Miyakogusa Predicted Gene
- Lj1g3v3833940.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3833940.1 Non Chatacterized Hit- tr|I1L495|I1L495_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,82.86,0,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; no description,Tetratricopeptide-like ,CUFF.31197.1
(534 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 436 e-122
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 378 e-105
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 378 e-105
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 363 e-100
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 356 2e-98
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 352 5e-97
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 349 2e-96
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 344 1e-94
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 337 1e-92
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 337 2e-92
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 1e-91
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 332 4e-91
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 330 1e-90
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 2e-90
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 328 8e-90
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 327 1e-89
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 327 1e-89
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 1e-89
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 326 2e-89
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 323 2e-88
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 322 4e-88
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 1e-87
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 2e-87
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 317 2e-86
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 1e-85
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 2e-85
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 312 3e-85
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 312 4e-85
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 6e-85
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 8e-85
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 311 8e-85
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 310 2e-84
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 308 7e-84
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 307 1e-83
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 5e-83
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 5e-83
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 303 2e-82
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 4e-82
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 301 1e-81
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 4e-81
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 297 1e-80
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 2e-80
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 296 3e-80
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 294 1e-79
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 1e-79
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 293 1e-79
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 290 2e-78
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 289 3e-78
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 4e-78
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 6e-78
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 288 9e-78
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 1e-77
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 3e-77
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 6e-77
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 6e-77
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 284 9e-77
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 2e-76
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 2e-76
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 4e-76
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 1e-75
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 280 2e-75
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 3e-75
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 4e-75
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 277 1e-74
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 2e-74
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 276 3e-74
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 4e-74
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 6e-74
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 6e-74
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 7e-74
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 3e-73
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 1e-72
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 4e-72
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 7e-72
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 1e-71
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 2e-71
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 266 3e-71
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 265 4e-71
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 6e-71
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 265 9e-71
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 4e-70
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 4e-70
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 5e-70
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 5e-70
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 2e-69
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 2e-69
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 2e-69
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 6e-69
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 2e-68
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 2e-68
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 256 3e-68
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 256 4e-68
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 5e-68
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 5e-68
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 255 6e-68
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 253 3e-67
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 3e-67
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 4e-67
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 6e-67
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 251 7e-67
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 7e-67
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 5e-66
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 247 1e-65
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 7e-65
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 9e-65
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 4e-64
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 4e-64
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 5e-64
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 6e-64
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 6e-64
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 1e-63
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 1e-63
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 240 2e-63
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 5e-63
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 5e-63
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 8e-63
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 238 9e-63
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 238 1e-62
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 237 2e-62
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 2e-62
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 5e-62
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 235 6e-62
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 6e-62
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 233 2e-61
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 232 4e-61
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 6e-61
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 9e-60
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 227 2e-59
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 3e-59
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 4e-59
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 5e-59
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 225 5e-59
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 3e-58
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 221 8e-58
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 8e-58
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 3e-57
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 3e-57
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 7e-57
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 218 9e-57
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 5e-56
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 5e-56
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 6e-56
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 214 1e-55
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 214 2e-55
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 4e-55
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 1e-53
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 2e-53
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 6e-53
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 6e-52
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 6e-52
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 199 3e-51
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 7e-51
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 5e-50
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 8e-50
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 9e-50
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 4e-47
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 3e-45
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 5e-45
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 2e-42
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 168 1e-41
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 3e-41
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 8e-32
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 3e-29
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 122 5e-28
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 5e-28
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 122 6e-28
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 8e-27
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 118 1e-26
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 7e-24
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 8e-24
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 3e-23
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 105 7e-23
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 1e-22
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 8e-22
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 9e-21
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 98 2e-20
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 97 3e-20
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 1e-19
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 4e-19
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 92 6e-19
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 92 1e-18
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 89 8e-18
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 4e-17
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 9e-17
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 9e-17
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 85 1e-16
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 85 2e-16
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 4e-16
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 5e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 80 3e-15
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 80 4e-15
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 79 1e-14
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 77 4e-14
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 76 5e-14
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 75 9e-14
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 75 1e-13
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 74 2e-13
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 74 2e-13
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 73 5e-13
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 68 2e-11
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 66 5e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 66 7e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 63 5e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 60 4e-09
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 56 5e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 55 1e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 1e-07
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 55 2e-07
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 50 3e-06
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 49 6e-06
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 436 bits (1122), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/494 (42%), Positives = 316/494 (63%), Gaps = 10/494 (2%)
Query: 22 IEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSF-TYATNVFHMINN 80
+++C ELK+IH ++L + + S + IT+ L C S F YA VF +
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDS---YAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGA 140
PD ++N+MIR ++ D + R+++LY++MLC N TFP L+K C+
Sbjct: 78 PDTFLWNLMIRGFSCSDEPE-----RSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFE 132
Query: 141 SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYL 200
+HAQ+ K G+ +DV+ NSLIN Y G A LFD IP D V+WNS++ GY+
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192
Query: 201 RNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIAS 260
+ G +D AL LFRKM KN ISW ++I+G VQ + KEAL+LFHEMQ V+PD +++A+
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 252
Query: 261 VLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKD 320
LSACAQLGA++ GKW+HSYL + I D V+G L++MY KCG +++A E+F+ + +K
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS 312
Query: 321 TSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFD 380
AWTA+IS +A HG G +A F+EM++ G+KPN +TF +L+AC+++GLVE+G+ F
Sbjct: 313 VQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFY 372
Query: 381 VMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNV 440
M+R Y ++P + HY C+VDLL RA L DE+ I+ MP++P+ +WGALL C++H N+
Sbjct: 373 SMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNI 432
Query: 441 ELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIE 500
ELGE++ LI ++P++ Y++ +I+ ++D A R L+KE+ V K+PGCS I
Sbjct: 433 ELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVA-KVPGCSTIS 491
Query: 501 INGVVQEFSAGGSS 514
+ G EF AG S
Sbjct: 492 LEGTTHEFLAGDRS 505
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/527 (35%), Positives = 316/527 (59%), Gaps = 18/527 (3%)
Query: 22 IEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNP 81
I C+ +R+L +IH + S + + I R + + YA +F+ +
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDL-HHRDLDYAHKIFNQMPQR 88
Query: 82 DLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGAS 141
+ +N +IR ++ D +D+ + Y+ M + + PN TFP ++K C +
Sbjct: 89 NCFSWNTIIRGFSESD--EDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQE 146
Query: 142 GEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF-------DEIPVTD------ 188
G+ +H +K+GF D F ++L+ +Y+ CG + +AR LF D + +TD
Sbjct: 147 GKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDG 206
Query: 189 -VVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQ 247
+V WN M+ GY+R G A LF KM ++++SWN++I+G G K+A+E+F EM+
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK 266
Query: 248 QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQ 307
+ ++P+ +T+ SVL A ++LG+++ G+W+H Y +GI D V+G+AL++MY KCG+++
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIE 326
Query: 308 QAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACA 367
+A +FE +P ++ W+AMI+ FA+HG A DCF +M +AGV+P+ V ++ LL+AC+
Sbjct: 327 KAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACS 386
Query: 368 HSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVW 427
H GLVE+GR F M V +EP++ HY CMVDLL R+ L DE+ I +MP++PD +W
Sbjct: 387 HGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIW 446
Query: 428 GALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKER 487
ALLG C+M GNVE+G++VA L+D+ PH+ Y+ L ++Y G + +R +KE+
Sbjct: 447 KALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEK 506
Query: 488 RVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMKI 534
++K PGCS+I+I+GV+ EF S K++ +L + +++++
Sbjct: 507 DIRKD-PGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRL 552
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/513 (37%), Positives = 312/513 (60%), Gaps = 12/513 (2%)
Query: 14 LKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATN 73
++N +++ K+ E K+I+ I+ SS ++T+++ C K YAT
Sbjct: 9 VENYFIPFLQRVKSRNEWKKINASIIIHGLSQSS---FMVTKMVDFCD--KIEDMDYATR 63
Query: 74 VFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGI-FPNCLTFPFLIKG 132
+F+ ++NP++ +YN +IRAY + +C + +YK++L P+ TFPF+ K
Sbjct: 64 LFNQVSNPNVFLYNSIIRAYT-----HNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKS 118
Query: 133 CTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTW 192
C G+ VH + KFG V N+LI++YM L +A K+FDE+ DV++W
Sbjct: 119 CASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISW 178
Query: 193 NSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVK 252
NS++ GY R G + A LF M K I+SW ++I+G G EA++ F EMQ ++
Sbjct: 179 NSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIE 238
Query: 253 PDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEI 312
PD+I++ SVL +CAQLG+++ GKW+H Y R G + AL+ MY KCG++ QA ++
Sbjct: 239 PDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQL 298
Query: 313 FEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLV 372
F +M KD +W+ MIS +A HG A + F EM+RA VKPN +TF+GLLSAC+H G+
Sbjct: 299 FGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMW 358
Query: 373 EQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLG 432
++G FD+M++ Y IEP++ HY C++D+L+RA + +V + ++MPM+PD +WG+LL
Sbjct: 359 QEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLS 418
Query: 433 GCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKK 492
C+ GN+++ HL++LEP + Y+ L +IY G+++ R+R +++ + KK
Sbjct: 419 SCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENM-KK 477
Query: 493 IPGCSMIEINGVVQEFSAGGSSELPMKDLVLIL 525
PG S+IE+N +VQEF +G +S+ ++ ++L
Sbjct: 478 TPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVL 510
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/530 (37%), Positives = 313/530 (59%), Gaps = 12/530 (2%)
Query: 1 MTMISLIESKSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSC 60
+T+ ++ S SL+ L + QC +RELK+IH ++ + + SD L F C
Sbjct: 11 VTVPAMPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLI--SDTVTASRVLAFCC 68
Query: 61 SFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDG-- 118
+ YA VF IN+ + V+N +IR ++ + A+ ++ MLC
Sbjct: 69 A--SPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPE-----MAISIFIDMLCSSPS 121
Query: 119 IFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNAR 178
+ P LT+P + K R G +H V+K G D F N+++++Y+TCG L A
Sbjct: 122 VKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAW 181
Query: 179 KLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKE 238
++F + DVV WNSM++G+ + G +D A +LF +M +N +SWNS+I+G V+ G K+
Sbjct: 182 RIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKD 241
Query: 239 ALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVN 298
AL++F EMQ+ VKPD T+ S+L+ACA LGA + G+W+H Y+ RN E + ++ TAL++
Sbjct: 242 ALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALID 301
Query: 299 MYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVT 358
MY KCG +++ +FE P+K S W +MI A +G +A D F E+ER+G++P+ V+
Sbjct: 302 MYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVS 361
Query: 359 FVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSM 418
F+G+L+ACAHSG V + F +MK Y+IEP + HY MV++L A L +E+ LI++M
Sbjct: 362 FIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNM 421
Query: 419 PMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAK 478
P+E D +W +LL C+ GNVE+ ++ A L L+P Y+ L + Y G F+ A
Sbjct: 422 PVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAV 481
Query: 479 RIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRL 528
R L+KER+++K++ GCS IE++ V EF + G + ++ +LD L
Sbjct: 482 EQRLLMKERQMEKEV-GCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDIL 530
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 183/447 (40%), Positives = 273/447 (61%), Gaps = 6/447 (1%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
F+ G A VF DL +N +I Y + + +A+ +YK M +G+ P
Sbjct: 201 FASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAE-----KAIYVYKLMESEGVKP 255
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ +T L+ C+ D G+ + V + G + N+L++++ CG + AR++F
Sbjct: 256 DDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIF 315
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
D + +V+W +M+ GY R G LD + LF M K+++ WN++I G VQ ++AL
Sbjct: 316 DNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALA 375
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
LF EMQ + KPD+IT+ LSAC+QLGA+D G W+H Y+ + + +V +GT+LV+MY
Sbjct: 376 LFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYA 435
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KCG + +A +F + +++ +TA+I ALHG A F EM AG+ P+ +TF+G
Sbjct: 436 KCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIG 495
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME 421
LLSAC H G+++ GR F MK + + PQ+ HY+ MVDLL RA L +E+ L+ SMPME
Sbjct: 496 LLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPME 555
Query: 422 PDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIR 481
D VWGALL GC+MHGNVELGEK A L++L+P + Y+ L +YG+A ++ AKR R
Sbjct: 556 ADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRAR 615
Query: 482 NLLKERRVQKKIPGCSMIEINGVVQEF 508
++ ER V+ KIPGCS IE+NG+V EF
Sbjct: 616 RMMNERGVE-KIPGCSSIEVNGIVCEF 641
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 226/480 (47%), Gaps = 79/480 (16%)
Query: 9 SKSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSF 68
+ S L N L L+E+CK L LK+I Q++ + + D + +RL+ C+ S+
Sbjct: 47 THSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLI--LDPF-ASSRLIAFCALSESRYL 103
Query: 69 TYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKML---CDGIFPNCLT 125
Y+ + I NP++ +N+ IR ++ + + + +LYK+ML C P+ T
Sbjct: 104 DYSVKILKGIENPNIFSWNVTIRGFSESENPKE-----SFLLYKQMLRHGCCESRPDHFT 158
Query: 126 FPFLIKGCTRWMDGASGEIVHAQVVK--FGFLSDVFNGNSLINLYMTCGLLSNARKLFDE 183
+P L K C + G ++ V+K +S V N + I+++ +CG + NARK+FDE
Sbjct: 159 YPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNAS--IHMFASCGDMENARKVFDE 216
Query: 184 IPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELF 243
PV D+V+WN ++ GY + G A++A+ ++
Sbjct: 217 SPVRDLVSWNCLINGYKKIGE-------------------------------AEKAIYVY 245
Query: 244 HEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKC 303
M+ VKPD +T+ ++S+C+ LG ++ GK + Y++ NG+ + + AL++M+ KC
Sbjct: 246 KLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKC 305
Query: 304 GLVQQAFEIFEEMPEKDTSAWTAMISVFALHGL--------------------------- 336
G + +A IF+ + ++ +WT MIS +A GL
Sbjct: 306 GDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSV 365
Query: 337 ----GWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQV 392
G A F EM+ + KP+ +T + LSAC+ G ++ G W +++ Y + V
Sbjct: 366 QAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK-YSLSLNV 424
Query: 393 YHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLID 452
+VD+ ++ E++ + + + + A++GG +HG+ +ID
Sbjct: 425 ALGTSLVDMYAKCGNISEALSVFHGIQTRNSL-TYTAIIGGLALHGDASTAISYFNEMID 483
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 352 bits (902), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 183/512 (35%), Positives = 316/512 (61%), Gaps = 14/512 (2%)
Query: 11 SLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSC----SFSKYG 66
+L K+ L++ C + +LK IH +L + H + +RLL C +F+K
Sbjct: 8 TLRFKHPKLALLQSCSSFSDLKIIHGFLLRT---HLISDVFVASRLLALCVDDSTFNKPT 64
Query: 67 SFT-YATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLT 125
+ YA +F I NP+L V+N++IR ++ G + +A Y +ML I+P+ +T
Sbjct: 65 NLLGYAYGIFSQIQNPNLFVFNLLIRCFS--TGAEPS---KAFGFYTQMLKSRIWPDNIT 119
Query: 126 FPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP 185
FPFLIK + GE H+Q+V+FGF +DV+ NSL+++Y CG ++ A ++F ++
Sbjct: 120 FPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMG 179
Query: 186 VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHE 245
DVV+W SMV GY + G ++NA ++F +M +N+ +W+ +I G + ++A++LF
Sbjct: 180 FRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEF 239
Query: 246 MQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGL 305
M++ V ++ + SV+S+CA LGA++ G+ + Y+ ++ + ++++GTALV+M+ +CG
Sbjct: 240 MKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGD 299
Query: 306 VQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSA 365
+++A +FE +PE D+ +W+++I A+HG KA F +M G P VTF +LSA
Sbjct: 300 IEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSA 359
Query: 366 CAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVY 425
C+H GLVE+G ++ MK+ + IEP++ HY C+VD+L RA E+ I M ++P+
Sbjct: 360 CSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAP 419
Query: 426 VWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLK 485
+ GALLG C+++ N E+ E+V LI ++P + +Y+ L +IY AG++D + +R+++K
Sbjct: 420 ILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMK 479
Query: 486 ERRVQKKIPGCSMIEINGVVQEFSAGGSSELP 517
E+ V KK PG S+IEI+G + +F+ G + P
Sbjct: 480 EKLV-KKPPGWSLIEIDGKINKFTMGDDQKHP 510
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 349 bits (896), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/473 (38%), Positives = 287/473 (60%), Gaps = 11/473 (2%)
Query: 69 TYATNVFHMIN-NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFP 127
YA +FH+ + + ++NI+IRA RH + +Y +M + P+ TFP
Sbjct: 9 AYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRH--SPISVYLRMRNHRVSPDFHTFP 66
Query: 128 FLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVT 187
FL+ + G+ HAQ++ FG D F SL+N+Y +CG L +A+++FD+
Sbjct: 67 FLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSK 126
Query: 188 DVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQ 247
D+ WNS+V Y + G +D+A LF +M +N+ISW+ +I G V G KEAL+LF EMQ
Sbjct: 127 DLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQ 186
Query: 248 -----QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGK 302
+ V+P++ T+++VLSAC +LGA++ GKWVH+Y+ + +E D+V+GTAL++MY K
Sbjct: 187 LPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAK 246
Query: 303 CGLVQQAFEIFEEM-PEKDTSAWTAMISVFALHGLGWKAFDCFLEMERA-GVKPNHVTFV 360
CG +++A +F + +KD A++AMI A++GL + F F EM + + PN VTFV
Sbjct: 247 CGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFV 306
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
G+L AC H GL+ +G+ F +M + I P + HY CMVDL R+ L E+ I SMPM
Sbjct: 307 GILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPM 366
Query: 421 EPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
EPDV +WG+LL G +M G+++ E LI+L+P N Y+ L ++Y K GR+ K I
Sbjct: 367 EPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCI 426
Query: 481 RNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
R+ ++ + + K+PGCS +E+ GVV EF G S+ + + +LD + ++
Sbjct: 427 RHEMEVKGIN-KVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLR 478
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 180/518 (34%), Positives = 306/518 (59%), Gaps = 14/518 (2%)
Query: 18 LSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHM 77
L+ LI++ +++ E+ +IH IL NL +Y ++ L +++ +G ++ +FH
Sbjct: 32 LAVLIDKSQSVDEVLQIHAAILRH-NLLLHPRYPVLN-LKLHRAYASHGKIRHSLALFHQ 89
Query: 78 INNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWM 137
+PDL ++ I A ++G+ D+ F +LY ++L I PN TF L+K C+
Sbjct: 90 TIDPDLFLFTAAINT-ASINGLKDQAF----LLYVQLLSSEINPNEFTFSSLLKSCST-- 142
Query: 138 DGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVI 197
SG+++H V+KFG D + L+++Y G + +A+K+FD +P +V+ +M+
Sbjct: 143 --KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMIT 200
Query: 198 GYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEM-QQISVKPDKI 256
Y + G ++ A LF M ++I+SWN +I G Q G +AL LF ++ + KPD+I
Sbjct: 201 CYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEI 260
Query: 257 TIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEM 316
T+ + LSAC+Q+GA++ G+W+H +++ + I +V + T L++MY KCG +++A +F +
Sbjct: 261 TVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDT 320
Query: 317 PEKDTSAWTAMISVFALHGLGWKAFDCFLEMER-AGVKPNHVTFVGLLSACAHSGLVEQG 375
P KD AW AMI+ +A+HG A F EM+ G++P +TF+G L ACAH+GLV +G
Sbjct: 321 PRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEG 380
Query: 376 RWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQ 435
F+ M + Y I+P++ HY C+V LL RA + I++M M+ D +W ++LG C+
Sbjct: 381 IRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCK 440
Query: 436 MHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPG 495
+HG+ LG+++A +LI L N Y+ L +IY G ++ ++RNL+KE+ + K+ PG
Sbjct: 441 LHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKE-PG 499
Query: 496 CSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
S IEI V EF AG K++ +L ++ +K
Sbjct: 500 ISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIK 537
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 337 bits (864), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 189/508 (37%), Positives = 298/508 (58%), Gaps = 16/508 (3%)
Query: 11 SLTLKNALSRLIEQCK----NLRELKRIHT-QILTSPNLHSSDQYHLITRLLFSCSFSKY 65
+L+L + L+ + K NL+ LK+ H I+T N + + + + + +CS +
Sbjct: 7 ALSLSSGLNWFVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLN----VAKFIEACSNA-- 60
Query: 66 GSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLT 125
G YA +VF P+ ++N MIRA + +D + A+ +Y+K+ P+ T
Sbjct: 61 GHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSI--AITVYRKLWALCAKPDTFT 118
Query: 126 FPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP 185
FPF++K R D G +H QVV FGF S V LI +Y +CG L +ARK+FDE+
Sbjct: 119 FPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEML 178
Query: 186 VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNG--KNIISWNSIITGLVQGGLAKEALELF 243
V DV WN+++ GY + G +D A L M +N +SW +I+G + G A EA+E+F
Sbjct: 179 VKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVF 238
Query: 244 HEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKC 303
M +V+PD++T+ +VLSACA LG+++ G+ + SY+ G+ V + A+++MY K
Sbjct: 239 QRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKS 298
Query: 304 GLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLL 363
G + +A ++FE + E++ WT +I+ A HG G +A F M +AGV+PN VTF+ +L
Sbjct: 299 GNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAIL 358
Query: 364 SACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPD 423
SAC+H G V+ G+ F+ M+ Y I P + HY CM+DLL RA E+ +I+SMP + +
Sbjct: 359 SACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKAN 418
Query: 424 VYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNL 483
+WG+LL +H ++ELGE+ LI LEP+N YM L ++Y GR+D ++ +RN+
Sbjct: 419 AAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNM 478
Query: 484 LKERRVQKKIPGCSMIEINGVVQEFSAG 511
+K V KK+ G S IE+ V +F +G
Sbjct: 479 MKGIGV-KKMAGESSIEVENRVYKFISG 505
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 178/500 (35%), Positives = 286/500 (57%), Gaps = 15/500 (3%)
Query: 12 LTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYA 71
L+ + L ++ CKN+ + IH +I+ + H D + ++ L+ CS S YA
Sbjct: 26 LSRRKTLISVLRSCKNIAHVPSIHAKIIRT--FHDQDAF-VVFELIRVCS--TLDSVDYA 80
Query: 72 TNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIK 131
+VF ++NP++ +Y MI + D + LY +M+ + + P+ ++K
Sbjct: 81 YDVFSYVSNPNVYLYTAMIDGFVSSGRSAD-----GVSLYHRMIHNSVLPDNYVITSVLK 135
Query: 132 GCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVT 191
C D +HAQV+K GF S G ++ +Y G L NA+K+FDE+P D V
Sbjct: 136 AC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVA 191
Query: 192 WNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISV 251
M+ Y G + AL+LF+ + K+ + W ++I GLV+ +ALELF EMQ +V
Sbjct: 192 ATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENV 251
Query: 252 KPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFE 311
++ T VLSAC+ LGA++ G+WVHS++ +E +G AL+NMY +CG + +A
Sbjct: 252 SANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARR 311
Query: 312 IFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGL 371
+F M +KD ++ MIS A+HG +A + F +M G +PN VT V LL+AC+H GL
Sbjct: 312 VFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGL 371
Query: 372 VEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALL 431
++ G F+ MKRV+ +EPQ+ HY C+VDLL R +E+ I ++P+EPD + G LL
Sbjct: 372 LDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLL 431
Query: 432 GGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQK 491
C++HGN+ELGEK+A L + E + Y+ L ++Y +G++ + IR +++ ++K
Sbjct: 432 SACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEK 491
Query: 492 KIPGCSMIEINGVVQEFSAG 511
+ PGCS IE++ + EF G
Sbjct: 492 E-PGCSTIEVDNQIHEFLVG 510
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 333 bits (855), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 183/554 (33%), Positives = 297/554 (53%), Gaps = 50/554 (9%)
Query: 18 LSRLIEQCKNLRELKRIHTQI-LTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFH 76
L ++++ ++R L+ +H++I L +SS L+ +++ A VF
Sbjct: 45 LGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMR------AYASLKDVASARKVFD 98
Query: 77 MINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRW 136
I ++ + N+MIR+Y V++ + + ++ M + P+ TFP ++K C+
Sbjct: 99 EIPERNVIIINVMIRSY-----VNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCS 153
Query: 137 MDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMV 196
G +H K G S +F GN L+++Y CG LS AR + DE+ DVV+WNS+V
Sbjct: 154 GTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLV 213
Query: 197 IGYLRNGGLDNAL-------------------------------------DLFRKMNGKN 219
+GY +N D+AL D+F KM K+
Sbjct: 214 VGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKS 273
Query: 220 IISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHS 279
++SWN +I ++ + EA+EL+ M+ +PD ++I SVL AC A+ GK +H
Sbjct: 274 LVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHG 333
Query: 280 YLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWK 339
Y+ R + ++++ AL++MY KCG +++A ++FE M +D +WTAMIS + G G
Sbjct: 334 YIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCD 393
Query: 340 AFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMV 399
A F +++ +G+ P+ + FV L+AC+H+GL+E+GR CF +M Y I P++ H ACMV
Sbjct: 394 AVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMV 453
Query: 400 DLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHA 459
DLL RA E+ I+ M MEP+ VWGALLG C++H + ++G A L L P
Sbjct: 454 DLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSG 513
Query: 460 FYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMK 519
+Y+ L +IY KAGR++ IRN++K + + KK PG S +E+N ++ F G S
Sbjct: 514 YYVLLSNIYAKAGRWEEVTNIRNIMKSKGL-KKNPGASNVEVNRIIHTFLVGDRSHPQSD 572
Query: 520 DLVLILDRLCNEMK 533
++ LD L +MK
Sbjct: 573 EIYRELDVLVKKMK 586
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 332 bits (851), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 170/505 (33%), Positives = 276/505 (54%), Gaps = 39/505 (7%)
Query: 21 LIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINN 80
E+ K+L E+++ H +L + H D + + F+ + + + +YA ++ + I +
Sbjct: 45 FTERAKSLTEIQQAHAFMLKTGLFH--DTFSASKLVAFAATNPEPKTVSYAHSILNRIGS 102
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGA 140
P+ +N +IRAYA + A+ ++++ML +FP+ +F F++K C +
Sbjct: 103 PNGFTHNSVIRAYANSSTPE-----VALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFE 157
Query: 141 SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYL 200
G +H +K G ++DVF N+L+N+Y G ARK+ D +PV D V+WNS++ YL
Sbjct: 158 EGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYL 217
Query: 201 RNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISV--------- 251
G +D A LF +M +N+ SWN +I+G GL KEA E+F M V
Sbjct: 218 EKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTA 277
Query: 252 -----------------------KPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIEC 288
KPD T+ SVLSACA LG++ G+WVH Y+ ++GIE
Sbjct: 278 YAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEI 337
Query: 289 DVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEME 348
+ + TALV+MY KCG + +A E+F ++D S W ++IS ++HGLG A + F EM
Sbjct: 338 EGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMV 397
Query: 349 RAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLF 408
G KPN +TF+G+LSAC H G+++Q R F++M VY +EP + HY CMVDLL R
Sbjct: 398 YEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKI 457
Query: 409 DESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIY 468
+E+ L+ +P + + +LLG C+ G +E E++A L++L + + Y + ++Y
Sbjct: 458 EEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLY 517
Query: 469 GKAGRFDAAKRIRNLLKERRVQKKI 493
GR++ R ++ RV + +
Sbjct: 518 ASDGRWEKVIDGRRNMRAERVNRSL 542
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 330 bits (846), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 176/521 (33%), Positives = 303/521 (58%), Gaps = 14/521 (2%)
Query: 14 LKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATN 73
L +S +I + ++L LK++ + ++ S HS + L +LL C+ + + +YA
Sbjct: 23 LNQFISAVISKSRHLNHLKQVQSFMIVSGLSHS---HFLCFKLLRFCTL-RLCNLSYARF 78
Query: 74 VFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGI-FPNCLTFPFLIKG 132
+F + P+ +Y ++ AY+ + H A ++ M+ + PN +P ++K
Sbjct: 79 IFDRFSFPNTHLYAAVLTAYSSSLPL---HASSAFSFFRLMVNRSVPRPNHFIYPLVLKS 135
Query: 133 CTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTC-GLLSNARKLFDEIPVTDVVT 191
S +VH + K GF V +L++ Y + ++ AR+LFDE+ +VV+
Sbjct: 136 TPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVS 195
Query: 192 WNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEM-QQIS 250
W +M+ GY R+G + NA+ LF M +++ SWN+I+ Q GL EA+ LF M + S
Sbjct: 196 WTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPS 255
Query: 251 VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAF 310
++P+++T+ VLSACAQ G + K +H++ R + DV + +LV++YGKCG +++A
Sbjct: 256 IRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEAS 315
Query: 311 EIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGV---KPNHVTFVGLLSACA 367
+F+ +K +AW +MI+ FALHG +A F EM + + KP+H+TF+GLL+AC
Sbjct: 316 SVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACT 375
Query: 368 HSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVW 427
H GLV +GR FD+M + IEP++ HY C++DLL RA FDE++ ++ +M M+ D +W
Sbjct: 376 HGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIW 435
Query: 428 GALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKER 487
G+LL C++HG+++L E +L+ L P+N + + ++YG+ G ++ A+R R ++K +
Sbjct: 436 GSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQ 495
Query: 488 RVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRL 528
K PG S IEI+ V +F + S +++ +ILD L
Sbjct: 496 NAYKP-PGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 178/496 (35%), Positives = 281/496 (56%), Gaps = 11/496 (2%)
Query: 21 LIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINN 80
L++ +E+++IH ++ L HL+ + + + S + YA +
Sbjct: 12 LLDSGITFKEVRQIHAKLYVDGTLKDD---HLVGHFVKAVALSDHKYLDYANQILDRSEK 68
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDG--IFPNCLTFPFLIKGCTRWMD 138
P L N MIRA+ V ++ F Y+++L G + P+ T FL++ CT
Sbjct: 69 PTLFALNSMIRAHC-KSPVPEKSF----DFYRRILSSGNDLKPDNYTVNFLVQACTGLRM 123
Query: 139 GASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIG 198
+G VH ++ GF +D LI+LY G L + K+F+ IP D V +MV
Sbjct: 124 RETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTA 183
Query: 199 YLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITI 258
R G + A LF M ++ I+WN++I+G Q G ++EAL +FH MQ VK + + +
Sbjct: 184 CARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAM 243
Query: 259 ASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPE 318
SVLSAC QLGA+D G+W HSY+ RN I+ V + T LV++Y KCG +++A E+F M E
Sbjct: 244 ISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEE 303
Query: 319 KDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWC 378
K+ W++ ++ A++G G K + F M++ GV PN VTFV +L C+ G V++G+
Sbjct: 304 KNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRH 363
Query: 379 FDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHG 438
FD M+ + IEPQ+ HY C+VDL +RA +++V +I+ MPM+P VW +LL +M+
Sbjct: 364 FDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYK 423
Query: 439 NVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSM 498
N+ELG + +++LE NH Y+ L +IY + +D +R +K + V+K+ PGCS+
Sbjct: 424 NLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQ-PGCSV 482
Query: 499 IEINGVVQEFSAGGSS 514
+E+NG V EF G S
Sbjct: 483 MEVNGEVHEFFVGDKS 498
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 328 bits (840), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 171/424 (40%), Positives = 259/424 (61%), Gaps = 2/424 (0%)
Query: 106 RAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLI 165
A+ ++ M+ G+ P+ ++ I C++ + G+ H V++ GF S N+LI
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 166 NLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNS 225
++YM C A ++FD + VVTWNS+V GY+ NG +D A + F M KNI+SWN+
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 226 IITGLVQGGLAKEALELFHEMQ-QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRN 284
II+GLVQG L +EA+E+F MQ Q V D +T+ S+ SAC LGA+D KW++ Y+ +N
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 285 GIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCF 344
GI+ DV +GT LV+M+ +CG + A IF + +D SAWTA I A+ G +A + F
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 345 LEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSR 404
+M G+KP+ V FVG L+AC+H GLV+QG+ F M +++ + P+ HY CMVDLL R
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 405 ARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNL 464
A L +E+V LI MPMEP+ +W +LL C++ GNVE+ A + L P Y+ L
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLL 679
Query: 465 CDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLI 524
++Y AGR++ ++R +KE+ ++K PG S I+I G EF++G S M ++ +
Sbjct: 680 SNVYASAGRWNDMAKVRLSMKEKGLRKP-PGTSSIQIRGKTHEFTSGDESHPEMPNIEAM 738
Query: 525 LDRL 528
LD +
Sbjct: 739 LDEV 742
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 207/424 (48%), Gaps = 46/424 (10%)
Query: 22 IEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLF-SCSFSKYGSFTYATNVFHMINN 80
++ CK + ELK H + LT L + IT+L+ SC S ++A VF +
Sbjct: 39 LKNCKTIDELKMFH-RSLTKQGL--DNDVSTITKLVARSCELGTRESLSFAKEVFENSES 95
Query: 81 -PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDG 139
+YN +IR YA ++ A++L+ +M+ GI P+ TFPF + C +
Sbjct: 96 YGTCFMYNSLIRGYASSGLCNE-----AILLFLRMMNSGISPDKYTFPFGLSACAKSRAK 150
Query: 140 ASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGY 199
+G +H +VK G+ D+F NSL++ Y CG L +ARK+FDE+ +VV+W SM+ GY
Sbjct: 151 GNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGY 210
Query: 200 LRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIA 259
R +A+DLF +M ++ V P+ +T+
Sbjct: 211 ARRDFAKDAVDLFFRM------------------------------VRDEEVTPNSVTMV 240
Query: 260 SVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK 319
V+SACA+L ++ G+ V++++R +GIE + ++ +ALV+MY KC + A +F+E
Sbjct: 241 CVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGAS 300
Query: 320 DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCF 379
+ AM S + GL +A F M +GV+P+ ++ + +S+C+ + G+ C
Sbjct: 301 NLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCH 360
Query: 380 DVMKRVYLIEPQVYHYAC--MVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMH 437
+ R + + C ++D+ + D + + M V W +++ G +
Sbjct: 361 GYVLRNGF---ESWDNICNALIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSIVAGYVEN 416
Query: 438 GNVE 441
G V+
Sbjct: 417 GEVD 420
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/424 (40%), Positives = 259/424 (61%), Gaps = 2/424 (0%)
Query: 106 RAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLI 165
A+ ++ M+ G+ P+ ++ I C++ + G+ H V++ GF S N+LI
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 166 NLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNS 225
++YM C A ++FD + VVTWNS+V GY+ NG +D A + F M KNI+SWN+
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 226 IITGLVQGGLAKEALELFHEMQ-QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRN 284
II+GLVQG L +EA+E+F MQ Q V D +T+ S+ SAC LGA+D KW++ Y+ +N
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 285 GIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCF 344
GI+ DV +GT LV+M+ +CG + A IF + +D SAWTA I A+ G +A + F
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 345 LEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSR 404
+M G+KP+ V FVG L+AC+H GLV+QG+ F M +++ + P+ HY CMVDLL R
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 405 ARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNL 464
A L +E+V LI MPMEP+ +W +LL C++ GNVE+ A + L P Y+ L
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLL 679
Query: 465 CDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLI 524
++Y AGR++ ++R +KE+ ++K PG S I+I G EF++G S M ++ +
Sbjct: 680 SNVYASAGRWNDMAKVRLSMKEKGLRKP-PGTSSIQIRGKTHEFTSGDESHPEMPNIEAM 738
Query: 525 LDRL 528
LD +
Sbjct: 739 LDEV 742
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 214/444 (48%), Gaps = 48/444 (10%)
Query: 2 TMISLIESKSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLF-SC 60
T SL+ T A ++ CK + ELK H + LT L + IT+L+ SC
Sbjct: 21 TKPSLLNQSKCT--KATPSSLKNCKTIDELKMFH-RSLTKQGL--DNDVSTITKLVARSC 75
Query: 61 SFSKYGSFTYATNVFHMINN-PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGI 119
S ++A VF + +YN +IR YA ++ A++L+ +M+ GI
Sbjct: 76 ELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNE-----AILLFLRMMNSGI 130
Query: 120 FPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARK 179
P+ TFPF + C + +G +H +VK G+ D+F NSL++ Y CG L +ARK
Sbjct: 131 SPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARK 190
Query: 180 LFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEA 239
+FDE+ +VV+W SM+ GY R +A+DLF +M
Sbjct: 191 VFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM------------------------ 226
Query: 240 LELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNM 299
++ V P+ +T+ V+SACA+L ++ G+ V++++R +GIE + ++ +ALV+M
Sbjct: 227 ------VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 300 YGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
Y KC + A +F+E + AM S + GL +A F M +GV+P+ ++
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 360 VGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYAC--MVDLLSRARLFDESVILIRS 417
+ +S+C+ + G+ C + R + + C ++D+ + D + +
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGF---ESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 418 MPMEPDVYVWGALLGGCQMHGNVE 441
M + V W +++ G +G V+
Sbjct: 398 MSNKT-VVTWNSIVAGYVENGEVD 420
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/474 (35%), Positives = 280/474 (59%), Gaps = 13/474 (2%)
Query: 52 LITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLY 111
+ L C FS G A VF I D+ +N MI + D +A+ L+
Sbjct: 167 FVANSLIHCYFS-CGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPD-----KALELF 220
Query: 112 KKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTC 171
KKM + + + +T ++ C + + G V + + + ++ N+++++Y C
Sbjct: 221 KKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKC 280
Query: 172 GLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLV 231
G + +A++LFD + D VTW +M+ GY + + A ++ M K+I++WN++I+
Sbjct: 281 GSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYE 340
Query: 232 QGGLAKEALELFHEMQ-QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDV 290
Q G EAL +FHE+Q Q ++K ++IT+ S LSACAQ+GA++ G+W+HSY++++GI +
Sbjct: 341 QNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNF 400
Query: 291 VIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERA 350
+ +AL++MY KCG ++++ E+F + ++D W+AMI A+HG G +A D F +M+ A
Sbjct: 401 HVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEA 460
Query: 351 GVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDE 410
VKPN VTF + AC+H+GLV++ F M+ Y I P+ HYAC+VD+L R+ ++
Sbjct: 461 NVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEK 520
Query: 411 SVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGK 470
+V I +MP+ P VWGALLG C++H N+ L E L++LEP N ++ L +IY K
Sbjct: 521 AVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAK 580
Query: 471 AGRFDAAKRIRNLLKERRVQ--KKIPGCSMIEINGVVQEFSAGGSSELPMKDLV 522
G+++ +R K RV KK PGCS IEI+G++ EF +G ++ PM + V
Sbjct: 581 LGKWENVSELR---KHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAH-PMSEKV 630
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 146/463 (31%), Positives = 228/463 (49%), Gaps = 79/463 (17%)
Query: 13 TLKNALSR---LIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFT 69
T N SR LIE+C +LR+LK+ H ++ + SD Y ++L + S + S
Sbjct: 25 TTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTF--SDPYS-ASKLFAMAALSSFASLE 81
Query: 70 YATNVFHMINNPDLRVYNIMIRAYA-GMDGVDDRHFCRAMVLYKKMLCDG-IFPNCLTFP 127
YA VF I P+ +N +IRAYA G D V ++ + M+ + +PN TFP
Sbjct: 82 YARKVFDEIPKPNSFAWNTLIRAYASGPDPV------LSIWAFLDMVSESQCYPNKYTFP 135
Query: 128 FLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVT 187
FLIK + G+ +H VK SDVF NSLI+ Y +CG L +A K+F I
Sbjct: 136 FLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK 195
Query: 188 DVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQ 247
DVV+WNSM+ G+++ G D AL+LF+KM ++
Sbjct: 196 DVVSWNSMINGFVQKGSPDKALELFKKMESED---------------------------- 227
Query: 248 QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQ 307
VK +T+ VLSACA++ ++ G+ V SY+ N + ++ + A+++MY KCG ++
Sbjct: 228 ---VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 308 QA---FEIFEE----------------------------MPEKDTSAWTAMISVFALHGL 336
A F+ EE MP+KD AW A+IS + +G
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344
Query: 337 GWKAFDCFLEME-RAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHY 395
+A F E++ + +K N +T V LSACA G +E GRW +K+ + I +
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK-HGIRMNFHVT 403
Query: 396 ACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHG 438
+ ++ + S+ ++S + S+ + DV+VW A++GG MHG
Sbjct: 404 SALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG 445
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 140/330 (42%), Gaps = 52/330 (15%)
Query: 11 SLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTY 70
+LTL NA+ + +C ++ + KR+ + N+ T +L + S+ +
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNV-------TWTTMLDGYAISE--DYEA 316
Query: 71 ATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLI 130
A V + + D+ +N +I AY +G + +V ++ L + N +T +
Sbjct: 317 AREVLNSMPQKDIVAWNALISAYE-QNGKPNEAL---IVFHELQLQKNMKLNQITLVSTL 372
Query: 131 KGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVV 190
C + G +H+ + K G + ++LI++Y CG L +R++F+ + DV
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF 432
Query: 191 TWNSMVIGYLRNGGLDNALDLFRKMNGKNI----ISWNSIITGLVQGGLAKEALELFHEM 246
W++M+ G +G + A+D+F KM N+ +++ ++ GL EA LFH+M
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492
Query: 247 QQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLV 306
+ + G + K +V++ G+ G +
Sbjct: 493 E------------------SNYGIVPEEKHY----------------ACIVDVLGRSGYL 518
Query: 307 QQAFEIFEEMP-EKDTSAWTAMISVFALHG 335
++A + E MP TS W A++ +H
Sbjct: 519 EKAVKFIEAMPIPPSTSVWGALLGACKIHA 548
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 327 bits (838), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 180/529 (34%), Positives = 290/529 (54%), Gaps = 46/529 (8%)
Query: 8 ESKSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGS 67
++ T +L + CKN+R LK+IH ++ + + + ++ L++S S S G+
Sbjct: 5 QTNDRTTNRRRPKLWQNCKNIRTLKQIHASMVVNGLMSN---LSVVGELIYSASLSVPGA 61
Query: 68 FTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFP 127
YA +F I PD+ + N ++R A + + + LY +M G+ P+ TF
Sbjct: 62 LKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPE-----KTVSLYTEMEKRGVSPDRYTFT 116
Query: 128 FLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLL------------- 174
F++K C++ ++G H +VV+ GF+ + + N+LI + CG L
Sbjct: 117 FVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKA 176
Query: 175 ------------------SNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMN 216
A +LFDE+P D V WN M+ G L+ +D+A +LF +
Sbjct: 177 HKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFT 236
Query: 217 GKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKW 276
K++++WN++I+G V G KEAL +F EM+ PD +TI S+LSACA LG ++ GK
Sbjct: 237 EKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKR 296
Query: 277 VHSY-LRRNGIECDVVIGT----ALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVF 331
+H Y L + + +GT AL++MY KCG + +A E+F + ++D S W +I
Sbjct: 297 LHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGL 356
Query: 332 ALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQ 391
ALH + + F EM+R V PN VTF+G++ AC+HSG V++GR F +M+ +Y IEP
Sbjct: 357 ALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPN 415
Query: 392 VYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLI 451
+ HY CMVD+L RA +E+ + + SM +EP+ VW LLG C+++GNVELG+ L+
Sbjct: 416 IKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLL 475
Query: 452 DLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIE 500
+ Y+ L +IY G++D +++R + + RV KK G S+IE
Sbjct: 476 SMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRV-KKPTGVSLIE 523
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 326 bits (836), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/470 (35%), Positives = 271/470 (57%), Gaps = 6/470 (1%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+S G A VF D+ +N+MI Y M + + ++ L +M + + P
Sbjct: 180 YSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRM-----KEYEESIELLVEMERNLVSP 234
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+T ++ C++ D + VH V + + N+L+N Y CG + A ++F
Sbjct: 235 TSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIF 294
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
+ DV++W S+V GY+ G L A F +M ++ ISW +I G ++ G E+LE
Sbjct: 295 RSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLE 354
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
+F EMQ + PD+ T+ SVL+ACA LG+++ G+W+ +Y+ +N I+ DVV+G AL++MY
Sbjct: 355 IFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYF 414
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KCG ++A ++F +M ++D WTAM+ A +G G +A F +M+ ++P+ +T++G
Sbjct: 415 KCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLG 474
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME 421
+LSAC HSG+V+Q R F M+ + IEP + HY CMVD+L RA L E+ ++R MPM
Sbjct: 475 VLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMN 534
Query: 422 PDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIR 481
P+ VWGALLG ++H + + E A +++LEP N A Y LC+IY R+ + +R
Sbjct: 535 PNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVR 594
Query: 482 NLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNE 531
+ + + KK PG S+IE+NG EF AG S L +++ + L+ L E
Sbjct: 595 RKIVDVAI-KKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQE 643
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 146/548 (26%), Positives = 251/548 (45%), Gaps = 92/548 (16%)
Query: 6 LIESKSLTLKNALSRLIE---QCKNLRELKRIHTQILT---SPNLHSSDQYHLITRLLFS 59
L+ + + ++ N SR I CK + K++H+Q +T +PN + Q L +F
Sbjct: 22 LMSTITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPN--PTFQKKL---FVFW 76
Query: 60 CSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGI 119
CS G +YA +F I PD+ V+N MI+ ++ +D + + LY ML +G+
Sbjct: 77 CS-RLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGE-----GVRLYLNMLKEGV 130
