G52670.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein |
chr3:19525247-19526737 FORWARD LENGTH=384
Length = 384
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 105/255 (41%), Gaps = 48/255 (18%)
Query: 2 GVGFPKRQNFMELLYGCPILEDLQV-----KLISFDPSDPSSFEGMVKTLPKLARAHVSS 56
V + ++ LL CPILE+L V +++FD PS ++ L +
Sbjct: 132 SVSYKDEESIRNLLSSCPILENLVVYEYWYNVVNFDIEVPSL--KRLEICDVLHKKEFRR 189
Query: 57 FTYDDIPLEAFCNVEFLRLDKYCDVNVNNLVFPNLIHMELILGRKF-------------- 102
+T ++P + +E L D +N LV LI+ KF
Sbjct: 190 YTI-NVPCLKYLRIEGLNKDFELCLNAPELVEAYFTKGSLIIADKFLGSLKSAKRLSLDI 248
Query: 103 ----------KWSSVLD-LLSHCPQLQTFVLENLHGRD--------RGWPDSLAVPECFV 143
+W ++L +L P+LQ L + H +D W + VPEC +
Sbjct: 249 LALKMHTRREEWWNLLTVMLDSSPKLQVLKLID-HTQDVSKDNVVSEKWNEPKYVPECLL 307
Query: 144 SRLWKCVFKNFTGLKGEMK-FAKIVMRNSTSLRTMTICSGPSLFHH-QKLE----MITEL 197
S L V+ + + E K A ++RN+ L+ TI + P +KLE M+ EL
Sbjct: 308 SHLETFVWIRYDWEREEEKEVATYILRNARWLKKGTISTNPIESKDLEKLEERRKMLNEL 367
Query: 198 ASCPRSSVTCELLFK 212
S R+S +C L+F+
Sbjct: 368 DSVVRASNSCNLVFE 382
>AT3G26930.1 | Symbols: | Protein with RNI-like/FBD-like domains |
chr3:9925931-9927351 FORWARD LENGTH=409
Length = 409
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Query: 73 LRLDKYCDVNV-NNLVFPNLIHMELILGRKFKWSSVLDLLSHCPQLQTFVL------ENL 125
L++ Y ++ +F L+ +EL + W+ ++ +L P+LQ L EN
Sbjct: 246 LKISSYLEIKFPTGSIFYQLVSLELYTNKAEWWNLLVLMLDSSPKLQVLKLNGKLSGENN 305
Query: 126 HGRDRGWPDSLAVPECFVSRLWKCVFKNFTGL-KGEMKFAKIVMRNSTSLRTMTIC---- 180
H W +P C + L ++K + + E + AK ++RN+ L+ T
Sbjct: 306 HLASMNWDQPKNIPGCLLFNLETFIWKGCKRIGEDEKEVAKYILRNTNRLKRATFTREIY 365
Query: 181 -SGPSLFHHQKLEMITELASCPRSSVTCELLFK 212
S + LEM+ EL S R+S +C+L+F+
Sbjct: 366 EENNSQDMFENLEMVEELESVVRASKSCKLVFE 398
>AT5G11370.1 | Symbols: | FBD / Leucine Rich Repeat domains
containing protein | chr5:3627849-3629717 FORWARD
LENGTH=311
Length = 311
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 17/220 (7%)
Query: 2 GVGFPKRQNFMELLYGCPILEDLQVK------LISFDPSDP-SSFEGMVKTLPKLARAHV 54
GV + + LL C +LE+L V+ + F P SS ++ +PKL A +
Sbjct: 94 GVMYVDEGSLQRLLSNCSLLEELVVERCNGANMRKFAVIIPQSSLSYLIVNMPKLEEADI 153
Query: 55 SSFTYD-DIPLEAFCNVEFLRLDKYCDVNVNNLVFPNLIHMELILGRKFKWSSVLDLLSH 113