Query: 120 FPNCLTFPFLIKGCTRWMDG---ASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSN 176
P+ TFPFL+ G R DG A G+ +H VVKFG S+++ N+L+ +Y CGL+
Sbjct: 131 TPDSHTFPFLLNGLKR--DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDM 188
Query: 177 ARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLA 236
AR +FD + +++ SWN +I+G +
Sbjct: 189 ARGVFD-------------------------------RRCKEDVFSWNLMISGYNRMKEY 217
Query: 237 KEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTAL 296
+E++EL EM++ V P +T+ VLSAC+++ D K VH Y+ E + + AL
Sbjct: 218 EESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENAL 277
Query: 297 VNMYGKCGLVQQAFEI-------------------------------FEEMPEKDTSAWT 325
VN Y CG + A I F++MP +D +WT
Sbjct: 278 VNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWT 337
Query: 326 AMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRV 385
MI + G ++ + F EM+ AG+ P+ T V +L+ACAH G +E G W + +
Sbjct: 338 IMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKN 397
Query: 386 YLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEK 445
+ V A ++D+ + +++ + M + D + W A++ G +G + K
Sbjct: 398 KIKNDVVVGNA-LIDMYFKCGCSEKAQKVFHDMD-QRDKFTWTAMVVGLANNGQGQEAIK 455
Query: 446 VALHLIDLEPH-NHAFYMNLCDIYGKAGRFDAAKR-IRNLLKERRVQKKIP--GC--SMI 499
V + D+ + Y+ + +G D A++ + + R++ + GC M+
Sbjct: 456 VFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDML 515
Query: 500 EINGVVQE 507
G+V+E
Sbjct: 516 GRAGLVKE 523
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 323 bits (827), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 182/508 (35%), Positives = 305/508 (60%), Gaps = 16/508 (3%)
Query: 6 LIESKSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKY 65
L S SL K+ L QCK++ EL +IHT ++T L S++ +++ L + S
Sbjct: 2 LKSSSSLVAKSILR---HQCKSMSELYKIHTLLIT---LGLSEEEPFVSQTLSFSALSSS 55
Query: 66 GSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLT 125
G YA +++P +N +IR ++ + R+ +++ +Y +ML G+ P+ +T
Sbjct: 56 GDVDYAYKFLSKLSDPPNYGWNFVIRGFS-----NSRNPEKSISVYIQMLRFGLLPDHMT 110
Query: 126 FPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP 185
+PFL+K +R + G +H VVK G D+F N+LI++Y + ++ARKLFDE+P
Sbjct: 111 YPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMP 170
Query: 186 VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHE 245
++VTWNS++ Y ++G + +A +F +M+ +++++W+S+I G V+ G +ALE+F +
Sbjct: 171 HKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQ 230
Query: 246 MQQI-SVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCG 304
M ++ S K +++T+ SV+ ACA LGA++ GK VH Y+ + V++ T+L++MY KCG
Sbjct: 231 MMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCG 290
Query: 305 LVQQAFEIFEEMPEKDTSA--WTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGL 362
+ A+ +F K+T A W A+I A HG ++ F +M + + P+ +TF+ L
Sbjct: 291 SIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCL 350
Query: 363 LSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEP 422
L+AC+H GLV++ W F + EP+ HYACMVD+LSRA L ++ I MP++P
Sbjct: 351 LAACSHGGLVKEA-WHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKP 409
Query: 423 DVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRN 482
+ GALL GC HGN+EL E V LI+L+PHN Y+ L ++Y +F AA+ +R
Sbjct: 410 TGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMRE 469
Query: 483 LLKERRVQKKIPGCSMIEINGVVQEFSA 510
++++ V KKI G S+++++G F A
Sbjct: 470 AMEKKGV-KKIAGHSILDLDGTRHRFIA 496
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 322 bits (825), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 185/526 (35%), Positives = 295/526 (56%), Gaps = 17/526 (3%)
Query: 2 TMISLIESKSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQY-HLITRLLFSC 60
T + K L + + +S+L + C NL ++K+IH +L DQ +++T+L+ +
Sbjct: 37 TFSEISNQKELLVSSLISKL-DDCINLNQIKQIHGHVLRK----GLDQSCYILTKLIRTL 91
Query: 61 SFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF 120
+ YA V + + ++ +IR YA ++G F A+ +Y M + I
Sbjct: 92 TKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYA-IEG----KFDEAIAMYGCMRKEEIT 146
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
P TF L+K C D G HAQ + V+ GN++I++Y+ C + ARK+
Sbjct: 147 PVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKV 206
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
FDE+P DV++W ++ Y R G ++ A +LF + K++++W +++TG Q +EAL
Sbjct: 207 FDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEAL 266
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECD--VVIGTALVN 298
E F M++ ++ D++T+A +SACAQLGA + +++G VVIG+AL++
Sbjct: 267 EYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALID 326
Query: 299 MYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEM-ERAGVKPNHV 357
MY KCG V++A +F M K+ +++MI A HG +A F M + +KPN V
Sbjct: 327 MYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTV 386
Query: 358 TFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRS 417
TFVG L AC+HSGLV+QGR FD M + + ++P HY CMVDLL R E++ LI++
Sbjct: 387 TFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKT 446
Query: 418 MPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAA 477
M +EP VWGALLG C++H N E+ E A HL +LEP Y+ L ++Y AG +
Sbjct: 447 MSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGV 506
Query: 478 KRIRNLLKERRVQKKIPGCS-MIEINGVVQEFSAGGSSELPMKDLV 522
R+R L+KE+ + KK P S +++ NG + +F G + PM + +
Sbjct: 507 LRVRKLIKEKGL-KKTPAVSWVVDKNGQMHKFFPGNLNH-PMSNKI 550
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 320 bits (821), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/492 (34%), Positives = 277/492 (56%), Gaps = 18/492 (3%)
Query: 16 NALSRLIEQCKNLRELKRIHTQILTSPNLHSS-DQYHLITRLLFS-CSFSKYGS-----F 68
++ S L++ C+ L+ L + H Q +TS + + Q + +LF+ S S S
Sbjct: 5 SSCSYLLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVV 64
Query: 69 TYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPF 128
+YAT+VF I NP +N +IR + + + + + +M + P+ TFPF
Sbjct: 65 SYATSVFRFITNPSTFCFNTIIR----ICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPF 120
Query: 129 LIKGCTRWMDGASG--EIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPV 186
+ K C +G + +H Q ++FG LSD+F N+LI +Y + +A +LFDE P
Sbjct: 121 VFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQ 180
Query: 187 TDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEM 246
DVVT+N ++ G ++ + A +LF M ++++SWNS+I+G Q +EA++LF EM
Sbjct: 181 RDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEM 240
Query: 247 QQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLV 306
+ +KPD + I S LSACAQ G GK +H Y +R + D + T LV+ Y KCG +
Sbjct: 241 VALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFI 300
Query: 307 QQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSAC 366
A EIFE +K W AMI+ A+HG G D F +M +G+KP+ VTF+ +L C
Sbjct: 301 DTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGC 360
Query: 367 AHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME----P 422
+HSGLV++ R FD M+ +Y + ++ HY CM DLL RA L +E+ +I MP +
Sbjct: 361 SHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNRE 420
Query: 423 DVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRN 482
+ W LLGGC++HGN+E+ EK A + L P + Y + ++Y A R++ ++R
Sbjct: 421 KLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVRE 480
Query: 483 LL-KERRVQKKI 493
++ ++++V+K +
Sbjct: 481 IIDRDKKVKKNV 492
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 320 bits (819), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 185/507 (36%), Positives = 278/507 (54%), Gaps = 40/507 (7%)
Query: 31 LKRIHTQILTSPNLHSSDQYH-LITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIM 89
L++IH +L + + +SD +H ++RL S Y+ VF NP L N M
Sbjct: 27 LRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPR---DINYSCRVFSQRLNPTLSHCNTM 83
Query: 90 IRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP-NCLTFPFLIKGCTRWMDGASGEIVHAQ 148
IRA++ + C L++ + + P N L+ F +K C + D G +H +
Sbjct: 84 IRAFSL-----SQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGK 138
Query: 149 VVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNA 208
+ GFLSD +L++LY TC ++A K+FDEIP D V+WN + YLRN +
Sbjct: 139 IFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDV 198
Query: 209 LDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQL 268
L LF KM V G VKPD +T L ACA L
Sbjct: 199 LVLFDKMKND------------VDG----------------CVKPDGVTCLLALQACANL 230
Query: 269 GAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMI 328
GA+D GK VH ++ NG+ + + LV+MY +CG + +A+++F M E++ +WTA+I
Sbjct: 231 GALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALI 290
Query: 329 SVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKR-VYL 387
S A++G G +A + F EM + G+ P T GLLSAC+HSGLV +G FD M+ +
Sbjct: 291 SGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFK 350
Query: 388 IEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVA 447
I+P ++HY C+VDLL RARL D++ LI+SM M+PD +W LLG C++HG+VELGE+V
Sbjct: 351 IKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVI 410
Query: 448 LHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQE 507
HLI+L+ Y+ L + Y G+++ +R+L+KE+R+ K PGCS IE+ G V E
Sbjct: 411 SHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTK-PGCSAIELQGTVHE 469
Query: 508 FSAGGSSELPMKDLVLILDRLCNEMKI 534
F S +++ +L + ++KI
Sbjct: 470 FIVDDVSHPRKEEIYKMLAEINQQLKI 496
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 200/527 (37%), Positives = 288/527 (54%), Gaps = 59/527 (11%)
Query: 21 LIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLL-FSCSFSKYGSFTYATNVFHMIN 79
L E C ++ +LK++H L + L ++L S SFS YA VF I
Sbjct: 54 LAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFS---DVNYAFRVFDSIE 110
Query: 80 NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDG-IFPNCLTFPFLIKGCTRWMD 138
N ++N +IRA A D A +LY+KML G P+ TFPF++K C
Sbjct: 111 NHSSFMWNTLIRACAH----DVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 166
Query: 139 GASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIG 198
+ G+ VH Q+VK GF DV+ N LI+LY +CG L ARK+
Sbjct: 167 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKV------------------ 208
Query: 199 YLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITI 258
F +M ++++SWNS+I LV+ G AL+LF EMQ+ S +PD T+
Sbjct: 209 -------------FDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTM 254
Query: 259 ASVLSACAQLGAIDHGKWVHSYLRRN---GIECDVVIGTALVNMYGKCGLVQQAFEIFEE 315
SVLSACA LG++ G W H++L R + DV++ +L+ MY KCG ++ A ++F+
Sbjct: 255 QSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQG 314
Query: 316 MPEKDTSAWTAMISVFALHGLGWKAFDCFLEM--ERAGVKPNHVTFVGLLSACAHSGLVE 373
M ++D ++W AMI FA HG +A + F M +R V+PN VTFVGLL AC H G V
Sbjct: 315 MQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVN 374
Query: 374 QGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGG 433
+GR FD+M R Y IEP + HY C+VDL++RA E++ ++ SMPM+PD +W +LL
Sbjct: 375 KGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDA 434
Query: 434 CQMHG-NVELGEKVALHLIDLEPHNHA-------FYMNLCDIYGKAGRFDAAKRIRNLLK 485
C G +VEL E++A ++I + N + Y+ L +Y A R++ +R L+
Sbjct: 435 CCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMS 494
Query: 486 ERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMK----DLVLILDRL 528
E ++K+ PGCS IEING+ EF AG +S K L +I DRL
Sbjct: 495 EHGIRKE-PGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRL 540
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 313 bits (803), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 173/522 (33%), Positives = 292/522 (55%), Gaps = 13/522 (2%)
Query: 13 TLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYAT 72
++ NAL + +C + L +H+ + D+ T + + K G F
Sbjct: 185 SVSNALVSVYSKCASSPSL--LHSARKVFDEILEKDERSWTTMM---TGYVKNGYFDLGE 239
Query: 73 NVFH-MINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIK 131
+ M +N L YN MI Y V+ + A+ + ++M+ GI + T+P +I+
Sbjct: 240 ELLEGMDDNMKLVAYNAMISGY-----VNRGFYQEALEMVRRMVSSGIELDEFTYPSVIR 294
Query: 132 GCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVT 191
C G+ VHA V++ S F+ NSL++LY CG AR +F+++P D+V+
Sbjct: 295 ACATAGLLQLGKQVHAYVLRREDFSFHFD-NSLVSLYYKCGKFDEARAIFEKMPAKDLVS 353
Query: 192 WNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISV 251
WN+++ GY+ +G + A +F++M KNI+SW +I+GL + G +E L+LF M++
Sbjct: 354 WNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGF 413
Query: 252 KPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFE 311
+P + + +CA LGA +G+ H+ L + G + + G AL+ MY KCG+V++A +
Sbjct: 414 EPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQ 473
Query: 312 IFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGL 371
+F MP D+ +W A+I+ HG G +A D + EM + G++P+ +T + +L+AC+H+GL
Sbjct: 474 VFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGL 533
Query: 372 VEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALL 431
V+QGR FD M+ VY I P HYA ++DLL R+ F ++ +I S+P +P +W ALL
Sbjct: 534 VDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALL 593
Query: 432 GGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQK 491
GC++HGN+ELG A L L P + YM L +++ G+++ R+R L+++R V+K
Sbjct: 594 SGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKK 653
Query: 492 KIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
++ CS IE+ V F +S + + + L L EM+
Sbjct: 654 EV-ACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMR 694
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 209/481 (43%), Gaps = 79/481 (16%)
Query: 27 NLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVY 86
+L+ + +H I+T + H++ RL+ + K YA +F I+ PD
Sbjct: 29 SLQLARAVHGNIIT---FGFQPRAHILNRLI--DVYCKSSELNYARQLFDEISEPDKIAR 83
Query: 87 NIMIRAYAGMDGVD--------------DRHFCRAMV--------------LYKKMLCDG 118
M+ Y + D AM+ L+ KM +G
Sbjct: 84 TTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143
Query: 119 IFPNCLTFPFLIKGCTRWMDGASGEI-VHAQVVK--FGFLSDVFNGNSLINLYMTCG--- 172
P+ TF ++ G D + HA +K G+++ V N+L+++Y C
Sbjct: 144 FKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSV--SNALVSVYSKCASSP 201
Query: 173 -LLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK-NIISWNSIITGL 230
LL +ARK+FDEI D +W +M+ GY++NG D +L M+ ++++N++I+G
Sbjct: 202 SLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGY 261
Query: 231 VQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSY-LRRNGIECD 289
V G +EALE+ M ++ D+ T SV+ ACA G + GK VH+Y LRR +
Sbjct: 262 VNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE--DFS 319
Query: 290 VVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTA----------------------- 326
+LV++Y KCG +A IFE+MP KD +W A
Sbjct: 320 FHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKE 379
Query: 327 --------MISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWC 378
MIS A +G G + F M+R G +P F G + +CA G G+
Sbjct: 380 KNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQY 439
Query: 379 FDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHG 438
+ ++ + + ++ + ++ + +E+ + R+MP D W AL+ HG
Sbjct: 440 HAQLLKIGF-DSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQHG 497
Query: 439 N 439
+
Sbjct: 498 H 498
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 27/176 (15%)
Query: 287 ECDVVIGTALVNMYGKCGLVQQAFEIFEEMP--EKDTSAWTAMISVFALHGLGWKAFDCF 344
E D + T +V+ Y G + A +FE+ P +DT + AMI+ F+ + G+ A + F
Sbjct: 77 EPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLF 136
Query: 345 LEMERAGVKPNHVTFVGLLSACA------------HSGLVEQGRWCFDVMKRVYLIEPQV 392
+M+ G KP++ TF +L+ A H+ ++ G + + V
Sbjct: 137 CKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALV---SV 193
Query: 393 YHY-ACMVDLLSRAR-LFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKV 446
Y A LL AR +FDE +E D W ++ G +G +LGE++
Sbjct: 194 YSKCASSPSLLHSARKVFDE--------ILEKDERSWTTMMTGYVKNGYFDLGEEL 241
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 176/569 (30%), Positives = 300/569 (52%), Gaps = 82/569 (14%)
Query: 22 IEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNP 81
+ +C NL ++K++H QI+ NLH + H+ +L+ + S + + A VF+ + P
Sbjct: 26 LPKCANLNQVKQLHAQIIRR-NLH--EDLHIAPKLISALSLCRQTNL--AVRVFNQVQEP 80
Query: 82 DLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCT--RWMDG 139
++ + N +IRA+A + +A ++ +M G+F + T+PFL+K C+ W+
Sbjct: 81 NVHLCNSLIRAHA-----QNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPV 135
Query: 140 ASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCG--------------------------- 172
+++H + K G SD++ N+LI+ Y CG
Sbjct: 136 V--KMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLG 193
Query: 173 ------LLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMN---------- 216
L +AR+LFDE+P D+++WN+M+ GY R + A +LF KM
Sbjct: 194 GLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTM 253
Query: 217 -----------------------GKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKP 253
KN+++W II G + GL KEA L +M +K
Sbjct: 254 VMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKF 313
Query: 254 DKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIF 313
D + S+L+AC + G + G +HS L+R+ + + + AL++MY KCG +++AF++F
Sbjct: 314 DAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVF 373
Query: 314 EEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVE 373
++P+KD +W M+ +HG G +A + F M R G++P+ VTF+ +L +C H+GL++
Sbjct: 374 NDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLID 433
Query: 374 QGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGG 433
+G F M++VY + PQV HY C+VDLL R E++ ++++MPMEP+V +WGALLG
Sbjct: 434 EGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGA 493
Query: 434 CQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKI 493
C+MH V++ ++V +L+ L+P + Y L +IY A ++ IR+ +K V+K
Sbjct: 494 CRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKP- 552
Query: 494 PGCSMIEINGVVQEFSAGGSSELPMKDLV 522
G S +E+ + EF+ S P D +
Sbjct: 553 SGASSVELEDGIHEFTVFDKSH-PKSDQI 580
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 312 bits (800), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 178/506 (35%), Positives = 273/506 (53%), Gaps = 16/506 (3%)
Query: 31 LKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMI 90
+K++H L + + D L+ RLL + YA +F N +YN +I
Sbjct: 4 IKQLHAHCLRTGVDETKD---LLQRLLL------IPNLVYARKLFDHHQNSCTFLYNKLI 54
Query: 91 RAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVV 150
+AY + ++VLY + DG+ P+ TF F+ + ++H+Q
Sbjct: 55 QAYYVHHQPHE-----SIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFF 109
Query: 151 KFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALD 210
+ GF SD F +LI Y G L AR++FDE+ DV WN+M+ GY R G + A++
Sbjct: 110 RSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAME 169
Query: 211 LFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQ-ISVKPDKITIASVLSACAQLG 269
LF M KN+ SW ++I+G Q G EAL++F M++ SVKP+ IT+ SVL ACA LG
Sbjct: 170 LFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLG 229
Query: 270 AIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEM-PEKDTSAWTAMI 328
++ G+ + Y R NG ++ + A + MY KCG++ A +FEE+ +++ +W +MI
Sbjct: 230 ELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMI 289
Query: 329 SVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLI 388
A HG +A F +M R G KP+ VTFVGLL AC H G+V +G+ F M+ V+ I
Sbjct: 290 GSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKI 349
Query: 389 EPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVAL 448
P++ HY CM+DLL R E+ LI++MPM+PD VWG LLG C HGNVE+ E +
Sbjct: 350 SPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASE 409
Query: 449 HLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEF 508
L LEP N + + +IY ++D R+R L+K+ + K +E+ V +F
Sbjct: 410 ALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKF 469
Query: 509 SAGGSSELPMKDLVLILDRLCNEMKI 534
+ S ++ +L+ + MK+
Sbjct: 470 TVEDKSHPRSYEIYQVLEEIFRRMKL 495
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 312 bits (799), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 172/524 (32%), Positives = 282/524 (53%), Gaps = 42/524 (8%)
Query: 21 LIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINN 80
L+ CKNLR L +IH + +D Y +L+ C+ S + YA +
Sbjct: 11 LLNSCKNLRALTQIHGLFIKYGV--DTDSY-FTGKLILHCAISISDALPYARRLLLCFPE 67
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDG-IFPNCLTFPFLIKGCTRWMDG 139
PD ++N ++R Y+ D + ++ ++ +M+ G +FP+ +F F+IK +
Sbjct: 68 PDAFMFNTLVRGYSESDEPHN-----SVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSL 122
Query: 140 ASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNS----- 194
+G +H Q +K G S +F G +LI +Y CG + ARK+FDE+ ++V WN+
Sbjct: 123 RTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITAC 182
Query: 195 --------------------------MVIGYLRNGGLDNALDLFRKMNGKNIISWNSIIT 228
M+ GY++ G L++A +F +M ++ +SW+++I
Sbjct: 183 FRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIV 242
Query: 229 GLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIEC 288
G+ G E+ F E+Q+ + P+++++ VLSAC+Q G+ + GK +H ++ + G
Sbjct: 243 GIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSW 302
Query: 289 DVVIGTALVNMYGKCGLVQQAFEIFEEMPEKD-TSAWTAMISVFALHGLGWKAFDCFLEM 347
V + AL++MY +CG V A +FE M EK +WT+MI+ A+HG G +A F EM
Sbjct: 303 IVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEM 362
Query: 348 ERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARL 407
GV P+ ++F+ LL AC+H+GL+E+G F MKRVY IEP++ HY CMVDL R+
Sbjct: 363 TAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGK 422
Query: 408 FDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDI 467
++ I MP+ P VW LLG C HGN+EL E+V L +L+P+N + L +
Sbjct: 423 LQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNA 482
Query: 468 YGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAG 511
Y AG++ IR + +R+ KK S++E+ + +F+AG
Sbjct: 483 YATAGKWKDVASIRKSMIVQRI-KKTTAWSLVEVGKTMYKFTAG 525
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 311 bits (797), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 157/473 (33%), Positives = 270/473 (57%), Gaps = 6/473 (1%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
++ G YA NVF +++ D+ +N MI Y VD+ A L+++M + P
Sbjct: 156 YASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDE-----AFKLFEEMKDSNVMP 210
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ + ++ C R + ++ +++ D +L+ +Y G + AR+ F
Sbjct: 211 DEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFF 270
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
++ V ++ +MV GY + G LD+A +F + K+++ W ++I+ V+ +EAL
Sbjct: 271 RKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALR 330
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
+F EM +KPD +++ SV+SACA LG +D KWVHS + NG+E ++ I AL+NMY
Sbjct: 331 VFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYA 390
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KCG + ++FE+MP ++ +W++MI+ ++HG A F M++ V+PN VTFVG
Sbjct: 391 KCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVG 450
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME 421
+L C+HSGLVE+G+ F M Y I P++ HY CMVDL RA L E++ +I SMP+
Sbjct: 451 VLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVA 510
Query: 422 PDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIR 481
+V +WG+L+ C++HG +ELG+ A +++LEP + + + +IY + R++ + IR
Sbjct: 511 SNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIR 570
Query: 482 NLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMKI 534
+++E+ V K+ G S I+ NG EF G ++ LD + +++K+
Sbjct: 571 RVMEEKNVFKE-KGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKL 622
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 207/432 (47%), Gaps = 23/432 (5%)
Query: 13 TLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYAT 72
T N + + CK+L +K++H IL + H + + L S + +YA
Sbjct: 10 TAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSF-----LFNLSVSSSSINLSYAL 64
Query: 73 NVFHMINNP-DLRVYNIMIRAYAGMDGVDDRHFCRAMVL-YKKMLCDGIFPNCLTFPFLI 130
NVF I +P + V+N +R + RA +L Y+++ G + +F ++
Sbjct: 65 NVFSSIPSPPESIVFNPFLRDLSRSSEP------RATILFYQRIRHVGGRLDQFSFLPIL 118
Query: 131 KGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVV 190
K ++ G +H K L D F +++Y +CG ++ AR +FDE+ DVV
Sbjct: 119 KAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVV 178
Query: 191 TWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQG----GLAKEALELFHEM 246
TWN+M+ Y R G +D A LF +M N++ I+ +V G + ++ +
Sbjct: 179 TWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL 238
Query: 247 QQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLV 306
+ V+ D + ++++ A G +D + + R+ + ++ + TA+V+ Y KCG +
Sbjct: 239 IENDVRMDTHLLTALVTMYAGAGCMDMAR---EFFRKMSVR-NLFVSTAMVSGYSKCGRL 294
Query: 307 QQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSAC 366
A IF++ +KD WT MIS + +A F EM +G+KP+ V+ ++SAC
Sbjct: 295 DDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISAC 354
Query: 367 AHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYV 426
A+ G++++ +W + V +E ++ ++++ ++ D + + MP +V
Sbjct: 355 ANLGILDKAKWVHSCI-HVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR-NVVS 412
Query: 427 WGALLGGCQMHG 438
W +++ MHG
Sbjct: 413 WSSMINALSMHG 424
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 110/239 (46%), Gaps = 11/239 (4%)
Query: 208 ALDLFRKM-NGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACA 266
AL++F + + I +N + L + + + + ++ + + D+ + +L A +
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 267 QLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTA 326
++ A+ G +H + CD + T ++MY CG + A +F+EM +D W
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 327 MISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVY 386
MI + GL +AF F EM+ + V P+ + ++SAC +G + R ++ +
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYE-----F 237
Query: 387 LIEPQV----YHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVE 441
LIE V + +V + + A D + R M + +++V A++ G G ++
Sbjct: 238 LIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR-NLFVSTAMVSGYSKCGRLD 295
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 311 bits (797), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 177/527 (33%), Positives = 290/527 (55%), Gaps = 21/527 (3%)
Query: 17 ALSRLIEQCKNLRELKR---IHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATN 73
+ + ++ C L ++ + +H+ I SP L SD Y I L +SK G+ A
Sbjct: 154 SFASVLSACSGLNDMNKGVQVHSLIAKSPFL--SDVY--IGSALVDM-YSKCGNVNDAQR 208
Query: 74 VFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGC 133
VF + + ++ +N +I + + A+ +++ ML + P+ +T +I C
Sbjct: 209 VFDEMGDRNVVSWNSLITCFE-----QNGPAVEALDVFQMMLESRVEPDEVTLASVISAC 263
Query: 134 TRWMDGASGEIVHAQVVKFGFL-SDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTW 192
G+ VH +VVK L +D+ N+ +++Y C + AR +FD +P+ +V+
Sbjct: 264 ASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAE 323
Query: 193 NSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVK 252
SM+ GY A +F KM +N++SWN++I G Q G +EAL LF +++ SV
Sbjct: 324 TSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVC 383
Query: 253 PDKITIASVLSACAQLGAIDHGKWVHSYLRRNGI------ECDVVIGTALVNMYGKCGLV 306
P + A++L ACA L + G H ++ ++G E D+ +G +L++MY KCG V
Sbjct: 384 PTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCV 443
Query: 307 QQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSAC 366
++ + +F +M E+D +W AMI FA +G G +A + F EM +G KP+H+T +G+LSAC
Sbjct: 444 EEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSAC 503
Query: 367 AHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYV 426
H+G VE+GR F M R + + P HY CMVDLL RA +E+ +I MPM+PD +
Sbjct: 504 GHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVI 563
Query: 427 WGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKE 486
WG+LL C++H N+ LG+ VA L+++EP N Y+ L ++Y + G+++ +R +++
Sbjct: 564 WGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRK 623
Query: 487 RRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
V K+ PGCS I+I G F S K + +LD L EM+
Sbjct: 624 EGVTKQ-PGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 189/371 (50%), Gaps = 5/371 (1%)
Query: 120 FPNCLTFPFLIKGCTRW-MDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNAR 178
F + F L+ C + + VHA V+K GF +++F N LI+ Y CG L + R
Sbjct: 16 FTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGR 75
Query: 179 KLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKE 238
++FD++P ++ TWNS+V G + G LD A LFR M ++ +WNS+++G Q +E
Sbjct: 76 QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135
Query: 239 ALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVN 298
AL F M + ++ + ASVLSAC+ L ++ G VHS + ++ DV IG+ALV+
Sbjct: 136 ALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVD 195
Query: 299 MYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVT 358
MY KCG V A +F+EM +++ +W ++I+ F +G +A D F M + V+P+ VT
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255
Query: 359 FVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSM 418
++SACA ++ G+ + + + + VD+ ++ E+ + SM
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 419 PMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAK 478
P+ +V +++ G M + + L + N + L Y + G + A
Sbjct: 316 PIR-NVIAETSMISGYAMAASTKAAR---LMFTKMAERNVVSWNALIAGYTQNGENEEAL 371
Query: 479 RIRNLLKERRV 489
+ LLK V
Sbjct: 372 SLFCLLKRESV 382
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/467 (24%), Positives = 212/467 (45%), Gaps = 83/467 (17%)
Query: 9 SKSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSF 68
S + ++N L +C +L + +++ ++ Q ++ T +K G
Sbjct: 52 SNEIFIQNRLIDAYSKCGSLEDGRQVFDKM---------PQRNIYTWNSVVTGLTKLGFL 102
Query: 69 TYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPF 128
A ++F + D +N M+ +A D ++ A+ + M +G N +F
Sbjct: 103 DEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE-----ALCYFAMMHKEGFVLNEYSFAS 157
Query: 129 LIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTD 188
++ C+ D G VH+ + K FLSDV+ G++L+++Y CG +++A+++FDE+ +
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Query: 189 VVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQ 248
VV+WNS++ + +NG A EAL++F M +
Sbjct: 218 VVSWNSLITCFEQNGP-------------------------------AVEALDVFQMMLE 246
Query: 249 ISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNG-IECDVVIGTALVNMYGKCGLVQ 307
V+PD++T+ASV+SACA L AI G+ VH + +N + D+++ A V+MY KC ++
Sbjct: 247 SRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIK 306
Query: 308 QAFEIFEEMP-------------------------------EKDTSAWTAMISVFALHGL 336
+A IF+ MP E++ +W A+I+ + +G
Sbjct: 307 EARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGE 366
Query: 337 GWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWC-FDVMKRVYLI----EPQ 391
+A F ++R V P H +F +L ACA + G V+K + E
Sbjct: 367 NEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDD 426
Query: 392 VYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHG 438
++ ++D+ + +E ++ R M ME D W A++ G +G
Sbjct: 427 IFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQNG 472
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 131/320 (40%), Gaps = 74/320 (23%)
Query: 249 ISVKPDKITIASVLSAC--AQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLV 306
+S D A +L +C ++L AI + ++VH+ + ++G ++ I L++ Y KCG +
Sbjct: 13 LSSFTDSSPFAKLLDSCIKSKLSAI-YVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSL 71
Query: 307 QQAFEIFEE-------------------------------MPEKDTSAWTAMISVFALHG 335
+ ++F++ MPE+D W +M+S FA H
Sbjct: 72 EDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHD 131
Query: 336 LGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHY 395
+A F M + G N +F +LSAC+ + +G ++ + + VY
Sbjct: 132 RCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFL-SDVYIG 190
Query: 396 ACMVDLLSR-------ARLFDE----------SVI-----------------LIRSMPME 421
+ +VD+ S+ R+FDE S+I ++ +E
Sbjct: 191 SALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVE 250
Query: 422 PDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMN--LCDIYGKAGRFDAAKR 479
PD +++ C +++G++V ++ + + ++ D+Y K R A+
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 480 IRNLLKERRVQKKIPGCSMI 499
I + + R V I SMI
Sbjct: 311 IFDSMPIRNV---IAETSMI 327
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 311 bits (796), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 186/557 (33%), Positives = 291/557 (52%), Gaps = 46/557 (8%)
Query: 9 SKSLTLKNA-LSRLIEQCKNLRELKR-IHTQILTSPNLHSSDQYHLITRLLFSCSFSKYG 66
S SL+L L ++I+QC + L+ + I TS N L+ + + +C+ +
Sbjct: 766 SASLSLAPPNLKKIIKQCSTPKLLESALAAMIKTSLN----QDCRLMNQFITACT--SFK 819
Query: 67 SFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTF 126
A + + P++ VYN + + + V H R++ LY +ML D + P+ T+
Sbjct: 820 RLDLAVSTMTQMQEPNVFVYNALFKGF-----VTCSHPIRSLELYVRMLRDSVSPSSYTY 874
Query: 127 PFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPV 186
L+K + GE + A + KFGF V +LI+ Y G + ARK+FDE+P
Sbjct: 875 SSLVKASS--FASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPE 932
Query: 187 TDVVTWNSMVI-------------------------------GYLRNGGLDNALDLFRKM 215
D + W +MV GY+ G L+ A LF +M
Sbjct: 933 RDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQM 992
Query: 216 NGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGK 275
K+IISW ++I G Q +EA+ +F++M + + PD++T+++V+SACA LG ++ GK
Sbjct: 993 PVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGK 1052
Query: 276 WVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHG 335
VH Y +NG DV IG+ALV+MY KCG +++A +F +P+K+ W ++I A HG
Sbjct: 1053 EVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHG 1112
Query: 336 LGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHY 395
+A F +ME VKPN VTFV + +AC H+GLV++GR + M Y I V HY
Sbjct: 1113 FAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHY 1172
Query: 396 ACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEP 455
MV L S+A L E++ LI +M EP+ +WGALL GC++H N+ + E L+ LEP
Sbjct: 1173 GGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEP 1232
Query: 456 HNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSE 515
N +Y L +Y + R+ IR ++E ++K PG S I I+ F+A S
Sbjct: 1233 MNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSH 1292
Query: 516 LPMKDLVLILDRLCNEM 532
++ L+LD + ++M
Sbjct: 1293 SASDEVCLLLDEIYDQM 1309
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 178/515 (34%), Positives = 274/515 (53%), Gaps = 42/515 (8%)
Query: 21 LIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKY-GSFTYATNVFHMIN 79
LI +C +LREL +I + S H D + +L+ C+ S S +YA ++F ++
Sbjct: 35 LISKCNSLRELMQIQAYAIKS---HIED-VSFVAKLINFCTESPTESSMSYARHLFEAMS 90
Query: 80 NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDG 139
PD+ ++N M R Y+ L+ ++L DGI P+ TFP L+K C
Sbjct: 91 EPDIVIFNSMARGYSRFTNP-----LEVFSLFVEILEDGILPDNYTFPSLLKACAVAKAL 145
Query: 140 ASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGY 199
G +H +K G +V+ +LIN+Y C + +AR +FD I VV +N+M
Sbjct: 146 EEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM---- 201
Query: 200 LRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIA 259
ITG + EAL LF EMQ +KP++IT+
Sbjct: 202 ---------------------------ITGYARRNRPNEALSLFREMQGKYLKPNEITLL 234
Query: 260 SVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK 319
SVLS+CA LG++D GKW+H Y +++ V + TAL++M+ KCG + A IFE+M K
Sbjct: 235 SVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK 294
Query: 320 DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCF 379
DT AW+AMI +A HG K+ F M V+P+ +TF+GLL+AC+H+G VE+GR F
Sbjct: 295 DTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYF 354
Query: 380 DVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGN 439
M + I P + HY MVDLLSRA +++ I +P+ P +W LL C H N
Sbjct: 355 SQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNN 414
Query: 440 VELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMI 499
++L EKV+ + +L+ + Y+ L ++Y + +++ +R ++K+R+ K+PGCS I
Sbjct: 415 LDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAV-KVPGCSSI 473
Query: 500 EINGVVQEFSAGGSSELPMKDLVLILDRLCNEMKI 534
E+N VV EF +G + L LD + E+K+
Sbjct: 474 EVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKL 508
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 308 bits (788), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 191/547 (34%), Positives = 291/547 (53%), Gaps = 45/547 (8%)
Query: 18 LSRLIEQC---KNLRELKRIHTQI----LTSPNLHSS--------------------DQY 50
L+ L++QC K+L++ K IH + PN S DQ
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 51 HLITRLLFS-----CSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFC 105
HL R L+S + K G A VF + D+ +N M+ YA D +
Sbjct: 109 HL--RNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYA-----QDGNLH 161
Query: 106 RAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLI 165
A+ YK+ GI N +F L+ C + H QV+ GFLS+V S+I
Sbjct: 162 EALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSII 221
Query: 166 NLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNS 225
+ Y CG + +A++ FDE+ V D+ W +++ GY + G ++ A LF +M KN +SW +
Sbjct: 222 DAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTA 281
Query: 226 IITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNG 285
+I G V+ G AL+LF +M + VKP++ T +S L A A + ++ HGK +H Y+ R
Sbjct: 282 LIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN 341
Query: 286 IECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK-DTSAWTAMISVFALHGLGWKAFDCF 344
+ + ++ ++L++MY K G ++ + +F +K D W MIS A HGLG KA
Sbjct: 342 VRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRML 401
Query: 345 LEMERAGVKPNHVTFVGLLSACAHSGLVEQG-RWCFDVMKRVYLIEPQVYHYACMVDLLS 403
+M + V+PN T V +L+AC+HSGLVE+G RW F+ M + I P HYAC++DLL
Sbjct: 402 DDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRW-FESMTVQHGIVPDQEHYACLIDLLG 460
Query: 404 RARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMN 463
RA F E + I MP EPD ++W A+LG C++HGN ELG+K A LI L+P + A Y+
Sbjct: 461 RAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYIL 520
Query: 464 LCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEF--SAGGSSELPMKDL 521
L IY G+++ +++R ++K+RRV K+ S IEI V+ F S G + +++
Sbjct: 521 LSSIYADHGKWELVEKLRGVMKKRRVNKE-KAVSWIEIEKKVEAFTVSDGSHAHARKEEI 579
Query: 522 VLILDRL 528
IL L
Sbjct: 580 YFILHNL 586
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 46/256 (17%)
Query: 238 EALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIE-CDVVIGTAL 296
+A+ + Q ++ +AS+L C ++ GKW+H +L+ G + + ++ L
Sbjct: 29 QAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHL 88
Query: 297 VNMYGKC-------------------------------GLVQQAFEIFEEMPEKDTSAWT 325
+ MY KC G++ +A +F+ MPE+D +W
Sbjct: 89 IGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWN 148
Query: 326 AMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCF------ 379
M+ +A G +A + E R+G+K N +F GLL+AC S ++ R
Sbjct: 149 TMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVA 208
Query: 380 DVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGN 439
+ V L + YA + S R FDE + D+++W L+ G G+
Sbjct: 209 GFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTV--------KDIHIWTTLISGYAKLGD 260
Query: 440 VELGEKVALHLIDLEP 455
+E EK+ + + P
Sbjct: 261 MEAAEKLFCEMPEKNP 276
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 177/534 (33%), Positives = 297/534 (55%), Gaps = 14/534 (2%)
Query: 5 SLIESKSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSK 64
S+I + + L++ L E+K+IH I+ S L S Y + + F + +
Sbjct: 123 SMIRHRVSPDRQTFLYLMKASSFLSEVKQIHCHIIVSGCL-SLGNYLWNSLVKF---YME 178
Query: 65 YGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCL 124
G+F A VF + +PD+ +N+MI YA A+ LY KM+ DGI P+
Sbjct: 179 LGNFGVAEKVFARMPHPDVSSFNVMIVGYA-----KQGFSLEALKLYFKMVSDGIEPDEY 233
Query: 125 TFPFLIKGCTRWMDGASGEIVHAQVVKFG--FLSDVFNGNSLINLYMTCGLLSNARKLFD 182
T L+ C D G+ VH + + G + S++ N+L+++Y C A++ FD
Sbjct: 234 TVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFD 293
Query: 183 EIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL-E 241
+ D+ +WN+MV+G++R G ++ A +F +M ++++SWNS++ G + G + + E
Sbjct: 294 AMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRE 353
Query: 242 LFHEMQQIS-VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
LF+EM + VKPD++T+ S++S A G + HG+WVH + R ++ D + +AL++MY
Sbjct: 354 LFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMY 413
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
KCG++++AF +F+ EKD + WT+MI+ A HG G +A F M+ GV PN+VT +
Sbjct: 414 CKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLL 473
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRA-RLFDESVILIRSMP 419
+L+AC+HSGLVE+G F+ MK + +P+ HY +VDLL RA R+ + I+ + MP
Sbjct: 474 AVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMP 533
Query: 420 MEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKR 479
M P +WG++L C+ ++E E L+ LEP Y+ L +IY GR+ + +
Sbjct: 534 MRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDK 593
Query: 480 IRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
R ++ R V+K S++ + G+ + +A + ++ IL L NEMK
Sbjct: 594 TREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK 647
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 144/604 (23%), Positives = 258/604 (42%), Gaps = 158/604 (26%)
Query: 10 KSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLI------TRLLFSCSFS 63
+SL L + L+E C + + K++ QI+ +++LI +RL+F
Sbjct: 29 QSLQLNHQSLVLLENCNSRNQFKQVLAQIM---------RFNLICDTFPMSRLIF----- 74
Query: 64 KYGSFTYATNV-------FHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLC 116
+ + TY N+ + NP++ VYN MI A + ++ C LY M+
Sbjct: 75 -FSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVS-----SSKNECFG--LYSSMIR 126
Query: 117 DGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLS-DVFNGNSLINLYMTCGLLS 175
+ P+ TF +L+K + + +H ++ G LS + NSL+ YM G
Sbjct: 127 HRVSPDRQTFLYLMKASSFLSEVKQ---IHCHIIVSGCLSLGNYLWNSLVKFYMELGNFG 183
Query: 176 NARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGL 235
A K+F +P DV ++N M++GY + G
Sbjct: 184 VAEKVFARMPHPDVSSFNVMIVGYAKQ-------------------------------GF 212
Query: 236 AKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNG--IECDVVIG 293
+ EAL+L+ +M ++PD+ T+ S+L C L I GK VH ++ R G ++++
Sbjct: 213 SLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILS 272
Query: 294 TALVNMYGKC---GLVQQAFE----------------------------IFEEMPEKDTS 322
AL++MY KC GL ++AF+ +F++MP++D
Sbjct: 273 NALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLV 332
Query: 323 AWTAMISVFALHGLGWKAF-DCFLEME-RAGVKPNHVTFVGLLSACAHSGLVEQGRWCFD 380
+W +++ ++ G + + F EM VKP+ VT V L+S A++G + GRW
Sbjct: 333 SWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHG 392
Query: 381 VMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGN- 439
++ R+ L + + + ++D+ + + + + ++ ++ E DV +W +++ G HGN
Sbjct: 393 LVIRLQL-KGDAFLSSALIDMYCKCGIIERAFMVFKT-ATEKDVALWTSMITGLAFHGNG 450
Query: 440 ----------------------------------VELGEKVALHLID---LEPHNHAFYM 462
VE G V H+ D +P Y
Sbjct: 451 QQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETE-HYG 509
Query: 463 NLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGG----SSELPM 518
+L D+ +AGR + AK I VQKK+P + G + GG ++EL +
Sbjct: 510 SLVDLLCRAGRVEEAKDI--------VQKKMPMRPSQSMWGSILSACRGGEDIETAELAL 561
Query: 519 KDLV 522
+L+
Sbjct: 562 TELL 565
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 305 bits (781), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 180/503 (35%), Positives = 285/503 (56%), Gaps = 50/503 (9%)
Query: 23 EQCKNLRELKRIHTQILTSPNLHSSDQY--HLITRLLFSCSFSKYGSFTYATNVFHMINN 80
++C ++++K H+ + LH + L+T L + +K+ F YA+++F I
Sbjct: 19 QRCNTVKQIKSTHSLFIIH-GLHRNTYAISKLLTAFLHLPNLNKH--FHYASSIFDSIEI 75
Query: 81 PDLRVYNIMIR--AYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMD 138
P+ VY+ MIR + + + R+F +L K + I P+ LTF FLI C +
Sbjct: 76 PNSFVYDTMIRICSRSSQPHLGLRYF----LLMVKEEEEDITPSYLTFHFLIVACLKACF 131
Query: 139 GASGEIVHAQVVKFG-FLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVI 197
+ G+ +H VVK G FLSD ++ +Y+ LL +ARK+FDEIP DVV
Sbjct: 132 FSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVV------- 184
Query: 198 GYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKIT 257
W+ ++ G V+ GL E LE+F EM ++PD+ +
Sbjct: 185 ------------------------KWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFS 220
Query: 258 IASVLSACAQLGAIDHGKWVHSYLRRNG-IECDVVIGTALVNMYGKCGLVQQAFEIFEEM 316
+ + L+ACAQ+GA+ GKW+H ++++ IE DV +GTALV+MY KCG ++ A E+FE++
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL 280
Query: 317 PEKDTSAWTAMISVFALHGLGWKAFDCFLEMERA-GVKPNHVTFVGLLSACAHSGLVEQG 375
++ +W A+I +A +G KA C +ER G+KP+ V +G+L+ACAH G +E+G
Sbjct: 281 TRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Query: 376 RWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQ 435
R + M+ Y I P+ HY+C+VDL+ RA D+++ LI MPM+P VWGALL GC+
Sbjct: 341 RTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCR 400
Query: 436 MHGNVELGEKVALHLIDLEPHN----HAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQK 491
H NVELGE +L+DLE N A + L +IY R A ++R ++++R + +
Sbjct: 401 THKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGI-R 459
Query: 492 KIPGCSMIEINGVVQEFSAGGSS 514
K PG S++E++G+V +F +G S
Sbjct: 460 KTPGWSLLEVDGIVTKFVSGDVS 482
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 305 bits (781), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 180/503 (35%), Positives = 284/503 (56%), Gaps = 50/503 (9%)
Query: 23 EQCKNLRELKRIHTQILTSPNLHSSDQY--HLITRLLFSCSFSKYGSFTYATNVFHMINN 80
++C ++++K H+ + LH + L+T L + +K+ F YA+++F I
Sbjct: 19 QRCNTVKQIKSTHSLFIIH-GLHRNTYAISKLLTAFLHLPNLNKH--FHYASSIFDSIEI 75
Query: 81 PDLRVYNIMIR--AYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMD 138
P+ VY+ MIR + + + R+F +L K + I P+ LTF FLI C +
Sbjct: 76 PNSFVYDTMIRICSRSSQPHLGLRYF----LLMVKEEEEDIAPSYLTFHFLIVACLKACF 131
Query: 139 GASGEIVHAQVVKFG-FLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVI 197
+ G+ +H VVK G FLSD ++ +Y+ LL +ARK+FDEIP DVV
Sbjct: 132 FSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVV------- 184
Query: 198 GYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKIT 257
W+ ++ G V+ GL E LE+F EM ++PD+ +
Sbjct: 185 ------------------------KWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFS 220
Query: 258 IASVLSACAQLGAIDHGKWVHSYLRRNG-IECDVVIGTALVNMYGKCGLVQQAFEIFEEM 316
+ + L+ACAQ+GA+ GKW+H ++++ IE DV +GTALV+MY KCG ++ A E+F+++
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL 280
Query: 317 PEKDTSAWTAMISVFALHGLGWKAFDCFLEMERA-GVKPNHVTFVGLLSACAHSGLVEQG 375
++ +W A+I +A +G KA C +ER G+KP+ V +G+L+ACAH G +E+G
Sbjct: 281 TRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Query: 376 RWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQ 435
R + M+ Y I P+ HY+C+VDL+ RA D+++ LI MPM+P VWGALL GC+
Sbjct: 341 RSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCR 400
Query: 436 MHGNVELGEKVALHLIDLEPHN----HAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQK 491
H NVELGE +L+DLE N A + L +IY R A ++R ++++R V +
Sbjct: 401 THKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGV-R 459
Query: 492 KIPGCSMIEINGVVQEFSAGGSS 514
K PG S++E++G V +F +G S
Sbjct: 460 KTPGWSVLEVDGNVTKFVSGDVS 482
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 182/568 (32%), Positives = 285/568 (50%), Gaps = 84/568 (14%)
Query: 19 SRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMI 78
+ LI+ + +LK+IH ++L L LIT+L+ + S +G T+A VF +
Sbjct: 25 ASLIDSATHKAQLKQIHARLLV---LGLQFSGFLITKLIHASS--SFGDITFARQVFDDL 79
Query: 79 NNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMD 138
P + +N +IR Y+ + HF A+++Y M + P+ TFP L+K C+
Sbjct: 80 PRPQIFPWNAIIRGYS-----RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSH 134
Query: 139 GASGEIVH----------------------AQVVKFGFLSDVFNG-----------NSLI 165
G VH A+ + G VF G +++
Sbjct: 135 LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIV 194
Query: 166 NLYMTCGLLSNARKLFDEIPVTDVVT-WNSMV---------------------------- 196
+ Y G A ++F ++ DV W ++V
Sbjct: 195 SAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE 254
Query: 197 ----------IGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEM 246
Y + G + A LF KM N+I WN++I+G + G A+EA+++FHEM
Sbjct: 255 IEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM 314
Query: 247 QQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLV 306
V+PD I+I S +SACAQ+G+++ + ++ Y+ R+ DV I +AL++M+ KCG V
Sbjct: 315 INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSV 374
Query: 307 QQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSAC 366
+ A +F+ ++D W+AMI + LHG +A + MER GV PN VTF+GLL AC
Sbjct: 375 EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMAC 434
Query: 367 AHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYV 426
HSG+V +G W F+ M + I PQ HYAC++DLL RA D++ +I+ MP++P V V
Sbjct: 435 NHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTV 493
Query: 427 WGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKE 486
WGALL C+ H +VELGE A L ++P N Y+ L ++Y A +D +R +KE
Sbjct: 494 WGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKE 553
Query: 487 RRVQKKIPGCSMIEINGVVQEFSAGGSS 514
+ + K + GCS +E+ G ++ F G S
Sbjct: 554 KGLNKDV-GCSWVEVRGRLEAFRVGDKS 580
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 302 bits (773), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 169/475 (35%), Positives = 269/475 (56%), Gaps = 44/475 (9%)
Query: 51 HLITRLLFSCSFSKYGSFTYATNVFHMINNP-DLRVYNIMIRAYAGMDGVDDRHFCRAMV 109
HLI L+ S +YA VF I P ++ ++N +IR YA + + A
Sbjct: 55 HLIFYLV---SLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIG-----NSISAFS 106
Query: 110 LYKKMLCDGIF-PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLY 168
LY++M G+ P+ T+PFLIK T D GE +H+ V++ GF S ++ NSL++LY
Sbjct: 107 LYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLY 166
Query: 169 MTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIIT 228
CG +++A K+FD KM K++++WNS+I
Sbjct: 167 ANCGDVASAYKVFD-------------------------------KMPEKDLVAWNSVIN 195
Query: 229 GLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIEC 288
G + G +EAL L+ EM +KPD TI S+LSACA++GA+ GK VH Y+ + G+
Sbjct: 196 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 255
Query: 289 DVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEME 348
++ L+++Y +CG V++A +F+EM +K++ +WT++I A++G G +A + F ME
Sbjct: 256 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 315
Query: 349 RA-GVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARL 407
G+ P +TFVG+L AC+H G+V++G F M+ Y IEP++ H+ CMVDLL+RA
Sbjct: 316 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 375
Query: 408 FDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDI 467
++ I+SMPM+P+V +W LLG C +HG+ +L E + ++ LEP++ Y+ L ++
Sbjct: 376 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNM 435
Query: 468 YGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLV 522
Y R+ ++IR + V KK+PG S++E+ V EF G S P D +
Sbjct: 436 YASEQRWSDVQKIRKQMLRDGV-KKVPGHSLVEVGNRVHEFLMGDKSH-PQSDAI 488
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 257/428 (60%), Gaps = 5/428 (1%)
Query: 111 YKKMLCDGIFPNCLTFPFLIKGCTRWMDG--ASGEIVHAQVVKFGF-LSDVFNGNSLINL 167
+ M G+ PN +TF L+ GC + G A G+++H K G + V G ++I +
Sbjct: 59 FSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGM 118
Query: 168 YMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSII 227
Y G AR +FD + + VTWN+M+ GY+R+G +DNA +F KM +++ISW ++I
Sbjct: 119 YSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMI 178
Query: 228 TGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIE 287
G V+ G +EAL F EMQ VKPD + I + L+AC LGA+ G WVH Y+ +
Sbjct: 179 NGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFK 238
Query: 288 CDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEM 347
+V + +L+++Y +CG V+ A ++F M ++ +W ++I FA +G ++ F +M
Sbjct: 239 NNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM 298
Query: 348 ERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARL 407
+ G KP+ VTF G L+AC+H GLVE+G F +MK Y I P++ HY C+VDL SRA
Sbjct: 299 QEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGR 358
Query: 408 FDESVILIRSMPMEPDVYVWGALLGGCQMHG-NVELGEKVALHLIDLEPHNHAFYMNLCD 466
++++ L++SMPM+P+ V G+LL C HG N+ L E++ HL DL +H+ Y+ L +
Sbjct: 359 LEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSN 418
Query: 467 IYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILD 526
+Y G+++ A ++R +K ++K+ PG S IEI+ + F AG ++ + + +L+
Sbjct: 419 MYAADGKWEGASKMRRKMKGLGLKKQ-PGFSSIEIDDCMHVFMAGDNAHVETTYIREVLE 477
Query: 527 RLCNEMKI 534
+ +++++
Sbjct: 478 LISSDLRL 485
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 140/333 (42%), Gaps = 71/333 (21%)
Query: 218 KNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQL--GAIDHGK 275
+ +SW S I L + G EA + F +M V+P+ IT ++LS C G+ G
Sbjct: 34 ETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGD 93
Query: 276 WVHSYLRRNGIECD-VVIGTALVNMYGK-------------------------------C 303
+H Y + G++ + V++GTA++ MY K
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 304 GLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLL 363
G V A ++F++MPE+D +WTAMI+ F G +A F EM+ +GVKP++V + L
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 364 SACAHSGLVEQGRW----------------------------CFDVMKRVY--LIEPQVY 393
+AC + G + G W C + ++V+ + + V
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV 273
Query: 394 HYACMVDLLSRARLFDESVILIRSMP---MEPDVYVWGALLGGCQMHGNVELGEKVALHL 450
+ ++ + ES++ R M +PD + L C G VE G + +
Sbjct: 274 SWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIM 333
Query: 451 ---IDLEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
+ P Y L D+Y +AGR + A ++
Sbjct: 334 KCDYRISPRIE-HYGCLVDLYSRAGRLEDALKL 365
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 140/356 (39%), Gaps = 104/356 (29%)
Query: 48 DQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDD--RHFC 105
D+ H++ +SK G F A VF + + + +N MI Y VD+ + F
Sbjct: 105 DRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFD 164
Query: 106 R------------------------AMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGAS 141
+ A++ +++M G+ P+ + + CT +
Sbjct: 165 KMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSF 224
Query: 142 GEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLR 201
G VH V+ F ++V NSLI+LY CG + AR++F + VV+WNS+++G+
Sbjct: 225 GLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAA 284
Query: 202 NGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASV 261
NG A E+L F +MQ+ KPD +T
Sbjct: 285 NGN-------------------------------AHESLVYFRKMQEKGFKPDAVTFTGA 313
Query: 262 LSACAQLGAIDHGKWVHSYLRRNGI-ECDVVIGT------ALVNMYGKCGLVQQAFEIFE 314
L+AC+ +G ++ G LR I +CD I LV++Y + G ++ A ++ +
Sbjct: 314 LTACSHVGLVEEG------LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQ 367
Query: 315 EMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSG 370
MP +KPN V LL+AC++ G
Sbjct: 368 SMP----------------------------------MKPNEVVIGSLLAACSNHG 389
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 299 bits (765), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 190/589 (32%), Positives = 295/589 (50%), Gaps = 79/589 (13%)
Query: 18 LSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHM 77
L L++ + LK+IH +LTSP ++ L +RLL C + F YA +
Sbjct: 4 LKTLLDLPLHFLHLKQIHCLLLTSPIFYTRRDLFL-SRLLRRCC-TAATQFRYARRLLCQ 61
Query: 78 INNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWM 137
+ +++++ +I ++G ++ R + + Y+ M +G+ P+ TFP L+K +
Sbjct: 62 LQTLSIQLWDSLIGHFSGGITLNRR---LSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLR 118
Query: 138 DGASGEIVHAQVVKFG----------------------FLSDVFNG---------NSLIN 166
D + HA +VKFG F S +F+G ++I+
Sbjct: 119 DSNPFQF-HAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMID 177
Query: 167 LYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGG---------------------- 204
++ G S A F E+ T V V+ L+ G
Sbjct: 178 GFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVK 237
Query: 205 ------------------LDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEM 246
D+A +F +M +N+++W ++I G VQ + + +F EM
Sbjct: 238 CDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEM 297
Query: 247 QQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLV 306
+ V P++ T++SVLSACA +GA+ G+ VH Y+ +N IE + GT L+++Y KCG +
Sbjct: 298 LKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCL 357
Query: 307 QQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSAC 366
++A +FE + EK+ WTAMI+ FA HG AFD F M + V PN VTF+ +LSAC
Sbjct: 358 EEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSAC 417
Query: 367 AHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYV 426
AH GLVE+GR F MK + +EP+ HYACMVDL R L +E+ LI MPMEP V
Sbjct: 418 AHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVV 477
Query: 427 WGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKE 486
WGAL G C +H + ELG+ A +I L+P + Y L ++Y ++ +D R+R +K+
Sbjct: 478 WGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKD 537
Query: 487 RRVQKKIPGCSMIEINGVVQEFSA-GGSSELPMKDLVLILDRLCNEMKI 534
++V K PG S IE+ G + EF A L DL LD + +M++
Sbjct: 538 QQVVKS-PGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMRL 585
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 297 bits (760), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 161/454 (35%), Positives = 257/454 (56%), Gaps = 11/454 (2%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
++ G VF + D+ +N +I +Y G + F A+ ++K+M +
Sbjct: 91 YASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG-----NGRFEDAIGVFKRMSQESNLK 145
Query: 122 -NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
+ T + C+ + GE ++ VV F V GN+L++++ CG L AR +
Sbjct: 146 FDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVRIGNALVDMFCKCGCLDKARAV 204
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
FD + +V W SMV GY+ G +D A LF + K+++ W +++ G VQ EAL
Sbjct: 205 FDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEAL 264
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
ELF MQ ++PD + S+L+ CAQ GA++ GKW+H Y+ N + D V+GTALV+MY
Sbjct: 265 ELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMY 324
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
KCG ++ A E+F E+ E+DT++WT++I A++G+ +A D + EME GV+ + +TFV
Sbjct: 325 AKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFV 384
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
+L+AC H G V +GR F M + ++P+ H +C++DLL RA L DE+ LI M
Sbjct: 385 AVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRG 444
Query: 421 EPD---VYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAA 477
E D V V+ +LL + +GNV++ E+VA L +E + + + L +Y A R++
Sbjct: 445 ESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDV 504
Query: 478 KRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAG 511
+R +K+ + +K PGCS IEI+GV EF G
Sbjct: 505 TNVRRKMKDLGI-RKFPGCSSIEIDGVGHEFIVG 537
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 189/393 (48%), Gaps = 69/393 (17%)
Query: 77 MINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRW 136
++ P L +YN M+++ A D + F + + L+ ++ G++P+ T P ++K R
Sbjct: 5 LLQTPSLLMYNKMLKSLA-----DGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRL 59
Query: 137 MDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMV 196
GE VH VK G D + NSL+ +Y + G + K+FDE+P DVV+WN ++
Sbjct: 60 RKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLI 119
Query: 197 IGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKI 256
Y+ NG ++A+ +F++M+ Q+ ++K D+
Sbjct: 120 SSYVGNGRFEDAIGVFKRMS------------------------------QESNLKFDEG 149
Query: 257 TIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEM 316
TI S LSAC+ L ++ G+ ++ ++ E V IG ALV+M+ KCG + +A +F+ M
Sbjct: 150 TIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSM 208
Query: 317 PEKDTSAWTAMISVFALHG-----------------LGWKA----------FDCFLE--- 346
+K+ WT+M+ + G + W A FD LE
Sbjct: 209 RDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFR 268
Query: 347 -MERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRA 405
M+ AG++P++ V LL+ CA +G +EQG+W + + +V A +VD+ ++
Sbjct: 269 CMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTA-LVDMYAKC 327
Query: 406 RLFDESVILIRSMPMEPDVYVWGALLGGCQMHG 438
+ ++ + + E D W +L+ G M+G
Sbjct: 328 GCIETALEVFYEIK-ERDTASWTSLIYGLAMNG 359
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 296 bits (758), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/522 (32%), Positives = 278/522 (53%), Gaps = 48/522 (9%)
Query: 17 ALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLL-FSCSFSKYGSFTYATNVF 75
A ++ +++L+++H ++ + S L+T+L+ +CS + Y +F
Sbjct: 11 AYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRS---LLTKLITLACSAR---AIAYTHLLF 64
Query: 76 HMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTR 135
+ PD ++N +I++ + + R + Y++ML + P+ TF +IK C
Sbjct: 65 LSVPLPDDFLFNSVIKSTSKL-----RLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCAD 119
Query: 136 WMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSM 195
G+ VH V GF D + +L+ Y CG + AR++
Sbjct: 120 LSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQV--------------- 164
Query: 196 VIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDK 255
F +M K+I++WNS+++G Q GLA EA+++F++M++ +PD
Sbjct: 165 ----------------FDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDS 208
Query: 256 ITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEE 315
T S+LSACAQ GA+ G WVH Y+ G++ +V +GTAL+N+Y +CG V +A E+F++
Sbjct: 209 ATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDK 268
Query: 316 MPEKDTSAWTAMISVFALHGLGWKAFDCFLEME-RAGVKPNHVTFVGLLSACAHSGLVEQ 374
M E + +AWTAMIS + HG G +A + F +ME G PN+VTFV +LSACAH+GLVE+
Sbjct: 269 MKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEE 328
Query: 375 GRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVY---VWGALL 431
GR + M + Y + P V H+ CMVD+L RA DE+ I + +W A+L
Sbjct: 329 GRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAML 388
Query: 432 GGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQK 491
G C+MH N +LG ++A LI LEP N ++ L +IY +G+ D IR+ + ++K
Sbjct: 389 GACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRK 448
Query: 492 KIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
++ G S+IE+ FS G S ++ L+ L + K
Sbjct: 449 QV-GYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCK 489
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 296 bits (757), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 170/452 (37%), Positives = 251/452 (55%), Gaps = 39/452 (8%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
++ G A +F I D+ +N MI YA + ++ A+ L+K M+ + P
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYA-----ETGNYKEALELFKDMMKTNVRP 264
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ T ++ C + G VH + GF S++ N+LI+LY CG
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG--------- 315
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
L+ A LF ++ K++ISWN++I G L KEAL
Sbjct: 316 ----------------------ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALL 353
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYL--RRNGIECDVVIGTALVNM 299
LF EM + P+ +T+ S+L ACA LGAID G+W+H Y+ R G+ + T+L++M
Sbjct: 354 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 413
Query: 300 YGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
Y KCG ++ A ++F + K S+W AMI FA+HG +FD F M + G++P+ +TF
Sbjct: 414 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITF 473
Query: 360 VGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP 419
VGLLSAC+HSG+++ GR F M + Y + P++ HY CM+DLL + LF E+ +I M
Sbjct: 474 VGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMME 533
Query: 420 MEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKR 479
MEPD +W +LL C+MHGNVELGE A +LI +EP N Y+ L +IY AGR++ +
Sbjct: 534 MEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAK 593
Query: 480 IRNLLKERRVQKKIPGCSMIEINGVVQEFSAG 511
R LL ++ + KK+PGCS IEI+ VV EF G
Sbjct: 594 TRALLNDKGM-KKVPGCSSIEIDSVVHEFIIG 624
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/491 (31%), Positives = 273/491 (55%), Gaps = 20/491 (4%)
Query: 21 LIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSK-YGSFTYATNVFHMIN 79
L+ CK L+ L+ IH Q++ LH+++ + +++L+ C S + YA +VF I
Sbjct: 39 LLHNCKTLQSLRIIHAQMIKI-GLHNTN--YALSKLIEFCILSPHFEGLPYAISVFKTIQ 95
Query: 80 NPDLRVYNIMIRAYA-GMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMD 138
P+L ++N M R +A D V A+ LY M+ G+ PN TFPF++K C +
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVS------ALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 149
Query: 139 GASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIG 198
G+ +H V+K G D++ SLI++Y+ G L +A K+FD+ P DVV++ +++ G
Sbjct: 150 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 199 YLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITI 258
Y G ++NA LF ++ K+++SWN++I+G + G KEALELF +M + +V+PD+ T+
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 259 ASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPE 318
+V+SACAQ G+I+ G+ VH ++ +G ++ I AL+++Y KCG ++ A +FE +P
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 319 KDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWC 378
KD +W +I + L +A F EM R+G PN VT + +L ACAH G ++ GRW
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 379 -FDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMH 437
+ KR+ + ++D+ ++ + + + S+ + + W A++ G MH
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMH 448
Query: 438 GNVELGEKV--ALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRI-RNLLKERRVQKKIP 494
G + + + I ++P + F + L +G D + I R + ++ ++ K+
Sbjct: 449 GRADASFDLFSRMRKIGIQPDDITF-VGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLE 507
Query: 495 --GCSMIEING 503
GC MI++ G
Sbjct: 508 HYGC-MIDLLG 517
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/450 (36%), Positives = 258/450 (57%), Gaps = 16/450 (3%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKM--LCDGI 119
+ K G + +F + D YN MI Y C +V +++ L
Sbjct: 166 YLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVK---------CGLIVSARELFDLMPME 216
Query: 120 FPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARK 179
N +++ +I G + DG + +++ D+ + NS+I+ Y+ G + +A+
Sbjct: 217 MKNLISWNSMISGYAQTSDGVD---IASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKG 273
Query: 180 LFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEA 239
LFD +P DVVTW +M+ GY + G + +A LF +M ++++++NS++ G VQ EA
Sbjct: 274 LFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEA 333
Query: 240 LELFHEMQQIS-VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVN 298
LE+F +M++ S + PD T+ VL A AQLG + +H Y+ +G AL++
Sbjct: 334 LEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALID 393
Query: 299 MYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVT 358
MY KCG +Q A +FE + K W AMI A+HGLG AFD L++ER +KP+ +T
Sbjct: 394 MYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDIT 453
Query: 359 FVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSM 418
FVG+L+AC+HSGLV++G CF++M+R + IEP++ HY CMVD+LSR+ + + LI M
Sbjct: 454 FVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEM 513
Query: 419 PMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAK 478
P+EP+ +W L C H E GE VA HLI +N + Y+ L ++Y G + +
Sbjct: 514 PVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVR 573
Query: 479 RIRNLLKERRVQKKIPGCSMIEINGVVQEF 508
R+R ++KER+++ KIPGCS IE++G V EF
Sbjct: 574 RVRTMMKERKIE-KIPGCSWIELDGRVHEF 602
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 228/450 (50%), Gaps = 46/450 (10%)
Query: 24 QCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFT-YATNVFHM----- 77
CK ++ +IH +++ + + +S+ L TR++ + + S+ +A VFH
Sbjct: 21 SCKTSDDVNQIHGRLIKTGIIKNSN---LTTRIVLAFASSRRPYLADFARCVFHEYHVCS 77
Query: 78 -----INNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKG 132
+ +P L +N +I++++ G D R +A++L ML +G+ + + ++K
Sbjct: 78 FSFGEVEDPFL--WNAVIKSHS--HGKDPR---QALLLLCLMLENGVSVDKFSLSLVLKA 130
Query: 133 CTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTW 192
C+R G +H + K G SD+F N LI LY+ CG L +R++FD +P D V++
Sbjct: 131 CSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSY 190
Query: 193 NSMVIGYLRNGGLDNALDLFR--KMNGKNIISWNSIITGLVQGGLAKE-ALELFHEMQQI 249
NSM+ GY++ G + +A +LF M KN+ISWNS+I+G Q + A +LF +M +
Sbjct: 191 NSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPE- 249
Query: 250 SVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQA 309
D I+ S++ + G I+ K + + R DVV +++ Y K G V A
Sbjct: 250 ---KDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR----DVVTWATMIDGYAKLGFVHHA 302
Query: 310 FEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMER-AGVKPNHVTFVGLLSACAH 368
+F++MP +D A+ +M++ + + +A + F +ME+ + + P+ T V +L A A
Sbjct: 303 KTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIA- 361
Query: 369 SGLVEQGRWCFDVMKRVYLIEPQVYHYA----CMVDLLSRARLFDESVILIRSMPMEPDV 424
+ GR + +Y++E Q Y ++D+ S+ ++++ + +
Sbjct: 362 ----QLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIE-NKSI 416
Query: 425 YVWGALLGGCQMHGNVELGEKVALHLIDLE 454
W A++GG +HG LGE L+ +E
Sbjct: 417 DHWNAMIGGLAIHG---LGESAFDMLLQIE 443
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 293 bits (751), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/498 (33%), Positives = 280/498 (56%), Gaps = 22/498 (4%)
Query: 12 LTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFT-- 69
+ ++ L RL+ L IH +L LH S+ LL + S GS +
Sbjct: 1 MEIERKLLRLLHGHNTRTRLPEIHAHLLRHF-LHGSN-------LLLAHFISICGSLSNS 52
Query: 70 -YATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPF 128
YA VF I NP++ V+N MI+ Y+ + ++ + M GI+ + T+
Sbjct: 53 DYANRVFSHIQNPNVLVFNAMIKCYSLVGPP-----LESLSFFSSMKSRGIWADEYTYAP 107
Query: 129 LIKGCTRWMDGASGEIVHAQVVKFGF--LSDVFNGNSLINLYMTCGLLSNARKLFDEIPV 186
L+K C+ D G+ VH ++++ GF L + G ++ LY + G + +A+K+FDE+
Sbjct: 108 LLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIG--VVELYTSGGRMGDAQKVFDEMSE 165
Query: 187 TDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEM 246
+VV WN M+ G+ +G ++ L LF++M+ ++I+SWNS+I+ L + G +EALELF EM
Sbjct: 166 RNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEM 225
Query: 247 QQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECD-VVIGTALVNMYGKCGL 305
PD+ T+ +VL A LG +D GKW+HS +G+ D + +G ALV+ Y K G
Sbjct: 226 IDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGD 285
Query: 306 VQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEM-ERAGVKPNHVTFVGLLS 364
++ A IF +M ++ +W +IS A++G G D F M E V PN TF+G+L+
Sbjct: 286 LEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLA 345
Query: 365 ACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDV 424
C+++G VE+G F +M + +E + HY MVDL+SR+ E+ +++MP+ +
Sbjct: 346 CCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANA 405
Query: 425 YVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLL 484
+WG+LL C+ HG+V+L E A+ L+ +EP N Y+ L ++Y + GR+ +++R L+
Sbjct: 406 AMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLM 465
Query: 485 KERRVQKKIPGCSMIEIN 502
K+ R++K ++ +++
Sbjct: 466 KKNRLRKSTGQSTICDVS 483
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 293 bits (751), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/470 (35%), Positives = 261/470 (55%), Gaps = 42/470 (8%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYA--GMDGVDDRHFCRAMVLYKKMLCDGI 119
+SK G A VF +++ + Y MI YA G+ G A+ L+++M +GI
Sbjct: 341 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAG-------EAVKLFEEMEEEGI 393
Query: 120 FPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARK 179
P+ T ++ C R+ G+ VH + + D+F N+L+++Y CG + A
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 180 LFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEA 239
+ F +M K+IISWN+II G + A EA
Sbjct: 454 V-------------------------------FSEMRVKDIISWNTIIGGYSKNCYANEA 482
Query: 240 LELFHEM-QQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVN 298
L LF+ + ++ PD+ T+A VL ACA L A D G+ +H Y+ RNG D + +LV+
Sbjct: 483 LSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVD 542
Query: 299 MYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVT 358
MY KCG + A +F+++ KD +WT MI+ + +HG G +A F +M +AG++ + ++
Sbjct: 543 MYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS 602
Query: 359 FVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSM 418
FV LL AC+HSGLV++G F++M+ IEP V HYAC+VD+L+R ++ I +M
Sbjct: 603 FVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENM 662
Query: 419 PMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAK 478
P+ PD +WGALL GC++H +V+L EKVA + +LEP N +Y+ + +IY +A +++ K
Sbjct: 663 PIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVK 722
Query: 479 RIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRL 528
R+R + +R ++K PGCS IEI G V F AG SS +++ L ++
Sbjct: 723 RLRKRIGQRGLRKN-PGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKV 771
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 196/454 (43%), Gaps = 90/454 (19%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
++ G A+ VF + +NI++ A F ++ L+KKM+ G+
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELA-----KSGDFSGSIGLFKKMMSSGVEM 193
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGF--------------------------- 154
+ TF + K + GE +H ++K GF
Sbjct: 194 DSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVF 253
Query: 155 ----LSDVFNGNSLINLYMTCGLLSNARKLFDEIPVT----DVVTWNSMVIG-------- 198
DV + NS+IN Y++ GL +F ++ V+ D+ T S+ G
Sbjct: 254 DEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLIS 313
Query: 199 ---------------------------YLRNGGLDNALDLFRKMNGKNIISWNSIITGLV 231
Y + G LD+A +FR+M+ ++++S+ S+I G
Sbjct: 314 LGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYA 373
Query: 232 QGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVV 291
+ GLA EA++LF EM++ + PD T+ +VL+ CA+ +D GK VH +++ N + D+
Sbjct: 374 REGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIF 433
Query: 292 IGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCF-LEMERA 350
+ AL++MY KCG +Q+A +F EM KD +W +I ++ + +A F L +E
Sbjct: 434 VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK 493
Query: 351 GVKPNHVTFVGLLSACAHSGLVEQGRWCFD-VMKRVYLIEPQVYH-----YACMVDLLSR 404
P+ T +L ACA ++GR +M+ Y + V + YA LL
Sbjct: 494 RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLA 553
Query: 405 ARLFDESVILIRSMPMEPDVYVWGALLGGCQMHG 438
LFD+ D+ W ++ G MHG
Sbjct: 554 HMLFDDIA--------SKDLVSWTVMIAGYGMHG 579
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 162/381 (42%), Gaps = 68/381 (17%)
Query: 153 GFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLF 212
GF+ D G+ L +Y CG L A ++FDE+ +
Sbjct: 124 GFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKI-------------------------- 157
Query: 213 RKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAID 272
+ + WN ++ L + G ++ LF +M V+ D T + V + + L ++
Sbjct: 158 -----EKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 273 HGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFA 332
G+ +H ++ ++G +G +LV Y K V A ++F+EM E+D +W ++I+ +
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 333 LHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGR--------WCF----- 379
+GL K F++M +G++ + T V + + CA S L+ GR CF
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 380 ---------------DVMKRVY--LIEPQVYHYACMVDLLSRARLFDESVILIRSMPME- 421
D K V+ + + V Y M+ +R L E+V L M E
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 422 --PDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMN-LCDIYGKAGRFDAAK 478
PDVY A+L C + ++ G++V + + + F N L D+Y K G A+
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 479 RIRNLLKERRVQKKIPGCSMI 499
+ E RV+ I ++I
Sbjct: 453 LV---FSEMRVKDIISWNTII 470
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 133/335 (39%), Gaps = 45/335 (13%)
Query: 218 KNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWV 277
+++ N+ + + G + A++L + + P T+ SVL CA ++ GK V
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEV 116
Query: 278 HSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLG 337
+++R NG D +G+ L MY CG +++A +F+E+ + W +++ A G
Sbjct: 117 DNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDF 176
Query: 338 WKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYAC 397
+ F +M +GV+ + TF + + + V G + + E +
Sbjct: 177 SGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSL 236
Query: 398 MVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKV----------- 446
+ L R+ +S + E DV W +++ G +G E G V
Sbjct: 237 VAFYLKNQRV--DSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI 294
Query: 447 ----------------------ALHLIDLEP---HNHAFYMNLCDIYGKAGRFDAAKRIR 481
A+H I ++ F L D+Y K G D+AK +
Sbjct: 295 DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 354
Query: 482 NLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSEL 516
+ +R V + SMI G +E AG + +L
Sbjct: 355 REMSDRSV---VSYTSMIA--GYAREGLAGEAVKL 384
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 186/561 (33%), Positives = 285/561 (50%), Gaps = 83/561 (14%)
Query: 12 LTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYH-LITRLLFSCSFSKYGSFTY 70
L K+ L LI +C +LR K+I TQ++T L + ++T L S F+ Y S
Sbjct: 3 LPEKSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSV-- 60
Query: 71 ATNVFHMINNP-DLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFL 129
+ H I + YN ++ +YA D F YK + +G P+ TFP +
Sbjct: 61 ---ILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFA-----YKTFVSNGFSPDMFTFPPV 112
Query: 130 IKGCTRWMDGASGEIVHAQVVKFGF-------------------------------LSDV 158
K C ++ G+ +H V K GF + DV
Sbjct: 113 FKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDV 172
Query: 159 FNGNSLINLYMTCGLLSNARKLFDEIPVT------------------------------- 187
+ +I + GL A F ++ V
Sbjct: 173 VSWTGIITGFTRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILK 232
Query: 188 -----DVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALEL 242
+ T N+++ Y++ L +A+ +F ++ K+ +SWNS+I+GLV +KEA++L
Sbjct: 233 RASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDL 292
Query: 243 FHEMQQIS-VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
F MQ S +KPD + SVLSACA LGA+DHG+WVH Y+ GI+ D IGTA+V+MY
Sbjct: 293 FSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYA 352
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KCG ++ A EIF + K+ W A++ A+HG G ++ F EM + G KPN VTF+
Sbjct: 353 KCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLA 412
Query: 362 LLSACAHSGLVEQGRWCFDVMK-RVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
L+AC H+GLV++GR F MK R Y + P++ HY CM+DLL RA L DE++ L+++MP+
Sbjct: 413 ALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPV 472
Query: 421 EPDVYVWGALLGGCQMHGNV-ELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKR 479
+PDV + GA+L C+ G + EL +++ +D+E + Y+ L +I+ R+D R
Sbjct: 473 KPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVAR 532
Query: 480 IRNLLKERRVQKKIPGCSMIE 500
IR L+K + + K+PG S IE
Sbjct: 533 IRRLMKVKGIS-KVPGSSYIE 552
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 163/473 (34%), Positives = 253/473 (53%), Gaps = 39/473 (8%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
++K GS A +F + ++ +N MI AY V + + AM++++KML +G+ P
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAY-----VQNENPKEAMLIFQKMLDEGVKP 335
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
++ + C D G +H V+ G +V NSLI++Y C
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCK--------- 386
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
+D A +F K+ + ++SWN++I G Q G +AL
Sbjct: 387 ----------------------EVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALN 424
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
F +M+ +VKPD T SV++A A+L H KW+H + R+ ++ +V + TALV+MY
Sbjct: 425 YFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYA 484
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KCG + A IF+ M E+ + W AMI + HG G A + F EM++ +KPN VTF+
Sbjct: 485 KCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLS 544
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME 421
++SAC+HSGLVE G CF +MK Y IE + HY MVDLL RA +E+ I MP++
Sbjct: 545 VISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVK 604
Query: 422 PDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIR 481
P V V+GA+LG CQ+H NV EK A L +L P + +++ L +IY A ++ ++R
Sbjct: 605 PAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVR 664
Query: 482 -NLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
++L R+ +K PGCSM+EI V F +G ++ K + L++L +K
Sbjct: 665 VSML--RQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIK 715
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 184/357 (51%), Gaps = 41/357 (11%)
Query: 21 LIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINN 80
L+E+C +L+EL+ QIL + Q H L S F +YGS A VF I++
Sbjct: 43 LLERCSSLKELR----QILPLVFKNGLYQEHFFQTKLVSL-FCRYGSVDEAARVFEPIDS 97
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGA 140
+Y+ M++ +A + +D +A+ + +M D + P F +L+K C +
Sbjct: 98 KLNVLYHTMLKGFAKVSDLD-----KALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELR 152
Query: 141 SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYL 200
G+ +H +VK GF D+F L N+Y C ++ ARK+FD +P D+V+WN++V GY
Sbjct: 153 VGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYS 212
Query: 201 RNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIAS 260
+N G+A+ ALE+ M + ++KP ITI S
Sbjct: 213 QN-------------------------------GMARMALEMVKSMCEENLKPSFITIVS 241
Query: 261 VLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKD 320
VL A + L I GK +H Y R+G + V I TALV+MY KCG ++ A ++F+ M E++
Sbjct: 242 VLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERN 301
Query: 321 TSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRW 377
+W +MI + + +A F +M GVKP V+ +G L ACA G +E+GR+
Sbjct: 302 VVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRF 358
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 174/385 (45%), Gaps = 54/385 (14%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYA--GMDGVDDRHFCRAMVLYKKMLCDGI 119
++K A VF + DL +N ++ Y+ GM + A+ + K M + +
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM-------ALEMVKSMCEENL 232
Query: 120 FPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARK 179
P+ +T ++ + + G+ +H ++ GF S V +L+++Y CG L AR+
Sbjct: 233 KPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQ 292
Query: 180 LFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEA 239
LF M +N++SWNS+I VQ KEA
Sbjct: 293 -------------------------------LFDGMLERNVVSWNSMIDAYVQNENPKEA 321
Query: 240 LELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNM 299
+ +F +M VKP +++ L ACA LG ++ G+++H G++ +V + +L++M
Sbjct: 322 MLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISM 381
Query: 300 YGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
Y KC V A +F ++ + +W AMI FA +G A + F +M VKP+ T+
Sbjct: 382 YCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTY 441
Query: 360 VGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSR------ARLFDESVI 413
V +++A A + +W V+ R L + V+ +VD+ ++ AR
Sbjct: 442 VSVITAIAELSITHHAKWIHGVVMRSCL-DKNVFVTTALVDMYAKCGAIMIAR------- 493
Query: 414 LIRSMPMEPDVYVWGALLGGCQMHG 438
LI M E V W A++ G HG
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHG 518
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 148/356 (41%), Gaps = 59/356 (16%)
Query: 199 YLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITI 258
+ R G +D A +F ++ K + +++++ G + +AL+ F M+ V+P
Sbjct: 79 FCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNF 138
Query: 259 ASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPE 318
+L C + GK +H L ++G D+ T L NMY KC V +A ++F+ MPE
Sbjct: 139 TYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPE 198
Query: 319 KDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSAC------------ 366
+D +W +++ ++ +G+ A + M +KP+ +T V +L A
Sbjct: 199 RDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEI 258
Query: 367 -----------------------AHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLS 403
A G +E R FD M +E V + M+D
Sbjct: 259 HGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM-----LERNVVSWNSMIDAYV 313
Query: 404 RARLFDESVILIRSMPME----PDVYVWGALLGGCQMHGNVELGEKVALHLIDLE---PH 456
+ E++++ + M E DV V GA L C G++E G + H + +E
Sbjct: 314 QNENPKEAMLIFQKMLDEGVKPTDVSVMGA-LHACADLGDLERGRFI--HKLSVELGLDR 370
Query: 457 NHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGG 512
N + +L +Y K D A + L+ R +++ N ++ F+ G
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSR---------TLVSWNAMILGFAQNG 417
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 289 bits (739), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 164/447 (36%), Positives = 243/447 (54%), Gaps = 45/447 (10%)
Query: 86 YNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCT----RWMDGAS 141
YN +I Y V D A ++++M G+ + +T L+ CT W+
Sbjct: 124 YNALISGYTANSKVTD-----AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWL---- 174
Query: 142 GEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLR 201
G +H Q VK G S+V NS I +YM CG + R+LFDE+PV ++TWN+++ GY +
Sbjct: 175 GRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQ 234
Query: 202 NGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASV 261
N GLA + LEL+ +M+ V PD T+ SV
Sbjct: 235 N-------------------------------GLAYDVLELYEQMKSSGVCPDPFTLVSV 263
Query: 262 LSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDT 321
LS+CA LGA G V + NG +V + A ++MY +CG + +A +F+ MP K
Sbjct: 264 LSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSL 323
Query: 322 SAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDV 381
+WTAMI + +HG+G F +M + G++P+ FV +LSAC+HSGL ++G F
Sbjct: 324 VSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRA 383
Query: 382 MKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVE 441
MKR Y +EP HY+C+VDLL RA DE++ I SMP+EPD VWGALLG C++H NV+
Sbjct: 384 MKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVD 443
Query: 442 LGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEI 501
+ E +I+ EP+N +Y+ + +IY + + RIR +++ER +KK PG S +E
Sbjct: 444 MAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKK-PGYSYVEH 502
Query: 502 NGVVQEFSAGGSSELPMKDLVLILDRL 528
G V F AG S +++ +LD L
Sbjct: 503 KGRVHLFLAGDRSHEQTEEVHRMLDEL 529
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 16/224 (7%)
Query: 223 WNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLR 282
WN + L L E++ L+ M + PD + +L +CA L G+ +H ++
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 283 RNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKD--TSAWTAMISVFALHGLGWKA 340
+ G E + + TAL++MY KCGLV A ++FEE P+ + + A+IS + + A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 341 FDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGR----WCFD--VMKRVYLIEPQVYH 394
F M+ GV + VT +GL+ C + GR C + V ++ +
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 395 YACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHG 438
Y + + RLFDE MP++ + W A++ G +G
Sbjct: 201 YMKCGSVEAGRRLFDE-------MPVK-GLITWNAVISGYSQNG 236
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 288 bits (737), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 168/531 (31%), Positives = 299/531 (56%), Gaps = 45/531 (8%)
Query: 6 LIESKSLTLKNALSRLIEQCKNL-RELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSK 64
++ ++ K LS L+ + ++LK+IH +L + S++ L+T+LL +
Sbjct: 1 MLAKQTPLTKQMLSELLRASSSKPKQLKKIHAIVLRTG---FSEKNSLLTQLLEN--LVV 55
Query: 65 YGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCL 124
G YA VF ++ P + ++N + + Y V ++ +++LYKKM G+ P+
Sbjct: 56 IGDMCYARQVFDEMHKPRIFLWNTLFKGY-----VRNQLPFESLLLYKKMRDLGVRPDEF 110
Query: 125 TFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEI 184
T+PF++K ++ D + G +HA VVK+GF G L
Sbjct: 111 TYPFVVKAISQLGDFSCGFALHAHVVKYGF-----------------GCLG--------- 144
Query: 185 PVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFH 244
+ +V+ Y++ G L +A LF M K++++WN+ + VQ G + ALE F+
Sbjct: 145 -----IVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFN 199
Query: 245 EMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCG 304
+M +V+ D T+ S+LSAC QLG+++ G+ ++ R+ I+C++++ A ++M+ KCG
Sbjct: 200 KMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCG 259
Query: 305 LVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLS 364
+ A +FEEM +++ +W+ MI +A++G +A F M+ G++PN+VTF+G+LS
Sbjct: 260 NTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLS 319
Query: 365 ACAHSGLVEQGRWCFDVMKRV--YLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEP 422
AC+H+GLV +G+ F +M + +EP+ HYACMVDLL R+ L +E+ I+ MP+EP
Sbjct: 320 ACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEP 379
Query: 423 DVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRN 482
D +WGALLG C +H ++ LG+KVA L++ P ++++ L +IY AG++D ++R+
Sbjct: 380 DTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRS 439
Query: 483 LLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
++ + KK+ S +E G + F+ G S K + LD + +++
Sbjct: 440 KMR-KLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIR 489
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 288 bits (736), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 172/513 (33%), Positives = 269/513 (52%), Gaps = 48/513 (9%)
Query: 27 NLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVY 86
+L + R+H IL + SDQ + L +S GS YA VF + V+
Sbjct: 92 SLSDALRVHRHILDN----GSDQDPFLATKLIGM-YSDLGSVDYARKVFDKTRKRTIYVW 146
Query: 87 NIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGAS----G 142
N + RA + G H + LY KM G+ + T+ +++K C + G
Sbjct: 147 NALFRALT-LAG----HGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKG 201
Query: 143 EIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRN 202
+ +HA + + G+ S V+ +L+++Y G + A +F +PV
Sbjct: 202 KEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPV---------------- 245
Query: 203 GGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQIS--VKPDKITIAS 260
+N++SW+++I + G A EAL F EM + + P+ +T+ S
Sbjct: 246 ---------------RNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVS 290
Query: 261 VLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKD 320
VL ACA L A++ GK +H Y+ R G++ + + +ALV MYG+CG ++ +F+ M ++D
Sbjct: 291 VLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRD 350
Query: 321 TSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFD 380
+W ++IS + +HG G KA F EM G P VTFV +L AC+H GLVE+G+ F+
Sbjct: 351 VVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFE 410
Query: 381 VMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNV 440
M R + I+PQ+ HYACMVDLL RA DE+ +++ M EP VWG+LLG C++HGNV
Sbjct: 411 TMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNV 470
Query: 441 ELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIE 500
EL E+ + L LEP N Y+ L DIY +A +D KR++ LL+ R +Q K+PG +E
Sbjct: 471 ELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQ-KLPGRCWME 529
Query: 501 INGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
+ + F + M+ + L +L +MK
Sbjct: 530 VRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMK 562
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 175/423 (41%), Gaps = 87/423 (20%)
Query: 113 KMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCG 172
++L P+ T+ LI C + VH ++ G D F LI +Y G
Sbjct: 67 RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLG 126
Query: 173 LLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQ 232
+ ARK+FD K + I WN++ L
Sbjct: 127 SVDYARKVFD-------------------------------KTRKRTIYVWNALFRALTL 155
Query: 233 GGLAKEALELFHEMQQISVKPDKITIASVLSAC-AQLGAIDH---GKWVHSYLRRNGIEC 288
G +E L L+ +M +I V+ D+ T VL AC A ++H GK +H++L R G
Sbjct: 156 AGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSS 215
Query: 289 DVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEM- 347
V I T LV+MY + G V A +F MP ++ +W+AMI+ +A +G ++A F EM
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM 275
Query: 348 -ERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYL--IEPQVYHYACMVDLLSR 404
E PN VT V +L ACA +EQG+ + R L I P + + +V + R
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI---SALVTMYGR 332
Query: 405 A-----------RLFDESVILIRSMPMEPDVYVWG-----------------------AL 430
R+ D V+ S+ V+ +G ++
Sbjct: 333 CGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSV 392
Query: 431 LGGCQMHGNVELGEKVALHLIDLEPHNHAF------YMNLCDIYGKAGRFD-AAKRIRNL 483
LG C G VE G++ L + +H Y + D+ G+A R D AAK ++++
Sbjct: 393 LGACSHEGLVEEGKR----LFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDM 448
Query: 484 LKE 486
E
Sbjct: 449 RTE 451
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 12/217 (5%)
Query: 221 ISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSY 280
IS N +I L + G K+A+ + + P + T ++ C ++ VH +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 281 LRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKA 340
+ NG + D + T L+ MY G V A ++F++ ++ W A+ L G G +
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 341 FDCFLEMERAGVKPNHVTFVGLLSACAHSG-----LVEQGRWCFDVMKRVYLIEPQVYHY 395
+ +M R GV+ + T+ +L AC S L++ + +R Y VY
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGY--SSHVYIM 220
Query: 396 ACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLG 432
+VD+ +R D + + MP+ +V W A++
Sbjct: 221 TTLVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMIA 256
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/496 (33%), Positives = 262/496 (52%), Gaps = 26/496 (5%)
Query: 44 LHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRH 103
S + + L++ F K A F +N D+ +N +I YA +D+
Sbjct: 211 FKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDE-- 268
Query: 104 FCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVF---- 159
A L+ + +F W SG I + V + L D
Sbjct: 269 ---ARQLFDESPVQDVFT--------------WTAMVSGYIQNRMVEEARELFDKMPERN 311
Query: 160 --NGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNG 217
+ N+++ Y+ + A++LFD +P +V TWN+M+ GY + G + A +LF KM
Sbjct: 312 EVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPK 371
Query: 218 KNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWV 277
++ +SW ++I G Q G + EAL LF +M++ + ++ + +S LS CA + A++ GK +
Sbjct: 372 RDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQL 431
Query: 278 HSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLG 337
H L + G E +G AL+ MY KCG +++A ++F+EM KD +W MI+ ++ HG G
Sbjct: 432 HGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFG 491
Query: 338 WKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYAC 397
A F M+R G+KP+ T V +LSAC+H+GLV++GR F M + Y + P HYAC
Sbjct: 492 EVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYAC 551
Query: 398 MVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHN 457
MVDLL RA L +++ L+++MP EPD +WG LLG ++HGN EL E A + +EP N
Sbjct: 552 MVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPEN 611
Query: 458 HAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELP 517
Y+ L ++Y +GR+ ++R ++++ V KK+PG S IEI FS G
Sbjct: 612 SGMYVLLSNLYASSGRWGDVGKLRVRMRDKGV-KKVPGYSWIEIQNKTHTFSVGDEFHPE 670
Query: 518 MKDLVLILDRLCNEMK 533
++ L+ L MK
Sbjct: 671 KDEIFAFLEELDLRMK 686
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 188/420 (44%), Gaps = 54/420 (12%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ + G F A +F + DL +N+MI+ Y V +R+ +A L++ M +
Sbjct: 105 YLRNGEFELARKLFDEMPERDLVSWNVMIKGY-----VRNRNLGKARELFEIMPERDVCS 159
Query: 122 -NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNS----------------- 163
N + + GC + V + L + NS
Sbjct: 160 WNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL 219
Query: 164 -----LINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK 218
L+ ++ + AR+ FD + V DVV+WN+++ GY ++G +D A LF + +
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ 279
Query: 219 NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVH 278
++ +W ++++G +Q + +EA ELF +M + ++++ ++L+ Q ++ K +
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMPE----RNEVSWNAMLAGYVQGERMEMAKELF 335
Query: 279 SYLRRNGIEC-DVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLG 337
+ C +V ++ Y +CG + +A +F++MP++D +W AMI+ ++ G
Sbjct: 336 DVM-----PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHS 390
Query: 338 WKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYAC 397
++A F++MER G + N +F LS CA +E G+ + + Y C
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK------GGYETGC 444
Query: 398 MVD-----LLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLID 452
V + + +E+ L + M + D+ W ++ G HG GE VAL +
Sbjct: 445 FVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHG---FGE-VALRFFE 499
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 153/333 (45%), Gaps = 23/333 (6%)
Query: 156 SDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKM 215
SD+ N I+ YM G + A ++F +P V++N M+ GYLRNG + A LF +M
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 216 NGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGK 275
++++SWN +I G V+ +A ELF +I + D + ++LS AQ G +D +
Sbjct: 122 PERDLVSWNVMIKGYVRNRNLGKARELF----EIMPERDVCSWNTMLSGYAQNGCVDDAR 177
Query: 276 WVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHG 335
V + E + V AL++ Y + +++A +F+ +W ++ F
Sbjct: 178 SVFDRM----PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKK 233
Query: 336 LGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHY 395
+A F M V V++ +++ A SG +++ R FD V+ +
Sbjct: 234 KIVEARQFFDSMNVRDV----VSWNTIITGYAQSGKIDEARQLFDESP-----VQDVFTW 284
Query: 396 ACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEP 455
MV + R+ +E+ L MP +V W A+L G +E+ A L D+ P
Sbjct: 285 TAMVSGYIQNRMVEEARELFDKMPERNEV-SWNAMLAGYVQGERMEM----AKELFDVMP 339
Query: 456 -HNHAFYMNLCDIYGKAGRFDAAKRIRNLLKER 487
N + + + Y + G+ AK + + + +R
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR 372
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 22/247 (8%)
Query: 214 KMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDH 273
K +I WN I+ ++ G EAL +F M + S ++ ++S + G +
Sbjct: 58 KCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWS----SVSYNGMISGYLRNGEFEL 113
Query: 274 GKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFAL 333
+ + + E D+V ++ Y + + +A E+FE MPE+D +W M+S +A
Sbjct: 114 ARKLFDEM----PERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQ 169
Query: 334 HGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVY 393
+G A F M + N V++ LLSA + +E+ F + L+
Sbjct: 170 NGCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVS---- 221
Query: 394 HYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDL 453
+ C++ + + E+ SM + DV W ++ G G ++ A L D
Sbjct: 222 -WNCLLGGFVKKKKIVEARQFFDSMNVR-DVVSWNTIITGYAQSGKID----EARQLFDE 275
Query: 454 EPHNHAF 460
P F
Sbjct: 276 SPVQDVF 282
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/509 (31%), Positives = 269/509 (52%), Gaps = 34/509 (6%)
Query: 17 ALSRLIEQCKNLRELK---RIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATN 73
L+ +++ C L LK +IH QIL S + + ++K G A+
Sbjct: 189 TLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNV-----YAKCGDLRMASY 243
Query: 74 VFHMINNPDLRVYNIMIRAYAGMDGVD------DRHFCRAMVLYKKMLCDGIFPN----- 122
+ I PD + +I YA V+ DR R ++L+ M+ I N
Sbjct: 244 MLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEA 303
Query: 123 --------------CLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLY 168
T +I C +G+ +H KFG + D+ ++L+++Y
Sbjct: 304 LVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMY 363
Query: 169 MTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIIT 228
CG A KLF E+ D + NSM+ Y G +D+A +F ++ K++ISWNS+
Sbjct: 364 SKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTN 423
Query: 229 GLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIEC 288
G Q G E LE FH+M ++ + D+++++SV+SACA + +++ G+ V + G++
Sbjct: 424 GFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDS 483
Query: 289 DVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEME 348
D V+ ++L+++Y KCG V+ +F+ M + D W +MIS +A +G G++A D F +M
Sbjct: 484 DQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMS 543
Query: 349 RAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLF 408
AG++P +TF+ +L+AC + GLVE+GR F+ MK + P H++CMVDLL+RA
Sbjct: 544 VAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYV 603
Query: 409 DESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIY 468
+E++ L+ MP + D +W ++L GC +G +G+K A +I+LEP N Y+ L I+
Sbjct: 604 EEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIF 663
Query: 469 GKAGRFDAAKRIRNLLKERRVQKKIPGCS 497
+G ++++ +R L++E V K PG S
Sbjct: 664 ATSGDWESSALVRKLMRENNVTKN-PGSS 691
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 194/408 (47%), Gaps = 42/408 (10%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
F+K G + A +F+ + D+ N ++ Y ++G + A+ L+K++
Sbjct: 134 FAKAGELSVARRLFNAMPEKDVVTLNSLLHGYI-LNGYAEE----ALRLFKEL---NFSA 185
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ +T ++K C G+ +HAQ++ G D +SL+N+Y CG L A +
Sbjct: 186 DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYML 245
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
++I D + ++++ GY G ++ + LF + + + +I WNS+I+G + + EAL
Sbjct: 246 EQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALV 305
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
LF+EM+ + D T+A+V++AC LG ++ GK +H + + G+ D+V+ + L++MY
Sbjct: 306 LFNEMRN-ETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYS 364
Query: 302 KCGLVQQAFEIFEEMPEKDT-------------------------------SAWTAMISV 330
KCG +A ++F E+ DT +W +M +
Sbjct: 365 KCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNG 424
Query: 331 FALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEP 390
F+ +G + + F +M + + + V+ ++SACA +E G F V L
Sbjct: 425 FSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSD 484
Query: 391 QVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHG 438
QV + ++DL + + + +M ++ D W +++ G +G
Sbjct: 485 QVVS-SSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNG 530
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 174/387 (44%), Gaps = 80/387 (20%)
Query: 157 DVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMN 216
+ F+ N++I YM G + + FD +P D +WN +V G+ + G L A LF M
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMP 151
Query: 217 GKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKW 276
K++++ NS++ G + G A+EAL LF E+ + D IT+ +VL ACA+L A+ GK
Sbjct: 152 EKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQ 208
Query: 277 VHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSA------------- 323
+H+ + G+ECD + ++LVN+Y KCG ++ A + E++ E D +
Sbjct: 209 IHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGR 268
Query: 324 ------------------WTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSA 365
W +MIS + + + +A F EM R + + T +++A
Sbjct: 269 VNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINA 327
Query: 366 CAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVY 425
C G +E G+ Q++ +AC L+ D+ V+ + M
Sbjct: 328 CIGLGFLETGK--------------QMHCHACKFGLI------DDIVVASTLLDMYSKC- 366
Query: 426 VWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLK 485
G+ + C++ VE + + L+ ++ +Y GR D AK
Sbjct: 367 --GSPMEACKLFSEVESYDTILLN-------------SMIKVYFSCGRIDDAK------- 404
Query: 486 ERRVQKKIPGCSMIEINGVVQEFSAGG 512
RV ++I S+I N + FS G
Sbjct: 405 --RVFERIENKSLISWNSMTNGFSQNG 429
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 286 bits (731), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 179/547 (32%), Positives = 284/547 (51%), Gaps = 55/547 (10%)
Query: 21 LIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINN 80
LI CK+ L+ +H QIL L S + L SCS S S Y+ ++F
Sbjct: 35 LIHACKDTASLRHVHAQILRRGVLSSR-----VAAQLVSCS-SLLKSPDYSLSIFRNSEE 88
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCT----RW 136
+ V N +IR ++ F ++ + ML G+ P+ LTFPF++K + RW
Sbjct: 89 RNPFVLNALIRGL-----TENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRW 143
Query: 137 MDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDE------------- 183
+ G +HA +K D F SL+++Y G L +A ++F+E
Sbjct: 144 L----GRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIW 199
Query: 184 ----------------------IPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNII 221
+P + +W++++ GY+ +G L+ A LF M KN++
Sbjct: 200 NVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVV 259
Query: 222 SWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYL 281
SW ++I G Q G + A+ + EM + +KP++ TIA+VLSAC++ GA+ G +H Y+
Sbjct: 260 SWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYI 319
Query: 282 RRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAF 341
NGI+ D IGTALV+MY KCG + A +F M KD +WTAMI +A+HG +A
Sbjct: 320 LDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAI 379
Query: 342 DCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDL 401
CF +M +G KP+ V F+ +L+AC +S V+ G FD M+ Y IEP + HY +VDL
Sbjct: 380 QCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDL 439
Query: 402 LSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFY 461
L RA +E+ L+ +MP+ PD+ W AL C+ H E V+ +L++L+P Y
Sbjct: 440 LGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSY 499
Query: 462 MNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDL 521
+ L + G ++ R L ++R++++ G S IE++G + +FSAG S +++
Sbjct: 500 IFLDKTHASKGNIQDVEK-RRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEI 558
Query: 522 VLILDRL 528
L LD +
Sbjct: 559 GLKLDEI 565
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 285 bits (729), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 161/443 (36%), Positives = 248/443 (55%), Gaps = 17/443 (3%)
Query: 71 ATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLI 130
A +F I PD YNIM+ Y V + +F +A + +M F + ++ +I
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCY-----VRNVNFEKAQSFFDRM----PFKDAASWNTMI 162
Query: 131 KGCTRWMDGASGEIVHAQVVKFGFLS-DVFNGNSLINLYMTCGLLSNARKLFDEIPVTDV 189
G R GE+ A+ + + + + + N++I+ Y+ CG L A F PV V
Sbjct: 163 TGYAR-----RGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGV 217
Query: 190 VTWNSMVIGYLRNGGLDNALDLFRKMN-GKNIISWNSIITGLVQGGLAKEALELFHEMQQ 248
V W +M+ GY++ ++ A +F+ M KN+++WN++I+G V+ ++ L+LF M +
Sbjct: 218 VAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLE 277
Query: 249 ISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQ 308
++P+ ++S L C++L A+ G+ +H + ++ + DV T+L++MY KCG +
Sbjct: 278 EGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGD 337
Query: 309 AFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAH 368
A+++FE M +KD AW AMIS +A HG KA F EM ++P+ +TFV +L AC H
Sbjct: 338 AWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNH 397
Query: 369 SGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWG 428
+GLV G F+ M R Y +EPQ HY CMVDLL RA +E++ LIRSMP P V+G
Sbjct: 398 AGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFG 457
Query: 429 ALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERR 488
LLG C++H NVEL E A L+ L N A Y+ L +IY R++ R+R +KE
Sbjct: 458 TLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESN 517
Query: 489 VQKKIPGCSMIEINGVVQEFSAG 511
V K+PG S IEI V F +
Sbjct: 518 VV-KVPGYSWIEIRNKVHHFRSS 539
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 151/339 (44%), Gaps = 22/339 (6%)
Query: 106 RAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLS-DVFNGNSL 164
R+ L K D IFP +I C R SG+I A V G + + NSL
Sbjct: 48 RSDYLTKPSDQDQIFP----LNKIIARCVR-----SGDIDGALRVFHGMRAKNTITWNSL 98
Query: 165 -INLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISW 223
I + + A +LFDEIP D ++N M+ Y+RN + A F +M K+ SW
Sbjct: 99 LIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASW 158
Query: 224 NSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRR 283
N++ITG + G ++A ELF+ M ++ ++++ +++S + G ++ S+ +
Sbjct: 159 NTMITGYARRGEMEKARELFYSM----MEKNEVSWNAMISGYIECGDLEKA----SHFFK 210
Query: 284 NGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMP-EKDTSAWTAMISVFALHGLGWKAFD 342
VV TA++ Y K V+ A +F++M K+ W AMIS + +
Sbjct: 211 VAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLK 270
Query: 343 CFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLL 402
F M G++PN L C+ ++ GR ++ + L V ++ +
Sbjct: 271 LFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCN-DVTALTSLISMY 329
Query: 403 SRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVE 441
+ ++ L M + DV W A++ G HGN +
Sbjct: 330 CKCGELGDAWKLFEVMK-KKDVVAWNAMISGYAQHGNAD 367
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 285 bits (728), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 155/416 (37%), Positives = 233/416 (56%), Gaps = 3/416 (0%)
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
P+ F L+K C G VH + + +D +SL+++Y CGLL++A+ +
Sbjct: 103 PDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAV 162
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
FD I V + ++W +MV GY ++G + AL+LFR + KN+ SW ++I+G VQ G EA
Sbjct: 163 FDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAF 222
Query: 241 ELFHEMQQISVKP-DKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNM 299
+F EM++ V D + ++S++ ACA L A G+ VH + G + V I AL++M
Sbjct: 223 SVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDM 282
Query: 300 YGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
Y KC V A +IF M +D +WT++I A HG KA + +M GVKPN VTF
Sbjct: 283 YAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTF 342
Query: 360 VGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP 419
VGL+ AC+H G VE+GR F M + Y I P + HY C++DLL R+ L DE+ LI +MP
Sbjct: 343 VGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMP 402
Query: 420 MEPDVYVWGALLGGCQMHGNVELGEKVALHLI-DLEPHNHAFYMNLCDIYGKAGRFDAAK 478
PD W ALL C+ G ++G ++A HL+ + + + Y+ L +IY A +
Sbjct: 403 FPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVS 462
Query: 479 RIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMKI 534
R L E V+K PG S +E+ + F AG +S +D+ +L +L EM+I
Sbjct: 463 EARRKLGEMEVRKD-PGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRI 517
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 147/348 (42%), Gaps = 78/348 (22%)
Query: 133 CTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTW 192
C R + + +HA +VK G + N+L+N+Y CG S+A ++FDE+P
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP------- 65
Query: 193 NSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL-ELFHEMQQISV 251
++ I+W S++T L Q L+ + L +
Sbjct: 66 ------------------------HRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 252 KPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLV----- 306
+PD ++++ ACA LG+IDHG+ VH + + D V+ ++LV+MY KCGL+
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161
Query: 307 --------------------------QQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKA 340
++A E+F +P K+ +WTA+IS F G G +A
Sbjct: 162 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEA 221
Query: 341 FDCFLEMERAGVKP-NHVTFVGLLSACAHSGLVEQGRWCFDVM------KRVYLIEPQVY 393
F F EM R V + + ++ ACA+ GR ++ V++ +
Sbjct: 222 FSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALID 281
Query: 394 HYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVE 441
YA D+++ +F S DV W +L+ G HG E
Sbjct: 282 MYAKCSDVIAAKDIF--------SRMRHRDVVSWTSLIVGMAQHGQAE 321
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 7/183 (3%)
Query: 262 LSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDT 321
L CA+ + K +H+++ + GI + LVN+YGKCG A ++F+EMP +D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 322 SAWTAMISVFALHGLGWKAF-DCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRW--C 378
AW ++++ L K +G++P+ F L+ ACA+ G ++ GR C
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 379 FDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHG 438
++ Y + V + +VD+ ++ L + + + S+ ++ + W A++ G G
Sbjct: 130 HFIVSE-YANDEVV--KSSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSGYAKSG 185
Query: 439 NVE 441
E
Sbjct: 186 RKE 188
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 284 bits (727), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 170/540 (31%), Positives = 285/540 (52%), Gaps = 59/540 (10%)
Query: 10 KSLTLKNALS--------RLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCS 61
++LTL N L L+ C + R T +HS H + LF +
Sbjct: 234 EALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVT-------IHSYSIKHGLESELFVSN 286
Query: 62 -----FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLC 116
++++G VF + DL +N +I+AY + RA+ L+++M
Sbjct: 287 KLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYE-----LNEQPLRAISLFQEMRL 341
Query: 117 DGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFG-FLSDVFNGNSLINLYMTCGLLS 175
I P+CLT L ++ D + V ++ G FL D+ GN+++ +Y GL
Sbjct: 342 SRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGL-- 399
Query: 176 NARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGL 235
+D+A +F + ++ISWN+II+G Q G
Sbjct: 400 -----------------------------VDSARAVFNWLPNTDVISWNTIISGYAQNGF 430
Query: 236 AKEALELFHEMQQI-SVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGT 294
A EA+E+++ M++ + ++ T SVL AC+Q GA+ G +H L +NG+ DV + T
Sbjct: 431 ASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVT 490
Query: 295 ALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKP 354
+L +MYGKCG ++ A +F ++P ++ W +I+ HG G KA F EM GVKP
Sbjct: 491 SLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP 550
Query: 355 NHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVIL 414
+H+TFV LLSAC+HSGLV++G+WCF++M+ Y I P + HY CMVD+ RA + ++
Sbjct: 551 DHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKF 610
Query: 415 IRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRF 474
I+SM ++PD +WGALL C++HGNV+LG+ + HL ++EP + +++ L ++Y AG++
Sbjct: 611 IKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKW 670
Query: 475 DAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMKI 534
+ IR++ + + +K PG S +E++ V+ F G + +++ L L ++K+
Sbjct: 671 EGVDEIRSIAHGKGL-RKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKM 729
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 227/511 (44%), Gaps = 96/511 (18%)
Query: 8 ESKSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGS 67
ESK + + + L C NL+ K +H +++ S + Q I+ L + + G+