+ ++D L++ +V+ RL Y +VN N ++ + I + KF+ S +
Sbjct: 154 ARGSHDVKKLLKSISSVK--RLSLYLEVNNNEDLYGDDIVFNELEHLKFRISRAV----- 206
Query: 114 CPQLQTFVLENLHGRDRGWPDSLAVPECFVSRLWKCVFKNFTGLKGEMKFAKIVMRNSTS 173
P+ V+ + W + VP+C +S L ++ + + E A ++ S
Sbjct: 207 -PRSMANVVGDSMDTLFCWKQMIDVPQCLLSSLQTFKWRTYFPTEEEKGLATYILAKSCR 265
Query: 174 LRTMTICSGPSLFHHQKLEMITE-LASCPRSSVTCELLFK 212
L+T I L ++LEM E L+SC ++ +L+FK
Sbjct: 266 LKTARILIVSKLDPQKELEMKNELLSSCGSTTCNLDLVFK 305
>AT3G26920.1 | Symbols: | FBD / Leucine Rich Repeat domains
containing protein | chr3:9921241-9922429 FORWARD
LENGTH=340
Length = 340
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 104/216 (48%), Gaps = 20/216 (9%)
Query: 9 QNFMELLYGCPILEDLQVKLISFDPSDPSSFEGMVKTLPKLARAHV--SSFTYDDIPLEA 66
+ F + P L+ L+++ I D +++ P+L A + SF + L +
Sbjct: 131 EEFSVFVVNTPSLKYLKIEGIIVDDRT-----CIIENTPELVEASIIDVSFKVFESILGS 185
Query: 67 FCNVEFLRLDKYCDVNVNNL-----VFPNLIHMELILGRKFKWSSVLDLLSHCPQLQTF- 120
+V+ L L K V + +L F +L ++EL + W+ + +L P LQ
Sbjct: 186 LASVQRLSL-KVSLVEIFSLPPISNTFYHLTYLELSTYKPKWWNLLTLMLDTSPNLQVLK 244
Query: 121 VLENLHGRDR----GWPDSLAVPECFVSRLWKCVFKNFTG-LKGEMKFAKIVMRNSTSLR 175
+ + + +++ W + VPEC + L V+ + G L+ E++ AK ++RN+ L+
Sbjct: 245 IFDFMTSQEQRPWEKWNEPKNVPECLLLHLETFVWTCYEGKLENEIELAKYILRNARRLK 304
Query: 176 TMTICSGPSLFHHQKLEMITELASCPRSSVTCELLF 211
T S + +++EM+ EL S R+S +C+L+F
Sbjct: 305 KATF-SIIEINPDKRVEMVGELKSVVRASNSCQLVF 339
>AT3G52690.1 | Symbols: | RNI-like superfamily protein |
chr3:19530736-19531811 FORWARD LENGTH=299
Length = 299
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 114/266 (42%), Gaps = 60/266 (22%)
Query: 3 VGFPKRQNFMELLYGCPILEDLQV--------------------KLISFDPSDPSSF--- 39
V F ++F L+ GCP LEDL + +L+ D + +
Sbjct: 35 VNFKHNESFSNLISGCPNLEDLFMYQYYPLDVVMNFIIVAPSLKRLVIIDYREAGGYVIN 94
Query: 40 ---------EGM-------VKTLPKLARAHVSS--FTYDDIPLEAFCNVEFLRLDKY--- 78
+G+ ++ P L A + + + Y + L + + + L LD
Sbjct: 95 APTLKYLKIKGLSHCGFCLIENAPVLVEAKIRNLFYIYKEKILGSLKSAKRLSLDLSPLE 154
Query: 79 CDVNVNNLVFPNLIHMELILGRKFKWSSVLDLLSHCPQLQTFVL--ENLHGRDRG----- 131
C ++ +F L+H+E+ ++ W+ + +L P+LQ L +NL + G
Sbjct: 155 CPIDS---IFYQLVHLEIYTCKEEWWNLLKLMLDSSPKLQVLKLIGKNLDFKKVGMVGGK 211