Sbjct: 50 ESKEI---DDVHTLFRYCTNLQSAKCLHARLVVSKQI----QNVCISAKLVNL-YCYLGN 101
Query: 68 FTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFP 127
A + F I N D+ +N+MI Y G G + R L+ ML G+ P+ TFP
Sbjct: 102 VALARHTFDHIQNRDVYAWNLMISGY-GRAG-NSSEVIRCFSLF--MLSSGLTPDYRTFP 157
Query: 128 FLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVT 187
++K C +DG +H +KFGF+ DV+ SLI+LY + NAR L
Sbjct: 158 SVLKACRTVIDGNK---IHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARIL------- 207
Query: 188 DVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQ 247
F +M +++ SWN++I+G Q G AKEAL L + ++
Sbjct: 208 ------------------------FDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 248 QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQ 307
+ D +T+ S+LSAC + G + G +HSY ++G+E ++ + L+++Y + G ++
Sbjct: 244 AM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 308 QAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLS--- 364
++F+ M +D +W ++I + L+ +A F EM + ++P+ +T + L S
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 365 ------AC---------------------------AHSGLVEQGRWCFDVMKRVYLIEPQ 391
AC A GLV+ R F+ +L
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFN-----WLPNTD 414
Query: 392 VYHYACMVDLLSRARLFDESVILIRSMPMEPDVY----VWGALLGGCQMHGNVELGEKVA 447
V + ++ ++ E++ + M E ++ W ++L C G + G K+
Sbjct: 415 VISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLH 474
Query: 448 LHLIDLEPHNHAFYM-NLCDIYGKAGRFDAA 477
L+ + F + +L D+YGK GR + A
Sbjct: 475 GRLLKNGLYLDVFVVTSLADMYGKCGRLEDA 505
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/409 (37%), Positives = 241/409 (58%), Gaps = 11/409 (2%)
Query: 133 CTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTW 192
C + D + H VK G L+ V N+L+++Y CGL+S +++F+E+ VV+W
Sbjct: 121 CAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSW 180
Query: 193 NSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQ-QISV 251
++ ++ GL+ ++F +M +N ++W ++ G + G +E LEL EM +
Sbjct: 181 TVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGH 240
Query: 252 KPDKITIASVLSACAQLGAIDHGKWVHSYLRRN----GIEC---DVVIGTALVNMYGKCG 304
+ +T+ S+LSACAQ G + G+WVH Y + G E DV++GTALV+MY KCG
Sbjct: 241 GLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCG 300
Query: 305 LVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLS 364
+ + +F M +++ W A+ S A+HG G D F +M R VKP+ +TF +LS
Sbjct: 301 NIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLS 359
Query: 365 ACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDV 424
AC+HSG+V++G CF + R Y +EP+V HYACMVDLL RA L +E+ IL+R MP+ P+
Sbjct: 360 ACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNE 418
Query: 425 YVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLL 484
V G+LLG C +HG VE+ E++ LI + P N + + + ++Y GR D A +R L
Sbjct: 419 VVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSL 478
Query: 485 KERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
++R + +KIPG S I +N V FS+G S K++ L L+ + ++
Sbjct: 479 RKRGI-RKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIR 526
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 154/363 (42%), Gaps = 77/363 (21%)
Query: 122 NCLTFP---FLIKGCTRWMDGASGEIVHAQVVKFGF--LSDVFNGNSLINLYMTCGLLSN 176
CL++ L++ C G+ +HA + G + N+L Y + G +
Sbjct: 2 KCLSYQKVRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVT 61
Query: 177 ARKLFDEIPVT--DVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGG 234
A+KLFDEIP++ D V W +++ + R G L N
Sbjct: 62 AQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVN--------------------------- 94
Query: 235 LAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGT 294
+++LF EM++ V+ D +++ + CA+L + + H + G+ V +
Sbjct: 95 ----SMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCN 150
Query: 295 ALVNMYGKCGLV-------------------------------QQAFEIFEEMPEKDTSA 323
AL++MYGKCGLV ++ E+F EMPE++ A
Sbjct: 151 ALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVA 210
Query: 324 WTAMISVFALHGLGWKAFDCFLEME-RAGVKPNHVTFVGLLSACAHSGLVEQGRW--CFD 380
WT M++ + G + + EM R G N VT +LSACA SG + GRW +
Sbjct: 211 WTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYA 270
Query: 381 VMKRVYLIEPQVYHY----ACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQM 436
+ K + + E Y +VD+ ++ D S+ + R M + +V W AL G M
Sbjct: 271 LKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLM-RKRNVVTWNALFSGLAM 329
Query: 437 HGN 439
HG
Sbjct: 330 HGK 332
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/404 (38%), Positives = 236/404 (58%), Gaps = 34/404 (8%)
Query: 158 VFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNG 217
V +++ Y + +ARK+FD +P V+W SM++GY++NG +++A +LF M
Sbjct: 203 VITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPV 262
Query: 218 KNIISWNSIITGLVQGG-LAK------------------------------EALELFHEM 246
K +I+ N++I+GL Q G +AK EAL+LF M
Sbjct: 263 KPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILM 322
Query: 247 QQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLV 306
Q+ V+P T+ S+LS CA L ++ HGK VH+ L R + DV + + L+ MY KCG +
Sbjct: 323 QKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGEL 382
Query: 307 QQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAG-VKPNHVTFVGLLSA 365
++ IF+ P KD W ++IS +A HGLG +A F EM +G KPN VTFV LSA
Sbjct: 383 VKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSA 442
Query: 366 CAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVY 425
C+++G+VE+G ++ M+ V+ ++P HYACMVD+L RA F+E++ +I SM +EPD
Sbjct: 443 CSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAA 502
Query: 426 VWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLK 485
VWG+LLG C+ H +++ E A LI++EP N Y+ L ++Y GR+ +R L+K
Sbjct: 503 VWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMK 562
Query: 486 ERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVL-ILDRL 528
R V+K PGCS E+ V F+ GG + P ++ +L ILD L
Sbjct: 563 TRLVRKS-PGCSWTEVENKVHAFTRGGINSHPEQESILKILDEL 605
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 177/418 (42%), Gaps = 104/418 (24%)
Query: 157 DVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMN 216
++ + N L++ YM G + ARK+FD +P +VV+W ++V GY+ NG +D A LF KM
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP 137
Query: 217 GKNIISW-------------------------------NSIITGLVQGGLAKEALELFHE 245
KN +SW S+I GL + G EA E+F E
Sbjct: 138 EKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDE 197
Query: 246 MQQISVKPDKITIASVLSACAQLGAIDHGK-------------WVH---SYLRRNGIE-- 287
M + SV IT ++++ Q +D + W Y++ IE
Sbjct: 198 MSERSV----ITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDA 253
Query: 288 ---------CDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGW 338
V+ A+++ G+ G + +A +F+ M E++ ++W +I + +G
Sbjct: 254 EELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFEL 313
Query: 339 KAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQG--------RWCFDVMKRVYLIEP 390
+A D F+ M++ GV+P T + +LS CA + G R FDV VY+
Sbjct: 314 EALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDV--DVYVASV 371
Query: 391 QVYHYACMVDLLSRARLFD------------------------ESVILIRSMPM----EP 422
+ Y +L+ +FD E++ + MP+ +P
Sbjct: 372 LMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKP 431
Query: 423 DVYVWGALLGGCQMHGNVELGEKVALHL---IDLEPHNHAFYMNLCDIYGKAGRFDAA 477
+ + A L C G VE G K+ + ++P A Y + D+ G+AGRF+ A
Sbjct: 432 NEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPIT-AHYACMVDMLGRAGRFNEA 488
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 149/323 (46%), Gaps = 21/323 (6%)
Query: 172 GLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLV 231
G + ARKLFD + +WNSMV GY N +A LF +M +NIISWN +++G +
Sbjct: 31 GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYM 90
Query: 232 QGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVV 291
+ G EA ++F M + +V ++ +++ G +D V L E + V
Sbjct: 91 KNGEIDEARKVFDLMPERNV----VSWTALVKGYVHNGKVD----VAESLFWKMPEKNKV 142
Query: 292 IGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAG 351
T ++ + + G + A +++E +P+KD A T+MI G +A + F EM
Sbjct: 143 SWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERS 202
Query: 352 VKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDES 411
V +T+ +++ + V+ R FDVM + +V + ++ + R+ D
Sbjct: 203 V----ITWTTMVTGYGQNNRVDDARKIFDVMPE----KTEVSWTSMLMGYVQNGRIEDAE 254
Query: 412 VILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKA 471
L MP++P V A++ G G + +V ++ N A + + I+ +
Sbjct: 255 E-LFEVMPVKP-VIACNAMISGLGQKGEIAKARRV---FDSMKERNDASWQTVIKIHERN 309
Query: 472 GRFDAAKRIRNLLKERRVQKKIP 494
G A + L++++ V+ P
Sbjct: 310 GFELEALDLFILMQKQGVRPTFP 332
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 122/274 (44%), Gaps = 40/274 (14%)
Query: 107 AMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLIN 166
A+ L+ M G+ P T ++ C G+ VHAQ+V+ F DV+ + L+
Sbjct: 315 ALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMT 374
Query: 167 LYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSI 226
+Y+ CG L ++ +FD P D++ WNS++ GY +
Sbjct: 375 MYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASH------------------------ 410
Query: 227 ITGLVQGGLAKEALELFHEMQ-QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRN- 284
GL +EAL++F EM S KP+++T + LSAC+ G ++ G ++ +
Sbjct: 411 -------GLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVF 463
Query: 285 GIECDVVIGTALVNMYGKCGLVQQAFEIFEEMP-EKDTSAWTAMISVFALHGLGWKAFDC 343
G++ +V+M G+ G +A E+ + M E D + W +++ H A C
Sbjct: 464 GVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFC 523
Query: 344 FLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRW 377
++ ++P + LLS S QGRW
Sbjct: 524 AKKL--IEIEPENSGTYILLSNMYAS----QGRW 551
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 131/300 (43%), Gaps = 27/300 (9%)
Query: 191 TWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQIS 250
T N + R G + A LF + K+I SWNS++ G + ++A +LF EM
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM---- 74
Query: 251 VKPDK--ITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQ 308
PD+ I+ ++S + G ID + V + E +VV TALV Y G V
Sbjct: 75 --PDRNIISWNGLVSGYMKNGEIDEARKVFDLMP----ERNVVSWTALVKGYVHNGKVDV 128
Query: 309 AFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAH 368
A +F +MPEK+ +WT M+ F G D ++ +++ ++
Sbjct: 129 AESLFWKMPEKNKVSWTVMLIGFLQDG----RIDDACKLYEMIPDKDNIARTSMIHGLCK 184
Query: 369 SGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWG 428
G V++ R FD M E V + MV + D++ + MP + +V W
Sbjct: 185 EGRVDEAREIFDEMS-----ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVS-WT 238
Query: 429 ALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMN-LCDIYGKAGRFDAAKRIRNLLKER 487
++L G +G +E E+ L ++ P N + G+ G A+R+ + +KER
Sbjct: 239 SMLMGYVQNGRIEDAEE----LFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKER 294
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/515 (31%), Positives = 274/515 (53%), Gaps = 41/515 (7%)
Query: 21 LIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKY-GSFTYATNVFHMIN 79
L+++C N+ E K++H + + + +L C+ S + S YA ++F I+
Sbjct: 36 LLKRCHNIDEFKQVHARFIKL--SLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGID 93
Query: 80 NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDG 139
+P +N MIR Y V+ F A+ Y +M+ G P+ T+P L+K CTR
Sbjct: 94 DPCTFDFNTMIRGY-----VNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSI 148
Query: 140 ASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGY 199
G+ +H QV K G +DVF NSLIN+Y C
Sbjct: 149 REGKQIHGQVFKLGLEADVFVQNSLINMYGRC---------------------------- 180
Query: 200 LRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEM-QQISVKPDKITI 258
G ++ + +F K+ K SW+S+++ G+ E L LF M + ++K ++ +
Sbjct: 181 ---GEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGM 237
Query: 259 ASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPE 318
S L ACA GA++ G +H +L RN E ++++ T+LV+MY KCG + +A IF++M +
Sbjct: 238 VSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEK 297
Query: 319 KDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWC 378
++ ++AMIS ALHG G A F +M + G++P+HV +V +L+AC+HSGLV++GR
Sbjct: 298 RNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRV 357
Query: 379 FDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHG 438
F M + +EP HY C+VDLL RA L +E++ I+S+P+E + +W L C++
Sbjct: 358 FAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQ 417
Query: 439 NVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSM 498
N+ELG+ A L+ L HN Y+ + ++Y + +D R R + + + K+ PG S+
Sbjct: 418 NIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGL-KQTPGFSI 476
Query: 499 IEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
+E+ G F + S K++ +L ++ ++K
Sbjct: 477 VELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLK 511
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/477 (32%), Positives = 242/477 (50%), Gaps = 50/477 (10%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+SK G + +F PD+ YN MI Y + ++ L+K+++ G
Sbjct: 266 YSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETE-----LSLSLFKELMLSGARL 320
Query: 122 NCLTFPFLIKGCTRWMDGASGEI-----VHAQVVKFGFLSDVFNGNSLINLYMTCGLLSN 176
T L+ SG + +H +K FLS +L +Y + +
Sbjct: 321 RSSTLVSLVP--------VSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIES 372
Query: 177 ARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLA 236
ARKLFDE P K++ SWN++I+G Q GL
Sbjct: 373 ARKLFDESP-------------------------------EKSLPSWNAMISGYTQNGLT 401
Query: 237 KEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTAL 296
++A+ LF EMQ+ P+ +TI +LSACAQLGA+ GKWVH +R E + + TAL
Sbjct: 402 EDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTAL 461
Query: 297 VNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNH 356
+ MY KCG + +A +F+ M +K+ W MIS + LHG G +A + F EM +G+ P
Sbjct: 462 IGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTP 521
Query: 357 VTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIR 416
VTF+ +L AC+H+GLV++G F+ M Y EP V HYACMVD+L RA ++ I
Sbjct: 522 VTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIE 581
Query: 417 SMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDA 476
+M +EP VW LLG C++H + L V+ L +L+P N +++ L +I+ +
Sbjct: 582 AMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQ 641
Query: 477 AKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
A +R K+R++ K PG ++IEI F++G S +K++ L++L +M+
Sbjct: 642 AATVRQTAKKRKLAKA-PGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMR 697
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 192/440 (43%), Gaps = 58/440 (13%)
Query: 9 SKSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHS-SDQYHLITRLLFSCSFSKYGS 67
+ +L KN ++ ++ L + H QI+ LH + L+T+L + S G+
Sbjct: 14 TAALISKNTYLDFFKRSTSISHLAQTHAQII----LHGFRNDISLLTKL--TQRLSDLGA 67
Query: 68 FTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFP 127
YA ++F + PD+ ++N+++R ++ V++ V + PN T+
Sbjct: 68 IYYARDIFLSVQRPDVFLFNVLMRGFS----VNESPHSSLSVFAHLRKSTDLKPNSSTYA 123
Query: 128 FLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVT 187
F I + + D +G ++H Q V G S++ G++++ +Y + +ARK+FD +P
Sbjct: 124 FAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEK 183
Query: 188 DVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQ 247
D + WN+M+ GY +N ++ +FR + +
Sbjct: 184 DTILWNTMISGYRKNEMYVESIQVFRDL------------------------------IN 213
Query: 248 QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQ 307
+ + D T+ +L A A+L + G +HS + G + T +++Y KCG ++
Sbjct: 214 ESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIK 273
Query: 308 QAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACA 367
+F E + D A+ AMI + +G + F E+ +G + T V L+
Sbjct: 274 MGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSG 333
Query: 368 HSGLVEQGR-WCFDVMKRVYLIEPQVYH-----YACMVDLLSRARLFDESVILIRSMPME 421
H L+ +C +K +L V Y+ + ++ S +LFDES +S+P
Sbjct: 334 HLMLIYAIHGYC---LKSNFLSHASVSTALTTVYSKLNEIESARKLFDESP--EKSLPS- 387
Query: 422 PDVYVWGALLGGCQMHGNVE 441
W A++ G +G E
Sbjct: 388 -----WNAMISGYTQNGLTE 402
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 175/489 (35%), Positives = 268/489 (54%), Gaps = 59/489 (12%)
Query: 11 SLTLKNALSRLIEQCKNLRELK---RIHTQI---LTSPNLHSSDQYHLITRLLFSCSFSK 64
SLT + L+E C +LR + R+H I L NL S + + RL SC +++
Sbjct: 88 SLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSK---LVRLYASCGYAE 144
Query: 65 YGSFTYATNVFHMINNPDLR--VYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPN 122
A VF ++ D +N +I YA + +D AM LY +M DG+ P+
Sbjct: 145 V-----AHEVFDRMSKRDSSPFAWNSLISGYAELGQYED-----AMALYFQMAEDGVKPD 194
Query: 123 CLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFD 182
TFP ++K C GE +H +VK GF DV+ N+L+ +Y CG + AR +FD
Sbjct: 195 RFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFD 254
Query: 183 EIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALEL 242
IP D V+WNSM+ GYL +G L ALD+FR M VQ G
Sbjct: 255 MIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLM---------------VQNG-------- 291
Query: 243 FHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGK 302
++PDK+ I+SVL A++ + HG+ +H ++ R G+E ++ + AL+ +Y K
Sbjct: 292 --------IEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSK 340
Query: 303 CGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGL 362
G + QA IF++M E+DT +W A+IS + + G K F+ +M RA KP+ +TFV +
Sbjct: 341 RGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNGLKYFE---QMHRANAKPDGITFVSV 397
Query: 363 LSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESV-ILIRSMPME 421
LS CA++G+VE G F +M + Y I+P++ HYACMV+L RA + +E+ ++++ M +E
Sbjct: 398 LSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLE 457
Query: 422 PDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIR 481
VWGALL C +HGN ++GE A L +LEP N + L IY KA R + +R+R
Sbjct: 458 AGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVR 517
Query: 482 NLLKERRVQ 490
++ +R ++
Sbjct: 518 QMMVDRGLE 526
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 157/434 (36%), Positives = 242/434 (55%), Gaps = 13/434 (2%)
Query: 19 SRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMI 78
S + C N +LK+IHT+I+ H+ L+ R L S S S +G YA+ VF+ +
Sbjct: 24 SYFLRTCSNFSQLKQIHTKIIK----HNLTNDQLLVRQLISVS-SSFGETQYASLVFNQL 78
Query: 79 NNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMD 138
+P +N+MIR+ + V+ + ++ M+ + TFPF+IK C
Sbjct: 79 QSPSTFTWNLMIRSLS----VNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSS 134
Query: 139 GASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIG 198
G VH +K GF +DVF N+L++LY CG + RK+FD++P +V+W +M+ G
Sbjct: 135 IRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYG 194
Query: 199 YLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITI 258
+ N LD+A +F +M +N++SW ++IT V+ EA +LF MQ VKP++ TI
Sbjct: 195 LVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTI 254
Query: 259 ASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPE 318
++L A QLG++ G+WVH Y +NG D +GTAL++MY KCG +Q A ++F+ M
Sbjct: 255 VNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQG 314
Query: 319 KDTSAWTAMISVFALHGLGWKAFDCF-LEMERAGVKPNHVTFVGLLSACAHSGLVEQGRW 377
K + W +MI+ +HG G +A F E A V+P+ +TFVG+LSACA++G V+ G
Sbjct: 315 KSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLR 374
Query: 378 CFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMH 437
F M +VY I P H ACM+ LL +A +++ L+ SM +PD + + G
Sbjct: 375 YFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD---FNSSFGNEYTD 431
Query: 438 GNVELGEKVALHLI 451
G E E + H I
Sbjct: 432 GMNETNETPSQHQI 445
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 162/462 (35%), Positives = 259/462 (56%), Gaps = 28/462 (6%)
Query: 74 VFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKML-CDGIFPNCLTFPFLIKG 132
VF + + + ++N MI Y+ + H A++L+ M G+ N T ++
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYS-----QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA 414
Query: 133 CTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTW 192
C R + E +H VVK G D F N+L+++Y G + A ++F ++ D+VTW
Sbjct: 415 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTW 474
Query: 193 NSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVK 252
N+M+ GY+ + ++AL L KM ++ ++K A ++S+K
Sbjct: 475 NTMITGYVFSEHHEDALLLLHKMQN-------------LERKVSKGA-------SRVSLK 514
Query: 253 PDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEI 312
P+ IT+ ++L +CA L A+ GK +H+Y +N + DV +G+ALV+MY KCG +Q + ++
Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 574
Query: 313 FEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLV 372
F+++P+K+ W +I + +HG G +A D M GVKPN VTF+ + +AC+HSG+V
Sbjct: 575 FDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMV 634
Query: 373 EQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPD-VYVWGALL 431
++G F VMK Y +EP HYAC+VDLL RA E+ L+ MP + + W +LL
Sbjct: 635 DEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694
Query: 432 GGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQK 491
G ++H N+E+GE A +LI LEP+ + Y+ L +IY AG +D A +R +KE+ V+K
Sbjct: 695 GASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRK 754
Query: 492 KIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
+ PGCS IE V +F AG SS + L L+ L M+
Sbjct: 755 E-PGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMR 795
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 135/287 (47%), Gaps = 50/287 (17%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKM------L 115
+S+ G A +F + + DL +N MI Y V H A++L KM +
Sbjct: 450 YSRLGKIDIAMRIFGKMEDRDLVTWNTMITGY-----VFSEHHEDALLLLHKMQNLERKV 504
Query: 116 CDG-----IFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMT 170
G + PN +T ++ C A G+ +HA +K +DV G++L+++Y
Sbjct: 505 SKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAK 564
Query: 171 CGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGL 230
CG L +RK+FD+IP +V+TWN +++ Y +G A+DL R M +
Sbjct: 565 CGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMM--------------M 610
Query: 231 VQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRN-GIECD 289
VQG VKP+++T SV +AC+ G +D G + ++ + G+E
Sbjct: 611 VQG-----------------VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPS 653
Query: 290 VVIGTALVNMYGKCGLVQQAFEIFEEMPE--KDTSAWTAMISVFALH 334
+V++ G+ G +++A+++ MP AW++++ +H
Sbjct: 654 SDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIH 700
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 172/422 (40%), Gaps = 72/422 (17%)
Query: 106 RAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSD-VFNGNSL 164
A++ Y M+ GI P+ FP L+K D G+ +HA V KFG+ D V N+L
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 165 INLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWN 224
+NLY CG K+FD +++ +N +SWN
Sbjct: 140 VNLYRKCGDFGAVYKVFD-------------------------------RISERNQVSWN 168
Query: 225 SIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAID---HGKWVHSYL 281
S+I+ L + ALE F M +V+P T+ SV++AC+ L + GK VH+Y
Sbjct: 169 SLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYG 228
Query: 282 RRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAF 341
R G E + I LV MYGK G + + + +D W ++S + +A
Sbjct: 229 LRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEAL 287
Query: 342 DCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDL 401
+ EM GV+P+ T +L AC+H ++ G+ + ++ + + +VD+
Sbjct: 288 EYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDM 347
Query: 402 -------LSRARLFD------------------------ESVILIRSMPMEPDVYVWGAL 430
LS R+FD E+++L M +
Sbjct: 348 YCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTT 407
Query: 431 LGG----CQMHGNVELGEKVALHLIDLEPHNHAFYMN-LCDIYGKAGRFDAAKRIRNLLK 485
+ G C G E + ++ F N L D+Y + G+ D A RI ++
Sbjct: 408 MAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME 467
Query: 486 ER 487
+R
Sbjct: 468 DR 469
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 170/378 (44%), Gaps = 46/378 (12%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ K G F VF I+ + +N +I + + + A+ ++ ML + + P
Sbjct: 143 YRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWE-----MALEAFRCMLDENVEP 197
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNG---NSLINLYMTCGLLSNAR 178
+ T ++ C+ + G ++ QV +G N N+L+ +Y G L++++
Sbjct: 198 SSFTLVSVVTACSN-LPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSK 256
Query: 179 KLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKE 238
L G+++++WN++++ L Q E
Sbjct: 257 VLLGSF-------------------------------GGRDLVTWNTVLSSLCQNEQLLE 285
Query: 239 ALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNG-IECDVVIGTALV 297
ALE EM V+PD+ TI+SVL AC+ L + GK +H+Y +NG ++ + +G+ALV
Sbjct: 286 ALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALV 345
Query: 298 NMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMER-AGVKPNH 356
+MY C V +F+ M ++ W AMI+ ++ + +A F+ ME AG+ N
Sbjct: 346 DMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANS 405
Query: 357 VTFVGLLSACAHSGLVEQGRWCFD-VMKRVYLIEPQVYHYACMVDLLSRARLFDESVILI 415
T G++ AC SG + V+KR ++ + ++D+ SR D ++ +
Sbjct: 406 TTMAGVVPACVRSGAFSRKEAIHGFVVKRG--LDRDRFVQNTLMDMYSRLGKIDIAMRIF 463
Query: 416 RSMPMEPDVYVWGALLGG 433
M + D+ W ++ G
Sbjct: 464 GKME-DRDLVTWNTMITG 480
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 167/391 (42%), Gaps = 51/391 (13%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ K G + + DL +N ++ + + A+ ++M+ +G+ P
Sbjct: 246 YGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC-----QNEQLLEALEYLREMVLEGVEP 300
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSD-VFNGNSLINLYMTCGLLSNARKL 180
+ T ++ C+ +G+ +HA +K G L + F G++L+++Y C + + R++
Sbjct: 301 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
FD + + WN+M+ GY +N KEAL
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEH-------------------------------DKEAL 389
Query: 241 ELFHEMQQIS-VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNM 299
LF M++ + + + T+A V+ AC + GA + +H ++ + G++ D + L++M
Sbjct: 390 LLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDM 449
Query: 300 YGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEME----------- 348
Y + G + A IF +M ++D W MI+ + A +M+
Sbjct: 450 YSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGAS 509
Query: 349 RAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLF 408
R +KPN +T + +L +CA + +G+ + L V + +VD+ ++
Sbjct: 510 RVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNL-ATDVAVGSALVDMYAKCGCL 568
Query: 409 DESVILIRSMPMEPDVYVWGALLGGCQMHGN 439
S + +P + +V W ++ MHGN
Sbjct: 569 QMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 84/155 (54%), Gaps = 7/155 (4%)
Query: 223 WNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLR 282
W ++ V+ L +EA+ + +M + +KPD ++L A A L ++ GK +H+++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 283 RNGIECD-VVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMIS---VFALHGLGW 338
+ G D V + LVN+Y KCG +++F+ + E++ +W ++IS F +
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 339 KAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVE 373
+AF C L+ V+P+ T V +++AC++ + E
Sbjct: 185 EAFRCMLD---ENVEPSSFTLVSVVTACSNLPMPE 216
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 161/454 (35%), Positives = 242/454 (53%), Gaps = 40/454 (8%)
Query: 61 SFSKYGSFTYATNVFHMINNPDLRV--YNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDG 118
++ K G A VF I+ D V +N M +AY+ D A LY ML +
Sbjct: 197 TYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFD-----AFGLYCLMLREE 251
Query: 119 IFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNAR 178
P+ TF L C G ++H+ + G D+ N+ I++Y +AR
Sbjct: 252 FKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSAR 311
Query: 179 KLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKE 238
LFD M + +SW +I+G + G E
Sbjct: 312 LLFD-------------------------------IMTSRTCVSWTVMISGYAEKGDMDE 340
Query: 239 ALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECD-VVIGTALV 297
AL LFH M + KPD +T+ S++S C + G+++ GKW+ + G + D V+I AL+
Sbjct: 341 ALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALI 400
Query: 298 NMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHV 357
+MY KCG + +A +IF+ PEK WT MI+ +AL+G+ +A F +M KPNH+
Sbjct: 401 DMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHI 460
Query: 358 TFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRS 417
TF+ +L ACAHSG +E+G F +MK+VY I P + HY+CMVDLL R +E++ LIR+
Sbjct: 461 TFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRN 520
Query: 418 MPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAA 477
M +PD +WGALL C++H NV++ E+ A L +LEP A Y+ + +IY AG +D
Sbjct: 521 MSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGF 580
Query: 478 KRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAG 511
RIR+++K+R + KK PG S+I++NG F+ G
Sbjct: 581 ARIRSIMKQRNI-KKYPGESVIQVNGKNHSFTVG 613
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 197/462 (42%), Gaps = 73/462 (15%)
Query: 83 LRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASG 142
+ +N+ IR + V+ +++L+++M G PN TFPF+ K C R D
Sbjct: 17 VNAWNLQIR-----EAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCC 71
Query: 143 EIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRN 202
E+VHA ++K F SDVF G + +++++ C + A K+F+ +P D TWN+M+ G+ ++
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQS 131
Query: 203 GGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVL 262
G D A LFR+M I + + L+Q +++L+L M + +
Sbjct: 132 GHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGI----------- 180
Query: 263 SACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTS 322
R G++ V + ++ YGKCG + A +FE + D +
Sbjct: 181 --------------------RLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRT 220
Query: 323 --AWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWC-- 378
+W +M +++ G + AF + M R KP+ TF+ L ++C + + QGR
Sbjct: 221 VVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHS 280
Query: 379 ----FDVMKRVYLIEPQVYHYACMVDLLSRARLF------------------------DE 410
+ + I + Y+ D S LF DE
Sbjct: 281 HAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDE 340
Query: 411 SVILIRSM---PMEPDVYVWGALLGGCQMHGNVELGEKVALH--LIDLEPHNHAFYMNLC 465
++ L +M +PD+ +L+ GC G++E G+ + + + N L
Sbjct: 341 ALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALI 400
Query: 466 DIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQE 507
D+Y K G A+ I + E+ V + +NG+ E
Sbjct: 401 DMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLE 442
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 179/427 (41%), Gaps = 38/427 (8%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
F K S YA VF + D +N M+ + D +A L+++M + I P
Sbjct: 97 FVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD-----KAFSLFREMRLNEITP 151
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ +T LI+ + E +HA ++ G V N+ I+ Y CG L +A+ +F
Sbjct: 152 DSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVF 211
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
+ I D + ++SWNS+ G A +A
Sbjct: 212 EAIDRGD-----------------------------RTVVSWNSMFKAYSVFGEAFDAFG 242
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
L+ M + KPD T ++ ++C + G+ +HS+ G + D+ ++MY
Sbjct: 243 LYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYS 302
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
K A +F+ M + +WT MIS +A G +A F M ++G KP+ VT +
Sbjct: 303 KSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLS 362
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVY-LIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
L+S C G +E G+W D +Y V ++D+ S+ E+ + + P
Sbjct: 363 LISGCGKFGSLETGKW-IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP- 420
Query: 421 EPDVYVWGALLGGCQMHGNVELGEKVALHLIDLE-PHNHAFYMNLCDIYGKAGRFDAAKR 479
E V W ++ G ++G K+ +IDL+ NH ++ + +G +
Sbjct: 421 EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE 480
Query: 480 IRNLLKE 486
+++K+
Sbjct: 481 YFHIMKQ 487
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%)
Query: 211 LFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGA 270
L+R ++ +WN I V E+L LF EM++ +P+ T V ACA+L
Sbjct: 8 LYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAD 67
Query: 271 IDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISV 330
+ + VH++L ++ DV +GTA V+M+ KC V A ++FE MPE+D + W AM+S
Sbjct: 68 VGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSG 127
Query: 331 FALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACA 367
F G KAF F EM + P+ VT + L+ + +
Sbjct: 128 FCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSAS 164
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 148/330 (44%), Gaps = 20/330 (6%)
Query: 21 LIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINN 80
L C+N L + +++ S +H + F +SK A +F ++ +
Sbjct: 262 LAASCQNPETLTQ--GRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTS 319
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGA 140
+ +MI YA +D+ A+ L+ M+ G P+ +T LI GC ++
Sbjct: 320 RTCVSWTVMISGYAEKGDMDE-----ALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLE 374
Query: 141 SGEIVHAQVVKFGFLSD-VFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGY 199
+G+ + A+ +G D V N+LI++Y CG + AR +FD P VVTW +M+ GY
Sbjct: 375 TGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGY 434
Query: 200 LRNGGLDNALDLFRKM----NGKNIISWNSIITGLVQGGLAKEALELFHEMQQI-SVKPD 254
NG AL LF KM N I++ +++ G ++ E FH M+Q+ ++ P
Sbjct: 435 ALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPG 494
Query: 255 KITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVN---MYGKCGLVQQAFE 311
+ ++ + G ++ +R + D I AL+N ++ + +QA E
Sbjct: 495 LDHYSCMVDLLGRKGKLEEAL---ELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAE 551
Query: 312 IFEEMPEKDTSAWTAMISVFALHGLGWKAF 341
+ + + + M +++A G+ W F
Sbjct: 552 SLFNLEPQMAAPYVEMANIYAAAGM-WDGF 580
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 279 bits (713), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 148/374 (39%), Positives = 221/374 (59%), Gaps = 3/374 (0%)
Query: 157 DVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMN 216
D+ N++I+ Y+ G + AR LFD++P DV++WN+++ GY G ++ +F M
Sbjct: 89 DIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMP 148
Query: 217 GKNIISWNSIITGLVQGGLAKEALELFHEM-QQISVKPDKITIASVLSACAQLGAIDHGK 275
+N+ SWN +I G Q G E L F M + SV P+ T+ VLSACA+LGA D GK
Sbjct: 149 ERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGK 208
Query: 276 WVHSYLRRNGI-ECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALH 334
WVH Y G + DV + AL++MYGKCG ++ A E+F+ + +D +W MI+ A H
Sbjct: 209 WVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAH 268
Query: 335 GLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYH 394
G G +A + F EM+ +G+ P+ VTFVG+L AC H GLVE G F+ M + I P++ H
Sbjct: 269 GHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEH 328
Query: 395 YACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLE 454
C+VDLLSRA ++V I MP++ D +W LLG +++ V++GE LI LE
Sbjct: 329 CGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLE 388
Query: 455 PHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSS 514
P N A ++ L +IYG AGRFD A R++ +++ +K+ G S IE + + +F + G
Sbjct: 389 PRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKE-AGVSWIETDDGLVKFYSSGEK 447
Query: 515 ELPMKDLVLILDRL 528
++L IL L
Sbjct: 448 HPRTEELQRILREL 461
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 120/281 (42%), Gaps = 43/281 (15%)
Query: 162 NSLINLYMTC--GLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKN 219
N + M C G++++A K+F E+ +VV W SM+ GYL N L +A F ++
Sbjct: 30 NQMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERD 89
Query: 220 IISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHS 279
I+ WN++I+G ++ G EA LF +M C
Sbjct: 90 IVLWNTMISGYIEMGNMLEARSLFDQM-----------------PCR------------- 119
Query: 280 YLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWK 339
DV+ ++ Y G ++ +F++MPE++ +W +I +A +G +
Sbjct: 120 ---------DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSE 170
Query: 340 AFDCFLEM-ERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACM 398
F M + V PN T +LSACA G + G+W + + + V +
Sbjct: 171 VLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNAL 230
Query: 399 VDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGN 439
+D+ + + ++ + + + D+ W ++ G HG+
Sbjct: 231 IDMYGKCGAIEIAMEVFKGIK-RRDLISWNTMINGLAAHGH 270
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/474 (33%), Positives = 259/474 (54%), Gaps = 10/474 (2%)
Query: 64 KYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF-PN 122
+ G A F + D+ +N MI + G D RA+ ++ KML D + P+
Sbjct: 224 QVGQMDLAMAQFEQMAERDIVTWNSMISGF-NQRGYD----LRALDIFSKMLRDSLLSPD 278
Query: 123 CLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFD 182
T ++ C G+ +H+ +V GF N+LI++Y CG + AR+L +
Sbjct: 279 RFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIE 338
Query: 183 EIPVTD--VVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
+ D + + +++ GY++ G ++ A ++F + +++++W ++I G Q G EA+
Sbjct: 339 QRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAI 398
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
LF M +P+ T+A++LS + L ++ HGK +H ++G V + AL+ MY
Sbjct: 399 NLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMY 458
Query: 301 GKCGLVQQAFEIFEEMP-EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
K G + A F+ + E+DT +WT+MI A HG +A + F M G++P+H+T+
Sbjct: 459 AKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITY 518
Query: 360 VGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP 419
VG+ SAC H+GLV QGR FD+MK V I P + HYACMVDL RA L E+ I MP
Sbjct: 519 VGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMP 578
Query: 420 MEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKR 479
+EPDV WG+LL C++H N++LG+ A L+ LEP N Y L ++Y G+++ A +
Sbjct: 579 IEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAK 638
Query: 480 IRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
IR +K+ RV+K+ G S IE+ V F + ++ + + ++ +E+K
Sbjct: 639 IRKSMKDGRVKKE-QGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIK 691
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 151/566 (26%), Positives = 251/566 (44%), Gaps = 106/566 (18%)
Query: 17 ALSRLIEQCKNLRE-----------LKRIHTQILTSP------------NLHSSDQYHLI 53
+LS L+E C NL + + +H +++ S N++S Y L
Sbjct: 8 SLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALH 67
Query: 54 TRLLFS--------------CSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGV 99
R LF ++SK G F + D + MI Y +
Sbjct: 68 ARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIG-- 125
Query: 100 DDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIK--GCTRWMDGASGEIVHAQVVKFGFLSD 157
+ +A+ + M+ +GI P T ++ TR M+ +G+ VH+ +VK G +
Sbjct: 126 ---QYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCME--TGKKVHSFIVKLGLRGN 180
Query: 158 VFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNG 217
V NSL+N+Y CG A+ +FD + V D+ +WN+M+ +++ G +D A+ F +M
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Query: 218 KNIISWNSIITGLVQGGLAKEALELFHEMQQIS-VKPDKITIASVLSACAQLGAIDHGKW 276
++I++WNS+I+G Q G AL++F +M + S + PD+ T+ASVLSACA L + GK
Sbjct: 241 RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQ 300
Query: 277 VHSYLRRNGIECDVVIGTALVNMYGKCGLVQ----------------------------- 307
+HS++ G + ++ AL++MY +CG V+
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL 360
Query: 308 ----QAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLL 363
QA IF + ++D AWTAMI + HG +A + F M G +PN T +L
Sbjct: 361 GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAML 420
Query: 364 SACAHSGLVEQGRWCFDVMKR------VYLIEPQVYHYACMVDLLSRARLFDESVILIRS 417
S + + G+ + V + + YA ++ S +R FD LIR
Sbjct: 421 SVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFD----LIRC 476
Query: 418 MPMEPDVYVWGALLGGCQMHGNVELGEKVALHLID------LEPHNHAFYMNLCDIYGKA 471
E D W +++ HG+ E AL L + L P +H Y+ + A
Sbjct: 477 ---ERDTVSWTSMIIALAQHGHAE----EALELFETMLMEGLRP-DHITYVGVFSACTHA 528
Query: 472 GRFDAAKRIRNLLKERRVQKKIPGCS 497
G + ++ +++K+ V K IP S
Sbjct: 529 GLVNQGRQYFDMMKD--VDKIIPTLS 552
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 254/482 (52%), Gaps = 72/482 (14%)
Query: 18 LSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHM 77
L+ L+ C +L ++RIH I S L DQY
Sbjct: 50 LATLLSNCTSLARVRRIHGDIFRSRIL---DQY--------------------------- 79
Query: 78 INNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWM 137
P ++N ++R+Y + D A+ +Y M+ + P+ + P +IK +
Sbjct: 80 ---PIAFLWNNIMRSYIRHESPLD-----AIQVYLGMVRSTVLPDRYSLPIVIKAAVQIH 131
Query: 138 DGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVI 197
D G+ +H+ V+ GF+ D F + I LY G NARK+FDE P
Sbjct: 132 DFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPE----------- 180
Query: 198 GYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKIT 257
RK+ SWN+II GL G A EA+E+F +M++ ++PD T
Sbjct: 181 ---------------RKLG-----SWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFT 220
Query: 258 IASVLSACAQLGAIDHGKWVHSYLRRNGIE--CDVVIGTALVNMYGKCGLVQQAFEIFEE 315
+ SV ++C LG + +H + + E D+++ +L++MYGKCG + A IFEE
Sbjct: 221 MVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEE 280
Query: 316 MPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQG 375
M +++ +W++MI +A +G +A +CF +M GV+PN +TFVG+LSAC H GLVE+G
Sbjct: 281 MRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEG 340
Query: 376 RWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQ 435
+ F +MK + +EP + HY C+VDLLSR E+ ++ MPM+P+V VWG L+GGC+
Sbjct: 341 KTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCE 400
Query: 436 MHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPG 495
G+VE+ E VA ++++LEP N Y+ L ++Y G + +R+R L+K ++V KIP
Sbjct: 401 KFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVA-KIPA 459
Query: 496 CS 497
S
Sbjct: 460 YS 461
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 168/495 (33%), Positives = 263/495 (53%), Gaps = 46/495 (9%)
Query: 21 LIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINN 80
++ C +++ L +IH QI S + S +I+ L+ S S +A + ++
Sbjct: 19 FLKLCSSIKHLLQIHGQIHLSSLQNDS---FIISELVRVSSLSLAKDLAFARTLLLHSSD 75
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGA 140
+N++ R Y+ D ++ +Y +M GI PN LTFPFL+K C ++
Sbjct: 76 STPSTWNMLSRGYSSSDSP-----VESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLT 130
Query: 141 SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYL 200
+G + +V+K GF DV+ GN+LI+LY TC S+ARK+FDE
Sbjct: 131 AGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDE----------------- 173
Query: 201 RNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIAS 260
M +N++SWNSI+T LV+ G E F EM PD+ T+
Sbjct: 174 --------------MTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVV 219
Query: 261 VLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKD 320
+LSAC G + GK VHS + +E + +GTALV+MY K G ++ A +FE M +K+
Sbjct: 220 LLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKN 277
Query: 321 TSAWTAMISVFALHGLGWKAFDCFLEM-ERAGVKPNHVTFVGLLSACAHSGLVEQGRWCF 379
W+AMI A +G +A F +M + + V+PN+VTF+G+L AC+H+GLV+ G F
Sbjct: 278 VWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYF 337
Query: 380 DVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGN 439
M++++ I+P + HY MVD+L RA +E+ I+ MP EPD VW LL C +H +
Sbjct: 338 HEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHD 397
Query: 440 VE---LGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGC 496
+ +GEKV LI+LEP + + + + +A + A +R ++KE ++ KKI G
Sbjct: 398 EDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKM-KKIAGE 456
Query: 497 SMIEINGVVQEFSAG 511
S +E+ G F +G
Sbjct: 457 SCLELGGSFHRFFSG 471
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/487 (33%), Positives = 256/487 (52%), Gaps = 50/487 (10%)
Query: 21 LIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINN 80
LI +CK+L+ LK+IH QI+T + S + +++LL S +YA ++ I N
Sbjct: 15 LISKCKSLQNLKQIHAQIIT---IGLSHHTYPLSKLLH---LSSTVCLSYALSILRQIPN 68
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLC---DGIFPNCLTFPFLIKGC---T 134
P + +YN +I + H A LY ++L + + PN T+P L K
Sbjct: 69 PSVFLYNTLISSIVSNHNSTQTHL--AFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDA 126
Query: 135 RWMDGASGEIVHAQVVKF--GFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTW 192
+W G +HA V+KF D F +L+ Y CG L AR LF+ I D+ TW
Sbjct: 127 QWHR--HGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATW 184
Query: 193 NSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVK 252
N+++ Y + +D+ +E L LF MQ V+
Sbjct: 185 NTLLAAYANSEEIDSD----------------------------EEVLLLFMRMQ---VR 213
Query: 253 PDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEI 312
P+++++ +++ +CA LG G W H Y+ +N + + +GT+L+++Y KCG + A ++
Sbjct: 214 PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKV 273
Query: 313 FEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLV 372
F+EM ++D S + AMI A+HG G + + + + G+ P+ TFV +SAC+HSGLV
Sbjct: 274 FDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLV 333
Query: 373 EQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLG 432
++G F+ MK VY IEP+V HY C+VDLL R+ +E+ I+ MP++P+ +W + LG
Sbjct: 334 DEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLG 393
Query: 433 GCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKK 492
Q HG+ E GE HL+ LE N Y+ L +IY R+ ++ R L+K+ RV K
Sbjct: 394 SSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKS 453
Query: 493 IPGCSMI 499
PG S +
Sbjct: 454 -PGISTL 459
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 165/529 (31%), Positives = 271/529 (51%), Gaps = 74/529 (13%)
Query: 70 YATNVF-HMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF-PNCLTFP 127
YA +F D + N MI+AY ++ R + + LY+ + + F P+ TF
Sbjct: 28 YARKLFDQRPQRDDSFLSNSMIKAY-----LETRQYPDSFALYRDLRKETCFAPDNFTFT 82
Query: 128 FLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVT 187
L K C+ M G +H+Q+ +FGF +D++ ++++Y G + AR FDE+P
Sbjct: 83 TLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHR 142
Query: 188 DVVTWNSMVIGYLRNGGLD--------------------------------NALDLFRKM 215
V+W +++ GY+R G LD +A LF +M
Sbjct: 143 SEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEM 202
Query: 216 NGKNIISW-------------------------------NSIITGLVQGGLAKEALELFH 244
K +I+W N++I G Q +E + LF
Sbjct: 203 THKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQ 262
Query: 245 EMQ-QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKC 303
EMQ S+ PD +TI SVL A + GA+ G+W H +++R ++ V + TA+++MY KC
Sbjct: 263 EMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKC 322
Query: 304 GLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLL 363
G +++A IF+EMPEK ++W AMI +AL+G A D F+ M KP+ +T + ++
Sbjct: 323 GEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM-MIEEKPDEITMLAVI 381
Query: 364 SACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPD 423
+AC H GLVE+GR F VM+ + L ++ HY CMVDLL RA E+ LI +MP EP+
Sbjct: 382 TACNHGGLVEEGRKWFHVMREMGL-NAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPN 440
Query: 424 VYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNL 483
+ + L C + ++E E++ ++LEP N Y+ L ++Y R+D ++N+
Sbjct: 441 GIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNV 500
Query: 484 LKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEM 532
+++ + +K++ GCS+IEIN +V EF +G ++ + + L+L L M
Sbjct: 501 MRKNQAKKEV-GCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHM 548
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 145/449 (32%), Positives = 241/449 (53%), Gaps = 38/449 (8%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
++K GS A VF + D + +I Y+ D C A++ + +ML G P
Sbjct: 105 YAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRP-----CDALLFFNQMLRFGYSP 159
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
N T +IK G G +H VK GF S+V G++L++LY GL+
Sbjct: 160 NEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLM------- 212
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
D+A +F + +N +SWN++I G + ++ALE
Sbjct: 213 ------------------------DDAQLVFDALESRNDVSWNALIAGHARRSGTEKALE 248
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
LF M + +P + AS+ AC+ G ++ GKWVH+Y+ ++G + G L++MY
Sbjct: 249 LFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYA 308
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
K G + A +IF+ + ++D +W ++++ +A HG G +A F EM R G++PN ++F+
Sbjct: 309 KSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLS 368
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME 421
+L+AC+HSGL+++G +++MK+ ++ P+ +HY +VDLL RA + ++ I MP+E
Sbjct: 369 VLTACSHSGLLDEGWHYYELMKKDGIV-PEAWHYVTVVDLLGRAGDLNRALRFIEEMPIE 427
Query: 422 PDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIR 481
P +W ALL C+MH N ELG A H+ +L+P + ++ L +IY GR++ A R+R
Sbjct: 428 PTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVR 487
Query: 482 NLLKERRVQKKIPGCSMIEINGVVQEFSA 510
+KE V+K+ P CS +EI + F A
Sbjct: 488 KKMKESGVKKE-PACSWVEIENAIHMFVA 515
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 44/278 (15%)
Query: 251 VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAF 310
+ D+ ++L C + G+ VH+++ ++ D+V+G L+NMY KCG +++A
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 311 EIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSG 370
++FE+MP++D WT +IS ++ H A F +M R G PN T ++ A A
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA--- 172
Query: 371 LVEQGRWCFDVMKRVYLI----EPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDV-- 424
+ R C + + + V+ + ++DL +R L D++ ++ ++ DV
Sbjct: 173 --AERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 425 --------------------------------YVWGALLGGCQMHGNVELGEKVALHLID 452
+ + +L G C G +E G+ V ++I
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 453 LEPHNHAFYMN-LCDIYGKAGRFDAAKRIRNLLKERRV 489
AF N L D+Y K+G A++I + L +R V
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV 328
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 275 bits (703), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 153/450 (34%), Positives = 241/450 (53%), Gaps = 44/450 (9%)
Query: 66 GSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLT 125
G A VF + D+ +MI A A + ++ ++ +++M DG+ +
Sbjct: 65 GKVLDARKVFDEMPKRDISGCVVMIGACA-----RNGYYQESLDFFREMYKDGLKLDAFI 119
Query: 126 FPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP 185
P L+K +D G+++H V+KF + SD F +SLI++Y G + NARK+F ++
Sbjct: 120 VPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLG 179
Query: 186 VTDVVTWNSMVIGYLRNGGLDNALDLFRKMN----------------------------- 216
D+V +N+M+ GY N D AL+L + M
Sbjct: 180 EQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSE 239
Query: 217 ----------GKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACA 266
+++SW SII+GLV ++A + F +M + P+ TI ++L AC
Sbjct: 240 ILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACT 299
Query: 267 QLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTA 326
L + HGK +H Y G+E + +AL++MYGKCG + +A +F + P+K T + +
Sbjct: 300 TLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNS 359
Query: 327 MISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVY 386
MI +A HGL KA + F +ME G K +H+TF +L+AC+H+GL + G+ F +M+ Y
Sbjct: 360 MIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKY 419
Query: 387 LIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKV 446
I P++ HYACMVDLL RA E+ +I++M MEPD++VWGALL C+ HGN+EL
Sbjct: 420 RIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIA 479
Query: 447 ALHLIDLEPHNHAFYMNLCDIYGKAGRFDA 476
A HL +LEP N + L +Y AG +++
Sbjct: 480 AKHLAELEPENSGNGLLLTSLYANAGSWES 509
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 149/335 (44%), Gaps = 36/335 (10%)
Query: 142 GEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLR 201
G ++HA +V G L+ Y+ CG + +ARK+FDE+P D+ M+ R
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 202 NGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASV 261
NG +E+L+ F EM + +K D + S+
Sbjct: 95 NG-------------------------------YYQESLDFFREMYKDGLKLDAFIVPSL 123
Query: 262 LSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDT 321
L A L + GK +H + + E D I ++L++MY K G V A ++F ++ E+D
Sbjct: 124 LKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDL 183
Query: 322 SAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDV 381
+ AMIS +A + +A + +M+ G+KP+ +T+ L+S +H E+ ++
Sbjct: 184 VVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILEL 243
Query: 382 MKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSM---PMEPDVYVWGALLGGCQMHG 438
M + +P V + ++ L +++ + M + P+ LL C
Sbjct: 244 MC-LDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLA 302
Query: 439 NVELGEKVALHLIDLEPHNHAFYMN-LCDIYGKAG 472
++ G+++ + + +H F + L D+YGK G
Sbjct: 303 YMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCG 337
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 160/359 (44%), Gaps = 54/359 (15%)
Query: 21 LIEQCKNL--REL-KRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHM 77
L++ +NL RE K IH +L + SD + +++ L+ +SK+G A VF
Sbjct: 123 LLKASRNLLDREFGKMIHCLVLKFS--YESDAF-IVSSLI--DMYSKFGEVGNARKVFSD 177
Query: 78 INNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRW- 136
+ DL V+N MI YA D+ A+ L K M GI P+ +T+ LI G +
Sbjct: 178 LGEQDLVVFNAMISGYANNSQADE-----ALNLVKDMKLLGIKPDVITWNALISGFSHMR 232
Query: 137 -------------MDGASGEIVHAQVVKFGFLSDVFNGNSL--INLYMTCGLLSNARKLF 181
+DG ++V + G + + N + +T GL N+ +
Sbjct: 233 NEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATII 292
Query: 182 DEIPVTDVVTW---------NSMVIG--------------YLRNGGLDNALDLFRKMNGK 218
+P + + S+V G Y + G + A+ LFRK K
Sbjct: 293 TLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKK 352
Query: 219 NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVH 278
+++NS+I GLA +A+ELF +M+ K D +T ++L+AC+ G D G+ +
Sbjct: 353 TTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLF 412
Query: 279 SYLR-RNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMP-EKDTSAWTAMISVFALHG 335
++ + I + +V++ G+ G + +A+E+ + M E D W A+++ HG
Sbjct: 413 LLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHG 471
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 109/250 (43%), Gaps = 46/250 (18%)
Query: 246 MQQISVKPDKITIASVLSACAQLGA------IDHGKWVHSYLRRNGIECDVVIGTALVNM 299
M+++++ P + S+ S + A G+ +H++L +GI I LV
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTF 60
Query: 300 YGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
Y +CG V A ++F+EMP++D S MI A +G ++ D F EM + G+K +
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIV 120
Query: 360 VGLLSACAHSGLVEQGRW--CFDVMKRVYLIEPQVYHYACMVDLLSR-------ARLF-- 408
LL A + E G+ C V+K Y E + + ++D+ S+ ++F
Sbjct: 121 PSLLKASRNLLDREFGKMIHCL-VLKFSY--ESDAFIVSSLIDMYSKFGEVGNARKVFSD 177
Query: 409 ----------------------DESVILIRSMPM---EPDVYVWGALLGG-CQMHGNVEL 442
DE++ L++ M + +PDV W AL+ G M ++
Sbjct: 178 LGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKV 237
Query: 443 GEKVALHLID 452
E + L +D
Sbjct: 238 SEILELMCLD 247
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 275 bits (703), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 275/522 (52%), Gaps = 46/522 (8%)
Query: 16 NALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVF 75
++L ++ C ++ + +H +++ S S ++ I L C + + G A +F
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVVKSV----SYRHGFIGDQLVGC-YLRLGHDVCAEKLF 89
Query: 76 HMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCD-GIFPNCLTFPFLIKGCT 134
+ DL +N +I Y+G G + F VL + M+ + G PN +TF +I C
Sbjct: 90 DEMPERDLVSWNSLISGYSGR-GYLGKCF---EVLSRMMISEVGFRPNEVTFLSMISACV 145
Query: 135 RWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNS 194
G +H V+KFG L +V N+ IN W
Sbjct: 146 YGGSKEEGRCIHGLVMKFGVLEEVKVVNAFIN-------------------------W-- 178
Query: 195 MVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPD 254
Y + G L ++ LF ++ KN++SWN++I +Q GLA++ L F+ +++ +PD
Sbjct: 179 ----YGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPD 234
Query: 255 KITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFE 314
+ T +VL +C +G + + +H + G + I TAL+++Y K G ++ + +F
Sbjct: 235 QATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFH 294
Query: 315 EMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQ 374
E+ D+ AWTAM++ +A HG G A F M G+ P+HVTF LL+AC+HSGLVE+
Sbjct: 295 EITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEE 354
Query: 375 GRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGC 434
G+ F+ M + Y I+P++ HY+CMVDLL R+ L ++ LI+ MPMEP VWGALLG C
Sbjct: 355 GKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGAC 414
Query: 435 QMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIP 494
+++ + +LG K A L +LEP + Y+ L +IY +G + A RIRNL+K++ + +
Sbjct: 415 RVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRA-S 473
Query: 495 GCSMIEINGVVQEFSAGG----SSELPMKDLVLILDRLCNEM 532
GCS IE + +F G SE K L I ++ +EM
Sbjct: 474 GCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEM 515
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 275 bits (702), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 158/472 (33%), Positives = 259/472 (54%), Gaps = 7/472 (1%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKML-CDGIF 120
++K + A VF ++ D+ +N MI Y+ +D C+ M YK ML C
Sbjct: 177 YTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFED---CKKM--YKAMLACSDFK 231
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
PN +T + + C + D G VH ++++ D+ N++I Y CG L AR L
Sbjct: 232 PNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARAL 291
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
FDE+ D VT+ +++ GY+ +G + A+ LF +M + +WN++I+GL+Q +E +
Sbjct: 292 FDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVI 351
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
F EM + +P+ +T++S+L + + GK +H++ RNG + ++ + T++++ Y
Sbjct: 352 NSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNY 411
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
K G + A +F+ ++ AWTA+I+ +A+HG A F +M+ G KP+ VT
Sbjct: 412 AKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLT 471
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
+LSA AHSG + + FD M Y IEP V HYACMV +LSRA +++ I MP+
Sbjct: 472 AVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPI 531
Query: 421 EPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
+P VWGALL G + G++E+ L ++EP N Y + ++Y +AGR++ A+ +
Sbjct: 532 DPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMV 591
Query: 481 RNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEM 532
RN +K R KKIPG S IE ++ F A SS K++ I++ L M
Sbjct: 592 RNKMK-RIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESM 642
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 180/426 (42%), Gaps = 89/426 (20%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKML------ 115
+++ F A +VF I + YN ++ AY + D A L+ +
Sbjct: 67 YTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFD-----AFSLFLSWIGSSCYS 121
Query: 116 CDGIFPNCLTFPFLIK---GCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCG 172
D P+ ++ ++K GC + G+ VH V++ GF SDVF GN +I Y C
Sbjct: 122 SDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCD 181
Query: 173 LLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQ 232
+ +ARK+FDE+ DVV+WNSM+ GY ++G ++ +++ M
Sbjct: 182 NIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAM----------------- 224
Query: 233 GGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVI 292
+ KP+ +T+ SV AC Q + G VH + N I+ D+ +
Sbjct: 225 -------------LACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSL 271
Query: 293 GTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEME---- 348
A++ Y KCG + A +F+EM EKD+ + A+IS + HGL +A F EME
Sbjct: 272 CNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGL 331
Query: 349 ---------------------------RAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDV 381
R G +PN VT LL + +S ++ G+
Sbjct: 332 STWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAF 391
Query: 382 MKR------VYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQ 435
R +Y+ + +YA + LL R+FD + + W A++
Sbjct: 392 AIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNC--------KDRSLIAWTAIITAYA 443
Query: 436 MHGNVE 441
+HG+ +
Sbjct: 444 VHGDSD 449
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 139/314 (44%), Gaps = 45/314 (14%)
Query: 145 VHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGG 204
+HA++V F D F + LI+ Y A +FDEI V + ++N+++I Y
Sbjct: 44 LHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREM 103
Query: 205 LDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASV--- 261
+A LF G + S + + +PD I+I+ V
Sbjct: 104 YFDAFSLFLSWIGSSCYSSD-------------------------AARPDSISISCVLKA 138
Query: 262 LSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDT 321
LS C + VH ++ R G + DV +G ++ Y KC ++ A ++F+EM E+D
Sbjct: 139 LSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDV 198
Query: 322 SAWTAMISVFALHGLGWKAFDCFLEMERA-----GVKPNHVTFVGLLSACAHSGLVEQGR 376
+W +MIS ++ G +F+ +M +A KPN VT + + AC S + G
Sbjct: 199 VSWNSMISGYSQSG----SFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFG- 253
Query: 377 WCFDVMKRVYLIEPQVYHYAC--MVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGC 434
+V K++ Q+ C ++ ++ D + L M E D +GA++ G
Sbjct: 254 --LEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMS-EKDSVTYGAIISGY 310
Query: 435 QMHGNVELGEKVAL 448
HG V+ E +AL
Sbjct: 311 MAHGLVK--EAMAL 322
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/432 (34%), Positives = 235/432 (54%), Gaps = 5/432 (1%)
Query: 106 RAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLI 165
A+V+++K+ G P+ +T ++ G ++H V+K G L D +++I
Sbjct: 235 EAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMI 294
Query: 166 NLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NII 221
++Y G + LF++ + + N+ + G RNG +D AL++F + N++
Sbjct: 295 DMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVV 354
Query: 222 SWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYL 281
SW SII G Q G EALELF EMQ VKP+ +TI S+L AC + A+ HG+ H +
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFA 414
Query: 282 RRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAF 341
R + +V +G+AL++MY KCG + + +F MP K+ W ++++ F++HG +
Sbjct: 415 VRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVM 474
Query: 342 DCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDL 401
F + R +KP+ ++F LLSAC GL ++G F +M Y I+P++ HY+CMV+L
Sbjct: 475 SIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNL 534
Query: 402 LSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFY 461
L RA E+ LI+ MP EPD VWGALL C++ NV+L E A L LEP N Y
Sbjct: 535 LGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTY 594
Query: 462 MNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDL 521
+ L +IY G + IRN ++ + KK PGCS I++ V AG S + +
Sbjct: 595 VLLSNIYAAKGMWTEVDSIRNKMESLGL-KKNPGCSWIQVKNRVYTLLAGDKSHPQIDQI 653
Query: 522 VLILDRLCNEMK 533
+D + EM+
Sbjct: 654 TEKMDEISKEMR 665
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 207/420 (49%), Gaps = 46/420 (10%)
Query: 61 SFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF 120
S+S Y F A V I +P + ++ +I A + F +++ ++ +M G+
Sbjct: 59 SYSNYNCFNDADLVLQSIPDPTIYSFSSLIYAL-----TKAKLFTQSIGVFSRMFSHGLI 113
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
P+ P L K C G+ +H G D F S+ ++YM CG + +ARK+
Sbjct: 114 PDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKV 173
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLA 236
FD + DVVT ++++ Y R G L+ + + +M NI+SWN I++G + G
Sbjct: 174 FDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYH 233
Query: 237 KEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTAL 296
KEA+ +F ++ + PD++T++SVL + ++ G+ +H Y+ + G+ D + +A+
Sbjct: 234 KEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAM 293
Query: 297 VNMYGKC-------------------------------GLVQQAFEIFEEMPEK----DT 321
++MYGK GLV +A E+FE E+ +
Sbjct: 294 IDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNV 353
Query: 322 SAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDV 381
+WT++I+ A +G +A + F EM+ AGVKPNHVT +L AC + + GR
Sbjct: 354 VSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGF 413
Query: 382 MKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVE 441
RV+L++ V+ + ++D+ ++ + S I+ MP + ++ W +L+ G MHG +
Sbjct: 414 AVRVHLLD-NVHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFSMHGKAK 471
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/460 (33%), Positives = 243/460 (52%), Gaps = 37/460 (8%)
Query: 74 VFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGC 133
VF ++ D+ YN +I YA +D A+ + ++M + P+ T ++
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYED-----ALRMVREMGTTDLKPDSFTLSSVLPIF 252
Query: 134 TRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWN 193
+ ++D G+ +H V++ G SDV+ G+SL+++Y + ++ ++F +
Sbjct: 253 SEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL--------- 303
Query: 194 SMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKP 253
Y R+G ISWNS++ G VQ G EAL LF +M VKP
Sbjct: 304 -----YCRDG-----------------ISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKP 341
Query: 254 DKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIF 313
+ +SV+ ACA L + GK +H Y+ R G ++ I +ALV+MY KCG ++ A +IF
Sbjct: 342 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIF 401
Query: 314 EEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVE 373
+ M D +WTA+I ALHG G +A F EM+R GVKPN V FV +L+AC+H GLV+
Sbjct: 402 DRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD 461
Query: 374 QGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGG 433
+ F+ M +VY + ++ HYA + DLL RA +E+ I M +EP VW LL
Sbjct: 462 EAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSS 521
Query: 434 CQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKI 493
C +H N+EL EKVA + ++ N Y+ +C++Y GR+ ++R ++++ ++KK
Sbjct: 522 CSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKK- 580
Query: 494 PGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
P CS IE+ F +G S M + L + +M+
Sbjct: 581 PACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQME 620
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 215/442 (48%), Gaps = 30/442 (6%)
Query: 9 SKSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSF 68
S S L L + + K+ + K++H Q + + +L H ++ S ++
Sbjct: 2 SSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLS-----HTSASIVISI-YTNLKLL 55
Query: 69 TYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPF 128
A +F + +P + + +IR + D F +A+ + +M G P+ FP
Sbjct: 56 HEALLLFKTLKSPPVLAWKSVIRCF-----TDQSLFSKALASFVEMRASGRCPDHNVFPS 110
Query: 129 LIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLY---MTCGLLSNARKLFDEIP 185
++K CT MD GE VH +V+ G D++ GN+L+N+Y + G + +FDE+P
Sbjct: 111 VLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMP 170
Query: 186 VTDVVTWNSMVIGY--LRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELF 243
+ + V + G+D+ +F M K+++S+N+II G Q G+ ++AL +
Sbjct: 171 QRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMV 230
Query: 244 HEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKC 303
EM +KPD T++SVL ++ + GK +H Y+ R GI+ DV IG++LV+MY K
Sbjct: 231 REMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKS 290
Query: 304 GLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLL 363
++ + +F + +D +W ++++ + +G +A F +M A VKP V F ++
Sbjct: 291 ARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVI 350
Query: 364 SACAHSGLVEQGRWCFDVMKR------VYLIEPQVYHYACMVDLLSRARLFDESVILIRS 417
ACAH + G+ + R +++ V Y+ ++ + ++FD +L
Sbjct: 351 PACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL--- 407
Query: 418 MPMEPDVYVWGALLGGCQMHGN 439
D W A++ G +HG+
Sbjct: 408 -----DEVSWTAIIMGHALHGH 424
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 132/275 (48%), Gaps = 38/275 (13%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
++K + VF + D +N ++ Y V + + A+ L+++M+ + P
Sbjct: 287 YAKSARIEDSERVFSRLYCRDGISWNSLVAGY-----VQNGRYNEALRLFRQMVTAKVKP 341
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ F +I C G+ +H V++ GF S++F ++L+++Y CG + ARK+F
Sbjct: 342 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIF 401
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
D + V D V+W ++++G+ +G EA+
Sbjct: 402 DRMNVLDEVSWTAIIMGHALHGH-------------------------------GHEAVS 430
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHG-KWVHSYLRRNGIECDVVIGTALVNMY 300
LF EM++ VKP+++ +VL+AC+ +G +D + +S + G+ ++ A+ ++
Sbjct: 431 LFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLL 490
Query: 301 GKCGLVQQAFEIFEEM-PEKDTSAWTAMISVFALH 334
G+ G +++A+ +M E S W+ ++S ++H
Sbjct: 491 GRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 164/474 (34%), Positives = 249/474 (52%), Gaps = 39/474 (8%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+S G A +F I + + + + Y RH A+ L+KKM+ G+ P
Sbjct: 156 YSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYT----TSGRHR-EAIDLFKKMVEMGVKP 210
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ ++ C D SGE + + + + F +L+NLY CG + AR +F
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVF 270
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
D SMV K+I++W+++I G KE +E
Sbjct: 271 D-----------SMV--------------------EKDIVTWSTMIQGYASNSFPKEGIE 299
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
LF +M Q ++KPD+ +I LS+CA LGA+D G+W S + R+ ++ + AL++MY
Sbjct: 300 LFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYA 359
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KCG + + FE+F+EM EKD A IS A +G +F F + E+ G+ P+ TF+G
Sbjct: 360 KCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLG 419
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME 421
LL C H+GL++ G F+ + VY ++ V HY CMVDL RA + D++ LI MPM
Sbjct: 420 LLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMR 479
Query: 422 PDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIR 481
P+ VWGALL GC++ + +L E V LI LEP N Y+ L +IY GR+D A +R
Sbjct: 480 PNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVR 539
Query: 482 NLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLI-LDRLCNEMKI 534
+++ ++ + KKIPG S IE+ G V EF A S P+ D + L+ L NEM++
Sbjct: 540 DMMNKKGM-KKIPGYSWIELEGKVHEFLADDKSH-PLSDKIYAKLEDLGNEMRL 591
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 220/465 (47%), Gaps = 46/465 (9%)
Query: 4 ISLIESKSLTLK-NALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSF 62
+S++ S T K + LI + LK+IH ++ N H L+ LL F
Sbjct: 1 MSIVTVPSATSKVQQIKTLISVACTVNHLKQIHVSLI---NHHLHHDTFLVNLLLKRTLF 57
Query: 63 SKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPN 122
+ ++Y +F P++ +YN +I + V++ F + L+ + G++ +
Sbjct: 58 FRQTKYSYL--LFSHTQFPNIFLYNSLINGF-----VNNHLFHETLDLFLSIRKHGLYLH 110
Query: 123 CLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFD 182
TFP ++K CTR G +H+ VVK GF DV SL+++Y
Sbjct: 111 GFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSG------------ 158
Query: 183 EIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALEL 242
+G L++A LF ++ +++++W ++ +G G +EA++L
Sbjct: 159 -------------------SGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDL 199
Query: 243 FHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGK 302
F +M ++ VKPD I VLSAC +G +D G+W+ Y+ ++ + + T LVN+Y K
Sbjct: 200 FKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAK 259
Query: 303 CGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGL 362
CG +++A +F+ M EKD W+ MI +A + + + FL+M + +KP+ + VG
Sbjct: 260 CGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGF 319
Query: 363 LSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEP 422
LS+CA G ++ G W ++ R + ++ ++D+ ++ + + M E
Sbjct: 320 LSSCASLGALDLGEWGISLIDRHEFL-TNLFMANALIDMYAKCGAMARGFEVFKEMK-EK 377
Query: 423 DVYVWGALLGGCQMHGNVELGEKV--ALHLIDLEPHNHAFYMNLC 465
D+ + A + G +G+V+L V + + P F LC
Sbjct: 378 DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLC 422
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/472 (32%), Positives = 263/472 (55%), Gaps = 23/472 (4%)
Query: 32 KRIHTQILTS---PNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNI 88
K+IH I+ + P+L+ S + LI L K G +YA VF + P L YN
Sbjct: 54 KKIHADIIKTGFQPDLNISIKL-LILHL-------KCGCLSYARQVFDELPKPTLSAYNY 105
Query: 89 MIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIK-----GCTRWMDGASGE 143
MI Y V + ++L ++M G + T ++K G T + +
Sbjct: 106 MISGYLKHGLVKE-----LLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCR 160
Query: 144 IVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNG 203
+VHA+++K D +L++ Y+ G L +AR +F+ + +VV SM+ GY+ G
Sbjct: 161 LVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQG 220
Query: 204 GLDNALDLFRKMNGKNIISWNSIITGLVQGG-LAKEALELFHEMQQISVKPDKITIASVL 262
+++A ++F K+I+ +N+++ G + G AK +++++ MQ+ P+ T ASV+
Sbjct: 221 FVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVI 280
Query: 263 SACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTS 322
AC+ L + + G+ VH+ + ++G+ + +G++L++MY KCG + A +F++M EK+
Sbjct: 281 GACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVF 340
Query: 323 AWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVM 382
+WT+MI + +G +A + F M+ ++PN+VTF+G LSAC+HSGLV++G F+ M
Sbjct: 341 SWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESM 400
Query: 383 KRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVEL 442
+R Y ++P++ HYAC+VDL+ RA +++ R+MP PD +W ALL C +HGNVEL
Sbjct: 401 QRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVEL 460
Query: 443 GEKVALHLIDLEPHNH-AFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKI 493
A L L Y+ L ++Y ++D +IR ++K RR+ K I
Sbjct: 461 ASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTI 512
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 177/393 (45%), Gaps = 51/393 (12%)
Query: 141 SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYL 200
+G+ +HA ++K GF D+ L+ L++ CG LS AR++FDE+P + +N M+ GYL
Sbjct: 52 AGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYL 111
Query: 201 RNGGLDNALDLFRKMNGKNIISWNSIITGLVQGG--------LAKEALELFH-EMQQISV 251
++G + L L ++M+ + ++ +++ L + L H + + V
Sbjct: 112 KHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDV 171
Query: 252 KPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFE 311
+ D + I +++ + G ++ + V ++ + C T++++ Y G V+ A E
Sbjct: 172 ELDDVLITALVDTYVKSGKLESARTVFETMKDENVVC----CTSMISGYMNQGFVEDAEE 227
Query: 312 IFEEMPEKDTSAWTAMISVFALHG-LGWKAFDCFLEMERAGVKPNHVTFVGLLSACA--- 367
IF KD + AM+ F+ G ++ D ++ M+RAG PN TF ++ AC+
Sbjct: 228 IFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLT 287
Query: 368 --------HSGLVEQGRWCFDVM-----------------KRVY--LIEPQVYHYACMVD 400
H+ +++ G + M +RV+ + E V+ + M+D
Sbjct: 288 SHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMID 347
Query: 401 LLSRARLFDESVILIRSMP---MEPDVYVWGALLGGCQMHGNVELGEKVALHL---IDLE 454
+ +E++ L M +EP+ + L C G V+ G ++ + ++
Sbjct: 348 GYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMK 407
Query: 455 PHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKER 487
P Y + D+ G+AG + A + ER
Sbjct: 408 P-KMEHYACIVDLMGRAGDLNKAFEFARAMPER 439
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 125/311 (40%), Gaps = 72/311 (23%)
Query: 250 SVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQA 309
S+ P K IA L A GK +H+ + + G + D+ I L+ ++ KCG + A
Sbjct: 30 SLSPAKY-IAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYA 88
Query: 310 FEIFEEMPEKDTSAWTAMISVFALHGL--------------GWKAFDCFLEME------- 348
++F+E+P+ SA+ MIS + HGL G KA L M
Sbjct: 89 RQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSR 148
Query: 349 -------------------RAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLI- 388
+ V+ + V L+ SG +E R F+ MK ++
Sbjct: 149 GSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVC 208
Query: 389 ----------------EPQVYH---------YACMVDLLSR----ARLFDESVILIRSMP 419
++++ Y MV+ SR A+ + I ++
Sbjct: 209 CTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAG 268
Query: 420 MEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNH-AFYMNLCDIYGKAGRFDAAK 478
P++ + +++G C + + E+G++V ++ + H +L D+Y K G + A+
Sbjct: 269 FHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDAR 328
Query: 479 RIRNLLKERRV 489
R+ + ++E+ V
Sbjct: 329 RVFDQMQEKNV 339
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/495 (32%), Positives = 262/495 (52%), Gaps = 16/495 (3%)
Query: 20 RLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMIN 79
+L+E ++ L ++H +++TS N S RLL S S ++G +Y +++ I
Sbjct: 27 KLVEDSNSITHLFQVHARLITSGNFWDSS---WAIRLLKSSS--RFGDSSYTVSIYRSIG 81
Query: 80 NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDG 139
L N + +AY +A+ Y +L G P+ TF LI +
Sbjct: 82 K--LYCANPVFKAYLVSSSPK-----QALGFYFDILRFGFVPDSYTFVSLISCIEKTCCV 134
Query: 140 ASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGY 199
SG++ H Q +K G + NSL+++Y CG L A+KLF EIP D+V+WNS++ G
Sbjct: 135 DSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGM 194
Query: 200 LRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIA 259
+RNG + A LF +M KNIISWN +I+ + ++ LF EM + + ++ T+
Sbjct: 195 VRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLV 254
Query: 260 SVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK 319
+L+AC + + G+ VH+ L R + VVI TAL++MYGKC V A IF+ + +
Sbjct: 255 LLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIR 314
Query: 320 DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCF 379
+ W MI LHG + F M ++P+ VTFVG+L CA +GLV QG+ +
Sbjct: 315 NKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYY 374
Query: 380 DVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME---PDVYVWGALLGGCQM 436
+M + I+P H CM +L S A +E+ ++++P E P+ W LL +
Sbjct: 375 SLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRF 434
Query: 437 HGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGC 496
GN LGE +A LI+ +P N+ +Y L +IY GR++ R+R ++KER++ +IPGC
Sbjct: 435 TGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKI-GRIPGC 493
Query: 497 SMIEINGVVQEFSAG 511
++++ +V G
Sbjct: 494 GLVDLKEIVHGLRLG 508
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 170/520 (32%), Positives = 260/520 (50%), Gaps = 43/520 (8%)
Query: 52 LITRLLFSCS-----FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCR 106
+ + + SCS + K G A ++F + ++ + MI Y +D
Sbjct: 203 MAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFED----- 257
Query: 107 AMVLYKKMLCDG-IFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLI 165
L+ +M +G + N T + K C ++ G +H V + D+F GNSL+
Sbjct: 258 GFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLM 317
Query: 166 NLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNS 225
++Y G + A+ +F + D V+WNS++ G ++ + A +LF KM GK+++SW
Sbjct: 318 SMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTD 377
Query: 226 IITGL-------------------------------VQGGLAKEALELFHEMQQISVKPD 254
+I G V G +EAL FH+M Q V P+
Sbjct: 378 MIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPN 437
Query: 255 KITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFE 314
T +SVLSA A L + G +H + + I D+ + +LV+MY KCG A++IF
Sbjct: 438 SYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFS 497
Query: 315 EMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQ 374
+ E + ++ MIS ++ +G G KA F +E +G +PN VTF+ LLSAC H G V+
Sbjct: 498 CISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDL 557
Query: 375 GRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGC 434
G F MK Y IEP HYACMVDLL R+ L D++ LI +MP +P VWG+LL
Sbjct: 558 GWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSAS 617
Query: 435 QMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIP 494
+ H V+L E A LI+LEP + Y+ L +Y G+ RI N+ K +R+ KK P
Sbjct: 618 KTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRI-KKDP 676
Query: 495 GCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMKI 534
G S I + G V F AG S+L ++++ L + EM++
Sbjct: 677 GSSWIILKGEVHNFLAGDESQLNLEEIGFTLKMIRKEMEL 716
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 141/555 (25%), Positives = 227/555 (40%), Gaps = 123/555 (22%)
Query: 27 NLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVY 86
NL+E + I Q+ +++ + ++++ G + A VF + Y
Sbjct: 65 NLQEAEAIFRQM---------SNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSY 115
Query: 87 NIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVH 146
N MI A ++ C Y+ + CD N +++ +I G R E ++
Sbjct: 116 NAMITAMI-------KNKCDLGKAYE-LFCDIPEKNAVSYATMITGFVRAGRFDEAEFLY 167
Query: 147 AQV-VKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGL 205
A+ VKF D N L++ Y+ G + A ++F + V +VV+ +SMV GY + G +
Sbjct: 168 AETPVKF---RDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRI 224
Query: 206 DNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEM-QQISVKPDKITIASVLSA 264
+A LF +M +N+I+W ++I G + G ++ LF M Q+ VK + T+A + A
Sbjct: 225 VDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKA 284
Query: 265 CAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGK---------------------- 302
C G +H + R +E D+ +G +L++MY K
Sbjct: 285 CRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSW 344
Query: 303 ----CGLVQ-----QAFEIFEE-------------------------------MPEKDTS 322
GLVQ +A+E+FE+ MPEKD
Sbjct: 345 NSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNI 404
Query: 323 AWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAH-----SGLVEQGR- 376
WTAMIS F +G +A F +M + V PN TF +LSA A GL GR
Sbjct: 405 TWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRV 464
Query: 377 ------------------WCF-----DVMKRVYLI-EPQVYHYACMVDLLSRARLFDESV 412
+C D K I EP + Y M+ S +++
Sbjct: 465 VKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKAL 524
Query: 413 IL---IRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHL---IDLEP-HNHAFYMNLC 465
L + S EP+ + ALL C G V+LG K + ++EP +H Y +
Sbjct: 525 KLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDH--YACMV 582
Query: 466 DIYGKAGRFDAAKRI 480
D+ G++G D A +
Sbjct: 583 DLLGRSGLLDDASNL 597
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 139/325 (42%), Gaps = 43/325 (13%)
Query: 158 VFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNG 217
+F NS I+ + G L A +F ++ +V+W +M+ Y NG + A +F +M
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 218 KNIISWNSIITGLVQG--GLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDH-- 273
+ S+N++IT +++ L K A ELF ++ + + ++ A++++ + G D
Sbjct: 110 RVTTSYNAMITAMIKNKCDLGK-AYELFCDIPE----KNAVSYATMITGFVRAGRFDEAE 164
Query: 274 --------------------------GKWVHSYLRRNGIEC-DVVIGTALVNMYGKCGLV 306
GKW + G+ +VV +++V+ Y K G +
Sbjct: 165 FLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRI 224
Query: 307 QQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAG-VKPNHVTFVGLLSA 365
A +F+ M E++ WTAMI + G F FL M + G VK N T + A
Sbjct: 225 VDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKA 284
Query: 366 CAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVY 425
C +G ++ R+ L E ++ ++ + S+ E+ + M D
Sbjct: 285 CRDFVRYREGSQIHGLVSRMPL-EFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK-NKDSV 342
Query: 426 VWGALLGGC----QMHGNVELGEKV 446
W +L+ G Q+ EL EK+
Sbjct: 343 SWNSLITGLVQRKQISEAYELFEKM 367
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 268 bits (685), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 171/520 (32%), Positives = 265/520 (50%), Gaps = 43/520 (8%)
Query: 17 ALSRLIEQCKNLREL---KRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATN 73
A S ++ C +L L ++H + + NL +D Y +T L ++K T A
Sbjct: 352 ACSSILTSCASLHALGFGTQVHAYTIKA-NL-GNDSY--VTNSLIDM-YAKCDCLTDARK 406
Query: 74 VFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGC 133
VF + D+ ++N MI Y+ + + H A+ +++ M I P+ LTF L++
Sbjct: 407 VFDIFAAADVVLFNAMIEGYSRLGTQWELH--EALNIFRDMRFRLIRPSLLTFVSLLRAS 464
Query: 134 TRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWN 193
+ +H + K+G D+F G++LI++Y C L ++R +FDE+ V D+V WN
Sbjct: 465 ASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWN 524
Query: 194 SMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKP 253
SM GY VQ +EAL LF E+Q +P
Sbjct: 525 SMFAGY-------------------------------VQQSENEEALNLFLELQLSRERP 553
Query: 254 DKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIF 313
D+ T A++++A L ++ G+ H L + G+EC+ I AL++MY KCG + A + F
Sbjct: 554 DEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAF 613
Query: 314 EEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVE 373
+ +D W ++IS +A HG G KA +M G++PN++TFVG+LSAC+H+GLVE
Sbjct: 614 DSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVE 673
Query: 374 QGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGG 433
G F++M R + IEP+ HY CMV LL RA +++ LI MP +P VW +LL G
Sbjct: 674 DGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSG 732
Query: 434 CQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKI 493
C GNVEL E A I +P + + L +IY G + AK++R +K V K+
Sbjct: 733 CAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKE- 791
Query: 494 PGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
PG S I IN V F + S + +LD L +++
Sbjct: 792 PGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 118/502 (23%), Positives = 213/502 (42%), Gaps = 47/502 (9%)
Query: 18 LSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHM 77
LS I+ C L R L S + S + L + K G+ YA VF
Sbjct: 149 LSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDA 208
Query: 78 INNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWM 137
+ + MI M R + ++ L+ +++ D + P+ ++ C+
Sbjct: 209 LPEKSTVTWTTMISGCVKMG----RSYV-SLQLFYQLMEDNVVPDGYILSTVLSACSILP 263
Query: 138 DGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVI 197
G+ +HA ++++G D N LI+ Y+ CG + A KLF
Sbjct: 264 FLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLF---------------- 307
Query: 198 GYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKIT 257
NG M KNIISW ++++G Q L KEA+ELF M + +KPD
Sbjct: 308 ----NG-----------MPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYA 352
Query: 258 IASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMP 317
+S+L++CA L A+ G VH+Y + + D + +L++MY KC + A ++F+
Sbjct: 353 CSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFA 412
Query: 318 EKDTSAWTAMISVFALHGLGW---KAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQ 374
D + AMI ++ G W +A + F +M ++P+ +TFV LL A A +
Sbjct: 413 AADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGL 472
Query: 375 GRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGC 434
+ +M + Y + ++ + ++D+ S +S ++ M ++ D+ +W ++ G
Sbjct: 473 SKQIHGLMFK-YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAGY 530
Query: 435 QMHGNVELGEKVALHL-IDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKI 493
E + L L + E + + N+ G + L +R ++
Sbjct: 531 VQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLE--- 587
Query: 494 PGCSMIEINGVVQEFSAGGSSE 515
C+ N ++ ++ GS E
Sbjct: 588 --CNPYITNALLDMYAKCGSPE 607
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 199/457 (43%), Gaps = 73/457 (15%)
Query: 61 SFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF 120
S+ K G A +F+ + N ++ + ++ Y + AM L+ M G+
Sbjct: 293 SYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYK-----QNALHKEAMELFTSMSKFGLK 347
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
P+ ++ C G VHA +K +D + NSLI++Y C L++ARK+
Sbjct: 348 PDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKV 407
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
FD DVV +N+M+ GY R G W EAL
Sbjct: 408 FDIFAAADVVLFNAMIEGYSRLG-----------------TQWE-----------LHEAL 439
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
+F +M+ ++P +T S+L A A L ++ K +H + + G+ D+ G+AL+++Y
Sbjct: 440 NIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVY 499
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
C ++ + +F+EM KD W +M + + +A + FLE++ + +P+ TF
Sbjct: 500 SNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFA 559
Query: 361 GLLSACAHSGLVEQGR-WCFDVMKRVYLIEPQVYHYACMVDLLSRA-------RLFDE-- 410
+++A + V+ G+ + ++KR P + + ++D+ ++ + FD
Sbjct: 560 NMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN--ALLDMYAKCGSPEDAHKAFDSAA 617
Query: 411 --------SVI-----------------LIRSMPMEPDVYVWGALLGGCQMHGNVELG-E 444
SVI + S +EP+ + +L C G VE G +
Sbjct: 618 SRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLK 677
Query: 445 KVALHL-IDLEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
+ L L +EP Y+ + + G+AGR + A+ +
Sbjct: 678 QFELMLRFGIEPETE-HYVCMVSLLGRAGRLNKAREL 713
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 165/381 (43%), Gaps = 74/381 (19%)
Query: 144 IVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNG 203
+VH Q++ +G D + N LINLY R G
Sbjct: 65 VVHGQIIVWGLELDTYLSNILINLYS-------------------------------RAG 93
Query: 204 GLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISV-KPDKITIASVL 262
G+ A +F KM +N++SW+++++ G+ +E+L +F E + P++ ++S +
Sbjct: 94 GMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFI 153
Query: 263 SACAQLGAIDHGKW----VHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPE 318
AC+ L G+W + S+L ++G + DV +GT L++ Y K G + A +F+ +PE
Sbjct: 154 QACSGLDG--RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPE 211
Query: 319 KDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWC 378
K T WT MIS G + + F ++ V P+ +LSAC+ +E G+
Sbjct: 212 KSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQI 271
Query: 379 FDVMKRVYLIEPQVYHYACMVD-------LLSRARLFD---------------------- 409
+ R Y +E ++D +++ +LF+
Sbjct: 272 HAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNAL 330
Query: 410 --ESVILIRSMP---MEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMN- 463
E++ L SM ++PD+Y ++L C + G +V + I N ++ N
Sbjct: 331 HKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNS 390
Query: 464 LCDIYGKAGRFDAAKRIRNLL 484
L D+Y K A+++ ++
Sbjct: 391 LIDMYAKCDCLTDARKVFDIF 411
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 151/396 (38%), Positives = 229/396 (57%), Gaps = 6/396 (1%)
Query: 106 RAMVLYKKMLCDGIFP-NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSL 164
+A+ L+ +M P + F +K C G VHA VK FLS+ F G +L
Sbjct: 30 QALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCAL 89
Query: 165 INLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMN-GKNIISW 223
+++Y C +S+ARKLFDEIP + V WN+M+ Y G + A++L+ M+ N S+
Sbjct: 90 LDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSF 149
Query: 224 NSIITGLV--QGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYL 281
N+II GLV + G + A+E + +M + KP+ IT+ +++SAC+ +GA K +HSY
Sbjct: 150 NAIIKGLVGTEDG-SYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYA 208
Query: 282 RRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAF 341
RN IE + + LV YG+CG + +F+ M ++D AW+++IS +ALHG A
Sbjct: 209 FRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESAL 268
Query: 342 DCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDL 401
F EME A V P+ + F+ +L AC+H+GL ++ F M+ Y + HY+C+VD+
Sbjct: 269 KTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDV 328
Query: 402 LSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFY 461
LSR F+E+ +I++MP +P WGALLG C+ +G +EL E A L+ +EP N A Y
Sbjct: 329 LSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANY 388
Query: 462 MNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCS 497
+ L IY GR + A+R+R +KE V K PG S
Sbjct: 389 VLLGKIYMSVGRQEEAERLRLKMKESGV-KVSPGSS 423
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 113/257 (43%), Gaps = 51/257 (19%)
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGA 140
P+ +N +I+ G+ G +D + RA+ Y+KM+ PN +T L+ C+ GA
Sbjct: 144 PNESSFNAIIK---GLVGTEDGSY-RAIEFYRKMIEFRFKPNLITLLALVSACSAI--GA 197
Query: 141 SGEIVHAQVVKFGFLSDVFN--GNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIG 198
I F L + + L+ Y CG + + +FD + DVV W+S++
Sbjct: 198 FRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISA 257
Query: 199 YLRNGGLDNALDLFRKMNGKNI----ISWNSIITGLVQGGLAKEALELFHEMQQISVKPD 254
Y +G ++AL F++M + I++ +++ GLA EAL F MQ
Sbjct: 258 YALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQG------ 311
Query: 255 KITIASVLSACAQLGAIDHGKWVHSYLR--RNGIECDVVIGTALVNMYGKCGLVQQAFEI 312
D+G LR ++ C LV++ + G ++A+++
Sbjct: 312 -----------------DYG------LRASKDHYSC-------LVDVLSRVGRFEEAYKV 341
Query: 313 FEEMPEKDTS-AWTAMI 328
+ MPEK T+ W A++
Sbjct: 342 IQAMPEKPTAKTWGALL 358
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/382 (36%), Positives = 225/382 (58%), Gaps = 34/382 (8%)
Query: 142 GEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLR 201
GE +H+ V++ GF S ++ NSL++LY CG +++A K+FD
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFD------------------- 47
Query: 202 NGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASV 261
KM K++++WNS+I G + G +EAL L+ EM +KPD TI S+
Sbjct: 48 ------------KMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSL 95
Query: 262 LSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDT 321
LSACA++GA+ GK VH Y+ + G+ ++ L+++Y +CG V++A +F+EM +K++
Sbjct: 96 LSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 155
Query: 322 SAWTAMISVFALHGLGWKAFDCFLEMERA-GVKPNHVTFVGLLSACAHSGLVEQGRWCFD 380
+WT++I A++G G +A + F ME G+ P +TFVG+L AC+H G+V++G F
Sbjct: 156 VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFR 215
Query: 381 VMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNV 440
M+ Y IEP++ H+ CMVDLL+RA ++ I+SMPM+P+V +W LLG C +HG+
Sbjct: 216 RMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDS 275
Query: 441 ELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIE 500
+L E + ++ LEP++ Y+ L ++Y R+ ++IR + V KK+PG S++E
Sbjct: 276 DLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGV-KKVPGHSLVE 334
Query: 501 INGVVQEFSAGGSSELPMKDLV 522
+ V EF G S P D +
Sbjct: 335 VGNRVHEFLMGDKSH-PQSDAI 355
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 140/328 (42%), Gaps = 52/328 (15%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
++ G A VF + DL +N +I +A ++ A+ LY +M GI P
Sbjct: 33 YANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE-----ALALYTEMNSKGIKP 87
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ T L+ C + G+ VH ++K G ++ + N L++LY CG + A+ LF
Sbjct: 88 DGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLF 147
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
DE+ + V+W S+++G N G KEA+E
Sbjct: 148 DEMVDKNSVSWTSLIVGLAVN-------------------------------GFGKEAIE 176
Query: 242 LFHEMQQIS-VKPDKITIASVLSACAQLGAIDHGKWVHSYLRR----NGIECDVVIGTAL 296
LF M+ + P +IT +L AC+ G + G Y RR IE + +
Sbjct: 177 LFKYMESTEGLLPCEITFVGILYACSHCGMVKEG---FEYFRRMREEYKIEPRIEHFGCM 233
Query: 297 VNMYGKCGLVQQAFEIFEEMP-EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPN 355
V++ + G V++A+E + MP + + W ++ +HG A F ++ ++PN
Sbjct: 234 VDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE--FARIQILQLEPN 291
Query: 356 HVTFVGLLSACAHSGLVEQGRWCFDVMK 383
H LLS S + RW DV K
Sbjct: 292 HSGDYVLLSNMYAS----EQRWS-DVQK 314
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 230/399 (57%), Gaps = 9/399 (2%)
Query: 142 GEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLR 201
E VH V+K GF + + N+LI++Y G + +A LF +I + +WNS++ ++
Sbjct: 313 AEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVD 372
Query: 202 NGGLDNALDLFRKMN--------GKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKP 253
G LD AL LF ++ N+++W S+I G G ++LE F +MQ V
Sbjct: 373 AGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLA 432
Query: 254 DKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIF 313
+ +TI +LS CA+L A++ G+ +H ++ R + ++++ ALVNMY KCGL+ + +F
Sbjct: 433 NSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVF 492
Query: 314 EEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVE 373
E + +KD +W ++I + +HG KA F M +G P+ + V +LSAC+H+GLVE
Sbjct: 493 EAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVE 552
Query: 374 QGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGG 433
+GR F M + + +EPQ HYAC+VDLL R E+ ++++MPMEP V V GALL
Sbjct: 553 KGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNS 612
Query: 434 CQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKI 493
C+MH NV++ E +A L LEP YM L +IY GR++ + +R L K ++ KK+
Sbjct: 613 CRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAK-KKDLKKV 671
Query: 494 PGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEM 532
G S IE+ +FS+G + + + +L+ L + M
Sbjct: 672 SGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHM 710
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/483 (22%), Positives = 212/483 (43%), Gaps = 57/483 (11%)
Query: 5 SLIESKSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSK 64
SL + +L + L+ C ++ +++H Q+L S + S L L+ +++
Sbjct: 46 SLTSNNDQSLFHYFDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGS--LAANLI--SVYAR 101
Query: 65 YGSFTYATNVFHMINN---PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
G A NVF ++ DLR++N +++A V + A+ LY+ M G+
Sbjct: 102 LGLLLDARNVFETVSLVLLSDLRLWNSILKA-----NVSHGLYENALELYRGMRQRGLTG 156
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ P +++ C H QV++ G ++ N L+ LY G + +A LF
Sbjct: 157 DGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLF 216
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNI----ISWNSIITGLVQGGLAK 237
E+PV + ++WN M+ G+ + ++A+ +F M + ++W S+++ Q G +
Sbjct: 217 VEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFE 276
Query: 238 EALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALV 297
+ L+ FH M+ +A S CA+L A+ + VH Y+ + G E + AL+
Sbjct: 277 DVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALI 336
Query: 298 NMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFA------------------------- 332
++YGK G V+ A +F ++ K +W ++I+ F
Sbjct: 337 HVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVK 396
Query: 333 --------------LHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWC 378
+ G G + + F +M+ + V N VT +LS CA + GR
Sbjct: 397 ANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREI 456
Query: 379 FDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHG 438
+ R + E + A +V++ ++ L E ++ ++ + D+ W +++ G MHG
Sbjct: 457 HGHVIRTSMSENILVQNA-LVNMYAKCGLLSEGSLVFEAI-RDKDLISWNSIIKGYGMHG 514
Query: 439 NVE 441
E
Sbjct: 515 FAE 517
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 123/291 (42%), Gaps = 66/291 (22%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDD-----------RHFCR---- 106
+ K G A ++F I N + +N +I ++ +D+ H C
Sbjct: 339 YGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKAN 398
Query: 107 -------------------AMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHA 147
++ +++M + N +T ++ C G +H
Sbjct: 399 VVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHG 458
Query: 148 QVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDN 207
V++ ++ N+L+N+Y CGLLS +F+ I D+++WNS++ GY +G +
Sbjct: 459 HVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEK 518
Query: 208 ALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQ 267
AL +F +M I +G FH PD I + +VLSAC+
Sbjct: 519 ALSMFDRM----------ISSG-------------FH--------PDGIALVAVLSACSH 547
Query: 268 LGAIDHGKWV-HSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMP 317
G ++ G+ + +S +R G+E +V++ G+ G +++A EI + MP
Sbjct: 548 AGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMP 598
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 160/518 (30%), Positives = 259/518 (50%), Gaps = 52/518 (10%)
Query: 62 FSKYGSFTYATNVFHMIN-------NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKM 114
S Y Y + +++ PD+ +N ++ YA D A+ + K+M
Sbjct: 162 LSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKD-----AIAVLKRM 216
Query: 115 LCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLL 174
G+ P+ + L++ G+ +H +++ DV+ +LI++Y+ G L
Sbjct: 217 QIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYL 276
Query: 175 SNARKLFDEIPVT-----------------------------------DVVTWNSMVIGY 199
AR +FD + D +TWNS+ GY
Sbjct: 277 PYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGY 336
Query: 200 LRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDK 255
G + ALD+ KM K N++SW +I +G + G + AL++F +MQ+ V P+
Sbjct: 337 ATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNA 396
Query: 256 ITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEE 315
T++++L L + GK VH + R + CD + TALV+MYGK G +Q A EIF
Sbjct: 397 ATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWG 456
Query: 316 MPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQG 375
+ K ++W M+ +A+ G G + F M AG++P+ +TF +LS C +SGLV++G
Sbjct: 457 IKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEG 516
Query: 376 RWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQ 435
FD+M+ Y I P + H +CMVDLL R+ DE+ I++M ++PD +WGA L C+
Sbjct: 517 WKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCK 576
Query: 436 MHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPG 495
+H ++EL E L LEPHN A YM + ++Y R++ +RIRNL++ RV+ +
Sbjct: 577 IHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQ-DL 635
Query: 496 CSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
S I+I+ V F A G + D+ L +L +EMK
Sbjct: 636 WSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMK 673
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 177/437 (40%), Gaps = 112/437 (25%)
Query: 54 TRLLFSCSFSKYG---SFTYATNVFHMINNPDLRVYN--IMIRAYAGMDGVDDRHFCRAM 108
TR++ S S YG S +A +F + D +N +M+ +G ++ +A+
Sbjct: 23 TRVV-SASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSG-------NWEKAV 74
Query: 109 VLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLY 168
L+++M G T L++ C+ A G +H V++ G S+V NSLI
Sbjct: 75 ELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLI--- 131
Query: 169 MTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSI-- 226
+ Y RNG L+ + +F M +N+ SWNSI
Sbjct: 132 ----------------------------VMYSRNGKLELSRKVFNSMKDRNLSSWNSILS 163
Query: 227 ---------------------------------ITGLVQGGLAKEALELFHEMQQISVKP 253
++G GL+K+A+ + MQ +KP
Sbjct: 164 SYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKP 223
Query: 254 DKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIF 313
+I+S+L A A+ G + GK +H Y+ RN + DV + T L++MY K G + A +F
Sbjct: 224 STSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVF 283
Query: 314 EEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVE 373
+ M K+ AW +++S + L A + ME+ G+KP+ +T+ L S A G E
Sbjct: 284 DMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPE 343
Query: 374 QGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGG 433
+ DV+ + ++ + P+V W A+ G
Sbjct: 344 KA---LDVIGK------------------------------MKEKGVAPNVVSWTAIFSG 370
Query: 434 CQMHGNVELGEKVALHL 450
C +GN KV + +
Sbjct: 371 CSKNGNFRNALKVFIKM 387
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 115/247 (46%), Gaps = 35/247 (14%)
Query: 142 GEIVHAQVVKFGF-LSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYL 200
G +H ++K G SD ++ + Y C L A KLFDE+P D + WN +V+ L
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 201 RNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIAS 260
R+G + A++LFR EMQ K T+
Sbjct: 66 RSGNWEKAVELFR-------------------------------EMQFSGAKAYDSTMVK 94
Query: 261 VLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKD 320
+L C+ G+ +H Y+ R G+E +V + +L+ MY + G ++ + ++F M +++
Sbjct: 95 LLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRN 154
Query: 321 TSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFD 380
S+W +++S + G A EME G+KP+ VT+ LLS A GL +
Sbjct: 155 LSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDA---IA 211
Query: 381 VMKRVYL 387
V+KR+ +
Sbjct: 212 VLKRMQI 218
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 3/166 (1%)
Query: 277 VHSYLRRNGIE-CDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHG 335
+H L + G++ D + +A + YG+C + A ++F+EMP++D AW ++ V G
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSG 68
Query: 336 LGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHY 395
KA + F EM+ +G K T V LL C++ +GR + R+ L E V
Sbjct: 69 NWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGL-ESNVSMC 127
Query: 396 ACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVE 441
++ + SR + S + SM + ++ W ++L G V+
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMK-DRNLSSWNSILSSYTKLGYVD 172
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 265 bits (677), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 161/469 (34%), Positives = 255/469 (54%), Gaps = 45/469 (9%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCD---- 117
+S G A VF I ++ + MIR Y ++G + A+ L+K +L D
Sbjct: 121 YSTCGKLEDARKVFDEIPKRNIVSWTSMIRGY-DLNG----NALDAVSLFKDLLVDENDD 175
Query: 118 --GIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLS 175
+F + + +I C+R E +H+ V+K GF V GN+L++ Y G
Sbjct: 176 DDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGG--- 232
Query: 176 NARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGL 235
GG+ A +F ++ K+ +S+NSI++ Q G+
Sbjct: 233 --------------------------EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM 266
Query: 236 AKEALELFHEM-QQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGT 294
+ EA E+F + + V + IT+++VL A + GA+ GK +H + R G+E DV++GT
Sbjct: 267 SNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326
Query: 295 ALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKP 354
++++MY KCG V+ A + F+ M K+ +WTAMI+ + +HG KA + F M +GV+P
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 355 NHVTFVGLLSACAHSGL-VEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVI 413
N++TFV +L+AC+H+GL VE RW F+ MK + +EP + HY CMVDLL RA ++
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRW-FNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYD 445
Query: 414 LIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGR 473
LI+ M M+PD +W +LL C++H NVEL E L +L+ N +YM L IY AGR
Sbjct: 446 LIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGR 505
Query: 474 FDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLV 522
+ +R+R ++K R + K PG S++E+NG V F G E P ++ +
Sbjct: 506 WKDVERVRMIMKNRGLVKP-PGFSLLELNGEVHVFLI-GDEEHPQREKI 552
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 171/355 (48%), Gaps = 42/355 (11%)
Query: 107 AMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLIN 166
A++ + M ++P +FP IK C+ D SG+ H Q FG+ SD+F ++LI
Sbjct: 60 ALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIV 119
Query: 167 LYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSI 226
+Y TCG L++A +F ++ +NI+SW S+
Sbjct: 120 MYSTCG-------------------------------KLEDARKVFDEIPKRNIVSWTSM 148
Query: 227 ITGLVQGGLAKEALELFHEM------QQISVKPDKITIASVLSACAQLGAIDHGKWVHSY 280
I G G A +A+ LF ++ ++ D + + SV+SAC+++ A + +HS+
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
Query: 281 LRRNGIECDVVIGTALVNMYGKCGL--VQQAFEIFEEMPEKDTSAWTAMISVFALHGLGW 338
+ + G + V +G L++ Y K G V A +IF+++ +KD ++ +++SV+A G+
Sbjct: 209 VIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSN 268
Query: 339 KAFDCFLEMERAGVKP-NHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYAC 397
+AF+ F + + V N +T +L A +HSG + G+ D + R+ L E V
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGL-EDDVIVGTS 327
Query: 398 MVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLID 452
++D+ + + + M +V W A++ G MHG+ ++ +ID
Sbjct: 328 IIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHGHAAKALELFPAMID 381
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 159/338 (47%), Gaps = 52/338 (15%)
Query: 201 RNGGLDNALDLF-RKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIA 259
R+ N LF R ++ ++ SWNS+I L + G + EAL F M+++S+ P + +
Sbjct: 21 RHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFP 80
Query: 260 SVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK 319
+ AC+ L I GK H G + D+ + +AL+ MY CG ++ A ++F+E+P++
Sbjct: 81 CAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKR 140
Query: 320 DTSAWTAMISVFALHGLGWKAFDCFLEM------ERAGVKPNHVTFVGLLSACA------ 367
+ +WT+MI + L+G A F ++ + + + + V ++SAC+
Sbjct: 141 NIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG 200
Query: 368 -----HSGLVEQGRWCFD----------------------VMKRVY--LIEPQVYHYACM 398
HS ++++G FD V ++++ +++ Y +
Sbjct: 201 LTESIHSFVIKRG---FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSI 257
Query: 399 VDLLSRARLFDESVILIRSMPMEPDVYVWGAL-----LGGCQMHGNVELGEKVALHLIDL 453
+ + +++ + +E+ + R + ++ V + A+ L G + +G+ + +I +
Sbjct: 258 MSVYAQSGMSNEAFEVFRRL-VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 454 EPHNHAFY-MNLCDIYGKAGRFDAAKRIRNLLKERRVQ 490
+ ++ D+Y K GR + A++ + +K + V+
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVR 354
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 265 bits (676), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 165/507 (32%), Positives = 264/507 (52%), Gaps = 53/507 (10%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKML--CDGI 119
+ +YG A +F + ++ + MI +A + + A++L+ +M D +
Sbjct: 241 YCRYGDVREAYRLFCEMPERNIVSWTAMISGFAW-----NELYREALMLFLEMKKDVDAV 295
Query: 120 FPNCLTFPFLIKGCTRWMDGAS----GEIVHAQVVKFGFLSDVFNG---NSLINLYMTCG 172
PN T L C G GE +HAQV+ G+ + +G SL+++Y + G
Sbjct: 296 SPNGETLISLAYACGGL--GVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSG 353
Query: 173 LLSNARKLFDEI------------------------------PVTDVVTWNSMVIGYLRN 202
L+++A+ L +E + D V+W SM+ GYL
Sbjct: 354 LIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEA 413
Query: 203 GGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVL 262
G + A LF+K++ K+ ++W +I+GLVQ L EA L +M + +KP T + +L
Sbjct: 414 GDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLL 473
Query: 263 SACAQLGAIDHGKWVHSYLRRNGI--ECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKD 320
S+ +D GK +H + + + D+++ +LV+MY KCG ++ A+EIF +M +KD
Sbjct: 474 SSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKD 533
Query: 321 TSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFD 380
T +W +MI + HGL KA + F EM +G KPN VTF+G+LSAC+HSGL+ +G F
Sbjct: 534 TVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFK 593
Query: 381 VMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNV 440
MK Y I+P + HY M+DLL RA E+ I ++P PD V+GALLG C ++
Sbjct: 594 AMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRD 653
Query: 441 E----LGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGC 496
+ + E+ A+ L++L+P N ++ LC++Y GR D K +R + + V KK PGC
Sbjct: 654 KDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGV-KKTPGC 712
Query: 497 SMIEINGVVQEFSAGGSSELPMKDLVL 523
S + +NG F +G S +VL
Sbjct: 713 SWVVVNGRANVFLSGDKSASEAAQMVL 739
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 134/262 (51%), Gaps = 31/262 (11%)
Query: 140 ASGEIVHA-----QVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNS 194
+ G +VHA ++ + G ++ V SL++ Y G L AR LF+ +P ++VT N+
Sbjct: 54 SEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNA 113
Query: 195 MVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISV--- 251
M+ GY++ ++ A LFR+M KN++SW ++T L G +++A+ELF EM + +V
Sbjct: 114 MLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSW 172
Query: 252 ---------KPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGI-----------ECDVV 291
D V A + + Y+ +G+ E +VV
Sbjct: 173 NTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVV 232
Query: 292 IGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMER-- 349
T++V Y + G V++A+ +F EMPE++ +WTAMIS FA + L +A FLEM++
Sbjct: 233 TWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDV 292
Query: 350 AGVKPNHVTFVGLLSACAHSGL 371
V PN T + L AC G+
Sbjct: 293 DAVSPNGETLISLAYACGGLGV 314
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 119/490 (24%), Positives = 207/490 (42%), Gaps = 111/490 (22%)
Query: 49 QYHLITRLLFSCS----FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHF 104
Q I R+++ S ++K G A +F ++ ++ N M+ Y V R
Sbjct: 70 QRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGY-----VKCRRM 124
Query: 105 CRAMVLYKKM-------------LCDG--------IFP-----NCLTFPFLIKGCTRWMD 138
A L+++M LCD +F N +++ L+ G R
Sbjct: 125 NEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIR--- 181
Query: 139 GASGEIVHAQVVKFGFLS-DVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVI 197
+G++ A+ V S DV + N++I Y+ + A+ LF ++ +VVTW SMV
Sbjct: 182 --NGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVY 239
Query: 198 GYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQ--ISVKPDK 255
GY R G + A LF +M +NI+SW ++I+G L +EAL LF EM++ +V P+
Sbjct: 240 GYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNG 299
Query: 256 ITIASVLSACAQLGAIDH--GKWVHSYLRRNGIEC---DVVIGTALVNMYGKCGLV---- 306
T+ S+ AC LG G+ +H+ + NG E D + +LV+MY GL+
Sbjct: 300 ETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQ 359
Query: 307 -------------------------QQAFEIFEEMPE-KDTSAWTAMISVF--------- 331
++A +FE + D +WT+MI +
Sbjct: 360 SLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRA 419
Query: 332 -----ALH---GLGW--------------KAFDCFLEMERAGVKPNHVTFVGLLSACAHS 369
LH G+ W +A +M R G+KP + T+ LLS+ +
Sbjct: 420 FGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGAT 479
Query: 370 GLVEQGRWCFDVM-KRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWG 428
++QG+ V+ K +P + +V + ++ +++ + M ++ D W
Sbjct: 480 SNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM-VQKDTVSWN 538
Query: 429 ALLGGCQMHG 438
+++ G HG
Sbjct: 539 SMIMGLSHHG 548
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/471 (32%), Positives = 245/471 (52%), Gaps = 36/471 (7%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+++ G A VF I PD +N++I A D+ A+ ++ +M G P
Sbjct: 315 YARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADE-----AVSVFSQMRSSGFIP 369
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ ++ L+ T+ M + G +H+ ++K+GFL+D+ NSL+ +Y C L LF
Sbjct: 370 DAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLF 429
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
++ FR N + +SWN+I+T +Q E L
Sbjct: 430 ED----------------------------FR--NNADSVSWNTILTACLQHEQPVEMLR 459
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
LF M +PD IT+ ++L C ++ ++ G VH Y + G+ + I L++MY