Query: 132 WPDSLAVPECFVSRLWKCVFKNFT-GLKGEMKFAKIVMRNSTSLRTMTICSGP-SLFHHQ 189
W + VPEC +S+L V+ ++ + E + A +++N+ L+ ++ + P H
Sbjct: 212 WNEPKNVPECLLSQLKMFVWTSYHWESEVEKEVATYILKNARQLKNVSFSTRPIHSKEHN 271
Query: 190 KLE----MITELASCPRSSVTCELLF 211
KLE M+ EL R+S +C L+F
Sbjct: 272 KLEEKCKMLKELDGVVRASSSCHLVF 297
>AT3G54910.3 | Symbols: | RNI-like superfamily protein |
chr3:20342967-20344277 REVERSE LENGTH=373
Length = 373
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Query: 87 VFPNLIHMELILGRKFKWSSVLDLLSHCPQLQTFVLENLHGRDRG----WPDSLAVPECF 142
VF L H++L + ++ LL LQ L + + W VPEC
Sbjct: 246 VFNQLKHLKLCRCKGHSSDLLVRLLKDSSNLQALDLSEMDYHENHDILYWHQPSTVPECM 305
Query: 143 VSRLWKCVFKNFTGLKGEMKFAKIVMRNSTSLRTMTICSGPSLFHHQKLEMITELASCPR 202
+ L + G E A ++N+ L+T TI S +F ++ +M+ ELA R
Sbjct: 306 LLSLQTLNLSAYRGTPEERDLAVYFLKNAVHLKTTTIKS--CVFDDERFDMLKELALSSR 363
Query: 203 SSVTCELLF 211
+S TC+L+F
Sbjct: 364 ASTTCQLVF 372
>AT3G54910.2 | Symbols: | RNI-like superfamily protein |
chr3:20342967-20344277 REVERSE LENGTH=373
Length = 373
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Query: 87 VFPNLIHMELILGRKFKWSSVLDLLSHCPQLQTFVLENLHGRDRG----WPDSLAVPECF 142
VF L H++L + ++ LL LQ L + + W VPEC
Sbjct: 246 VFNQLKHLKLCRCKGHSSDLLVRLLKDSSNLQALDLSEMDYHENHDILYWHQPSTVPECM 305
Query: 143 VSRLWKCVFKNFTGLKGEMKFAKIVMRNSTSLRTMTICSGPSLFHHQKLEMITELASCPR 202
+ L + G E A ++N+ L+T TI S +F ++ +M+ ELA R
Sbjct: 306 LLSLQTLNLSAYRGTPEERDLAVYFLKNAVHLKTTTIKS--CVFDDERFDMLKELALSSR 363
Query: 203 SSVTCELLF 211
+S TC+L+F
Sbjct: 364 ASTTCQLVF 372
>AT3G54910.1 | Symbols: | RNI-like superfamily protein |
chr3:20342967-20344277 REVERSE LENGTH=373
Length = 373
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Query: 87 VFPNLIHMELILGRKFKWSSVLDLLSHCPQLQTFVLENLHGRDRG----WPDSLAVPECF 142
VF L H++L + ++ LL LQ L + + W VPEC
Sbjct: 246 VFNQLKHLKLCRCKGHSSDLLVRLLKDSSNLQALDLSEMDYHENHDILYWHQPSTVPECM 305
Query: 143 VSRLWKCVFKNFTGLKGEMKFAKIVMRNSTSLRTMTICSGPSLFHHQKLEMITELASCPR 202
+ L + G E A ++N+ L+T TI S +F ++ +M+ ELA R
Sbjct: 306 LLSLQTLNLSAYRGTPEERDLAVYFLKNAVHLKTTTIKS--CVFDDERFDMLKELALSSR 363
Query: 203 SSVTCELLF 211
+S TC+L+F
Sbjct: 364 ASTTCQLVF 372