Sbjct: 460 LFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYA 519
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KCG + QA IF+ M +D +W+ +I +A G G +A F EM+ AG++PNHVTFVG
Sbjct: 520 KCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVG 579
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME 421
+L+AC+H GLVE+G + M+ + I P H +C+VDLL+RA +E+ I M +E
Sbjct: 580 VLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLE 639
Query: 422 PDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIR 481
PDV VW LL C+ GNV L +K A +++ ++P N ++ LC ++ +G ++ A +R
Sbjct: 640 PDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLR 699
Query: 482 NLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEM 532
+ +K+ V KKIPG S IEI + F A D+ +L + ++M
Sbjct: 700 SSMKKHDV-KKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 131/510 (25%), Positives = 212/510 (41%), Gaps = 84/510 (16%)
Query: 21 LIEQCKNLREL---KRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHM 77
LI C + R L ++IH IL +S+ +Y I + K GS A VF
Sbjct: 73 LICACSSSRSLAQGRKIHDHIL-----NSNCKYDTILNNHILSMYGKCGSLRDAREVFDF 127
Query: 78 INNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWM 137
+ +L Y +I Y+ + A+ LY KML + + P+ F +IK C
Sbjct: 128 MPERNLVSYTSVITGYS-----QNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSS 182
Query: 138 DGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVI 197
D G+ +HAQV+K S + N+LI +Y+ +S+A ++F IP+
Sbjct: 183 DVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPM----------- 231
Query: 198 GYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISV-KPDKI 256
K++ISW+SII G Q G EAL EM V P++
Sbjct: 232 --------------------KDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEY 271
Query: 257 TIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEM 316
S L AC+ L D+G +H ++ + + + G +L +MY +CG + A +F+++
Sbjct: 272 IFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQI 331
Query: 317 PEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQG- 375
DT++W +I+ A +G +A F +M +G P+ ++ LL A + QG
Sbjct: 332 ERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGM 391
Query: 376 -------RWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDE--------------SVIL 414
+W F + + + + Y DL LF++ + L
Sbjct: 392 QIHSYIIKWGF--LADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACL 449
Query: 415 IRSMPM--------------EPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAF 460
P+ EPD G LL GC +++LG +V + + F
Sbjct: 450 QHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQF 509
Query: 461 YMN-LCDIYGKAGRFDAAKRIRNLLKERRV 489
N L D+Y K G A+RI + + R V
Sbjct: 510 IKNGLIDMYAKCGSLGQARRIFDSMDNRDV 539
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 112/244 (45%), Gaps = 32/244 (13%)
Query: 125 TFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEI 184
T+ LI C+ A G +H ++ D N ++++Y CG L +AR++FD +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 185 PVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFH 244
P ++V++ S++ GY +NG QG EA+ L+
Sbjct: 129 PERNLVSYTSVITGYSQNG----------------------------QGA---EAIRLYL 157
Query: 245 EMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCG 304
+M Q + PD+ S++ ACA + GK +H+ + + ++ AL+ MY +
Sbjct: 158 KMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFN 217
Query: 305 LVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGV-KPNHVTFVGLL 363
+ A +F +P KD +W+++I+ F+ G ++A EM GV PN F L
Sbjct: 218 QMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSL 277
Query: 364 SACA 367
AC+
Sbjct: 278 KACS 281
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 140/293 (47%), Gaps = 36/293 (12%)
Query: 224 NSIITGLVQGGLAKEALELFHEMQQISVKPDKI-TIASVLSACAQLGAIDHGKWVHSYLR 282
N I L + +EALE F Q+ S ++ T S++ AC+ ++ G+ +H ++
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 283 RNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFD 342
+ + D ++ +++MYGKCG ++ A E+F+ MPE++ ++T++I+ ++ +G G +A
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 343 CFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGR----WCFDVMKRVYLI---------- 388
+L+M + + P+ F ++ ACA S V G+ + +LI
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV 214
Query: 389 -------EPQVYHYACMVDLLSRARLFD---------ESVILIRSM----PMEPDVYVWG 428
+V++ M DL+S + + E++ ++ M P+ Y++G
Sbjct: 215 RFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG 274
Query: 429 ALLGGCQMHGNVELGEKVALHLIDLEPHNHAFY-MNLCDIYGKAGRFDAAKRI 480
+ L C + G ++ I E +A +LCD+Y + G ++A+R+
Sbjct: 275 SSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRV 327
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/451 (34%), Positives = 242/451 (53%), Gaps = 42/451 (9%)
Query: 52 LITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLY 111
L+T LL + K G + A VF+ ++ DL ++ MI Y V++ A+ L+
Sbjct: 279 LVTSLLDM--YVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNE-----ALSLF 331
Query: 112 KKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTC 171
+KM I PNC+T ++ GC + G VH +K G + D N+L+++Y C
Sbjct: 332 QKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKC 390
Query: 172 GLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLV 231
+A+ +F+ + K+I++WNSII+G
Sbjct: 391 YQNRDAKYVFE-------------------------------MESEKDIVAWNSIISGFS 419
Query: 232 QGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGI--ECD 289
Q G EAL LFH M SV P+ +T+AS+ SACA LG++ G +H+Y + G
Sbjct: 420 QNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSS 479
Query: 290 VVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMER 349
V +GTAL++ Y KCG Q A IF+ + EK+T W+AMI + G + + F EM +
Sbjct: 480 VHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLK 539
Query: 350 AGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFD 409
KPN TF +LSAC H+G+V +G+ F M + Y P HY CMVD+L+RA +
Sbjct: 540 KQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELE 599
Query: 410 ESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYG 469
+++ +I MP++PDV +GA L GC MH +LGE V ++DL P + ++Y+ + ++Y
Sbjct: 600 QALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYA 659
Query: 470 KAGRFDAAKRIRNLLKERRVQKKIPGCSMIE 500
GR++ AK +RNL+K+R + KI G S +E
Sbjct: 660 SDGRWNQAKEVRNLMKQRGLS-KIAGHSTME 689
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 200/424 (47%), Gaps = 53/424 (12%)
Query: 21 LIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATN---VFHM 77
L+ +C N+ L++ H +LT L + T+L+ S YG F Y + VF
Sbjct: 50 LLSKCTNIDSLRQSH-GVLTGNGLMG--DISIATKLV-----SLYGFFGYTKDARLVFDQ 101
Query: 78 INNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWM 137
I PD ++ +M+R Y ++ + LY ++ G + + F +K CT
Sbjct: 102 IPEPDFYLWKVMLRCYC-----LNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQ 156
Query: 138 DGASGEIVHAQVVKF-GFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMV 196
D +G+ +H Q+VK F + V G L+++Y CG + +A K+F++I +
Sbjct: 157 DLDNGKKIHCQLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFNDITL---------- 204
Query: 197 IGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKI 256
+N++ W S+I G V+ L +E L LF+ M++ +V ++
Sbjct: 205 ---------------------RNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEY 243
Query: 257 TIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEM 316
T +++ AC +L A+ GKW H L ++GIE + T+L++MY KCG + A +F E
Sbjct: 244 TYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEH 303
Query: 317 PEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGR 376
D WTAMI + +G +A F +M+ +KPN VT +LS C +E GR
Sbjct: 304 SHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGR 363
Query: 377 WCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQM 436
+ +V + + V + +V + ++ + + M E D+ W +++ G
Sbjct: 364 SVHGLSIKVGIWDTNVAN--ALVHMYAKCYQ-NRDAKYVFEMESEKDIVAWNSIISGFSQ 420
Query: 437 HGNV 440
+G++
Sbjct: 421 NGSI 424
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 161/401 (40%), Gaps = 74/401 (18%)
Query: 146 HAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGL 205
H + G + D+ L++LY G +AR +FD+IP D W M+ Y
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYC----- 118
Query: 206 DNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSAC 265
+N +++ E ++L+ + + + D I + L AC
Sbjct: 119 ---------LNKESV-----------------EVVKLYDLLMKHGFRYDDIVFSKALKAC 152
Query: 266 AQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWT 325
+L +D+GK +H L + D V+ T L++MY KCG ++ A ++F ++ ++ WT
Sbjct: 153 TELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWT 211
Query: 326 AMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRW-------- 377
+MI+ + + L + F M V N T+ L+ AC + QG+W
Sbjct: 212 SMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKS 271
Query: 378 ------------------CFDV--MKRVYLIEPQV--YHYACMVDLLSRARLFDESVILI 415
C D+ +RV+ V + M+ + +E++ L
Sbjct: 272 GIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLF 331
Query: 416 RSMP---MEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAG 472
+ M ++P+ ++L GC + N+ELG V I + + L +Y K
Sbjct: 332 QKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCY 391
Query: 473 RFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGS 513
+ AK + + E+ + + N ++ FS GS
Sbjct: 392 QNRDAKYVFEMESEKDI---------VAWNSIISGFSQNGS 423
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 157/473 (33%), Positives = 249/473 (52%), Gaps = 15/473 (3%)
Query: 68 FTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFP 127
F A +VF + +NIMI +A ++ + L+K+ML P+C TF
Sbjct: 154 FEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES-----CLSLFKEMLESEFKPDCYTFS 208
Query: 128 FLIKGCTRWMDGAS---GEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEI 184
L+ C+ D ++ G +VHA ++K G+ S V NS+++ Y G +A + + I
Sbjct: 209 SLMNACS--ADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESI 266
Query: 185 PVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFH 244
V V+WNS++ ++ G + AL++F KNI++W ++ITG + G ++AL F
Sbjct: 267 EVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFV 326
Query: 245 EMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCG 304
EM + V D +VL AC+ L + HGK +H L G + +G ALVN+Y KCG
Sbjct: 327 EMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCG 386
Query: 305 LVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLS 364
+++A F ++ KD +W M+ F +HGL +A + M +G+KP++VTF+GLL+
Sbjct: 387 DIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLT 446
Query: 365 ACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM---- 420
C+HSGLVE+G F+ M + Y I +V H CM+D+ R E+ L +
Sbjct: 447 TCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTD 506
Query: 421 EPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
+ W LLG C H + ELG +V+ L EP ++ L ++Y GR+ + +
Sbjct: 507 SSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDV 566
Query: 481 RNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
R + ER + KK PGCS IE+ V F G SS +++L L+ L +EM+
Sbjct: 567 RREMVERGM-KKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEMR 618
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 193/442 (43%), Gaps = 55/442 (12%)
Query: 61 SFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF 120
S +K G A VF + D +N M+ +Y+ + G+ A+ L+ ++
Sbjct: 13 SLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRL-GLHQE----AIALFTQLRFSDAK 67
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
P+ +F ++ C + G + + V++ GF + + NSLI++Y C +A K+
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 181 FDEI--PVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKE 238
F ++ + VTW S++ Y+ + ALD+F +M + +WN +I+G G +
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 239 ALELFHEMQQISVKPDKITIASVLSAC-AQLGAIDHGKWVHSYLRRNGIECDVVIGTALV 297
L LF EM + KPD T +S+++AC A + +G+ VH+ + +NG V +++
Sbjct: 188 CLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVL 247
Query: 298 NMYGKCGL-------------------------------VQQAFEIFEEMPEKDTSAWTA 326
+ Y K G ++A E+F PEK+ WT
Sbjct: 248 SFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTT 307
Query: 327 MISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVM---- 382
MI+ + +G G +A F+EM ++GV +H + +L AC+ L+ G+ +
Sbjct: 308 MITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCG 367
Query: 383 --KRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNV 440
Y+ V YA D+ R F + D+ W +L +HG
Sbjct: 368 FQGYAYVGNALVNLYAKCGDIKEADRAFGDIA--------NKDLVSWNTMLFAFGVHGLA 419
Query: 441 ELGEKVALHLI--DLEPHNHAF 460
+ K+ ++I ++P N F
Sbjct: 420 DQALKLYDNMIASGIKPDNVTF 441
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 143/330 (43%), Gaps = 47/330 (14%)
Query: 189 VVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQ 248
+V S + ++G + +A +F M + ++WN+++T + GL +EA+ LF +++
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 249 ISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCG---- 304
KPD + ++LS CA LG + G+ + S + R+G + + +L++MYGKC
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 305 -----------------------------LVQQAFEIFEEMPEKDTSAWTAMISVFALHG 335
+ A ++F EMP++ AW MIS A G
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 336 LGWKAFDCFLEMERAGVKPNHVTFVGLLSAC-AHSGLVEQGRWCFDVMKR---VYLIEPQ 391
F EM + KP+ TF L++AC A S V GR VM + +E +
Sbjct: 184 KLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAK 243
Query: 392 VYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLI 451
+ L SR D+++ + S+ + V W +++ C G E AL +
Sbjct: 244 NSVLSFYTKLGSR----DDAMRELESIEVLTQV-SWNSIIDACMKIGETE----KALEVF 294
Query: 452 DLEPH-NHAFYMNLCDIYGKAGRFDAAKRI 480
L P N + + YG+ G + A R
Sbjct: 295 HLAPEKNIVTWTTMITGYGRNGDGEQALRF 324
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 149/442 (33%), Positives = 240/442 (54%), Gaps = 40/442 (9%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+++ G+ A VF I + ++ ++++ Y + D R L + G+
Sbjct: 154 YAQLGTMESAQKVFDEIPVRNSVLWGVLMKGY--LKYSKDPEVFRLFCLMRDT---GLAL 208
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFL--SDVFNGNSLINLYMTCGLLSNARK 179
+ LT L+K C G G+ VH ++ F+ SD S+I++Y+ C LL NARK
Sbjct: 209 DALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQA-SIIDMYVKCRLLDNARK 267
Query: 180 LFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEA 239
LF +N++ W ++I+G + A EA
Sbjct: 268 -------------------------------LFETSVDRNVVMWTTLISGFAKCERAVEA 296
Query: 240 LELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNM 299
+LF +M + S+ P++ T+A++L +C+ LG++ HGK VH Y+ RNGIE D V T+ ++M
Sbjct: 297 FDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDM 356
Query: 300 YGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
Y +CG +Q A +F+ MPE++ +W++MI+ F ++GL +A DCF +M+ V PN VTF
Sbjct: 357 YARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTF 416
Query: 360 VGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP 419
V LLSAC+HSG V++G F+ M R Y + P+ HYACMVDLL RA E+ I +MP
Sbjct: 417 VSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMP 476
Query: 420 MEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKR 479
++P WGALL C++H V+L ++A L+ +EP + Y+ L +IY AG ++
Sbjct: 477 VKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNC 536
Query: 480 IRNLLKERRVQKKIPGCSMIEI 501
+R + + +K + G S E+
Sbjct: 537 VRRKMGIKGYRKHV-GQSATEV 557
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 121/512 (23%), Positives = 213/512 (41%), Gaps = 101/512 (19%)
Query: 17 ALSRLIEQCKNLRELKRIHTQILTSPNLHS-SDQYHLITRLLFSCSFSKYGSFTYATNVF 75
AL ++ Q K L +++H +++ +H D+ L + L + ++ + +AT+ F
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVI----IHGFEDEVVLGSSL--TNAYIQSNRLDFATSSF 62
Query: 76 HMIN--NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKML--CDGIFPNCLTFPFLIK 131
+ I + +N ++ Y+ + ++LY +M CDG+ + F IK
Sbjct: 63 NRIPCWKRNRHSWNTILSGYSKSKTC---CYSDVLLLYNRMRRHCDGV--DSFNLVFAIK 117
Query: 132 GCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVT 191
C +G ++H +K G D + SL+ +Y G + +A+K+FDEIPV + V
Sbjct: 118 ACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVL 177
Query: 192 WNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISV 251
W ++ GYL+ + K E LF M+ +
Sbjct: 178 WGVLMKGYLK----------YSK---------------------DPEVFRLFCLMRDTGL 206
Query: 252 KPDKITIASVLSACAQLGAIDHGKWVHSY-LRRNGIECDVVIGTALVNMYGKCGLVQQAF 310
D +T+ ++ AC + A GK VH +RR+ I+ + ++++MY KC L+ A
Sbjct: 207 ALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNAR 266
Query: 311 EIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSAC---- 366
++FE +++ WT +IS FA +AFD F +M R + PN T +L +C
Sbjct: 267 KLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLG 326
Query: 367 -------------------------------AHSGLVEQGRWCFDVMKRVYLIEPQVYHY 395
A G ++ R FD+M E V +
Sbjct: 327 SLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP-----ERNVISW 381
Query: 396 ACMVDLLSRARLFDESVILIRSMPME---PDVYVWGALLGGCQMHGNVELGEKV------ 446
+ M++ LF+E++ M + P+ + +LL C GNV+ G K
Sbjct: 382 SSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTR 441
Query: 447 ALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAK 478
++ E H Y + D+ G+AG AK
Sbjct: 442 DYGVVPEEEH----YACMVDLLGRAGEIGEAK 469
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 148/463 (31%), Positives = 253/463 (54%), Gaps = 38/463 (8%)
Query: 50 YHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMV 109
Y+ + F S++K GS +YA VFH I + + +N +I +A + D R ++
Sbjct: 428 YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN--DPR---LSLD 482
Query: 110 LYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYM 169
+ +M G+ P+ T L+ C++ G+ VH +++ D+F S+++LY+
Sbjct: 483 AHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYI 542
Query: 170 TCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITG 229
CG L + LFD + +V+WN+++ GYL+NG D AL +FR+M ++ G
Sbjct: 543 HCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM----------VLYG 592
Query: 230 LVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECD 289
+ G I++ V AC+ L ++ G+ H+Y ++ +E D
Sbjct: 593 IQLCG---------------------ISMMPVFGACSLLPSLRLGREAHAYALKHLLEDD 631
Query: 290 VVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMER 349
I +L++MY K G + Q+ ++F + EK T++W AMI + +HGL +A F EM+R
Sbjct: 632 AFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQR 691
Query: 350 AGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFD 409
G P+ +TF+G+L+AC HSGL+ +G D MK + ++P + HYAC++D+L RA D
Sbjct: 692 TGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLD 751
Query: 410 ESV-ILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIY 468
+++ ++ M E DV +W +LL C++H N+E+GEKVA L +LEP Y+ L ++Y
Sbjct: 752 KALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLY 811
Query: 469 GKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAG 511
G+++ +++R + E ++K GCS IE+N V F G
Sbjct: 812 AGLGKWEDVRKVRQRMNEMSLRKD-AGCSWIELNRKVFSFVVG 853
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 196/438 (44%), Gaps = 64/438 (14%)
Query: 12 LTLKNALSRLIEQCKNLREL---KRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSF 68
L ++ AL L++ +++ ++IH + S L + D L TR++ ++ GS
Sbjct: 81 LLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDV--LCTRII--TMYAMCGSP 136
Query: 69 TYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKML-CDGIFPNCLTFP 127
+ VF + + +L +N +I +Y+ + D+ + + +M+ + P+ T+P
Sbjct: 137 DDSRFVFDALRSKNLFQWNAVISSYSRNELYDE-----VLETFIEMISTTDLLPDHFTYP 191
Query: 128 FLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVT 187
+IK C D G VH VVK G + DVF GN+L++ Y T G VT
Sbjct: 192 CVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGF------------VT 239
Query: 188 DVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQ 247
D AL LF M +N++SWNS+I G ++E+ L EM
Sbjct: 240 D-------------------ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMM 280
Query: 248 QI----SVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKC 303
+ + PD T+ +VL CA+ I GK VH + + ++ ++V+ AL++MY KC
Sbjct: 281 EENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKC 340
Query: 304 GLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAG--VKPNHVTFVG 361
G + A IF+ K+ +W M+ F+ G FD +M G VK + VT +
Sbjct: 341 GCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILN 400
Query: 362 LLSACAHSGLVEQGR--WCFDVMKR-VY---LIEPQVYHYACMVDLLSRARLFDESVILI 415
+ C H + + C+ + + VY + V YA L R+F I
Sbjct: 401 AVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHG----I 456
Query: 416 RSMPMEPDVYVWGALLGG 433
RS V W AL+GG
Sbjct: 457 RS----KTVNSWNALIGG 470
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 127/264 (48%), Gaps = 13/264 (4%)
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
D++ T ++T +M G D++ +F + KN+ WN++I+ + L E LE
Sbjct: 119 DDVLCTRIITMYAMC------GSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLE 172
Query: 242 LFHEM-QQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
F EM + PD T V+ ACA + + G VH + + G+ DV +G ALV+ Y
Sbjct: 173 TFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFY 232
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLE-MERAG---VKPNH 356
G G V A ++F+ MPE++ +W +MI VF+ +G ++F E ME G P+
Sbjct: 233 GTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDV 292
Query: 357 VTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIR 416
T V +L CA + G+ ++ L + V + A M D+ S+ + ++ +
Sbjct: 293 ATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALM-DMYSKCGCITNAQMIFK 351
Query: 417 SMPMEPDVYVWGALLGGCQMHGNV 440
M +V W ++GG G+
Sbjct: 352 -MNNNKNVVSWNTMVGGFSAEGDT 374
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 154/519 (29%), Positives = 268/519 (51%), Gaps = 54/519 (10%)
Query: 18 LSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHM 77
+ +I++C + ++K++ + LT+ + SS L +RLL C+ S +G ++A +F
Sbjct: 6 METMIQKCVSFSQIKQLQSHFLTAGHFQSS---FLRSRLLERCAISPFGDLSFAVQIFRY 62
Query: 78 INNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP------NCLTFPFLIK 131
I P +N +IR +AG H A Y+ ML + LT F +K
Sbjct: 63 IPKPLTNDWNAIIRGFAG-----SSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLK 117
Query: 132 GCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVT 191
C R + ++ + +H Q+ + G +D +L++
Sbjct: 118 ACARALCSSAMDQLHCQINRRGLSADSLLCTTLLD------------------------- 152
Query: 192 WNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISV 251
Y +NG L +A LF +M +++ SWN++I GLV G A EA+EL+ M+ +
Sbjct: 153 ------AYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGI 206
Query: 252 KPDKITIASVLSACAQLGAIDHGKWV-HSYLRRNGIECDVVIGTALVNMYGKCGLVQQAF 310
+ ++T+ + L AC+ LG + G+ + H Y N V++ A ++MY KCG V +A+
Sbjct: 207 RRSEVTVVAALGACSHLGDVKEGENIFHGYSNDN-----VIVSNAAIDMYSKCGFVDKAY 261
Query: 311 EIFEEMP-EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHS 369
++FE+ +K W MI+ FA+HG +A + F ++E G+KP+ V+++ L+AC H+
Sbjct: 262 QVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHA 321
Query: 370 GLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGA 429
GLVE G F+ M +E + HY C+VDLLSRA E+ +I SM M PD +W +
Sbjct: 322 GLVEYGLSVFNNMA-CKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQS 380
Query: 430 LLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRV 489
LLG +++ +VE+ E + + ++ +N ++ L ++Y GR+ R+R+ ++ ++V
Sbjct: 381 LLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQV 440
Query: 490 QKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRL 528
KKIPG S IE G + EF S +++ +D +
Sbjct: 441 -KKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEI 478
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 151/501 (30%), Positives = 258/501 (51%), Gaps = 45/501 (8%)
Query: 17 ALSRLIEQCKNLREL---KRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATN 73
+S ++ C +LR+L K I+ +L + + S +++ + ++K G A +
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDV-----YAKCGDMITARD 363
Query: 74 VFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGC 133
VF+ + D +N +I Y + AM L+K M+ + +T+ LI
Sbjct: 364 VFNSMECKDTVSWNSIISGY-----IQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVS 418
Query: 134 TRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWN 193
TR D G+ +H+ +K G D+ N+LI++Y CG
Sbjct: 419 TRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCG--------------------- 457
Query: 194 SMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKP 253
+ ++L +F M + ++WN++I+ V+ G L++ +M++ V P
Sbjct: 458 ----------EVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVP 507
Query: 254 DKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIF 313
D T L CA L A GK +H L R G E ++ IG AL+ MY KCG ++ + +F
Sbjct: 508 DMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVF 567
Query: 314 EEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVE 373
E M +D WT MI + ++G G KA + F +ME++G+ P+ V F+ ++ AC+HSGLV+
Sbjct: 568 ERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVD 627
Query: 374 QGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGG 433
+G CF+ MK Y I+P + HYAC+VDLLSR++ ++ I++MP++PD +W ++L
Sbjct: 628 EGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRA 687
Query: 434 CQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKI 493
C+ G++E E+V+ +I+L P + + + + Y ++D IR LK++ + K
Sbjct: 688 CRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKN- 746
Query: 494 PGCSMIEINGVVQEFSAGGSS 514
PG S IE+ V FS+G S
Sbjct: 747 PGYSWIEVGKNVHVFSSGDDS 767
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 226/462 (48%), Gaps = 66/462 (14%)
Query: 18 LSRLIEQCKNLRELKRIHTQILTSPNLHSSDQY--HLITRLLFSCSFSKYGSFTYATNVF 75
+SR + NL EL+RIH ++ S L SSD + LI + +S + + +VF
Sbjct: 10 ISRALSSSSNLNELRRIHALVI-SLGLDSSDFFSGKLIDK------YSHFREPASSLSVF 62
Query: 76 HMINNPDLRVY--NIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGC 133
++ P VY N +IRA++ +G+ F A+ Y K+ + P+ TFP +IK C
Sbjct: 63 RRVS-PAKNVYLWNSIIRAFSK-NGL----FPEALEFYGKLRESKVSPDKYTFPSVIKAC 116
Query: 134 TRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWN 193
D G++V+ Q++ GF SD+F GN+L+++Y GLL+ AR++FDE+PV D+V+WN
Sbjct: 117 AGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWN 176
Query: 194 SMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKP 253
S++ GY +G +EALE++HE++ + P
Sbjct: 177 SLISGYSSHG-------------------------------YYEEALEIYHELKNSWIVP 205
Query: 254 DKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIF 313
D T++SVL A L + G+ +H + ++G+ VV+ LV MY K A +F
Sbjct: 206 DSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVF 265
Query: 314 EEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVE 373
+EM +D+ ++ MI + + ++ FLE KP+ +T +L AC H +
Sbjct: 266 DEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLS 324
Query: 374 QGRWCFDVM-KRVYLIEPQVYH-----YACMVDLLSRARLFDESVILIRSMPME-PDVYV 426
++ ++ M K +++E V + YA D+++ +F+ ME D
Sbjct: 325 LAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNS---------MECKDTVS 375
Query: 427 WGALLGGCQMHGNVELGEKV-ALHLIDLEPHNHAFYMNLCDI 467
W +++ G G++ K+ + +I E +H Y+ L +
Sbjct: 376 WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV 417
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/458 (34%), Positives = 245/458 (53%), Gaps = 12/458 (2%)
Query: 48 DQYHLITRLLFSCS-FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCR 106
D HL+ R L+S + + + +N VYN +IR+Y + +
Sbjct: 15 DALHLLQRFLYSSNQIKQIHTVLLTSNALVASRWKTKCVYNTLIRSY-----LTTGEYKT 69
Query: 107 AMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLIN 166
++ L+ ML + PN LTFP LIK + G +H Q +K GFL D F S +
Sbjct: 70 SLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVR 129
Query: 167 LYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSI 226
Y G L ++RK+FD+I VV NS++ RNG +D A + F++M +++SW ++
Sbjct: 130 FYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTV 189
Query: 227 ITGLVQGGLAKEALELFHEM---QQISVKPDKITIASVLSACAQL--GAIDHGKWVHSYL 281
I G + GL +AL +F EM ++ + P++ T SVLS+CA G I GK +H Y+
Sbjct: 190 INGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYV 249
Query: 282 RRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAF 341
I +GTAL++MYGK G ++ A IF+++ +K AW A+IS A +G +A
Sbjct: 250 MSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQAL 309
Query: 342 DCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDL 401
+ F M+ + V PN +T + +L+ACA S LV+ G F + Y I P HY C+VDL
Sbjct: 310 EMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDL 369
Query: 402 LSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFY 461
+ RA L ++ I+S+P EPD V GALLG C++H N ELG V LI L+P + Y
Sbjct: 370 IGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQY 429
Query: 462 MNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMI 499
+ L + A+++R + E + +KIP S++
Sbjct: 430 VALSTFNALDSNWSEAEKMRKAMIEAGI-RKIPAYSVL 466
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/468 (31%), Positives = 250/468 (53%), Gaps = 37/468 (7%)
Query: 61 SFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF 120
++SK G A VF + L +N MI Y +R A+ ++ +M +G
Sbjct: 105 AYSKCGFVELARQVFDGMLERSLVSWNTMIGLY-----TRNRMESEALDIFLEMRNEGFK 159
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
+ T ++ C D + +H VK +++ G +L++LY CG++ +A ++
Sbjct: 160 FSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQV 219
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
F+ + VTW+SMV GY++N + AL L+R+
Sbjct: 220 FESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRR-------------------------- 253
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
Q++S++ ++ T++SV+ AC+ L A+ GK +H+ + ++G +V + ++ V+MY
Sbjct: 254 -----AQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMY 308
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
KCG +++++ IF E+ EK+ W +IS FA H + F +M++ G+ PN VTF
Sbjct: 309 AKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFS 368
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
LLS C H+GLVE+GR F +M+ Y + P V HY+CMVD+L RA L E+ LI+S+P
Sbjct: 369 SLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPF 428
Query: 421 EPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
+P +WG+LL C+++ N+EL E A L +LEP N ++ L +IY +++ +
Sbjct: 429 DPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKS 488
Query: 481 RNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRL 528
R LL++ V KK+ G S I+I V FS G S ++++ LD L
Sbjct: 489 RKLLRDCDV-KKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNL 535
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 150/302 (49%), Gaps = 9/302 (2%)
Query: 188 DVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQ 247
DV N ++ Y + G ++ A +F M ++++SWN++I + + EAL++F EM+
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 154
Query: 248 QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQ 307
K + TI+SVLSAC K +H + I+ ++ +GTAL+++Y KCG+++
Sbjct: 155 NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIK 214
Query: 308 QAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACA 367
A ++FE M +K + W++M++ + + +A + +R ++ N T ++ AC+
Sbjct: 215 DAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 274
Query: 368 HSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVW 427
+ + +G+ V+ + V+ + VD+ ++ ES I+ S E ++ +W
Sbjct: 275 NLAALIEGKQMHAVICKSGF-GSNVFVASSAVDMYAKCGSLRESYIIF-SEVQEKNLELW 332
Query: 428 GALLGGCQMHGNVE----LGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNL 483
++ G H + L EK + + P N + +L + G G + +R L
Sbjct: 333 NTIISGFAKHARPKEVMILFEK--MQQDGMHP-NEVTFSSLLSVCGHTGLVEEGRRFFKL 389
Query: 484 LK 485
++
Sbjct: 390 MR 391
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 6/186 (3%)
Query: 258 IASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMP 317
+ +L CA+ GA+ K H + R +E DV + L+N Y KCG V+ A ++F+ M
Sbjct: 64 VHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGML 123
Query: 318 EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHS--GLVEQG 375
E+ +W MI ++ + + +A D FLEM G K + T +LSAC + L +
Sbjct: 124 ERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK 183
Query: 376 RWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQ 435
C V I+ +Y ++DL ++ + ++V + SM + V W +++ G
Sbjct: 184 LHCLSVKT---CIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSV-TWSSMVAGYV 239
Query: 436 MHGNVE 441
+ N E
Sbjct: 240 QNKNYE 245
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 157/507 (30%), Positives = 272/507 (53%), Gaps = 46/507 (9%)
Query: 31 LKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMIN-NPDLRVYNIM 89
LK++H ++L H I + S S++ GS + A VF + + DL +N M
Sbjct: 222 LKQVHAKVLKLGLQHEI----TICNAMIS-SYADCGSVSDAKRVFDGLGGSKDLISWNSM 276
Query: 90 IRAYAGMDGVDDRHFCR--AMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHA 147
I ++ +H + A L+ +M + + T+ L+ C+ G+ +H
Sbjct: 277 IAGFS-------KHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHG 329
Query: 148 QVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDN 207
V+K G N+LI++Y+ + P G +++
Sbjct: 330 MVIKKGLEQVTSATNALISMYI-------------QFPT----------------GTMED 360
Query: 208 ALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQ 267
AL LF + K++ISWNSIITG Q GL+++A++ F ++ +K D +++L +C+
Sbjct: 361 ALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSD 420
Query: 268 LGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK-DTSAWTA 326
L + G+ +H+ ++G + + ++L+ MY KCG+++ A + F+++ K T AW A
Sbjct: 421 LATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNA 480
Query: 327 MISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVY 386
MI +A HGLG + D F +M VK +HVTF +L+AC+H+GL+++G ++M+ VY
Sbjct: 481 MILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVY 540
Query: 387 LIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKV 446
I+P++ HYA VDLL RA L +++ LI SMP+ PD V LG C+ G +E+ +V
Sbjct: 541 KIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQV 600
Query: 447 ALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQ 506
A HL+++EP +H Y++L +Y +++ ++ ++KER V KK+PG S IEI V+
Sbjct: 601 ANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGV-KKVPGWSWIEIRNQVK 659
Query: 507 EFSAGGSSELPMKDLVLILDRLCNEMK 533
F+A S +D+ +++ L EM+
Sbjct: 660 AFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 114/508 (22%), Positives = 221/508 (43%), Gaps = 84/508 (16%)
Query: 61 SFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF 120
S+ K+G YA +F + D +N MI Y ++D A L+ M G
Sbjct: 44 SYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLED-----AWCLFTCMKRSGSD 98
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
+ +F L+KG GE VH V+K G+ +V+ G+SL+++Y C + +A +
Sbjct: 99 VDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEA 158
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
F EI + V+WN+++ G+++ + A W + GL++
Sbjct: 159 FKEISEPNSVSWNALIAGFVQVRDIKTAF-------------W---LLGLME-------- 194
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
+ +V D T A +L+ + K VH+ + + G++ ++ I A+++ Y
Sbjct: 195 ------MKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSY 248
Query: 301 GKCGLVQQAFEIFEEM-PEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
CG V A +F+ + KD +W +MI+ F+ H L AF+ F++M+R V+ + T+
Sbjct: 249 ADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTY 308
Query: 360 VGLLSACAHS----------GLV-----EQGRWCFDVMKRVYLIEP-------------- 390
GLLSAC+ G+V EQ + + +Y+ P
Sbjct: 309 TGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESL 368
Query: 391 ---QVYHYACMVDLLSRARLFDESVIL---IRSMPMEPDVYVWGALLGGCQMHGNVELGE 444
+ + ++ ++ L +++V +RS ++ D Y + ALL C ++LG+
Sbjct: 369 KSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQ 428
Query: 445 KV-ALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEING 503
++ AL N +L +Y K G ++A++ + + S + N
Sbjct: 429 QIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKH--------STVAWNA 480
Query: 504 VVQEFSAGGSSELPMKDLVLILDRLCNE 531
++ ++ G ++ + + ++CN+
Sbjct: 481 MILGYAQHGLGQVSLD----LFSQMCNQ 504
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 157/353 (44%), Gaps = 72/353 (20%)
Query: 144 IVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNG 203
+ H +K G +SD++ N +++ Y+ G L A LFDE+P D V+WN+M+ GY G
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
Query: 204 GLDNALDLFR--KMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASV 261
L++A LF K +G ++ D + + +
Sbjct: 81 KLEDAWCLFTCMKRSGSDV---------------------------------DGYSFSRL 107
Query: 262 LSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDT 321
L A + D G+ VH + + G EC+V +G++LV+MY KC V+ AFE F+E+ E ++
Sbjct: 108 LKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNS 167
Query: 322 SAWTAMISVFALHGLGWKAFDCFLEME-RAGVKPNHVTFVGLLSACAHSGLVEQGRWCFD 380
+W A+I+ F AF ME +A V + TF LL+ L++ +C +
Sbjct: 168 VSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLT------LLDDPMFC-N 220
Query: 381 VMKRVY-------------LIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVW 427
++K+V+ + + YA + R+FD + D+ W
Sbjct: 221 LLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFD-------GLGGSKDLISW 273
Query: 428 GALLGGCQMH----GNVELGEKVALHLIDLEPHNHAFYMNLC-----DIYGKA 471
+++ G H EL ++ H ++ + + + ++ C I+GK+
Sbjct: 274 NSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKS 326
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/510 (31%), Positives = 264/510 (51%), Gaps = 47/510 (9%)
Query: 17 ALSRLIEQC---KNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATN 73
A + L+ C K+L +I + IL +P+L + + L+++L+ FS A
Sbjct: 133 AYTDLLHACISAKSLHHGIKICSLILNNPSLRHNPK--LLSKLI--TLFSVCRRLDLARK 188
Query: 74 VFHMINNPDL---RVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLI 130
+F + + L +V+ M Y+ D A+++Y MLC I P + +
Sbjct: 189 IFDDVTDSSLLTEKVWAAMAIGYSRNGSPRD-----ALIVYVDMLCSFIEPGNFSISVAL 243
Query: 131 KGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVV 190
K C D G +HAQ+VK D N L+ LYM GL
Sbjct: 244 KACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLF---------------- 287
Query: 191 TWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQIS 250
D+A +F M+ +N+++WNS+I+ L + E LF +MQ+
Sbjct: 288 ---------------DDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEM 332
Query: 251 VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAF 310
+ T+ ++L AC+++ A+ GK +H+ + ++ + DV + +L++MYGKCG V+ +
Sbjct: 333 IGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSR 392
Query: 311 EIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSG 370
+F+ M KD ++W M++ +A++G + + F M +GV P+ +TFV LLS C+ +G
Sbjct: 393 RVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTG 452
Query: 371 LVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGAL 430
L E G F+ MK + + P + HYAC+VD+L RA E+V +I +MP +P +WG+L
Sbjct: 453 LTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSL 512
Query: 431 LGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQ 490
L C++HGNV +GE A L LEPHN Y+ + +IY A +D +IR ++K+R V+
Sbjct: 513 LNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVK 572
Query: 491 KKIPGCSMIEINGVVQEFSAGGSSELPMKD 520
K+ GCS +++ +Q F AGG E D
Sbjct: 573 KE-AGCSWVQVKDKIQIFVAGGGYEFRNSD 601
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 258 bits (660), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 136/341 (39%), Positives = 214/341 (62%), Gaps = 4/341 (1%)
Query: 162 NSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNII 221
N LI Y+ C + AR FD +P + V+W +M+ GY + G + +A +LFR M+ K+ +
Sbjct: 236 NILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKL 295
Query: 222 SWNSIITGLVQGGLAKEALELFHEMQQIS--VKPDKITIASVLSACAQLGAIDHGKWVHS 279
++++I Q G K+AL+LF +M + + ++PD+IT++SV+SA +QLG G WV S
Sbjct: 296 VYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVES 355
Query: 280 YLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWK 339
Y+ +GI+ D ++ T+L+++Y K G +AF++F + +KDT +++AMI ++G+ +
Sbjct: 356 YITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATE 415
Query: 340 AFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMV 399
A F M + PN VTF GLLSA +HSGLV++G CF+ MK + +EP HY MV
Sbjct: 416 ANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMV 474
Query: 400 DLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHA 459
D+L RA +E+ LI+SMPM+P+ VWGALL +H NVE GE H + LE
Sbjct: 475 DMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTG 534
Query: 460 FYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIE 500
+ +L IY GR+D A+ +R+ +KE+++ K + GCS +E
Sbjct: 535 YLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTL-GCSWVE 574
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 219/485 (45%), Gaps = 30/485 (6%)
Query: 14 LKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLL-FSCSFSKYGSFTYAT 72
L + L +++C L + K++H Q++ N ++ + L+ + L F+ FS+ TY
Sbjct: 2 LDSKLRFFLQRCVVLEQAKQVHAQLVV--NRYNHLEPILVHQTLHFTKEFSR-NIVTYVK 58
Query: 73 NVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKG 132
+ N D + ++R + R F + +Y M GI P+ +++
Sbjct: 59 RILKGFNGHDSFSWGCLVRFLS-----QHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRA 113
Query: 133 CTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTW 192
C + + G+ +HAQ +K G V+ L+ LY G + A+K FD+I + V+W
Sbjct: 114 CGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSW 173
Query: 193 NSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVK 252
NS++ GYL +G LD A +F K+ K+ +SWN II+ + G A LF M S
Sbjct: 174 NSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPA 233
Query: 253 PDKITIASVLSACAQLGAIDHGKWVHSYL----RRNGIECDVVIGTALVNMYGKCGLVQQ 308
I I ++ C ++ K +Y ++NG+ +++ Y K G VQ
Sbjct: 234 SWNILIGGYVN-CREM------KLARTYFDAMPQKNGVSW-----ITMISGYTKLGDVQS 281
Query: 309 AFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEM-ERAG-VKPNHVTFVGLLSAC 366
A E+F M +KD + AMI+ + +G A F +M ER ++P+ +T ++SA
Sbjct: 282 AEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSAN 341
Query: 367 AHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYV 426
+ G G W + + I+ ++DL + F ++ + ++ + D
Sbjct: 342 SQLGNTSFGTWVESYITE-HGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLN-KKDTVS 399
Query: 427 WGALLGGCQMHGNVELGEKVALHLIDLE-PHNHAFYMNLCDIYGKAGRFDAAKRIRNLLK 485
+ A++ GC ++G + +I+ + P N + L Y +G + N +K
Sbjct: 400 YSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK 459
Query: 486 ERRVQ 490
+ ++
Sbjct: 460 DHNLE 464
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/430 (35%), Positives = 238/430 (55%), Gaps = 17/430 (3%)
Query: 80 NPDLRVYNI---MIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCT-- 134
NP LR Y++ + AY D + HF + + K L + T+ FL+K +
Sbjct: 81 NPLLRCYSLGETPLHAYFLYDQLQRLHF---LSDHNKSLPPF---DSFTYLFLLKASSNP 134
Query: 135 RWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNS 194
R+ G +H +K GF S V+ +L+ +Y+ G + +A K+FDE+P + VTWN
Sbjct: 135 RFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNV 194
Query: 195 MVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQI-SVKP 253
M+ G G + AL KM + ++SW +II G + KEA+ LF M ++KP
Sbjct: 195 MITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKP 254
Query: 254 DKITIASVLSACAQLGAIDHGKWVHSYLRRNG-IECDVVIGTALVNMYGKCGLVQQAFEI 312
++ITI ++L A LG + VH+Y+ + G + CD+ + +L++ Y KCG +Q AF+
Sbjct: 255 NEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKF 314
Query: 313 FEEMP--EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSG 370
F E+P K+ +WT MIS FA+HG+G +A F +MER G+KPN VT + +L+AC+H G
Sbjct: 315 FIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGG 374
Query: 371 LVEQGRW-CFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGA 429
L E+ F+ M Y I P V HY C+VD+L R +E+ + +P+E VW
Sbjct: 375 LAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRM 434
Query: 430 LLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRV 489
LLG C ++ + EL E+V L++LE + Y+ + +I+ GRF A+R R + R V
Sbjct: 435 LLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGV 494
Query: 490 QKKIPGCSMI 499
K+PG S +
Sbjct: 495 A-KLPGHSQV 503
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/511 (30%), Positives = 260/511 (50%), Gaps = 58/511 (11%)
Query: 21 LIEQCKNLRELK---RIHTQIL-TSPNLHSSDQYHLITRLLFSCS-----FSKYGSFTYA 71
+++ C L +L+ +IH+QI+ T+ L++ + CS ++K G A
Sbjct: 496 ILKTCIRLGDLELGEQIHSQIIKTNFQLNA-----------YVCSVLIDMYAKLGKLDTA 544
Query: 72 TNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIK 131
++ D+ + MI Y + DD+ A+ +++ML GI + + +
Sbjct: 545 WDILIRFAGKDVVSWTTMIAGYTQYN-FDDK----ALTTFRQMLDRGIRSDEVGLTNAVS 599
Query: 132 GCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVT 191
C G+ +HAQ GF SD+ N+L+ LY CG + +
Sbjct: 600 ACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES-------------- 645
Query: 192 WNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISV 251
YL F + + I+WN++++G Q G +EAL +F M + +
Sbjct: 646 -------YL----------AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI 688
Query: 252 KPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFE 311
+ T S + A ++ + GK VH+ + + G + + + AL++MY KCG + A +
Sbjct: 689 DNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEK 748
Query: 312 IFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGL 371
F E+ K+ +W A+I+ ++ HG G +A D F +M + V+PNHVT VG+LSAC+H GL
Sbjct: 749 QFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGL 808
Query: 372 VEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALL 431
V++G F+ M Y + P+ HY C+VD+L+RA L + I+ MP++PD VW LL
Sbjct: 809 VDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLL 868
Query: 432 GGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQK 491
C +H N+E+GE A HL++LEP + A Y+ L ++Y + ++DA R +KE+ V+K
Sbjct: 869 SACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKK 928
Query: 492 KIPGCSMIEINGVVQEFSAGGSSELPMKDLV 522
+ PG S IE+ + F G + P+ D +
Sbjct: 929 E-PGQSWIEVKNSIHSFYVGDQNH-PLADEI 957
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 179/378 (47%), Gaps = 40/378 (10%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
++K A + F ++ ++N+M+ AY +D D R+ R ++++M + I P
Sbjct: 434 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD--DLRNSFR---IFRQMQIEEIVP 488
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
N T+P ++K C R D GE +H+Q++K F + + + LI++Y
Sbjct: 489 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA------------ 536
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
+ G LD A D+ + GK+++SW ++I G Q +AL
Sbjct: 537 -------------------KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALT 577
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
F +M ++ D++ + + +SACA L A+ G+ +H+ +G D+ ALV +Y
Sbjct: 578 TFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYS 637
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
+CG +++++ FE+ D AW A++S F G +A F+ M R G+ N+ TF
Sbjct: 638 RCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGS 697
Query: 362 LLSACAHSGLVEQGRWCFDVMKRV-YLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
+ A + + ++QG+ V+ + Y E +V + ++ + ++ ++ +
Sbjct: 698 AVKAASETANMKQGKQVHAVITKTGYDSETEVCN--ALISMYAKCGSISDAEKQFLEVST 755
Query: 421 EPDVYVWGALLGGCQMHG 438
+ +V W A++ HG
Sbjct: 756 KNEV-SWNAIINAYSKHG 772
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 192/435 (44%), Gaps = 50/435 (11%)
Query: 17 ALSRLIEQCKNLRELK---RIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATN 73
A S ++ CK + L+ ++H +L SSD Y + L S F G+ A +
Sbjct: 290 AFSSVLSACKKIESLEIGEQLHGLVLKLG--FSSDTY--VCNALVSLYF-HLGNLISAEH 344
Query: 74 VFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGC 133
+F ++ D YN +I + G ++ AM L+K+M DG+ P+ T L+ C
Sbjct: 345 IFSNMSQRDAVTYNTLINGLSQC-GYGEK----AMELFKRMHLDGLEPDSNTLASLVVAC 399
Query: 134 TRWMDGA--SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVT 191
+ DG G+ +HA K GF S+ +L+NLY C + A F E V +VV
Sbjct: 400 S--ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVL 457
Query: 192 WNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISV 251
WN M++ Y G LD+ + FR +F +MQ +
Sbjct: 458 WNVMLVAY---GLLDDLRNSFR----------------------------IFRQMQIEEI 486
Query: 252 KPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFE 311
P++ T S+L C +LG ++ G+ +HS + + + + + + L++MY K G + A++
Sbjct: 487 VPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWD 546
Query: 312 IFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGL 371
I KD +WT MI+ + + KA F +M G++ + V +SACA
Sbjct: 547 ILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQA 606
Query: 372 VEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALL 431
+++G+ V + +V L SR +ES + ++ W AL+
Sbjct: 607 LKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNI-AWNALV 664
Query: 432 GGCQMHGNVELGEKV 446
G Q GN E +V
Sbjct: 665 SGFQQSGNNEEALRV 679
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 167/379 (44%), Gaps = 52/379 (13%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCD---- 117
+S+ G A VF + D + MI + ++ C A + ++ CD
Sbjct: 232 YSRNGFVDLARRVFDGLRLKDHSSWVAMISGLS-------KNECEAEAI--RLFCDMYVL 282
Query: 118 GIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNA 177
GI P F ++ C + GE +H V+K GF SD + N+L++LY G L +A
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342
Query: 178 RKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAK 237
+ F M+ ++ +++N++I GL Q G +
Sbjct: 343 EHI-------------------------------FSNMSQRDAVTYNTLINGLSQCGYGE 371
Query: 238 EALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALV 297
+A+ELF M ++PD T+AS++ AC+ G + G+ +H+Y + G + I AL+
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALL 431
Query: 298 NMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHV 357
N+Y KC ++ A + F E ++ W M+ + L +F F +M+ + PN
Sbjct: 432 NLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQY 491
Query: 358 TFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYAC--MVDLLSRARLFDES-VIL 414
T+ +L C G +E G + ++ Q+ Y C ++D+ ++ D + IL
Sbjct: 492 TYPSILKTCIRLGDLELGE---QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Query: 415 IRSMPMEPDVYVWGALLGG 433
IR DV W ++ G
Sbjct: 549 IRFAG--KDVVSWTTMIAG 565
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 124/507 (24%), Positives = 218/507 (42%), Gaps = 90/507 (17%)
Query: 13 TLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSK---YGSFT 69
TLK L ++ +L E +++H+QIL D ++ LF K YG+F
Sbjct: 86 TLKWLLEGCLKTNGSLDEGRKLHSQILKL----GLDSNGCLSEKLFDFYLFKGDLYGAF- 140
Query: 70 YATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFL 129
VF + + +N MI+ A + + + L+ +M+ + + PN TF +
Sbjct: 141 ---KVFDEMPERTIFTWNKMIKELASRNLIGE-----VFGLFVRMVSENVTPNEGTFSGV 192
Query: 130 IKGCTRWMDGASG-----EIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEI 184
++ C G S E +HA+++ G N LI+LY
Sbjct: 193 LEACR----GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYS--------------- 233
Query: 185 PVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFH 244
RNG +D A +F + K+ SW ++I+GL + EA+ LF
Sbjct: 234 ----------------RNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFC 277
Query: 245 EMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCG 304
+M + + P +SVLSAC ++ +++ G+ +H + + G D + ALV++Y G
Sbjct: 278 DMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLG 337
Query: 305 LVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLS 364
+ A IF M ++D + +I+ + G G KA + F M G++P+ T L+
Sbjct: 338 NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVV 397
Query: 365 ACAHSGLVEQGRW--------------------------CFDVMKRV-YLIEPQVYHYAC 397
AC+ G + +G+ C D+ + Y +E +V +
Sbjct: 398 ACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVL 457
Query: 398 MVDLLSRARLFDE---SVILIRSMPME---PDVYVWGALLGGCQMHGNVELGEKVALHLI 451
+L L D+ S + R M +E P+ Y + ++L C G++ELGE++ +I
Sbjct: 458 WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 517
Query: 452 DLEPHNHAFYMN-LCDIYGKAGRFDAA 477
+A+ + L D+Y K G+ D A
Sbjct: 518 KTNFQLNAYVCSVLIDMYAKLGKLDTA 544
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 155/353 (43%), Gaps = 59/353 (16%)
Query: 7 IESKSLTLKNALSRLIEQCKNLRELK---RIHTQILTSPNLHSSD---QYHLITRLLFSC 60
I S + L NA+S C L+ LK +IH Q S SSD Q L+T
Sbjct: 587 IRSDEVGLTNAVS----ACAGLQALKEGQQIHAQACVSG--FSSDLPFQNALVTL----- 635
Query: 61 SFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF 120
+S+ G + F D +N ++ + ++ A+ ++ +M +GI
Sbjct: 636 -YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEE-----ALRVFVRMNREGID 689
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
N TF +K + + G+ VHA + K G+ S+ N+LI++Y CG +S+A K
Sbjct: 690 NNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQ 749
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
F E+ + V+WN+++ Y ++G EAL
Sbjct: 750 FLEVSTKNEVSWNAIINAYSKHG-------------------------------FGSEAL 778
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHG-KWVHSYLRRNGIECDVVIGTALVNM 299
+ F +M +V+P+ +T+ VLSAC+ +G +D G + S G+ +V+M
Sbjct: 779 DSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDM 838
Query: 300 YGKCGLVQQAFEIFEEMPEK-DTSAWTAMISVFALHG---LGWKAFDCFLEME 348
+ GL+ +A E +EMP K D W ++S +H +G A LE+E
Sbjct: 839 LTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELE 891
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 152/357 (42%), Gaps = 57/357 (15%)
Query: 118 GIFPNCLTFPFLIKGCTRWMDGA--SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLS 175
GI PN T +L++GC + +G+ G +H+Q++K G S+ G LS
Sbjct: 79 GIRPNHQTLKWLLEGCLK-TNGSLDEGRKLHSQILKLGLDSN--------------GCLS 123
Query: 176 NARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGL 235
KLFD YL G L A +F +M + I +WN +I L L
Sbjct: 124 --EKLFD---------------FYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNL 166
Query: 236 AKEALELFHEMQQISVKPDKITIASVLSACAQLG-AIDHGKWVHSYLRRNGIECDVVIGT 294
E LF M +V P++ T + VL AC A D + +H+ + G+ V+
Sbjct: 167 IGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCN 226
Query: 295 ALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKP 354
L+++Y + G V A +F+ + KD S+W AMIS + + +A F +M G+ P
Sbjct: 227 PLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMP 286
Query: 355 NHVTFVGLLSACAHSGLVEQGRWCFDVMKRV------YLIEPQVYHYACMVDLLSRARLF 408
F +LSAC +E G ++ ++ Y+ V Y + +L+S +F
Sbjct: 287 TPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIF 346
Query: 409 DESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKV-----ALHLIDLEPHNHAF 460
S + D + L+ G G GEK +HL LEP ++
Sbjct: 347 --------SNMSQRDAVTYNTLINGLSQCG---YGEKAMELFKRMHLDGLEPDSNTL 392
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 172/599 (28%), Positives = 297/599 (49%), Gaps = 91/599 (15%)
Query: 8 ESKSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYH-LITRLLFSCSFSKYG 66
E++ L+ L+++C ++ +L++I Q+L LHS ++ + LI + + + G
Sbjct: 30 EARRGDLERDFLFLLKKCISVNQLRQIQAQML----LHSVEKPNFLIPKAV------ELG 79
Query: 67 SFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTF 126
F Y++ +F + P+ +N MIR G+ + H A+ LY++M G+ P+ T+
Sbjct: 80 DFNYSSFLFSVTEEPNHYSFNYMIR---GLTNTWNDHEA-ALSLYRRMKFSGLKPDKFTY 135
Query: 127 PFLIKGCTRWMDGASGEIVHAQVVKF----------------------GFLSDVFNG--- 161
F+ C + + G VH+ + K G+ +F+
Sbjct: 136 NFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITE 195
Query: 162 ------NSLINLYMTCGLLSNARKLF---------------------------------- 181
NS+I+ Y G +A LF
Sbjct: 196 RDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLL 255
Query: 182 DEIPVTDVVTWNS-----MVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLA 236
+E+ +T + ++ ++ Y + G LD+A +F +M K+ ++W ++IT Q G +
Sbjct: 256 EEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKS 315
Query: 237 KEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTAL 296
EA +LF EM++ V PD T+++VLSAC +GA++ GK + ++ ++ ++ + T L
Sbjct: 316 SEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGL 375
Query: 297 VNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNH 356
V+MYGKCG V++A +FE MP K+ + W AMI+ +A G A + L +R V P+
Sbjct: 376 VDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQG---HAKEALLLFDRMSVPPSD 432
Query: 357 VTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIR 416
+TF+G+LSAC H+GLV QG F M ++ + P++ HY ++DLLSRA + DE+ +
Sbjct: 433 ITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFME 492
Query: 417 SMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDL-EPHNHAFYMNLCDIYGKAGRFD 475
P +PD + A+LG C +V + EK L+++ E N Y+ ++ +D
Sbjct: 493 RFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWD 552
Query: 476 AAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSS-ELPMKDLVLILDRLCNEMK 533
+ ++R L+++R V K PGCS IEI G + EF AG + +D + D L EMK
Sbjct: 553 ESAKMRALMRDRGVV-KTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVEEMK 610
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 148/446 (33%), Positives = 244/446 (54%), Gaps = 9/446 (2%)
Query: 49 QYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAM 108
+ +L+T + +SK G A +F I D+ + MI + +D+ A+
Sbjct: 236 ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDE-----AL 290
Query: 109 VLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLY 168
V Y +ML G+ P+ + L+ R + + G +H +VK GF F ++I+ Y
Sbjct: 291 VYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFY 350
Query: 169 MTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIIT 228
+ A + F+ + + N+++ G+++NG ++ A ++F + + K+I SWN++I+
Sbjct: 351 AVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMIS 410
Query: 229 GLVQGGLAKEALELFHEMQQIS-VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIE 287
G Q + AL LF EM S VKPD IT+ SV SA + LG+++ GK H YL + I
Sbjct: 411 GYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIP 470