>AT5G38570.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:15449279-15450601 REVERSE LENGTH=379
Length = 379
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 18/222 (8%)
Query: 3 VGFPKRQNFMELLYGCPILEDLQVKLISF------DPSDPSSFEGMVKTLPKLARAHVSS 56
V P Q+ L+G L ++ S D +DP + +PKL A+V
Sbjct: 159 VIIPSLQSLSLFLFGNSNLNRYKIDTPSLKYLKLEDWNDPEHYSWT--NMPKLREAYVDV 216
Query: 57 FTYDDIP--LEAFCNVEFLR---LDKYCDVNVNNLVFPNLIHMELILGRKFKWSSVL-DL 110
+ + + + + +V+ L L+ Y + + +F +L H++L + F S++L L
Sbjct: 217 ESSNHLKTLIGSITSVKHLTICCLEDY--LYGDGFIFNHLEHLKLCMC-PFDSSNLLGQL 273
Query: 111 LSHCPQLQTFVLENLHGRD-RGWPDSLAVPECFVSRLWKCVFKNFTGLKGEMKFAKIVMR 169
L P LQ + + D W +V EC +S L + + G + A +++
Sbjct: 274 LKGSPNLQVLDIFEMKRNDIVCWNQPSSVLECLLSSLKILNWSAYFGRPQDRDIAVYILK 333
Query: 170 NSTSLRTMTICSGPSLFHHQKLEMITELASCPRSSVTCELLF 211
N+ L+T T + + ++L+MI EL PR+S TC+L+F
Sbjct: 334 NACHLKTATFLTDKRINDVRRLKMIKELRLSPRASSTCQLVF 375
>AT5G56810.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22974520-22975992
FORWARD LENGTH=435
Length = 435
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 104/262 (39%), Gaps = 53/262 (20%)
Query: 3 VGFPKRQNFMELLYGCPILEDL------------------------QVKLISFDPSDPSS 38
V F ++F +LL CP+LEDL K ++ +D +
Sbjct: 174 VNFENEESFSKLLSACPVLEDLFLQRLCSVGRFLFSISVPSLQRLTYTKEQAYYSNDEAI 233
Query: 39 FE------------------GMVKTLPKLARAHVS-SFTYDDIPLEAFCNVEFLRLDKYC 79
E ++ +PKL A V + ++ + +VE L LD Y
Sbjct: 234 LEITAPSLKHLNIFDRVGVFSFIEDMPKLVEASVRVKLSKNEKLPKVLTSVEHLSLDLYP 293
Query: 80 DVNV---NNLVFPNLIHMELILGRKFKWSSVLDLLSHCPQLQTFVLE------NLHGRDR 130
+ + + L+H++L + F+ + +L LL P LQ+ L N+ +
Sbjct: 294 SMVFHLDDRFISKQLLHLKLDIYDNFQSNLLLSLLKDLPNLQSLKLNHSHPSYNVEDQPC 353
Query: 131 GWPDSLAVPECFVSRLWKCVFKNFTGLKGEMKFAKIVMRNSTSLRTMTICSGPSLFHHQK 190
+ +VPEC L + + G E+ A V++N+ L+ TI S S
Sbjct: 354 SVSEPSSVPECLSFHLETFQWIGYAGTFEEIAAAVYVLKNARCLKNATI-SLYSRGTENG 412
Query: 191 LEMITELASCPRSSVTCELLFK 212
L MI EL S + S+ C+LL K
Sbjct: 413 LMMIKELESMSKGSIMCQLLVK 434
>AT5G50270.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:20457487-20458873
FORWARD LENGTH=381
Length = 381
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 1 MGVGFPKRQNFMELLYGCPILEDLQVK------LISFDPSDPSSFEGMVKTLPKLARAHV 54
+ V +P + LL C +LEDL V+ + F PS +++T + A
Sbjct: 160 VSVKYPGNEFVKSLLSSCHVLEDLVVEQCINDNVTIFSVKVPSLKSLVLRTSKERAPDGE 219
Query: 55 SSFTYDDIPLE--------AFCNVE----------FLRLDKYCDVNVNNLVFPNLIHMEL 96
S F + LE FC +E L + D+ VF L+H+ L
Sbjct: 220 SGFVVEAPSLEYLDIDQTGGFCVIENGMPNLAEAYVSVLHHHPDMYPIRCVFHRLVHITL 279
Query: 97 ILGRKFKWSSVLD-LLSHCPQLQTFVLENLHGRDRGWPDSL-----AVPECFVSRLWKCV 150
+W ++L LL P+L + LE HG P L +VPEC +S L
Sbjct: 280 CTCDD-EWLNLLACLLKGSPKLISLKLEKHHGHLICSPSPLRDDLSSVPECVLSSLETVE 338
Query: 151 FKNFTGLKGEMKFAKIVMRNSTSLRTMTICSGPSLFHHQKLEMI 194
+ ++ G + E + + ++RN + L+ I S S+ +K EMI
Sbjct: 339 WVDYEGTEAERQLVEFILRNGSCLKKFVI-SPESVNPDKKYEMI 381
>AT1G32375.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:11679230-11680679
FORWARD LENGTH=422
Length = 422
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 106/267 (39%), Gaps = 62/267 (23%)
Query: 1 MGVGFPKRQNFMELLYGCPILEDLQVKLISFDPSDP-----SSFEGMVKTLPKLARAHVS 55
+ + FP + LL CP+LEDL VK +D SS + +V +LA +
Sbjct: 161 VSMKFPGDELIKMLLSNCPVLEDLVVKRCPYDNVTTFTVRVSSLKCLVLHETELASINAD 220
Query: 56 -SFTYDDIPLE---------AFCNVEFLRLDKYCDVNVNNLVFPNLIHMELILGR----- 100
F D LE FC +E + K NV N + +H + ++G
Sbjct: 221 CGFVIDTPSLECLDIEDGRGGFCVIEN-NMTKVVKANVCN----SYVHTQQLMGSISSVK 275
Query: 101 ------------------------------KFKWSSVLD-LLSHCPQLQTFVLENLHGRD 129
+ +W ++L +L P+L+ L H
Sbjct: 276 RLYVCIPSSKDAYPVGSVFHCLVRLTICTCETEWLNLLMCVLRDSPKLRELKLVKNHVYR 335
Query: 130 RG-----WPDSLAVPECFVSRLWKCVFKNFTGLKGEMKFAKIVMRNSTSLRTMTICSGPS 184
W + AVPEC ++ L + + G + E + A ++R+ + L+ +TI S S
Sbjct: 336 SHQPRPCWNEPSAVPECLLTSLETLEWVKYEGTEEEKEVAAFILRSGSCLKKVTI-SSKS 394
Query: 185 LFHHQKLEMITELASCPRSSVTCELLF 211
++K EM+ EL+ R S TC++ F
Sbjct: 395 TDINKKFEMLKELSLLFRRSPTCQIAF 421
>AT3G52680.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19527075-19528838
FORWARD LENGTH=456
Length = 456
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 109/267 (40%), Gaps = 58/267 (21%)
Query: 3 VGFPKRQNFMELLYGCPILEDLQV-------------------KLISFDPSDPSSFEGMV 43
V + + LL GCP LE+L++ +L D +D F G V
Sbjct: 180 VRYKDESSVRNLLSGCPGLEELRLYRGDDSDIKVFTIEVPSLQRLTIHDNNDGPEFWGYV 239
Query: 44 KTLP--------------------KLARAHVSSFTYDDIP--LEAFCNVE--FLRLDKYC 79
P +L A+++ T I L +F +V L L