Query: 288 CDVVIGTALVNMYGKCGLVQQAFEIFEE---MPEKDTSAWTAMISVFALHGLGWKAFDCF 344
+ + A+++MY KCG ++ A IF + + S W A+I A HG A D +
Sbjct: 471 PNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLY 530
Query: 345 LEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSR 404
+++ +KPN +TFVG+LSAC H+GLVE G+ F+ MK + IEP + HY CMVDLL +
Sbjct: 531 SDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGK 590
Query: 405 ARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNL 464
A +E+ +I+ MP++ DV +WG LL + HGNVE+ E A L ++P + + L
Sbjct: 591 AGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVML 650
Query: 465 CDIYGKAGRFDAAKRIRNLLKERRVQ 490
++Y AGR++ +R ++ R V+
Sbjct: 651 SNVYADAGRWEDVALVREEMRTRDVE 676
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 215/482 (44%), Gaps = 79/482 (16%)
Query: 71 ATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLI 130
A +F ++ Y +I+ YA + + AM L+++M GI N +T +I
Sbjct: 126 ALKLFDVMPERSCVSYTTLIKGYA-----QNNQWSEAMELFREMRNLGIMLNEVTLATVI 180
Query: 131 KGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVV 190
C+ ++ + +K VF +L+++Y C L +ARKLFDE+P ++V
Sbjct: 181 SACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLV 240
Query: 191 TWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQIS 250
TWN M+ GY + G ++ A +LF ++ K+I+SW ++I G ++ EAL + EM +
Sbjct: 241 TWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCG 300
Query: 251 VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG--------- 301
+KP ++ + +LSA A+ G +H + + G +C + +++ Y
Sbjct: 301 MKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLAL 360
Query: 302 ----------------------KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWK 339
K G+V+QA E+F++ +KD +W AMIS +A
Sbjct: 361 QQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQL 420
Query: 340 AFDCFLEM-ERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACM 398
A F EM + VKP+ +T V + SA + G +E+G+ D + I P A +
Sbjct: 421 ALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLN-FSTIPPNDNLTAAI 479
Query: 399 VDLLSR-------------------------------------ARLFDESVILIRSMPME 421
+D+ ++ A+L + ++S+P++
Sbjct: 480 IDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIK 539
Query: 422 PDVYVWGALLGGCQMHGNVELGEKVALHLID---LEPHNHAFYMNLCDIYGKAGRFDAAK 478
P+ + +L C G VELG+ + +EP + Y + D+ GKAGR + AK
Sbjct: 540 PNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEP-DIKHYGCMVDLLGKAGRLEEAK 598
Query: 479 RI 480
+
Sbjct: 599 EM 600
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 173/357 (48%), Gaps = 55/357 (15%)
Query: 132 GCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVT 191
C D G +H +V+K G S+ + NS++N+Y C LL++A +F + D +
Sbjct: 50 SCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSAS 109
Query: 192 WNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISV 251
+N MV GY+R+ L +AL LF M ++ +S+ ++I G Q EA+ELF EM+ + +
Sbjct: 110 FNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGI 169
Query: 252 KPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFE 311
+++T+A+V+SAC+ LG I + + S + +E V + T L++MY C ++ A +
Sbjct: 170 MLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARK 229
Query: 312 IFEEMPEKDTSAWTAMISVFALHGL-----------------GW--------------KA 340
+F+EMPE++ W M++ ++ GL W +A
Sbjct: 230 LFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEA 289
Query: 341 FDCFLEMERAGVKPNHVTFVGLLSACA-----------HSGLVEQGRWCFDVMKRVYLIE 389
+ EM R G+KP+ V V LLSA A H +V++G C+D +L
Sbjct: 290 LVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYD-----FLQA 344
Query: 390 PQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKV 446
++ YA D+ + F+ SV + + AL+ G +G VE +V
Sbjct: 345 TIIHFYAVSNDIKLALQQFEASV--------KDHIASRNALIAGFVKNGMVEQAREV 393
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 153/477 (32%), Positives = 249/477 (52%), Gaps = 27/477 (5%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ K + A VF + D +N +I A+ + + L+ ML I P
Sbjct: 427 YGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHE-----QNGKGYETLFLFVSMLRSRIEP 481
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ TF ++K CT G EI H+ +VK G S+ G SLI++Y CG++ A K+
Sbjct: 482 DEFTFGSILKACTGGSLGYGMEI-HSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIH 540
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNI----ISWNSIITGLVQGGLAK 237
+ + + ++ KM+ K + +SWNSII+G V ++
Sbjct: 541 SR---------------FFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSE 585
Query: 238 EALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALV 297
+A LF M ++ + PDK T A+VL CA L + GK +H+ + + ++ DV I + LV
Sbjct: 586 DAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLV 645
Query: 298 NMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHV 357
+MY KCG + + +FE+ +D W AMI +A HG G +A F M +KPNHV
Sbjct: 646 DMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHV 705
Query: 358 TFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRS 417
TF+ +L ACAH GL+++G F +MKR Y ++PQ+ HY+ MVD+L ++ ++ LIR
Sbjct: 706 TFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIRE 765
Query: 418 MPMEPDVYVWGALLGGCQMH-GNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDA 476
MP E D +W LLG C +H NVE+ E+ L+ L+P + + Y L ++Y AG ++
Sbjct: 766 MPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEK 825
Query: 477 AKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
+R ++ +++K+ PGCS +E+ + F G + +++ L + +EMK
Sbjct: 826 VSDLRRNMRGFKLKKE-PGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 131/243 (53%)
Query: 125 TFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEI 184
F F+ K C + G+ HA ++ GF F N L+ +Y +A +FD++
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 185 PVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFH 244
P+ DVV+WN M+ GY ++ + A F M ++++SWNS+++G +Q G + +++E+F
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 245 EMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCG 304
+M + ++ D T A +L C+ L G +H + R G + DVV +AL++MY K
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 305 LVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLS 364
++ +F+ +PEK++ +W+A+I+ + L A F EM++ + + +L
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 365 ACA 367
+CA
Sbjct: 290 SCA 292
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/460 (22%), Positives = 204/460 (44%), Gaps = 71/460 (15%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+SK A + F+M+ D+ +N M+ Y + + +++ ++ M +GI
Sbjct: 124 YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGY-----LQNGESLKSIEVFVDMGREGIEF 178
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ TF ++K C+ D + G +H VV+ G +DV ++L+++Y + ++
Sbjct: 179 DGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMY------AKGKRFV 232
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
+ +L +F+ + KN +SW++II G VQ L AL+
Sbjct: 233 E-------------------------SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALK 267
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
F EMQ+++ + ASVL +CA L + G +H++ ++ D ++ TA ++MY
Sbjct: 268 FFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYA 327
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KC +Q A +F+ + ++ AMI+ ++ G+KA F + +G+ + ++ G
Sbjct: 328 KCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSG 387
Query: 362 LLSACAHSGLVEQGRWCFDVMKR------VYLIEPQVYHYACMVDLLSRARLFD------ 409
+ ACA + +G + + + V + + Y L R+FD
Sbjct: 388 VFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRD 447
Query: 410 ------------------ESVILIRSM---PMEPDVYVWGALLGGCQMHGNVELGEKVAL 448
E++ L SM +EPD + +G++L C G++ G ++
Sbjct: 448 AVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHS 506
Query: 449 HLIDLE-PHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKER 487
++ N + +L D+Y K G + A++I + +R
Sbjct: 507 SIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQR 546
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 170/504 (33%), Positives = 254/504 (50%), Gaps = 46/504 (9%)
Query: 32 KRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIR 91
K +H ++ P +S + L +SK G A VF + D+ + +I
Sbjct: 393 KSVHAELFKRPIQSTSTIESALLTL-----YSKCGCDPDAYLVFKSMEEKDMVAWGSLIS 447
Query: 92 AYAGMDGVDDRHFCRAMVLYKKMLCD--GIFPNCLTFPFLIKGCTRWMDGASGEIVHAQV 149
+ F A+ ++ M D + P+ + C G VH +
Sbjct: 448 GLC-----KNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSM 502
Query: 150 VKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNAL 209
+K G + +VF G+SLI+LY CGL A K+F + ++V WNSM+ Y RN + ++
Sbjct: 503 IKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSI 562
Query: 210 DLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLG 269
DLF M L QG + PD ++I SVL A +
Sbjct: 563 DLFNLM--------------LSQG-----------------IFPDSVSITSVLVAISSTA 591
Query: 270 AIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMIS 329
++ GK +H Y R GI D + AL++MY KCG + A IF++M K W MI
Sbjct: 592 SLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIY 651
Query: 330 VFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIE 389
+ HG A F EM++AG P+ VTF+ L+SAC HSG VE+G+ F+ MK+ Y IE
Sbjct: 652 GYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIE 711
Query: 390 PQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALH 449
P + HYA MVDLL RA L +E+ I++MP+E D +W LL + H NVELG A
Sbjct: 712 PNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEK 771
Query: 450 LIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFS 509
L+ +EP + Y+ L ++Y +AG + A ++ L+KE+ + K+ PGCS IE++ F
Sbjct: 772 LLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQ-PGCSWIEVSDRTNVFF 830
Query: 510 AGGSSELPMK-DLVLILDRLCNEM 532
+GGSS PMK ++ +L+RL + M
Sbjct: 831 SGGSSS-PMKAEIFNVLNRLKSNM 853
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/497 (25%), Positives = 221/497 (44%), Gaps = 88/497 (17%)
Query: 23 EQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPD 82
Q +N ++IH ++ LH+ D Y + T LL +SK G A VF + +
Sbjct: 283 SQSENSGFGRQIHCDVVKM-GLHN-DPY-VCTSLL--SMYSKCGMVGEAETVFSCVVDKR 337
Query: 83 LRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASG 142
L ++N M+ AYA ++ + A+ L+ M + P+ T +I C+ G
Sbjct: 338 LEIWNAMVAAYA-----ENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYG 392
Query: 143 EIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRN 202
+ VHA++ K S ++L+ LY CG +A YL
Sbjct: 393 KSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDA---------------------YL-- 429
Query: 203 GGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQI--SVKPDKITIAS 260
+F+ M K++++W S+I+GL + G KEAL++F +M+ S+KPD + S
Sbjct: 430 --------VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTS 481
Query: 261 VLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKD 320
V +ACA L A+ G VH + + G+ +V +G++L+++Y KCGL + A ++F M ++
Sbjct: 482 VTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTEN 541
Query: 321 TSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRW--- 377
AW +MIS ++ + L + D F M G+ P+ V+ +L A + + + +G+
Sbjct: 542 MVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHG 601
Query: 378 --------------------------------CFDVMKRVYLI--EPQVYHYACMVDLLS 403
F M+ LI +Y Y D ++
Sbjct: 602 YTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCIT 661
Query: 404 RARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHL---IDLEPHNHAF 460
LFDE ++ PD + +L+ C G VE G+ + + +EP N
Sbjct: 662 ALSLFDE----MKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEP-NMEH 716
Query: 461 YMNLCDIYGKAGRFDAA 477
Y N+ D+ G+AG + A
Sbjct: 717 YANMVDLLGRAGLLEEA 733
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 158/340 (46%), Gaps = 40/340 (11%)
Query: 103 HFCRAMVLYKKMLCDGIFP---NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVF 159
+ +A+ LY K DG P + TFP L+K C+ + + G+ +H VV G+ D F
Sbjct: 39 EYLQALHLYSKH--DGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPF 96
Query: 160 NGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKN 219
SL+N+Y+ CG L A ++FD W+ G ++ ++
Sbjct: 97 IATSLVNMYVKCGFLDYAVQVFD--------GWSQSQSG----------------VSARD 132
Query: 220 IISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAI--DHGKWV 277
+ WNS+I G + KE + F M V+PD +++ V+S + G + GK +
Sbjct: 133 VTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQI 192
Query: 278 HSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSA-WTAMISVFALHGL 336
H ++ RN ++ D + TAL++MY K GL A+ +F E+ +K W MI F G+
Sbjct: 193 HGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGI 252
Query: 337 GWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCF-DVMKRVYLIEPQVYHY 395
+ D ++ + VK +F G L AC+ S GR DV+K +P Y
Sbjct: 253 CESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDP----Y 308
Query: 396 AC--MVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGG 433
C ++ + S+ + E+ + S ++ + +W A++
Sbjct: 309 VCTSLLSMYSKCGMVGEAETVF-SCVVDKRLEIWNAMVAA 347
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 177/398 (44%), Gaps = 54/398 (13%)
Query: 62 FSKYGSFTYATNVF-------HMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKM 114
+ K G YA VF ++ D+ V+N MI Y R F + +++M
Sbjct: 105 YVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKF-----RRFKEGVGCFRRM 159
Query: 115 LCDGIFPNCLTFPFLI-----KGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYM 169
L G+ P+ + ++ +G R +G +H +++ +D F +LI++Y
Sbjct: 160 LVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQ---IHGFMLRNSLDTDSFLKTALIDMYF 216
Query: 170 TCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITG 229
GL +A ++F EI + N++ WN +I G
Sbjct: 217 KFGLSIDAWRVFVEIE------------------------------DKSNVVLWNVMIVG 246
Query: 230 LVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECD 289
G+ + +L+L+ + SVK + L AC+Q G+ +H + + G+ D
Sbjct: 247 FGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHND 306
Query: 290 VVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMER 349
+ T+L++MY KCG+V +A +F + +K W AM++ +A + G+ A D F M +
Sbjct: 307 PYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQ 366
Query: 350 AGVKPNHVTFVGLLSACAHSGLVEQGRWCF-DVMKRVYLIEPQVYHYACMVDLLSRARLF 408
V P+ T ++S C+ GL G+ ++ KR I+ + ++ L S+
Sbjct: 367 KSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRP--IQSTSTIESALLTLYSKCGCD 424
Query: 409 DESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKV 446
++ ++ +SM E D+ WG+L+ G +G + KV
Sbjct: 425 PDAYLVFKSME-EKDMVAWGSLISGLCKNGKFKEALKV 461
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 186/406 (45%), Gaps = 46/406 (11%)
Query: 29 RELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMI-NNPDLRVYN 87
E K+IH +L +S D + L F K+G A VF I + ++ ++N
Sbjct: 187 EEGKQIHGFMLR----NSLDTDSFLKTALIDMYF-KFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 88 IMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHA 147
+MI + G G+ + ++ LY + + +F + C++ + G +H
Sbjct: 242 VMIVGFGG-SGICES----SLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHC 296
Query: 148 QVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDN 207
VVK G +D + SL+++Y CG++ A +F + + WN+MV Y N +
Sbjct: 297 DVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYS 356
Query: 208 ALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQ 267
ALDLF G M+Q SV PD T+++V+S C+
Sbjct: 357 ALDLF----------------GF---------------MRQKSVLPDSFTLSNVISCCSV 385
Query: 268 LGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAM 327
LG ++GK VH+ L + I+ I +AL+ +Y KCG A+ +F+ M EKD AW ++
Sbjct: 386 LGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSL 445
Query: 328 ISVFALHGLGWKAFDCFLEM--ERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRV 385
IS +G +A F +M + +KP+ + +ACA + G M +
Sbjct: 446 ISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT 505
Query: 386 YLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALL 431
L+ V+ + ++DL S+ L + ++ + SM E ++ W +++
Sbjct: 506 GLV-LNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMI 549
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 127/315 (40%), Gaps = 47/315 (14%)
Query: 222 SWNSIITGLVQGGLAKEALELFHEMQQISVKPDKI-TIASVLSACAQLGAIDHGKWVHSY 280
S NS I L+Q G +AL L+ + S + T S+L AC+ L + +GK +H
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 281 LRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPE-------KDTSAWTAMISVFAL 333
+ G D I T+LVNMY KCG + A ++F+ + +D + W +MI +
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 334 HGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLV--EQGRWCFDVMKRVYLIEPQ 391
+ CF M GV+P+ + ++S G E+G+ M R L +
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSL-DTD 204
Query: 392 VYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGAL--------------------- 430
+ ++D+ + L ++ + + + +V +W +
Sbjct: 205 SFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAK 264
Query: 431 --------------LGGCQMHGNVELGEKVALHLIDLEPHNHAFY-MNLCDIYGKAGRFD 475
LG C N G ++ ++ + HN + +L +Y K G
Sbjct: 265 NNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVG 324
Query: 476 AAKRIRNLLKERRVQ 490
A+ + + + ++R++
Sbjct: 325 EAETVFSCVVDKRLE 339
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 160/532 (30%), Positives = 268/532 (50%), Gaps = 42/532 (7%)
Query: 3 MISLIESKSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSF 62
++S ES TL + S E +NL K++H+ + S + D + + CS
Sbjct: 261 VLSGFESDKFTLSSVFSACAE-LENLSLGKQLHSWAIRSGLV--DDVECSLVDMYAKCSA 317
Query: 63 SKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDG-IFP 121
GS VF + + + + +I Y + A+ L+ +M+ G + P
Sbjct: 318 D--GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLA----TEAINLFSEMITQGHVEP 371
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
N TF K C D G+ V Q K G S+ NS+I++++ + +A++ F
Sbjct: 372 NHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAF 431
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
+ ++ KN++S+N+ + G + ++A +
Sbjct: 432 ES-------------------------------LSEKNLVSYNTFLDGTCRNLNFEQAFK 460
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
L E+ + + T AS+LS A +G+I G+ +HS + + G+ C+ + AL++MY
Sbjct: 461 LLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYS 520
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KCG + A +F M ++ +WT+MI+ FA HG + + F +M GVKPN VT+V
Sbjct: 521 KCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVA 580
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME 421
+LSAC+H GLV +G F+ M + I+P++ HYACMVDLL RA L ++ I +MP +
Sbjct: 581 ILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQ 640
Query: 422 PDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIR 481
DV VW LG C++H N ELG+ A +++L+P+ A Y+ L +IY AG+++ + +R
Sbjct: 641 ADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMR 700
Query: 482 NLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
+KER + K+ GCS IE+ + +F G ++ + LDRL E+K
Sbjct: 701 RKMKERNLVKE-GGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIK 751
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 128/519 (24%), Positives = 219/519 (42%), Gaps = 88/519 (16%)
Query: 17 ALSRLIEQCKNLREL---KRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATN 73
S L++ C R+ K +H +++ S Y+ + L +SK G A +
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISL-----YSKSGDSAKAED 118
Query: 74 VFHMIN---NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLI 130
VF + D+ ++ M+ Y G + R A+ ++ + L G+ PN + +I
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACY----GNNGREL-DAIKVFVEFLELGLVPNDYCYTAVI 173
Query: 131 KGCTRWMDGASGEIVHAQVVKFG-FLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDV 189
+ C+ G + ++K G F SDV G SLI++++
Sbjct: 174 RACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK------------------- 214
Query: 190 VTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQI 249
+NA +F KM+ N+++W +IT +Q G +EA+ F +M
Sbjct: 215 -----------GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLS 263
Query: 250 SVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKC---GLV 306
+ DK T++SV SACA+L + GK +HS+ R+G+ DV +LV+MY KC G V
Sbjct: 264 GFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSV 321
Query: 307 QQAFEIFEEMPEKDTSAWTAMISVFALH-GLGWKAFDCFLEMERAG-VKPNHVTFVGLLS 364
++F+ M + +WTA+I+ + + L +A + F EM G V+PNH TF
Sbjct: 322 DDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFK 381
Query: 365 ACAH----------------SGLVEQGRWCFDVM------------KRVY--LIEPQVYH 394
AC + GL V+ +R + L E +
Sbjct: 382 ACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVS 441
Query: 395 YACMVDLLSRARLFDESVILIRSMPMEP---DVYVWGALLGGCQMHGNVELGEKVALHLI 451
Y +D R F+++ L+ + + + +LL G G++ GE++ ++
Sbjct: 442 YNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV 501
Query: 452 DLEPH-NHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRV 489
L N L +Y K G D A R+ N ++ R V
Sbjct: 502 KLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV 540
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 126/261 (48%), Gaps = 37/261 (14%)
Query: 114 MLCDGIFP-NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCG 172
M DGI P + +TF L+K C R D G++VHA++++F D NSLI+LY G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 173 LLSNARKLFDEIP---VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITG 229
+ A +F+ + DVV+W++M+ Y NG R++
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNG---------REL-------------- 148
Query: 230 LVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNG-IEC 288
+A+++F E ++ + P+ +V+ AC+ + G+ +L + G E
Sbjct: 149 --------DAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFES 200
Query: 289 DVVIGTALVNMYGKC-GLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEM 347
DV +G +L++M+ K + A+++F++M E + WT MI+ G +A FL+M
Sbjct: 201 DVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM 260
Query: 348 ERAGVKPNHVTFVGLLSACAH 368
+G + + T + SACA
Sbjct: 261 VLSGFESDKFTLSSVFSACAE 281
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 98/212 (46%), Gaps = 4/212 (1%)
Query: 231 VQGGLAKEALELFHEMQQISVKP-DKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECD 289
+ G + A+ M + ++P D +T +S+L +C + GK VH+ L IE D
Sbjct: 37 LNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPD 96
Query: 290 VVIGTALVNMYGKCGLVQQAFEIFEEMP---EKDTSAWTAMISVFALHGLGWKAFDCFLE 346
V+ +L+++Y K G +A ++FE M ++D +W+AM++ + +G A F+E
Sbjct: 97 SVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVE 156
Query: 347 MERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRAR 406
G+ PN + ++ AC++S V GR + + E V ++D+ +
Sbjct: 157 FLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGE 216
Query: 407 LFDESVILIRSMPMEPDVYVWGALLGGCQMHG 438
E+ + E +V W ++ C G
Sbjct: 217 NSFENAYKVFDKMSELNVVTWTLMITRCMQMG 248
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 152/514 (29%), Positives = 267/514 (51%), Gaps = 43/514 (8%)
Query: 22 IEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNP 81
+ + +NL K+IH I+ HS +T L F G + A N+F N+
Sbjct: 350 VSKFENLEYCKQIHCYIMR----HSISLDIFLTSALIDAYFKCRG-VSMAQNIFSQCNSV 404
Query: 82 DLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGAS 141
D+ V+ MI Y + + + ++ +++ ++ I PN +T ++ +
Sbjct: 405 DVVVFTAMISGY-----LHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKL 459
Query: 142 GEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLR 201
G +H ++K GF + G ++I++Y CG
Sbjct: 460 GRELHGFIIKKGFDNRCNIGCAVIDMYAKCG----------------------------- 490
Query: 202 NGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASV 261
++ A ++F +++ ++I+SWNS+IT Q A+++F +M + D ++I++
Sbjct: 491 --RMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAA 548
Query: 262 LSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDT 321
LSACA L + GK +H ++ ++ + DV + L++MY KCG ++ A +F+ M EK+
Sbjct: 549 LSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNI 608
Query: 322 SAWTAMISVFALHGLGWKAFDCFLEM-ERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFD 380
+W ++I+ HG + F EM E++G++P+ +TF+ ++S+C H G V++G F
Sbjct: 609 VSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFR 668
Query: 381 VMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNV 440
M Y I+PQ HYAC+VDL RA E+ ++SMP PD VWG LLG C++H NV
Sbjct: 669 SMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNV 728
Query: 441 ELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIE 500
EL E + L+DL+P N +Y+ + + + A +++ ++R+L+KER VQ KIPG S IE
Sbjct: 729 ELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQ-KIPGYSWIE 787
Query: 501 INGVVQEFSAGGSSELPMKDLVLILDRLCNEMKI 534
IN F +G + + +L+ L E+++
Sbjct: 788 INKRTHLFVSGDVNHPESSHIYSLLNSLLGELRL 821
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 186/380 (48%), Gaps = 38/380 (10%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+SK G F A+ +F M++ D +N MI Y +++ ++ + +M+ G+ P
Sbjct: 284 YSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEE-----SLTFFYEMISSGVLP 338
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ +TF L+ +++ + + +H +++ D+F ++LI+ Y C +S A+ +F
Sbjct: 339 DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIF 398
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
+ DVV + +M+ GYL N GL ++LE
Sbjct: 399 SQCNSVDVVVFTAMISGYLHN-------------------------------GLYIDSLE 427
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
+F + ++ + P++IT+ S+L L A+ G+ +H ++ + G + IG A+++MY
Sbjct: 428 MFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYA 487
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KCG + A+EIFE + ++D +W +MI+ A A D F +M +G+ + V+
Sbjct: 488 KCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISA 547
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME 421
LSACA+ G+ M + + + VY + ++D+ ++ ++ + ++M E
Sbjct: 548 ALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-E 605
Query: 422 PDVYVWGALLGGCQMHGNVE 441
++ W +++ C HG ++
Sbjct: 606 KNIVSWNSIIAACGNHGKLK 625
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 190/427 (44%), Gaps = 87/427 (20%)
Query: 13 TLKNALSRLIEQCKN---LRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFT 69
T+ LS L++ C N LR+ K++H ++ N S D Y R+L ++ GSF+
Sbjct: 33 TIPRRLSLLLQACSNPNLLRQGKQVHAFLIV--NSISGDSY-TDERIL--GMYAMCGSFS 87
Query: 70 YATNVFHMIN--NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFP 127
+F+ ++ +R +N +I ++ V + +A+ Y KMLC G+ P+ TFP
Sbjct: 88 DCGKMFYRLDLRRSSIRPWNSIISSF-----VRNGLLNQALAFYFKMLCFGVSPDVSTFP 142
Query: 128 FLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLI---------------------- 165
L+K C + + + V G + F +SLI
Sbjct: 143 CLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQK 202
Query: 166 ---------NLYMTCGLLSNARKLF-----DEIPVTDVVTW------------------- 192
N Y CG L + K F D+I + VT+
Sbjct: 203 DCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQIS-PNAVTFDCVLSVCASKLLIDLGVQL 261
Query: 193 ----------------NSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLA 236
NS++ Y + G D+A LFR M+ + ++WN +I+G VQ GL
Sbjct: 262 HGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLM 321
Query: 237 KEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTAL 296
+E+L F+EM V PD IT +S+L + ++ +++ K +H Y+ R+ I D+ + +AL
Sbjct: 322 EESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSAL 381
Query: 297 VNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNH 356
++ Y KC V A IF + D +TAMIS + +GL + + F + + + PN
Sbjct: 382 IDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNE 441
Query: 357 VTFVGLL 363
+T V +L
Sbjct: 442 ITLVSIL 448
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/466 (31%), Positives = 245/466 (52%), Gaps = 41/466 (8%)
Query: 47 SDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCR 106
S+ L+ LL +C ++K +F A N+F MI D+ ++ +I Y V +
Sbjct: 195 SNDLSLVNSLL-NC-YAKSRAFKEAVNLFKMIAEKDVISWSTVIACY-----VQNGAAAE 247
Query: 107 AMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLIN 166
A++++ M+ DG PN T +++ C D G H ++ G ++V +L++
Sbjct: 248 ALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVD 307
Query: 167 LYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSI 226
+YM C A +F IP DV +SW ++
Sbjct: 308 MYMKCFSPEEAYAVFSRIPRKDV-------------------------------VSWVAL 336
Query: 227 ITGLVQGGLAKEALELFHEMQ-QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNG 285
I+G G+A ++E F M + + +PD I + VL +C++LG ++ K HSY+ + G
Sbjct: 337 ISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYG 396
Query: 286 IECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFL 345
+ + IG +LV +Y +CG + A ++F + KDT WT++I+ + +HG G KA + F
Sbjct: 397 FDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFN 456
Query: 346 EMERAG-VKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSR 404
M ++ VKPN VTF+ +LSAC+H+GL+ +G F +M Y + P + HYA +VDLL R
Sbjct: 457 HMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGR 516
Query: 405 ARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNL 464
D ++ + + MP P + G LLG C++H N E+ E VA L +LE ++ +YM +
Sbjct: 517 VGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLM 576
Query: 465 CDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSA 510
++YG G ++ +++RN +K+R ++K + S+IEI V F A
Sbjct: 577 SNVYGVKGEWENVEKLRNSVKQRGIKKGLAE-SLIEIRRKVHRFVA 621
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 203/428 (47%), Gaps = 44/428 (10%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKM-LCDGIF 120
+ K G A +F + PD+ ++ M+ + + +A+ +++M + +
Sbjct: 106 YIKCGRMIEALRMFDELEKPDIVTWSSMVSGFE-----KNGSPYQAVEFFRRMVMASDVT 160
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
P+ +T L+ CT+ + G VH V++ GF +D+ SL+N + C
Sbjct: 161 PDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDL----SLVNSLLNC--------- 207
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
Y ++ A++LF+ + K++ISW+++I VQ G A EAL
Sbjct: 208 ------------------YAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEAL 249
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
+F++M +P+ T+ VL ACA ++ G+ H R G+E +V + TALV+MY
Sbjct: 250 LVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMY 309
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCF-LEMERAGVKPNHVTF 359
KC ++A+ +F +P KD +W A+IS F L+G+ ++ + F + + +P+ +
Sbjct: 310 MKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILM 369
Query: 360 VGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP 419
V +L +C+ G +EQ + CF Y + + A +V+L SR + + +
Sbjct: 370 VKVLGSCSELGFLEQAK-CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA 428
Query: 420 MEPDVYVWGALLGGCQMHGNVELGEKVALHLI---DLEPHNHAFYMNLCDIYGKAGRFDA 476
++ D VW +L+ G +HG + H++ +++P N ++++ AG
Sbjct: 429 LK-DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKP-NEVTFLSILSACSHAGLIHE 486
Query: 477 AKRIRNLL 484
RI L+
Sbjct: 487 GLRIFKLM 494
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 181/377 (48%), Gaps = 40/377 (10%)
Query: 64 KYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNC 123
K+ S A +F + L +N ++++ + ++ + + + M D P+
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLS-----REKQWEEVLYHFSHMFRDEEKPDN 60
Query: 124 LTFPFLIKGCTRWMDGASGEIVHAQVVKFGFL-SDVFNGNSLINLYMTCGLLSNARKLFD 182
T P +K C + GE++H V K L SD++ G+SLI +Y+ C
Sbjct: 61 FTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKC----------- 109
Query: 183 EIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALEL 242
G + AL +F ++ +I++W+S+++G + G +A+E
Sbjct: 110 --------------------GRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEF 149
Query: 243 FHEMQQIS-VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
F M S V PD++T+ +++SAC +L G+ VH ++ R G D+ + +L+N Y
Sbjct: 150 FRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYA 209
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
K ++A +F+ + EKD +W+ +I+ + +G +A F +M G +PN T +
Sbjct: 210 KSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLC 269
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME 421
+L ACA + +EQGR ++ R L E +V +VD+ + +E+ + +P +
Sbjct: 270 VLQACAAAHDLEQGRKTHELAIRKGL-ETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRK 328
Query: 422 PDVYVWGALLGGCQMHG 438
DV W AL+ G ++G
Sbjct: 329 -DVVSWVALISGFTLNG 344
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 153/444 (34%), Positives = 232/444 (52%), Gaps = 46/444 (10%)
Query: 66 GSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLT 125
G Y VF I ++ + +I + V++ F A+ +++M +G+ N
Sbjct: 156 GEVNYGLRVFEDIPQWNVVAWGSLISGF-----VNNNRFSDAIEAFREMQSNGVKANETI 210
Query: 126 FPFLIKGCTRWMDGASGEIVHAQVVKFGFLS--------DVFNGNSLINLYMTCGLLSNA 177
L+ C R D +G+ H + GF +V SLI++Y CG L A
Sbjct: 211 MVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTA 270
Query: 178 RKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAK 237
R L F M + ++SWNSIITG Q G A+
Sbjct: 271 RYL-------------------------------FDGMPERTLVSWNSIITGYSQNGDAE 299
Query: 238 EALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALV 297
EAL +F +M + + PDK+T SV+ A G G+ +H+Y+ + G D I ALV
Sbjct: 300 EALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALV 359
Query: 298 NMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEM-ERAGVKPNH 356
NMY K G + A + FE++ +KDT AWT +I A HG G +A F M E+ P+
Sbjct: 360 NMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDG 419
Query: 357 VTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIR 416
+T++G+L AC+H GLVE+G+ F M+ ++ +EP V HY CMVD+LSRA F+E+ L++
Sbjct: 420 ITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVK 479
Query: 417 SMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDA 476
+MP++P+V +WGALL GC +H N+EL +++ + + E Y+ L +IY KAGR+
Sbjct: 480 TMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWAD 539
Query: 477 AKRIRNLLKERRVQKKIPGCSMIE 500
K IR +K +RV K+ G S +E
Sbjct: 540 VKLIRESMKSKRVD-KVLGHSSVE 562
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/512 (26%), Positives = 243/512 (47%), Gaps = 87/512 (16%)
Query: 15 KNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLL-FSCSFSKYGSFTYATN 73
K LS+L E C++L EL ++H ++ S + + ++RL+ F + + + +YA +
Sbjct: 7 KPILSQL-ENCRSLVELNQLHGLMIKSSVIRNVIP---LSRLIDFCTTCPETMNLSYARS 62
Query: 74 VFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGC 133
VF I+ P + ++N MIR Y+ D +A++ Y++ML G P+ TFP+++K C
Sbjct: 63 VFESIDCPSVYIWNSMIRGYSNSPNPD-----KALIFYQEMLRKGYSPDYFTFPYVLKAC 117
Query: 134 TRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWN 193
+ D G VH VVK GF +++ L+++YM CG ++ ++F++IP +VV W
Sbjct: 118 SGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWG 177
Query: 194 SMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKP 253
S++ G++ N +A++ FR EMQ VK
Sbjct: 178 SLISGFVNNNRFSDAIEAFR-------------------------------EMQSNGVKA 206
Query: 254 DKITIASVLSACAQLGAIDHGKWVHSYLRRNGIEC--------DVVIGTALVNMYGKCGL 305
++ + +L AC + I GKW H +L+ G + +V++ T+L++MY KCG
Sbjct: 207 NETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGD 266
Query: 306 VQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSA 365
++ A +F+ MPE+ +W ++I+ ++ +G +A FL+M G+ P+ VTF+ ++ A
Sbjct: 267 LRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRA 326
Query: 366 CAHSGLVEQGRWCFDVMKRVYLIEPQ------VYHYACMVDLLSRARLFD---------- 409
G + G+ + + ++ V YA D S + F+
Sbjct: 327 SMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAW 386
Query: 410 --------------ESVILIRSMPME----PDVYVWGALLGGCQMHGNVELGEKVALHLI 451
E++ + + M + PD + +L C G VE G++ +
Sbjct: 387 TVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMR 446
Query: 452 D---LEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
D LEP Y + DI +AGRF+ A+R+
Sbjct: 447 DLHGLEP-TVEHYGCMVDILSRAGRFEEAERL 477
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 133/427 (31%), Positives = 228/427 (53%), Gaps = 32/427 (7%)
Query: 106 RAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLI 165
A+ +++M G+ + F ++ C G+ +HA +++ F ++ G++LI
Sbjct: 253 EAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALI 312
Query: 166 NLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNS 225
++Y C L A+ +FD +M KN++SW +
Sbjct: 313 DMYCKCKCLHYAKTVFD-------------------------------RMKQKNVVSWTA 341
Query: 226 IITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNG 285
++ G Q G A+EA+++F +MQ+ + PD T+ +SACA + +++ G H +G
Sbjct: 342 MVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSG 401
Query: 286 IECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFL 345
+ V + +LV +YGKCG + + +F EM +D +WTAM+S +A G + F
Sbjct: 402 LIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFD 461
Query: 346 EMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRA 405
+M + G+KP+ VT G++SAC+ +GLVE+G+ F +M Y I P + HY+CM+DL SR+
Sbjct: 462 KMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRS 521
Query: 406 RLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLC 465
+E++ I MP PD W LL C+ GN+E+G+ A LI+L+PH+ A Y L
Sbjct: 522 GRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLS 581
Query: 466 DIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLIL 525
IY G++D+ ++R ++E+ V+K+ PG S I+ G + FSA S + + L
Sbjct: 582 SIYASKGKWDSVAQLRRGMREKNVKKE-PGQSWIKWKGKLHSFSADDESSPYLDQIYAKL 640
Query: 526 DRLCNEM 532
+ L N++
Sbjct: 641 EELNNKI 647
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 151/536 (28%), Positives = 250/536 (46%), Gaps = 76/536 (14%)
Query: 16 NALSRLIEQCKNL------RELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFT 69
N S I+QC L R +K IH I+ + + Y+ I +++ S T
Sbjct: 4 NYYSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVH-----AYALMKSST 58
Query: 70 YATNVFHMINNPDLRVYNIMIRAY--AGM--------DGVDDRHFCRAMVLYKKMLCDGI 119
YA VF I P+L +N ++ AY AG+ + + DR VL + G+
Sbjct: 59 YARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGL 118
Query: 120 FPNCL-----------------TFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGN 162
+ T ++K + + G+ +H QV+K GF S + G+
Sbjct: 119 VGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGS 178
Query: 163 SLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIIS 222
L+ +Y G +S+A+K+F + + V +NS++ G L G +++AL LFR M K+ +S
Sbjct: 179 PLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVS 237
Query: 223 WNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLR 282
W ++I GL Q GLAKEA+E F EM+ +K D+ SVL AC LGAI+ GK +H+ +
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII 297
Query: 283 RNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFD 342
R + + +G+AL++MY KC + A +F+ M +K+ +WTAM+ + G +A
Sbjct: 298 RTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVK 357
Query: 343 CFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRW------CFDVMKRVYLIEPQVYHYA 396
FL+M+R+G+ P+H T +SACA+ +E+G ++ V + V Y
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYG 417
Query: 397 CMVDLLSRARLFD------------------------ESVILIRSM---PMEPDVYVWGA 429
D+ RLF+ E++ L M ++PD
Sbjct: 418 KCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTG 477
Query: 430 LLGGCQMHGNVELGE---KVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRN 482
++ C G VE G+ K+ + P + Y + D++ ++GR + A R N
Sbjct: 478 VISACSRAGLVEKGQRYFKLMTSEYGIVP-SIGHYSCMIDLFSRSGRLEEAMRFIN 532
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 244/473 (51%), Gaps = 38/473 (8%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+SK+ +F + D YN++I +Y+ D + ++ +++M C G
Sbjct: 295 YSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQAD-----QYEASLHFFREMQCMGFDR 349
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
F ++ G +H Q + S + GNSL+++Y C + A +F
Sbjct: 350 RNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIF 409
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
+P + +SW ++I+G VQ GL L+
Sbjct: 410 KSLP-------------------------------QRTTVSWTALISGYVQKGLHGAGLK 438
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
LF +M+ +++ D+ T A+VL A A ++ GK +H+++ R+G +V G+ LV+MY
Sbjct: 439 LFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYA 498
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KCG ++ A ++FEEMP+++ +W A+IS A +G G A F +M +G++P+ V+ +G
Sbjct: 499 KCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILG 558
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME 421
+L+AC+H G VEQG F M +Y I P+ HYACM+DLL R F E+ L+ MP E
Sbjct: 559 VLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFE 618
Query: 422 PDVYVWGALLGGCQMHGNVELGEKVALHLIDLEP-HNHAFYMNLCDIYGKAGRFDAAKRI 480
PD +W ++L C++H N L E+ A L +E + A Y+++ +IY AG ++ + +
Sbjct: 619 PDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDV 678
Query: 481 RNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
+ ++ER + KK+P S +E+N + FS+ + ++V ++ L E++
Sbjct: 679 KKAMRERGI-KKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIE 730
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 161/368 (43%), Gaps = 38/368 (10%)
Query: 74 VFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGC 133
+F I D +N +I Y DG+ + ++ L+ KM G P+ TF ++K
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEK-DGL----YTESIHLFLKMRQSGHQPSDFTFSGVLKAV 260
Query: 134 TRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWN 193
D A G+ +HA V GF D GN +++ Y + R LFDE+P D V
Sbjct: 261 VGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFV--- 317
Query: 194 SMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKP 253
S+N +I+ Q + +L F EMQ +
Sbjct: 318 ----------------------------SYNVVISSYSQADQYEASLHFFREMQCMGFDR 349
Query: 254 DKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIF 313
A++LS A L ++ G+ +H + + +G +LV+MY KC + ++A IF
Sbjct: 350 RNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIF 409
Query: 314 EEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVE 373
+ +P++ T +WTA+IS + GL F +M + ++ + TF +L A A +
Sbjct: 410 KSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLL 469
Query: 374 QGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGG 433
G+ + R +E V+ + +VD+ ++ ++V + MP + + W AL+
Sbjct: 470 LGKQLHAFIIRSGNLE-NVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISA 527
Query: 434 CQMHGNVE 441
+G+ E
Sbjct: 528 HADNGDGE 535
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 122/225 (54%), Gaps = 4/225 (1%)
Query: 145 VHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGG 204
V A+++K GF +D N ++ + G +S ARK++DE+P + V+ N+M+ G+++ G
Sbjct: 35 VDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGD 94
Query: 205 LDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQIS--VKPDKITIASVL 262
+ +A DLF M + +++W ++ + EA +LF +M + S PD +T ++L
Sbjct: 95 VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLL 154
Query: 263 SACAQLGAIDHGKWVHSYLRRNGIECD--VVIGTALVNMYGKCGLVQQAFEIFEEMPEKD 320
C + VH++ + G + + + + L+ Y + + A +FEE+PEKD
Sbjct: 155 PGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKD 214
Query: 321 TSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSA 365
+ + +I+ + GL ++ FL+M ++G +P+ TF G+L A
Sbjct: 215 SVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 165/378 (43%), Gaps = 40/378 (10%)
Query: 64 KYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDG--IFP 121
K G + A ++F + + + + I++ YA + HF A L+++M P
Sbjct: 91 KTGDVSSARDLFDAMPDRTVVTWTILMGWYA-----RNSHFDEAFKLFRQMCRSSSCTLP 145
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ +TF L+ GC + + VHA VK GF ++ F
Sbjct: 146 DHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPF---------------------- 183
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
+ N ++ Y LD A LF ++ K+ +++N++ITG + GL E++
Sbjct: 184 -------LTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIH 236
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
LF +M+Q +P T + VL A L G+ +H+ G D +G +++ Y
Sbjct: 237 LFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYS 296
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
K V + +F+EMPE D ++ +IS ++ + F EM+ G + F
Sbjct: 297 KHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFAT 356
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYA-CMVDLLSRARLFDESVILIRSMPM 420
+LS A+ ++ GR + + + H +VD+ ++ +F+E+ ++ +S+P
Sbjct: 357 MLSIAANLSSLQMGRQLH--CQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQ 414
Query: 421 EPDVYVWGALLGGCQMHG 438
V W AL+ G G
Sbjct: 415 RTTV-SWTALISGYVQKG 431
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 213/379 (56%), Gaps = 33/379 (8%)
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
P+ T P +++ C+ + SG+++H +K GF S +F ++L+ +Y+ G L +ARK
Sbjct: 132 PDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARK- 190
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
LF M ++ + + ++ G VQ G A L
Sbjct: 191 ------------------------------LFDDMPVRDSVLYTAMFGGYVQQGEAMLGL 220
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
+F EM D + + S+L AC QLGA+ HGK VH + R + +G A+ +MY
Sbjct: 221 AMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMY 280
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
KC ++ A +F M +D +W+++I + L G +F F EM + G++PN VTF+
Sbjct: 281 VKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFL 340
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
G+LSACAH GLVE+ W + + + Y I P++ HYA + D +SRA L +E+ + MP+
Sbjct: 341 GVLSACAHGGLVEKS-WLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPV 399
Query: 421 EPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
+PD V GA+L GC+++GNVE+GE+VA LI L+P ++Y+ L +Y AGRFD A+ +
Sbjct: 400 KPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESL 459
Query: 481 RNLLKERRVQKKIPGCSMI 499
R +KE+++ K+PGCS I
Sbjct: 460 RQWMKEKQIS-KVPGCSSI 477
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 146/471 (30%), Positives = 246/471 (52%), Gaps = 42/471 (8%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ K+ A +F + ++ + MI AY+ + +A+ L ML D + P
Sbjct: 106 YVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKC-----KIHQKALELLVLMLRDNVRP 160
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
N T+ +++ C D ++H ++K G SDVF ++LI+++
Sbjct: 161 NVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFA------------ 205
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
+ G ++AL +F +M + I WNSII G Q + ALE
Sbjct: 206 -------------------KLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALE 246
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
LF M++ ++ T+ SVL AC L ++ G H ++ + + D+++ ALV+MY
Sbjct: 247 LFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYC 304
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KCG ++ A +F +M E+D W+ MIS A +G +A F M+ +G KPN++T VG
Sbjct: 305 KCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVG 364
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME 421
+L AC+H+GL+E G + F MK++Y I+P HY CM+DLL +A D++V L+ M E
Sbjct: 365 VLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECE 424
Query: 422 PDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIR 481
PD W LLG C++ N+ L E A +I L+P + Y L +IY + ++D+ + IR
Sbjct: 425 PDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIR 484
Query: 482 NLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEM 532
+++R ++K+ PGCS IE+N + F G +S + ++ L++L + +
Sbjct: 485 TRMRDRGIKKE-PGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRL 534
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 135/314 (42%), Gaps = 61/314 (19%)
Query: 239 ALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVN 298
A++ +Q + D T + ++ C A+ G + +L NG + + L+N
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLIN 104
Query: 299 MYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVT 358
MY K L+ A ++F++MP+++ +WT MIS ++ + KA + + M R V+PN T
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 359 FVGLLSACA--------HSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDE 410
+ +L +C H G++++G +E V+ + ++D+ ++ ++
Sbjct: 165 YSSVLRSCNGMSDVRMLHCGIIKEG------------LESDVFVRSALIDVFAKLGEPED 212
Query: 411 SVILIRSMPMEPDVYVWGALLGG-----------------------------------CQ 435
++ + M + D VW +++GG C
Sbjct: 213 ALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACT 271
Query: 436 MHGNVELGEKVALHLIDLEPHNHAFYMN--LCDIYGKAGRFDAAKRIRNLLKERRVQKKI 493
+ELG + +H++ ++ +N L D+Y K G + A R+ N +KER V
Sbjct: 272 GLALLELGMQAHVHIV---KYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWS 328
Query: 494 PGCSMIEINGVVQE 507
S + NG QE
Sbjct: 329 TMISGLAQNGYSQE 342
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 140/401 (34%), Positives = 228/401 (56%), Gaps = 11/401 (2%)
Query: 95 GMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGF 154
G VD C+ + +K+ + N +++ L+ + SGE+ A+ + F
Sbjct: 148 GTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVK-----SGELEEAKSM-FDL 201
Query: 155 LSDVFNG--NSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLF 212
+ + G N+L++ + G L NA+KLFDE+P D++++ SM+ GY + G + +A DLF
Sbjct: 202 MPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLF 261
Query: 213 RKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAID 272
+ G ++ +W+++I G Q G EA ++F EM +VKPD+ + ++SAC+Q+G +
Sbjct: 262 EEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFE 321
Query: 273 HGKWVHSYL--RRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISV 330
+ V SYL R N V+ AL++M KCG + +A ++FEEMP++D ++ +M+
Sbjct: 322 LCEKVDSYLHQRMNKFSSHYVV-PALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEG 380
Query: 331 FALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEP 390
A+HG G +A F +M G+ P+ V F +L C S LVE+G F++M++ Y I
Sbjct: 381 MAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILA 440
Query: 391 QVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHL 450
HY+C+V+LLSR E+ LI+SMP E WG+LLGGC +HGN E+ E VA HL
Sbjct: 441 SPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHL 500
Query: 451 IDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQK 491
+LEP + Y+ L +IY R+ +R+ + E + K
Sbjct: 501 FELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITK 541
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 208/430 (48%), Gaps = 64/430 (14%)
Query: 17 ALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFH 76
+L L + CK+ L +IH +I+ +Q + + S S S S +Y+++VF
Sbjct: 12 SLETLFKLCKSEIHLNQIHARIIRK----GLEQDQNLISIFISSSSSSSSSLSYSSSVFE 67
Query: 77 MINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF-PNCLTFPFLIKGCTR 135
+ +P ++N +I+ Y+ + F + + +M+ G+ P+ TFP ++K C+
Sbjct: 68 RVPSPGTYLWNHLIKGYS-----NKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSN 122
Query: 136 WMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSM 195
G VH V++ GF DV G S ++ Y C L +ARK+F E+P + V+W ++
Sbjct: 123 NGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTAL 182
Query: 196 VIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDK 255
V+ Y+++G L+ A +F M +N+ SWN+++ GLV+ G A +LF EM P +
Sbjct: 183 VVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEM------PKR 236
Query: 256 ITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEE 315
D++ T++++ Y K G + A ++FEE
Sbjct: 237 ---------------------------------DIISYTSMIDGYAKGGDMVSARDLFEE 263
Query: 316 MPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQG 375
D AW+A+I +A +G +AF F EM VKP+ VGL+SAC+ G
Sbjct: 264 ARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMG----- 318
Query: 376 RWCFDVMKRV--YL---IEPQVYHY--ACMVDLLSRARLFDESVILIRSMPMEPDVYVWG 428
CF++ ++V YL + HY ++D+ ++ D + L MP + D+ +
Sbjct: 319 --CFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMP-QRDLVSYC 375
Query: 429 ALLGGCQMHG 438
+++ G +HG
Sbjct: 376 SMMEGMAIHG 385
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 139/393 (35%), Positives = 223/393 (56%), Gaps = 9/393 (2%)
Query: 145 VHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL---FDEIPVTDVVTWNSMVIGYLR 201
HAQ+ K G+ + S + Y C AR+L F + V N ++ ++
Sbjct: 52 AHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLS-PGVCNINLIIESLMK 110
Query: 202 NGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQIS-VKPDKITIAS 260
G A + R + +N+I+WN +I G V+ +EAL+ M + +KP+K + AS
Sbjct: 111 IGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFAS 170
Query: 261 VLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKD 320
L+ACA+LG + H KWVHS + +GIE + ++ +ALV++Y KCG + + E+F + D
Sbjct: 171 SLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRND 230
Query: 321 TSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFD 380
S W AMI+ FA HGL +A F EME V P+ +TF+GLL+ C+H GL+E+G+ F
Sbjct: 231 VSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFG 290
Query: 381 VMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNV 440
+M R + I+P++ HY MVDLL RA E+ LI SMP+EPDV +W +LL + + N
Sbjct: 291 LMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNP 350
Query: 441 ELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIE 500
ELGE + + +L Y+ L +IY ++++A+++R L+ + + +K G S +E
Sbjct: 351 ELGE---IAIQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGI-RKAKGKSWLE 406
Query: 501 INGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
G++ F AG +S + K + +L+ L + K
Sbjct: 407 FGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTK 439
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 123/272 (45%), Gaps = 39/272 (14%)
Query: 61 SFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLC-DGI 119
S K G A V ++ ++ +N+MI Y V + + A+ K ML I
Sbjct: 107 SLMKIGESGLAKKVLRNASDQNVITWNLMIGGY-----VRNVQYEEALKALKNMLSFTDI 161
Query: 120 FPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARK 179
PN +F + C R D + VH+ ++ G + ++L+++Y CG + +R+
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 180 LFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEA 239
+F + DV WN+M+ G+ + GLA EA
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATH-------------------------------GLATEA 250
Query: 240 LELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYL-RRNGIECDVVIGTALVN 298
+ +F EM+ V PD IT +L+ C+ G ++ GK + RR I+ + A+V+
Sbjct: 251 IRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVD 310
Query: 299 MYGKCGLVQQAFEIFEEMP-EKDTSAWTAMIS 329
+ G+ G V++A+E+ E MP E D W +++S
Sbjct: 311 LLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 125/364 (34%), Positives = 207/364 (56%), Gaps = 1/364 (0%)
Query: 162 NSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNII 221
S++ Y G + +A + F+ +P+ V+ N+M++G+ G + A +F M ++
Sbjct: 238 TSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNA 297
Query: 222 SWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYL 281
+W +I + G EAL+LF +MQ+ V+P ++ S+LS CA L ++ +G+ VH++L
Sbjct: 298 TWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHL 357
Query: 282 RRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAF 341
R + DV + + L+ MY KCG + +A +F+ KD W ++IS +A HGLG +A
Sbjct: 358 VRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEAL 417
Query: 342 DCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDL 401
F EM +G PN VT + +L+AC+++G +E+G F+ M+ + + P V HY+C VD+
Sbjct: 418 KIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDM 477
Query: 402 LSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFY 461
L RA D+++ LI SM ++PD VWGALLG C+ H ++L E A L + EP N Y
Sbjct: 478 LGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTY 537
Query: 462 MNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDL 521
+ L I ++ +R ++ V K PGCS IE+ V F+ GG P + +
Sbjct: 538 VLLSSINASRSKWGDVAVVRKNMRTNNVS-KFPGCSWIEVGKKVHMFTRGGIKNHPEQAM 596
Query: 522 VLIL 525
+L++
Sbjct: 597 ILMM 600
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 126/276 (45%), Gaps = 40/276 (14%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHF-CRAMVLYKKMLCDGIF 120
F + G + A VF ++ + D + MI+AY + + F A+ L+ +M G+
Sbjct: 275 FGEVGEISKARRVFDLMEDRDNATWRGMIKAY------ERKGFELEALDLFAQMQKQGVR 328
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
P+ + ++ C G VHA +V+ F DV+ + L+ +Y+ CG L A+ +
Sbjct: 329 PSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLV 388
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
FD D++ WNS++ GY + GL +EAL
Sbjct: 389 FDRFSSKDIIMWNSIISGYASH-------------------------------GLGEEAL 417
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHG-KWVHSYLRRNGIECDVVIGTALVNM 299
++FHEM P+K+T+ ++L+AC+ G ++ G + S + + V + V+M
Sbjct: 418 KIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDM 477
Query: 300 YGKCGLVQQAFEIFEEMPEK-DTSAWTAMISVFALH 334
G+ G V +A E+ E M K D + W A++ H
Sbjct: 478 LGRAGQVDKAMELIESMTIKPDATVWGALLGACKTH 513
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 169/389 (43%), Gaps = 53/389 (13%)
Query: 162 NSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNII 221
NS+++ Y + GL AR+LFDE+ +VV+WN +V GY++N + A ++F M +N++
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 222 SWNSIITGLVQGGLAKEALELFHEMQQ-------------------------ISVKPDKI 256
SW +++ G +Q G+ EA LF M + + P K
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKD 171
Query: 257 TIAS--VLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFE 314
+AS ++ + G +D + + +R E +VV T ++ Y + V A ++FE
Sbjct: 172 VVASTNMIGGLCREGRVDEARLIFDEMR----ERNVVTWTTMITGYRQNNRVDVARKLFE 227
Query: 315 EMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQ 374
MPEK +WT+M+ + L G A + F M V + VG G + +
Sbjct: 228 VMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGF----GEVGEISK 283
Query: 375 GRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME---PDVYVWGALL 431
R FD+M+ + + M+ R E++ L M + P ++L
Sbjct: 284 ARRVFDLME-----DRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISIL 338