Sbjct: 240 INAPFLKYLLIEELRCPEFCLNAPELVEANIAEVTSITIEKFLGSFTSVSRLLLNLSPLK 299
Query: 80 DVNVNNLVFPNLIHMELILGRKFKWSSVLDL-LSHCPQLQTFVL----ENLH--GRDRG- 131
+F L+ +E+ R+ +W ++L L L + P+LQ L +N H G G
Sbjct: 300 ITYPTGSMFYQLVSLEMY-TREAEWWNLLTLMLENSPKLQVLKLTDRSQNFHKDGLVSGK 358
Query: 132 WPDSLAVPECFVSRLWKCVFKNFT-GLKGEMKFAKIVMRNSTSLRTMTICSGPSLFHH-- 188
W + VPEC +S+L V++ F G + E + A +++N L+ T + P
Sbjct: 359 WNEPKDVPECLLSQLETFVWRRFDWGREEEKEIATYILKNGRRLKKATFSTNPIESEELN 418
Query: 189 ---QKLEMITELASCPRSSVTCELLFK 212
++ +++ L R+S +C+L+FK
Sbjct: 419 KLKERRKVLNGLDGVVRASNSCQLVFK 445
>AT3G52680.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19527075-19528838
FORWARD LENGTH=456
Length = 456
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 109/267 (40%), Gaps = 58/267 (21%)
Query: 3 VGFPKRQNFMELLYGCPILEDLQV-------------------KLISFDPSDPSSFEGMV 43
V + + LL GCP LE+L++ +L D +D F G V
Sbjct: 180 VRYKDESSVRNLLSGCPGLEELRLYRGDDSDIKVFTIEVPSLQRLTIHDNNDGPEFWGYV 239
Query: 44 KTLP--------------------KLARAHVSSFTYDDIP--LEAFCNVE--FLRLDKYC 79
P +L A+++ T I L +F +V L L
Sbjct: 240 INAPFLKYLLIEELRCPEFCLNAPELVEANIAEVTSITIEKFLGSFTSVSRLLLNLSPLK 299
Query: 80 DVNVNNLVFPNLIHMELILGRKFKWSSVLDL-LSHCPQLQTFVL----ENLH--GRDRG- 131
+F L+ +E+ R+ +W ++L L L + P+LQ L +N H G G
Sbjct: 300 ITYPTGSMFYQLVSLEMY-TREAEWWNLLTLMLENSPKLQVLKLTDRSQNFHKDGLVSGK 358
Query: 132 WPDSLAVPECFVSRLWKCVFKNFT-GLKGEMKFAKIVMRNSTSLRTMTICSGPSLFHH-- 188
W + VPEC +S+L V++ F G + E + A +++N L+ T + P
Sbjct: 359 WNEPKDVPECLLSQLETFVWRRFDWGREEEKEIATYILKNGRRLKKATFSTNPIESEELN 418
Query: 189 ---QKLEMITELASCPRSSVTCELLFK 212
++ +++ L R+S +C+L+FK
Sbjct: 419 KLKERRKVLNGLDGVVRASNSCQLVFK 445
>AT5G56440.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22855742-22857117
REVERSE LENGTH=430
Length = 430
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 100 RKFKWSSVLDLLSHCPQLQTFVLENLHGRDRGWPDSLAVPECFVSRLWKCVFKNFTGLKG 159
R+ K+ +LD L C V W +VP+C +S L + ++ G +
Sbjct: 325 RQAKFYQLLDPLKRCCSSSVDV-------QTQWEQPSSVPKCLISSLETVEWIDYKGREV 377
Query: 160 EMKFAKIVMRNSTSLRTMTICSGPSLFHHQKLEMITELASCPRSSVTCELLF 211
E K ++ NS L+TM I S S ++KL+M+ EL+S R C L F
Sbjct: 378 EKKVVMYLLENSRQLKTMAIRSLKSTNDNEKLKMLQELSSIHRICTKCGLSF 429