Query: 432 GGCQMHGNVELGEKVALHLIDLEPHNHAFYMN-LCDIYGKAGRFDAAKRIRNLLKERRVQ 490
C +++ G +V HL+ + + + + L +Y K G L+K + V
Sbjct: 339 SVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCG---------ELVKAKLVF 389
Query: 491 KKIPGCSMIEINGVVQEFSAGGSSELPMK 519
+ +I N ++ +++ G E +K
Sbjct: 390 DRFSSKDIIMWNSIISGYASHGLGEEALK 418
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 127/297 (42%), Gaps = 56/297 (18%)
Query: 155 LSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRK 214
+ DV ++I G + AR +FDE+ +VVTW +M+ GY +N +D A LF
Sbjct: 169 VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEV 228
Query: 215 MNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHG 274
M K +SW S++ G G ++A E F M +KP
Sbjct: 229 MPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM---PMKP--------------------- 264
Query: 275 KWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALH 334
V+ A++ +G+ G + +A +F+ M ++D + W MI +
Sbjct: 265 ---------------VIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERK 309
Query: 335 GLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKR------VYLI 388
G +A D F +M++ GV+P+ + + +LS CA ++ GR + R VY+
Sbjct: 310 GFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVA 369
Query: 389 EPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEK 445
+ Y +L+ +FD D+ +W +++ G HG LGE+
Sbjct: 370 SVLMTMYVKCGELVKAKLVFDRFS--------SKDIIMWNSIISGYASHG---LGEE 415
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 135/317 (42%), Gaps = 54/317 (17%)
Query: 172 GLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLV 231
G ++ ARK FD + + +WNS+V GY NG A LF +M+ +N++SWN +++G +
Sbjct: 31 GKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYI 90
Query: 232 QGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVV 291
+ + EA +F M P++ +VV
Sbjct: 91 KNRMIVEARNVFELM------PER---------------------------------NVV 111
Query: 292 IGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAG 351
TA+V Y + G+V +A +F MPE++ +WT M G KA + M
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKD 171
Query: 352 VKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDES 411
V V ++ G V++ R FD M+ E V + M+ + D +
Sbjct: 172 V----VASTNMIGGLCREGRVDEARLIFDEMR-----ERNVVTWTTMITGYRQNNRVDVA 222
Query: 412 VILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDI-YGK 470
L MP + +V W ++L G + G +E E+ ++ P N + +G+
Sbjct: 223 RKLFEVMPEKTEVS-WTSMLLGYTLSGRIEDAEE----FFEVMPMKPVIACNAMIVGFGE 277
Query: 471 AGRFDAAKRIRNLLKER 487
G A+R+ +L+++R
Sbjct: 278 VGEISKARRVFDLMEDR 294
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 20/213 (9%)
Query: 278 HSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLG 337
+YL G+ C I + + G + +A + F+ + K +W +++S + +GL
Sbjct: 10 RTYLTSTGVNCSFEI-----SRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLP 64
Query: 338 WKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYAC 397
+A F EM V V++ GL+S + ++ + R F++M E V +
Sbjct: 65 KEARQLFDEMSERNV----VSWNGLVSGYIKNRMIVEARNVFELMP-----ERNVVSWTA 115
Query: 398 MVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEP-H 456
MV + + E+ L MP +V W + GG G ++ K L D+ P
Sbjct: 116 MVKGYMQEGMVGEAESLFWRMPERNEVS-WTVMFGGLIDDGRIDKARK----LYDMMPVK 170
Query: 457 NHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRV 489
+ N+ + GR D A+ I + ++ER V
Sbjct: 171 DVVASTNMIGGLCREGRVDEARLIFDEMRERNV 203
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 248 bits (633), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 139/419 (33%), Positives = 233/419 (55%), Gaps = 34/419 (8%)
Query: 117 DGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSN 176
DG + ++ C D +G H +K GF+SDV+ G+SL+ L
Sbjct: 114 DGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVL--------- 164
Query: 177 ARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLA 236
Y +G ++NA +F +M +N++SW ++I+G Q
Sbjct: 165 ----------------------YRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRV 202
Query: 237 KEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTAL 296
L+L+ +M++ + P+ T ++LSAC GA+ G+ VH G++ + I +L
Sbjct: 203 DICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSL 262
Query: 297 VNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCF-LEMERAGVKPN 355
++MY KCG ++ AF IF++ KD +W +MI+ +A HGL +A + F L M ++G KP+
Sbjct: 263 ISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPD 322
Query: 356 HVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILI 415
+T++G+LS+C H+GLV++GR F++M + ++P++ HY+C+VDLL R L E++ LI
Sbjct: 323 AITYLGVLSSCRHAGLVKEGRKFFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQEALELI 381
Query: 416 RSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFD 475
+MPM+P+ +WG+LL C++HG+V G + A + LEP A ++ L ++Y G +
Sbjct: 382 ENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWK 441
Query: 476 AAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMKI 534
A +R L+K++ + K PGCS IEIN V F A S M ++V +L L + M+
Sbjct: 442 EAATVRKLMKDKGL-KTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCLIDHMEF 499
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 138/309 (44%), Gaps = 44/309 (14%)
Query: 66 GSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLT 125
G A VF + ++ + MI +A VD C + LY KM PN T
Sbjct: 169 GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVD---IC--LKLYSKMRKSTSDPNDYT 223
Query: 126 FPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP 185
F L+ CT G VH Q + G S + NSLI++Y CG L +A ++FD+
Sbjct: 224 FTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS 283
Query: 186 VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHE 245
DVV+WNSM+ GY Q GLA +A+ELF
Sbjct: 284 NKDVVSWNSMIAGY-------------------------------AQHGLAMQAIELFEL 312
Query: 246 MQQIS-VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCG 304
M S KPD IT VLS+C G + G+ + + +G++ ++ + LV++ G+ G
Sbjct: 313 MMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFG 372
Query: 305 LVQQAFEIFEEMPEKDTSA-WTAMISVFALHGLGWKAFDCFLEMERAGVKPN----HVTF 359
L+Q+A E+ E MP K S W +++ +HG W ER ++P+ HV
Sbjct: 373 LLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRA--AEERLMLEPDCAATHVQL 430
Query: 360 VGLLSACAH 368
L ++ +
Sbjct: 431 ANLYASVGY 439
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 25/222 (11%)
Query: 231 VQGGLAKEALELFHEMQQISVKPDKIT-----IASVLSACAQLGAIDHGKWVHSYLRRNG 285
+ G++ E+ E SVK D + ++S + +C G H + G
Sbjct: 91 TKNGVSSVLEEVMLEDSSSSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGG 150
Query: 286 IECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDC-- 343
DV +G++LV +Y G V+ A+++FEEMPE++ +WTAMIS FA W+ C
Sbjct: 151 FISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQE---WRVDICLK 207
Query: 344 -FLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWC------FDVMKRVYLIEPQVYHYA 396
+ +M ++ PN TF LLSAC SG + QGR + +++ + Y
Sbjct: 208 LYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYC 267
Query: 397 CMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHG 438
DL R+FD+ DV W +++ G HG
Sbjct: 268 KCGDLKDAFRIFDQFS--------NKDVVSWNSMIAGYAQHG 301
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 248 bits (633), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 155/525 (29%), Positives = 272/525 (51%), Gaps = 53/525 (10%)
Query: 15 KNALSRLIEQCKNLRELK---RIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYA 71
+++ + +I+ C NL+EL+ ++H ++ L + R ++SK + A
Sbjct: 295 ESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN-----IRTALMVAYSKCTAMLDA 349
Query: 72 TNVFHMIN-NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLI 130
+F I ++ + MI + DG ++ A+ L+ +M G+ PN T+ ++
Sbjct: 350 LRLFKEIGCVGNVVSWTAMISGFLQNDGKEE-----AVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 131 KGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVV 190
+ S VHAQVVK + G +L++ Y+ G + A K+F
Sbjct: 405 TA----LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVF--------- 451
Query: 191 TWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQIS 250
G+D+ K+I++W++++ G Q G + A+++F E+ +
Sbjct: 452 ------------SGIDD----------KDIVAWSAMLAGYAQTGETEAAIKMFGELTKGG 489
Query: 251 VKPDKITIASVLSACAQLGA-IDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQA 309
+KP++ T +S+L+ CA A + GK H + ++ ++ + + +AL+ MY K G ++ A
Sbjct: 490 IKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESA 549
Query: 310 FEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHS 369
E+F+ EKD +W +MIS +A HG KA D F EM++ VK + VTF+G+ +AC H+
Sbjct: 550 EEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHA 609
Query: 370 GLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGA 429
GLVE+G FD+M R I P H +CMVDL SRA ++++ +I +MP +W
Sbjct: 610 GLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRT 669
Query: 430 LLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRV 489
+L C++H ELG A +I ++P + A Y+ L ++Y ++G + ++R L+ ER V
Sbjct: 670 ILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNV 729
Query: 490 QKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLI-LDRLCNEMK 533
+K+ PG S IE+ F AG S P+KD + + L+ L +K
Sbjct: 730 KKE-PGYSWIEVKNKTYSFLAGDRSH-PLKDQIYMKLEDLSTRLK 772
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 180/410 (43%), Gaps = 47/410 (11%)
Query: 61 SFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF 120
++ K +F VF + ++ + +I YA D+ + L+ +M +G
Sbjct: 137 TYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDE-----VLTLFMRMQNEGTQ 191
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
PN TF + G G VH VVK G + NSLINLY+ CG + AR L
Sbjct: 192 PNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARIL 251
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
FD+ V VVTWNSM+ GY NG LDL EAL
Sbjct: 252 FDKTEVKSVVTWNSMISGYAANG-----LDL--------------------------EAL 280
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
+F+ M+ V+ + + ASV+ CA L + + +H + + G D I TAL+ Y
Sbjct: 281 GMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAY 340
Query: 301 GKCGLVQQAFEIFEEMP-EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
KC + A +F+E+ + +WTAMIS F + +A D F EM+R GV+PN T+
Sbjct: 341 SKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY 400
Query: 360 VGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP 419
+L+A ++ V+K Y V ++D + +E+ + +
Sbjct: 401 SVILTALP---VISPSEVHAQVVKTNYERSSTV--GTALLDAYVKLGKVEEAAKVFSGID 455
Query: 420 MEPDVYVWGALLGGCQMHGNVELGEKVALHLID--LEPHNHAFY--MNLC 465
+ D+ W A+L G G E K+ L ++P+ F +N+C
Sbjct: 456 -DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 145/327 (44%), Gaps = 54/327 (16%)
Query: 118 GIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNA 177
G+ +C F ++K D G +H Q +KFGFL DV G SL++ YM +
Sbjct: 88 GMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDG 147
Query: 178 RKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAK 237
RK+ F +M +N+++W ++I+G + +
Sbjct: 148 RKV-------------------------------FDEMKERNVVTWTTLISGYARNSMND 176
Query: 238 EALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALV 297
E L LF MQ +P+ T A+ L A+ G G VH+ + +NG++ + + +L+
Sbjct: 177 EVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLI 236
Query: 298 NMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHV 357
N+Y KCG V++A +F++ K W +MIS +A +GL +A F M V+ +
Sbjct: 237 NLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSES 296
Query: 358 TFVGLLSACA-----------HSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRAR 406
+F ++ CA H +V+ G + FD R L+ V + C +L R
Sbjct: 297 SFASVIKLCANLKELRFTEQLHCSVVKYG-FLFDQNIRTALM---VAYSKCTA-MLDALR 351
Query: 407 LFDESVILIRSMPMEPDVYVWGALLGG 433
LF E + +V W A++ G
Sbjct: 352 LFKE-------IGCVGNVVSWTAMISG 371
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 143/310 (46%), Gaps = 29/310 (9%)
Query: 198 GYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKIT 257
G + + L NA +LF K G++ S+ S++ G + G +EA LF + ++ ++ D
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 258 IASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMP 317
+SVL A L G+ +H + G DV +GT+LV+ Y K + ++F+EM
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 318 EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRW 377
E++ WT +IS +A + + + F+ M+ G +PN TF L A G+ +G
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 378 CFDVMKRVYLIEPQVYHYACMVDL------LSRAR-LFDESVILIRSMPMEPDVYVWGAL 430
V+ + L + + +++L + +AR LFD++ + V W ++
Sbjct: 216 VHTVVVKNGL-DKTIPVSNSLINLYLKCGNVRKARILFDKTEV--------KSVVTWNSM 266
Query: 431 LGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQ 490
+ G +G +DLE + M L + F + ++ LKE R
Sbjct: 267 ISGYAANG------------LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFT 314
Query: 491 KKIPGCSMIE 500
+++ CS+++
Sbjct: 315 EQLH-CSVVK 323
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 149/473 (31%), Positives = 244/473 (51%), Gaps = 38/473 (8%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ K A VF + L +N MI+ Y D C + + +M+ +G P
Sbjct: 253 YGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKG---DSKSC--VEILNRMIIEGTRP 307
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ T ++ C+R + G+ +H V++ +D++ SLI+LY CG + A +F
Sbjct: 308 SQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVF 367
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
+ DV SWN +I+ + G +A+E
Sbjct: 368 SKTQ-KDVAE------------------------------SWNVMISSYISVGNWFKAVE 396
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
++ +M + VKPD +T SVL AC+QL A++ GK +H + + +E D ++ +AL++MY
Sbjct: 397 VYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYS 456
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KCG ++AF IF +P+KD +WT MIS + HG +A F EM++ G+KP+ VT +
Sbjct: 457 KCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLA 516
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME 421
+LSAC H+GL+++G F M+ Y IEP + HY+CM+D+L RA E+ +I+ P
Sbjct: 517 VLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPET 576
Query: 422 PD-VYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
D + L C +H LG+++A L++ P + + YM L ++Y +DAA+R+
Sbjct: 577 SDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRV 636
Query: 481 RNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
R +KE ++KK PGCS IE++ V F A S L +++ L L M+
Sbjct: 637 RLKMKEMGLRKK-PGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLSGHME 688
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/521 (23%), Positives = 224/521 (42%), Gaps = 87/521 (16%)
Query: 10 KSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFT 69
+S L + L K+LR +K +H +ILT + + F+C
Sbjct: 2 ESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCK-----DHC 56
Query: 70 YATNVFHMIN-NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKML-CDGIFPNCLTFP 127
A +VF + D+ ++N ++ Y+ + F + ++K++L C P+ TFP
Sbjct: 57 SARHVFENFDIRSDVYIWNSLMSGYS-----KNSMFHDTLEVFKRLLNCSICVPDSFTFP 111
Query: 128 FLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVT 187
+IK G ++H VVK G++ DV +SL+ +Y L
Sbjct: 112 NVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLF------------- 158
Query: 188 DVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQ 247
+N+L +F +M +++ SWN++I+ Q G A++ALELF M+
Sbjct: 159 ------------------ENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRME 200
Query: 248 QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQ 307
+P+ +++ +SAC++L ++ GK +H + G E D + +ALV+MYGKC ++
Sbjct: 201 SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLE 260
Query: 308 QAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACA 367
A E+F++MP K AW +MI + G + M G +P+ T +L AC+
Sbjct: 261 VAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACS 320
Query: 368 HSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDL-------------------------- 401
S + G++ + R ++ +Y ++DL
Sbjct: 321 RSRNLLHGKFIHGYVIRS-VVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWN 379
Query: 402 ------------LSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALH 449
++D+ V S+ ++PDV + ++L C +E G+++ L
Sbjct: 380 VMISSYISVGNWFKAVEVYDQMV----SVGVKPDVVTFTSVLPACSQLAALEKGKQIHLS 435
Query: 450 LIDLEPHNHAFYMN-LCDIYGKAGRFDAAKRIRNLLKERRV 489
+ + ++ L D+Y K G A RI N + ++ V
Sbjct: 436 ISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDV 476
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/422 (33%), Positives = 226/422 (53%), Gaps = 33/422 (7%)
Query: 112 KKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTC 171
KKM+ + P+ P K C G VH +K G+ +DVF G+SL+++Y C
Sbjct: 105 KKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKC 164
Query: 172 GLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLV 231
G + ARK+FDE+P +VVTW+ M+ GY
Sbjct: 165 GEIVYARKMFDEMPQRNVVTWSGMMYGY-------------------------------A 193
Query: 232 QGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVV 291
Q G +EAL LF E ++ + + +SV+S CA ++ G+ +H ++ +
Sbjct: 194 QMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSF 253
Query: 292 IGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAG 351
+G++LV++Y KCG+ + A+++F E+P K+ W AM+ +A H K + F M+ +G
Sbjct: 254 VGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSG 313
Query: 352 VKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDES 411
+KPN +TF+ +L+AC+H+GLV++GR+ FD MK IEP HYA +VD+L RA E+
Sbjct: 314 MKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQEA 372
Query: 412 VILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKA 471
+ +I +MP++P VWGALL C +H N EL A + +L P + +++L + Y
Sbjct: 373 LEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAAD 432
Query: 472 GRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNE 531
GRF+ A + R LL++R +KK G S +E V F+AG K++ L L E
Sbjct: 433 GRFEDAAKARKLLRDRG-EKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEE 491
Query: 532 MK 533
M+
Sbjct: 492 ME 493
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 166/366 (45%), Gaps = 40/366 (10%)
Query: 129 LIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTD 188
L+ R G +H VVK G N+LIN Y L ++R+ F++ P
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 189 VVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQ 248
TW+S++ + +N + W S LE +M
Sbjct: 81 STTWSSIISCF-----------------AQNELPWMS--------------LEFLKKMMA 109
Query: 249 ISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQ 308
+++PD + S +CA L D G+ VH + G + DV +G++LV+MY KCG +
Sbjct: 110 GNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVY 169
Query: 309 AFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAH 368
A ++F+EMP+++ W+ M+ +A G +A F E + N +F ++S CA+
Sbjct: 170 ARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCAN 229
Query: 369 SGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWG 428
S L+E GR + + + + +V L S+ + + + + +P++ ++ +W
Sbjct: 230 STLLELGRQIHG-LSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWN 287
Query: 429 ALLGGCQMHGN----VELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLL 484
A+L H + +EL ++ + L ++P N ++N+ + AG D + + +
Sbjct: 288 AMLKAYAQHSHTQKVIELFKR--MKLSGMKP-NFITFLNVLNACSHAGLVDEGRYYFDQM 344
Query: 485 KERRVQ 490
KE R++
Sbjct: 345 KESRIE 350
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 132/274 (48%), Gaps = 37/274 (13%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
++K G YA +F + ++ ++ M+ YA M ++ A+ L+K+ L + +
Sbjct: 161 YAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEE-----ALWLFKEALFENLAV 215
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
N +F +I C G +H +K F S F G+SL++LY CG+ A ++F
Sbjct: 216 NDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVF 275
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
+E+PV ++ WN+M+ Y ++ ++LF++M ++G+
Sbjct: 276 NEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMK----------LSGM----------- 314
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
KP+ IT +VL+AC+ G +D G++ ++ + IE +LV+M G
Sbjct: 315 ----------KPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLG 364
Query: 302 KCGLVQQAFEIFEEMPEKDT-SAWTAMISVFALH 334
+ G +Q+A E+ MP T S W A+++ +H
Sbjct: 365 RAGRLQEALEVITNMPIDPTESVWGALLTSCTVH 398
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/301 (40%), Positives = 184/301 (61%), Gaps = 1/301 (0%)
Query: 187 TDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEM 246
T + N ++ Y + ++ L LF ++ +ISWNS+I+G VQ G A A E+FH+M
Sbjct: 380 TKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQM 439
Query: 247 QQIS-VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGL 305
+ PD ITIAS+L+ C+QL ++ GK +H Y RN E + + TAL++MY KCG
Sbjct: 440 MLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGN 499
Query: 306 VQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSA 365
QA +F+ + T+ W +MIS ++L GL +A C+LEM G+KP+ +TF+G+LSA
Sbjct: 500 EVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSA 559
Query: 366 CAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVY 425
C H G V++G+ CF M + + I P + HYA MV LL RA LF E++ LI M ++PD
Sbjct: 560 CNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSA 619
Query: 426 VWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLK 485
VWGALL C +H +E+GE VA + L+ N Y+ + ++Y +D R+RN++K
Sbjct: 620 VWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMK 679
Query: 486 E 486
+
Sbjct: 680 D 680
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 119/260 (45%), Gaps = 33/260 (12%)
Query: 108 MVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEI--VHAQVVKFGFLSDVFNGNSLI 165
+ +++ +L + PN T ++ T + ++ V + K G V+ SL+
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLL 92
Query: 166 NLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNS 225
NLY+ G +++A+ LFDE+P D V WN+++ GY RN
Sbjct: 93 NLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN----------------------- 129
Query: 226 IITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNG 285
G +A +LF M Q P T+ ++L C Q G + G+ VH ++G
Sbjct: 130 --------GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSG 181
Query: 286 IECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFL 345
+E D + AL++ Y KC + A +F EM +K T +W MI ++ GL +A F
Sbjct: 182 LELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFK 241
Query: 346 EMERAGVKPNHVTFVGLLSA 365
M V+ + VT + LLSA
Sbjct: 242 NMFEKNVEISPVTIINLLSA 261
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 163/388 (42%), Gaps = 50/388 (12%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ K G T A +F + D V+N +I Y+ + + C A L+ ML G P
Sbjct: 95 YLKKGCVTSAQMLFDEMPERDTVVWNALICGYS-----RNGYECDAWKLFIVMLQQGFSP 149
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ T L+ C + + G VH K G D N+LI+ Y C L +A LF
Sbjct: 150 SATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLF 209
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
E+ V+WN+M+ Y ++G + A+ +F+ M KN
Sbjct: 210 REMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKN---------------------- 247
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
+ + P +TI ++LSA + H + +H + + G+ D+ + T+LV Y
Sbjct: 248 -------VEISP--VTIINLLSA-----HVSH-EPLHCLVVKCGMVNDISVVTSLVCAYS 292
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
+CG + A ++ + T+++S +A G A F + + +K + V VG
Sbjct: 293 RCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVG 352
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVD-LLSRARLFD--ESVILIRSM 418
+L C S ++ G + Y I+ + +V+ L++ FD E+V+ +
Sbjct: 353 ILHGCKKSSHIDIG-----MSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQ 407
Query: 419 PMEPDVYVWGALLGGCQMHGNVELGEKV 446
E + W +++ GC G +V
Sbjct: 408 LQETPLISWNSVISGCVQSGRASTAFEV 435
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 113/226 (50%), Gaps = 10/226 (4%)
Query: 218 KNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKW- 276
+++ ++S++ + G ++ + +F ++ + S+ P+ T++ L A + + K
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTT--SFNSFKLQ 68
Query: 277 ---VHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFAL 333
V ++L ++G++ V + T+L+N+Y K G V A +F+EMPE+DT W A+I ++
Sbjct: 69 VEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR 128
Query: 334 HGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYL-IEPQV 392
+G A+ F+ M + G P+ T V LL C G V QGR V + L ++ QV
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQV 188
Query: 393 YHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHG 438
+ ++ S+ + +L R M + V W ++G G
Sbjct: 189 KN--ALISFYSKCAELGSAEVLFREMKDKSTV-SWNTMIGAYSQSG 231
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 33/228 (14%)
Query: 109 VLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLY 168
V ++ ML G+ P+ +T L+ GC++ G+ +H ++ F ++ F +LI++Y
Sbjct: 435 VFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMY 494
Query: 169 MTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIIT 228
CG A +F I TWNSM+ GY +
Sbjct: 495 AKCGNEVQAESVFKSIKAPCTATWNSMISGYSLS-------------------------- 528
Query: 229 GLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGK-WVHSYLRRNGIE 287
GL AL + EM++ +KPD+IT VLSAC G +D GK + ++ GI
Sbjct: 529 -----GLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGIS 583
Query: 288 CDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK-DTSAWTAMISVFALH 334
+ +V + G+ L +A + +M K D++ W A++S +H
Sbjct: 584 PTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIH 631
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 244 bits (624), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 149/481 (30%), Positives = 247/481 (51%), Gaps = 41/481 (8%)
Query: 58 FSCSFSKYGSFTYATNVFHMINN-PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLC 116
F +SK G A +VF+ ++ D +N MI AY + +A+ LYK+M+
Sbjct: 179 FVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYG-----QHKEGAKALALYKEMIF 233
Query: 117 DGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCG---L 173
G + T ++ T G H +++K GF + G+ LI+ Y CG
Sbjct: 234 KGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDG 293
Query: 174 LSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQG 233
+ ++ K+F EI D+V WN+M+ GY MN +
Sbjct: 294 MYDSEKVFQEILSPDLVVWNTMISGY--------------SMNEE--------------- 324
Query: 234 GLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECD-VVI 292
L++EA++ F +MQ+I +PD + V SAC+ L + K +H ++ I + + +
Sbjct: 325 -LSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISV 383
Query: 293 GTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGV 352
AL+++Y K G +Q A +F+ MPE + ++ MI +A HG G +A + M +G+
Sbjct: 384 NNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGI 443
Query: 353 KPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESV 412
PN +TFV +LSACAH G V++G+ F+ MK + IEP+ HY+CM+DLL RA +E+
Sbjct: 444 APNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAE 503
Query: 413 ILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAG 472
I +MP +P W ALLG C+ H N+ L E+ A L+ ++P Y+ L ++Y A
Sbjct: 504 RFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADAR 563
Query: 473 RFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEM 532
+++ +R ++ +R++KK PGCS IE+ F A S ++++ L+ + +M
Sbjct: 564 KWEEMASVRKSMRGKRIRKK-PGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKM 622
Query: 533 K 533
K
Sbjct: 623 K 623
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 131/526 (24%), Positives = 215/526 (40%), Gaps = 104/526 (19%)
Query: 4 ISLIESKSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFS 63
+ I + S L N L +C L R PN+ S Y++I + +++
Sbjct: 35 VKSIVASSTYLSNHFVNLYSKCGRL-SYARAAFYSTEEPNVFS---YNVIVK-----AYA 85
Query: 64 KYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNC 123
K A +F I PD YN +I YA D R AMVL+K+M G +
Sbjct: 86 KDSKIHIARQLFDEIPQPDTVSYNTLISGYA-----DARETFAAMVLFKRMRKLGFEVDG 140
Query: 124 LTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF-- 181
T LI C +D + +H V GF S N+ + Y GLL A +F
Sbjct: 141 FTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYG 198
Query: 182 -DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
DE+ D V+WNSM++ Y ++ AL L+++M I G
Sbjct: 199 MDEL--RDEVSWNSMIVAYGQHKEGAKALALYKEM----------IFKGF---------- 236
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
K D T+ASVL+A L + G+ H L + G + +G+ L++ Y
Sbjct: 237 -----------KIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFY 285
Query: 301 GKCGLVQQAFE---IFEEMPEKDTSAWTAMISVFALH-GLGWKAFDCFLEMERAGVKPNH 356
KCG ++ +F+E+ D W MIS ++++ L +A F +M+R G +P+
Sbjct: 286 SKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDD 345
Query: 357 VTFVGLLSACAH------------------------------------SGLVEQGRWCFD 380
+FV + SAC++ SG ++ RW FD
Sbjct: 346 CSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFD 405
Query: 381 VMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSM---PMEPDVYVWGALLGGCQMH 437
M + + + CM+ ++ E+++L + M + P+ + A+L C
Sbjct: 406 RMPELNAVS-----FNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHC 460
Query: 438 GNVELGEK---VALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
G V+ G++ +EP Y + D+ G+AG+ + A+R
Sbjct: 461 GKVDEGQEYFNTMKETFKIEPEAE-HYSCMIDLLGRAGKLEEAERF 505
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 151/340 (44%), Gaps = 14/340 (4%)
Query: 125 TFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEI 184
TF L+ D +G+ +HA VK S + N +NLY CG LS AR F
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 185 PVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFH 244
+V ++N +V Y ++ + A LF ++ + +S+N++I+G A+ LF
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 245 EMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCG 304
M+++ + D T++ +++AC +D K +H + G + + A V Y K G
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 305 LVQQAFEIFEEMPE-KDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLL 363
L+++A +F M E +D +W +MI + H G KA + EM G K + T +L
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 364 SACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYAC-MVDLLSRA----RLFDESVILIRSM 418
+A + GR + + Q H ++D S+ ++D +
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGF--HQNSHVGSGLIDFYSKCGGCDGMYDSEKVF--QE 303
Query: 419 PMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNH 458
+ PD+ VW ++ G M N EL E+ ++ H
Sbjct: 304 ILSPDLVVWNTMISGYSM--NEELSEEAVKSFRQMQRIGH 341
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 145/491 (29%), Positives = 244/491 (49%), Gaps = 42/491 (8%)
Query: 20 RLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVF-HMI 78
R+++ C ++++L++IH+ ++ + H ++ + R C+ S GS ++A +F H
Sbjct: 10 RMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRF---CAVSVTGSLSHAQLLFDHFD 66
Query: 79 NNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF-PNCLTFPFLIKGCTRWM 137
++P +N +IR ++ + +++ Y +ML + P+ TF F +K C R
Sbjct: 67 SDPSTSDWNYLIRGFSNSSSPLN-----SILFYNRMLLSSVSRPDLFTFNFALKSCERIK 121
Query: 138 DGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVI 197
+H V++ GFL D SL+ Y
Sbjct: 122 SIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSA--------------------------- 154
Query: 198 GYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKIT 257
NG ++ A +F +M ++++SWN +I GL +AL ++ M V D T
Sbjct: 155 ----NGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYT 210
Query: 258 IASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMP 317
+ ++LS+CA + A++ G +H E V + AL++MY KCG ++ A +F M
Sbjct: 211 LVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMR 270
Query: 318 EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRW 377
++D W +MI + +HG G +A F +M +GV+PN +TF+GLL C+H GLV++G
Sbjct: 271 KRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVE 330
Query: 378 CFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMH 437
F++M + + P V HY CMVDL RA + S+ +I + D +W LLG C++H
Sbjct: 331 HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIH 390
Query: 438 GNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCS 497
N+ELGE L+ LE N Y+ + IY A A +R L++ +Q +PG S
Sbjct: 391 RNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQ-TVPGWS 449
Query: 498 MIEINGVVQEF 508
IEI V +F
Sbjct: 450 WIEIGDQVHKF 460
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 127/284 (44%), Gaps = 10/284 (3%)
Query: 164 LINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLR------NGGLDNALDLFRKMNG 217
++ + C + RK+ + + + S+ LR G L +A LF +
Sbjct: 8 IVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDS 67
Query: 218 KNIIS-WNSIITGLVQGGLAKEALELFHEMQQISV-KPDKITIASVLSACAQLGAIDHGK 275
S WN +I G ++ ++ M SV +PD T L +C ++ +I
Sbjct: 68 DPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCL 127
Query: 276 WVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHG 335
+H + R+G D ++ T+LV Y G V+ A ++F+EMP +D +W MI F+ G
Sbjct: 128 EIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVG 187
Query: 336 LGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHY 395
L +A + M GV + T V LLS+CAH + G + + E V+
Sbjct: 188 LHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIR-CESCVFVS 246
Query: 396 ACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGN 439
++D+ ++ + ++ + M + DV W +++ G +HG+
Sbjct: 247 NALIDMYAKCGSLENAIGVFNGM-RKRDVLTWNSMIIGYGVHGH 289
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 124/257 (48%), Gaps = 15/257 (5%)
Query: 3 MISLIESKSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSF 62
++S + L N + E+ K++ + IH ++ S L + ++ L C +
Sbjct: 98 LLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDA----IVATSLVRC-Y 152
Query: 63 SKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPN 122
S GS A+ VF + DL +N+MI ++ + G+ ++ A+ +YK+M +G+ +
Sbjct: 153 SANGSVEIASKVFDEMPVRDLVSWNVMICCFSHV-GLHNQ----ALSMYKRMGNEGVCGD 207
Query: 123 CLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFD 182
T L+ C G ++H S VF N+LI++Y CG L NA +F+
Sbjct: 208 SYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFN 267
Query: 183 EIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKE 238
+ DV+TWNSM+IGY +G A+ FRKM N I++ ++ G GL KE
Sbjct: 268 GMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKE 327
Query: 239 ALELFHEM-QQISVKPD 254
+E F M Q + P+
Sbjct: 328 GVEHFEIMSSQFHLTPN 344
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 144/474 (30%), Positives = 247/474 (52%), Gaps = 39/474 (8%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+SK G A VF + + N +I Y+ + A+VL+++ML G+ P
Sbjct: 574 YSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS------QNNLEEAVVLFQEMLTRGVNP 627
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSD-VFNGNSLINLYMTCGLLSNARKL 180
+ +TF +++ C + G H Q+ K GF S+ + G SL+ +YM ++ A L
Sbjct: 628 SEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACAL 687
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
F E+ + K+I+ W +++G Q G +EAL
Sbjct: 688 FSELS------------------------------SPKSIVLWTGMMSGHSQNGFYEEAL 717
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
+ + EM+ V PD+ T +VL C+ L ++ G+ +HS + + D + L++MY
Sbjct: 718 KFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMY 777
Query: 301 GKCGLVQQAFEIFEEMPEK-DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
KCG ++ + ++F+EM + + +W ++I+ +A +G A F M ++ + P+ +TF
Sbjct: 778 AKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITF 837
Query: 360 VGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP 419
+G+L+AC+H+G V GR F++M Y IE +V H ACMVDLL R E+ I +
Sbjct: 838 LGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQN 897
Query: 420 MEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKR 479
++PD +W +LLG C++HG+ GE A LI+LEP N + Y+ L +IY G ++ A
Sbjct: 898 LKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANA 957
Query: 480 IRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
+R ++++R V KK+PG S I++ F+AG S + + + L+ L + MK
Sbjct: 958 LRKVMRDRGV-KKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMK 1010
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 194/408 (47%), Gaps = 47/408 (11%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYA--GMDGVDDRHFCRAMVLYKKMLCDGI 119
++K +YA F + D+ +N M+ Y+ G G R F + + I
Sbjct: 105 YAKCAQVSYAEKQFDFLEK-DVTAWNSMLSMYSSIGKPGKVLRSFV-------SLFENQI 156
Query: 120 FPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARK 179
FPN TF ++ C R + G +H ++K G + + G +L+++Y C +S+AR+
Sbjct: 157 FPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARR 216
Query: 180 LFDEIPVTDVVTWNSMVIG-----------------------------------YLRNGG 204
+F+ I + V W + G Y+R G
Sbjct: 217 VFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGK 276
Query: 205 LDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSA 264
L +A LF +M+ ++++WN +I+G + G A+E F M++ SVK + T+ SVLSA
Sbjct: 277 LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 265 CAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAW 324
+ +D G VH+ + G+ ++ +G++LV+MY KC ++ A ++FE + EK+ W
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFW 396
Query: 325 TAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKR 384
AMI +A +G K + F++M+ +G + TF LLS CA S +E G ++ +
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIK 456
Query: 385 VYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLG 432
L + ++ +VD+ ++ +++ + M + D W ++G
Sbjct: 457 KKLAK-NLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTIIG 502
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 171/381 (44%), Gaps = 39/381 (10%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+SK A VF + + +N MIR YA +G + H + M L+ M G
Sbjct: 372 YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYA-HNG--ESH--KVMELFMDMKSSGYNI 426
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ TF L+ C D G H+ ++K ++F GN+L+++Y CG
Sbjct: 427 DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCG--------- 477
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
L++A +F +M ++ ++WN+II VQ EA +
Sbjct: 478 ----------------------ALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFD 515
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
LF M + D +AS L AC + + GK VH + G++ D+ G++L++MY
Sbjct: 516 LFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYS 575
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KCG+++ A ++F +PE + A+I+ ++ + L +A F EM GV P+ +TF
Sbjct: 576 KCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFAT 634
Query: 362 LLSACAHSGLVEQG-RWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
++ AC + G ++ + KR + E + Y ++ + +R E+ L +
Sbjct: 635 IVEACHKPESLTLGTQFHGQITKRGFSSEGE-YLGISLLGMYMNSRGMTEACALFSELSS 693
Query: 421 EPDVYVWGALLGGCQMHGNVE 441
+ +W ++ G +G E
Sbjct: 694 PKSIVLWTGMMSGHSQNGFYE 714
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 170/389 (43%), Gaps = 41/389 (10%)
Query: 48 DQYHLITRLLFSCSFSKY---GSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHF 104
D+ H L F + Y G A +F +++PD+ +N+MI + G G +
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGH-GKRGCE---- 308
Query: 105 CRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSL 164
A+ + M + T ++ + G +VHA+ +K G S+++ G+SL
Sbjct: 309 TVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSL 368
Query: 165 INLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWN 224
+++Y C + A K+F+ + KN + WN
Sbjct: 369 VSMYSKCEKMEAAAKVFE-------------------------------ALEEKNDVFWN 397
Query: 225 SIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRN 284
++I G G + + +ELF +M+ D T S+LS CA ++ G HS + +
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK 457
Query: 285 GIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCF 344
+ ++ +G ALV+MY KCG ++ A +IFE M ++D W +I + +AFD F
Sbjct: 458 KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLF 517
Query: 345 LEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSR 404
M G+ + L AC H + QG+ + + L + ++ + ++D+ S+
Sbjct: 518 KRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGL-DRDLHTGSSLIDMYSK 576
Query: 405 ARLFDESVILIRSMPMEPDVYVWGALLGG 433
+ ++ + S+P E V AL+ G
Sbjct: 577 CGIIKDARKVFSSLP-EWSVVSMNALIAG 604
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 192/444 (43%), Gaps = 67/444 (15%)
Query: 55 RLLFSCSFSKYGSFTYATNVFHMINNPDL--RVYNIMIRAYAGMDGVDDR--HFCRAMV- 109
R+L + S + + SF++ V + +PDL R+Y ++ ++ D + R C
Sbjct: 4 RVLLTPSSAMFDSFSF---VRRLSYSPDLGRRIYGHVLPSH---DQIHQRLLEICLGQCK 57
Query: 110 LYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYM 169
L+K P L I G+ VH++ + G S+ GN++++LY
Sbjct: 58 LFKSRKVFDEMPQRLALALRI-----------GKAVHSKSLILGIDSEGRLGNAIVDLYA 106
Query: 170 TCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITG 229
C +S A K FD + DV WNSM+ Y +SI
Sbjct: 107 KCAQVSYAEKQFDFLE-KDVTAWNSMLSMY------------------------SSI--- 138
Query: 230 LVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECD 289
G + L F + + + P+K T + VLS CA+ ++ G+ +H + + G+E +
Sbjct: 139 ----GKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 290 VVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMER 349
G ALV+MY KC + A +FE + + +T WT + S + GL +A F M
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 350 AGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFD 409
G +P+H+ FV +++ G ++ R F M P V + M+ +
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMIS--GHGKRGC 307
Query: 410 ESVIL-----IRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFY-MN 463
E+V + +R ++ G++L + N++LG V I L ++ + +
Sbjct: 308 ETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSS 367
Query: 464 LCDIYGKAGRFDAAKRIRNLLKER 487
L +Y K + +AA ++ L+E+
Sbjct: 368 LVSMYSKCEKMEAAAKVFEALEEK 391
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 145/459 (31%), Positives = 231/459 (50%), Gaps = 39/459 (8%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFC-RAMVLYKKMLCDGIF 120
+++ G + A VF+ + D+ ++ MI + FC A+ L+ +M +
Sbjct: 292 YTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFC------QNGFCNEAVDLFIRMREAFVV 345
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
PN T ++ GC GE +H VVK GF D++ N+LI++Y C
Sbjct: 346 PNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCE-------- 397
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
+D A+ LF +++ KN +SWN++I G G +A
Sbjct: 398 -----------------------KMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAF 434
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
+F E + V ++T +S L ACA L ++D G VH + V + +L++MY
Sbjct: 435 SMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMY 494
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
KCG ++ A +F EM D ++W A+IS ++ HGLG +A M+ KPN +TF+
Sbjct: 495 AKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFL 554
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
G+LS C+++GL++QG+ CF+ M R + IEP + HY CMV LL R+ D+++ LI +P
Sbjct: 555 GVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPY 614
Query: 421 EPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
EP V +W A+L N E + A ++ + P + A Y+ + ++Y A ++ I
Sbjct: 615 EPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASI 674
Query: 481 RNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMK 519
R +KE V+K+ PG S IE G V FS G S MK
Sbjct: 675 RKSMKEMGVKKE-PGLSWIEHQGDVHYFSVGLSDHPDMK 712
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 182/402 (45%), Gaps = 60/402 (14%)
Query: 61 SFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF 120
++S GS A VF I D+ V+ ++ Y V++ +F ++ L M G
Sbjct: 190 AYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY-----VENGYFEDSLKLLSCMRMAGFM 244
Query: 121 PNCLTFPFLIKGCTRW--MDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNAR 178
PN TF +K D A G VH Q++K ++ D G L+ LY G +S+A
Sbjct: 245 PNNYTFDTALKASIGLGAFDFAKG--VHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAF 302
Query: 179 KLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKE 238
K+F+E+P DVV W+ M+ + +NG + A+DLF +M +E
Sbjct: 303 KVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM---------------------RE 341
Query: 239 ALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVN 298
A V P++ T++S+L+ CA G+ +H + + G + D+ + AL++
Sbjct: 342 AF----------VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALID 391
Query: 299 MYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVT 358
+Y KC + A ++F E+ K+ +W +I + G G KAF F E R V VT
Sbjct: 392 VYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVT 451
Query: 359 FVGLLSACAHSGLVEQGRWCFDV------MKRVYLIEPQVYHYACMVDLLSRARLFDESV 412
F L ACA ++ G + K+V + + YA D+ +F+E
Sbjct: 452 FSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNE-- 509
Query: 413 ILIRSMPMEP-DVYVWGALLGGCQMHGNVELGEKVALHLIDL 453
ME DV W AL+ G HG LG + AL ++D+
Sbjct: 510 -------METIDVASWNALISGYSTHG---LGRQ-ALRILDI 540
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 174/422 (41%), Gaps = 80/422 (18%)
Query: 145 VHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGG 204
+H+ +VK G+ S+ F G +LIN Y CG + +AR +F+ I
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILC------------------ 209
Query: 205 LDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSA 264
K+I+ W I++ V+ G +++L+L M+ P+ T + L A
Sbjct: 210 -------------KDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKA 256
Query: 265 CAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAW 324
LGA D K VH + + D +G L+ +Y + G + AF++F EMP+ D W
Sbjct: 257 SIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPW 316
Query: 325 TAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKR 384
+ MI+ F +G +A D F+ M A V PN T +L+ CA G ++ +
Sbjct: 317 SFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVK 376
Query: 385 VYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDV-------------------- 424
V + +Y ++D+ ++ D +V L + + +V
Sbjct: 377 VGF-DLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFS 435
Query: 425 --------------YVWGALLGGCQMHGNVELGEKVALHLIDLEPHNH---AFYMNLCDI 467
+ + LG C +++LG V +H + ++ +N A +L D+
Sbjct: 436 MFREALRNQVSVTEVTFSSALGACASLASMDLG--VQVHGLAIKTNNAKKVAVSNSLIDM 493
Query: 468 YGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDR 527
Y K G A+ + N ++ V N ++ +S G ++ L ++ DR
Sbjct: 494 YAKCGDIKFAQSVFNEMETIDVA---------SWNALISGYSTHGLGRQALRILDIMKDR 544
Query: 528 LC 529
C
Sbjct: 545 DC 546
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 160/400 (40%), Gaps = 71/400 (17%)
Query: 117 DGIFPNCLTFPF--LIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLL 174
D I P + + +++ C + D S + +H ++K G D+F N L+N Y+ G
Sbjct: 41 DSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAG-- 98
Query: 175 SNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGG 234
FD+ +AL+LF +M +N +S+ L QG
Sbjct: 99 ------FDK-----------------------DALNLFDEMPERNNVSF----VTLAQGY 125
Query: 235 LAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGT 294
++ + L+ + + + + S L L + W+HS + + G + + +G
Sbjct: 126 ACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGA 185
Query: 295 ALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKP 354
AL+N Y CG V A +FE + KD W ++S + +G + M AG P
Sbjct: 186 ALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMP 245
Query: 355 NHVTFVGLLSACAHSGLVEQGRWCF-DVMKRVYLIEPQV-----YHYACMVDLLSRARLF 408
N+ TF L A G + + ++K Y+++P+V Y + D+ ++F
Sbjct: 246 NNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVF 305
Query: 409 DES---------------------------VILIRSMPMEPDVYVWGALLGGCQMHGNVE 441
+E I +R + P+ + ++L GC +
Sbjct: 306 NEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSG 365
Query: 442 LGEKVALHLIDLEPHNHAFYMN-LCDIYGKAGRFDAAKRI 480
LGE++ ++ + + N L D+Y K + D A ++
Sbjct: 366 LGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKL 405
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 242 bits (617), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 146/466 (31%), Positives = 234/466 (50%), Gaps = 42/466 (9%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKML-CDGIF 120
+SKYG +YA +F+ + ++ +N+MI YA V D C ++KM +G+
Sbjct: 277 YSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLC-----FQKMSEQNGLQ 331
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
P+ +T L+ G +H ++ GFL + +LI++Y CG L +A +
Sbjct: 332 PDVITSINLLPASAI----LEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVI 387
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
FD +M KN+ISWNSII VQ G AL
Sbjct: 388 FD-------------------------------RMAEKNVISWNSIIAAYVQNGKNYSAL 416
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
ELF E+ S+ PD TIAS+L A A+ ++ G+ +H+Y+ ++ + +I +LV+MY
Sbjct: 417 ELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMY 476
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
CG ++ A + F + KD +W ++I +A+HG G + F EM + V PN TF
Sbjct: 477 AMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFA 536
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
LL+AC+ SG+V++G F+ MKR Y I+P + HY CM+DL+ R F + + MP
Sbjct: 537 SLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPF 596
Query: 421 EPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
P +WG+LL + H ++ + E A + +E N Y+ L ++Y +AGR++ RI
Sbjct: 597 VPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRI 656
Query: 481 RNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILD 526
+ LL E + + S +E G F+ G S + + +LD
Sbjct: 657 K-LLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLD 701
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 186/371 (50%), Gaps = 46/371 (12%)
Query: 71 ATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLI 130
A +F +N D ++N+MI+ + G+ + A+ Y +M+ G+ + T+PF+I
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSC-GL----YIEAVQFYSRMVFAGVKADTFTYPFVI 137
Query: 131 KGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVV 190
K G+ +HA V+K GF+SDV+ NSLI+LYM G +A K+F+E+P D+V
Sbjct: 138 KSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIV 197
Query: 191 TWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQIS 250
+WNSM+ GYL G D F +L LF EM +
Sbjct: 198 SWNSMISGYLALG------DGF-------------------------SSLMLFKEMLKCG 226
Query: 251 VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIEC-DVVIGTALVNMYGKCGLVQQA 309
KPD+ + S L AC+ + + GK +H + R+ IE DV++ T++++MY K G V A
Sbjct: 227 FKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYA 286
Query: 310 FEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEM-ERAGVKPNHVTFVGLLSACAH 368
IF M +++ AW MI +A +G AF CF +M E+ G++P+ +T + LL A A
Sbjct: 287 ERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA- 345
Query: 369 SGLVEQGRWCFD-VMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVW 427
+ +GR M+R +L P + ++D+ + ++ M E +V W
Sbjct: 346 ---ILEGRTIHGYAMRRGFL--PHMVLETALIDMYGECGQLKSAEVIFDRMA-EKNVISW 399
Query: 428 GALLGGCQMHG 438
+++ +G
Sbjct: 400 NSIIAAYVQNG 410
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 171/369 (46%), Gaps = 44/369 (11%)
Query: 160 NGNSLINLYMTCGLLSNAR-KLFDEIPVTDVVTWNSM---VIGYLRNGGLDNALDLFRKM 215
NGN NL G+ AR L D VT V ++ + G+ + +++AL LF +M
Sbjct: 33 NGNR--NLEFDSGISKPARLVLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEM 90
Query: 216 NGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGK 275
N + WN +I G GL EA++ + M VK D T V+ + A + +++ GK
Sbjct: 91 NKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGK 150
Query: 276 WVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHG 335
+H+ + + G DV + +L+++Y K G A ++FEEMPE+D +W +MIS + G
Sbjct: 151 KIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALG 210
Query: 336 LGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGR--WCFDVMKRVYLIEPQVY 393
G+ + F EM + G KP+ + + L AC+H + G+ C V R+ + V
Sbjct: 211 DGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMV- 269
Query: 394 HYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNV--------ELGEK 445
++D+ S+ + + M ++ ++ W ++G +G V ++ E+
Sbjct: 270 -MTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQ 327
Query: 446 VALH-----LIDLEPHN--------HAFYMN------------LCDIYGKAGRFDAAKRI 480
L I+L P + H + M L D+YG+ G+ +A+ I
Sbjct: 328 NGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVI 387
Query: 481 RNLLKERRV 489
+ + E+ V
Sbjct: 388 FDRMAEKNV 396
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 145/332 (43%), Gaps = 50/332 (15%)
Query: 51 HLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVL 110
H++ + + G A +F + ++ +N +I AY V + A+ L
Sbjct: 364 HMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAY-----VQNGKNYSALEL 418
Query: 111 YKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMT 170
++++ + P+ T ++ + + G +HA +VK + S+ NSL+++Y
Sbjct: 419 FQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAM 478
Query: 171 CGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGL 230
CG L +ARK F+ I + DVV+WNS+++ Y +
Sbjct: 479 CGDLEDARKCFNHILLKDVVSWNSIIMAYAVH---------------------------- 510
Query: 231 VQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHG-KWVHSYLRRNGIECD 289
G + ++ LF EM V P+K T AS+L+AC+ G +D G ++ S R GI+
Sbjct: 511 ---GFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPG 567
Query: 290 VVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSA-WTAMISVFALH---GLGWKAFDCFL 345
+ ++++ G+ G A EEMP T+ W ++++ H + A +
Sbjct: 568 IEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIF 627
Query: 346 EMERAGVKPNHVTFVGLLSACAHSGLVEQGRW 377
+ME N +V LL+ A E GRW
Sbjct: 628 KMEH----DNTGCYVLLLNMYA-----EAGRW 650
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 150/455 (32%), Positives = 258/455 (56%), Gaps = 16/455 (3%)
Query: 71 ATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLI 130
A VF I P+L V I A G + RH A +K++LC GI PN TF +I
Sbjct: 46 AHKVFDEI--PELDV--ISATAVIGRFVKESRH-VEASQAFKRLLCLGIRPNEFTFGTVI 100
Query: 131 KGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVV 190
T D G+ +H +K G S+VF G++++N Y+ L++AR+ FD+ +VV
Sbjct: 101 GSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVV 160
Query: 191 TWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEM-QQI 249
+ +++ GYL+ + AL LFR M +++++WN++I G Q G +EA+ F +M ++
Sbjct: 161 SITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREG 220
Query: 250 SVKPDKITIASVLSACAQLGAIDHGKWVHS-YLRRNGIECDVVIGTALVNMYGKCGLVQQ 308
V P++ T ++A + + + GK +H+ ++ G +V + +L++ Y KCG ++
Sbjct: 221 VVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMED 280
Query: 309 AFEIFEEMPE--KDTSAWTAMISVFALHGLGWKAFDCFLEMER-AGVKPNHVTFVGLLSA 365
+ F ++ E ++ +W +MI +A +G G +A F +M + ++PN+VT +G+L A
Sbjct: 281 SLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFA 340
Query: 366 CAHSGLVEQGRWCFDVMKRVYLIEP---QVYHYACMVDLLSRARLFDESVILIRSMPMEP 422
C H+GL+++G F+ Y +P ++ HYACMVD+LSR+ F E+ LI+SMP++P
Sbjct: 341 CNHAGLIQEGYMYFNKAVNDY-DDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDP 399
Query: 423 DVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRN 482
+ W ALLGGCQ+H N L + A +++L+P + + Y+ L + Y + IR
Sbjct: 400 GIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRR 459
Query: 483 LLKERRVQKKIPGCSMIEINGVVQEF-SAGGSSEL 516
+KE + K+ GCS IE+ ++ F +A ++EL
Sbjct: 460 KMKETGL-KRFTGCSWIEVRDQIRVFVNADKNNEL 493
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 125/314 (39%), Gaps = 66/314 (21%)
Query: 168 YMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSII 227
++ L+ NA K+FDEIP DV IS ++I
Sbjct: 37 HIDSDLIRNAHKVFDEIPELDV-------------------------------ISATAVI 65
Query: 228 TGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIE 287
V+ EA + F + + ++P++ T +V+ + + GK +H Y + G+
Sbjct: 66 GRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLA 125
Query: 288 CDVVIGTALVNMYGKCGLV-------------------------------QQAFEIFEEM 316
+V +G+A++N Y K + ++A +F M
Sbjct: 126 SNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAM 185
Query: 317 PEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVK-PNHVTFVGLLSACAHSGLVEQG 375
PE+ W A+I F+ G +A + F++M R GV PN TF ++A ++ G
Sbjct: 186 PERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAG 245
Query: 376 RWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEP-DVYVWGALLGGC 434
+ + V+ + ++ S+ ++S++ + E ++ W +++ G
Sbjct: 246 KSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGY 305
Query: 435 QMHGNVELGEKVAL 448
+G E E VA+
Sbjct: 306 AHNGRGE--EAVAM 317
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 149/500 (29%), Positives = 254/500 (50%), Gaps = 45/500 (9%)
Query: 26 KNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRV 85
+ LR+ +R+H ++ + L ++ +L TRLL + K A V + ++
Sbjct: 66 RALRDGQRVHAHMIKTRYLPAT---YLRTRLLIF--YGKCDCLEDARKVLDEMPEKNVVS 120
Query: 86 YNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIV 145
+ MI Y+ H A+ ++ +M+ PN TF ++ C R G+ +
Sbjct: 121 WTAMISRYSQTG-----HSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQI 175
Query: 146 HAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGL 205
H +VK+ + S +F G+SL+++Y G + AR
Sbjct: 176 HGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAR--------------------------- 208
Query: 206 DNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSAC 265
++F + ++++S +II G Q GL +EALE+FH + + P+ +T AS+L+A
Sbjct: 209 ----EIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTAL 264
Query: 266 AQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWT 325
+ L +DHGK H ++ R + V+ +L++MY KCG + A +F+ MPE+ +W
Sbjct: 265 SGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWN 324
Query: 326 AMISVFALHGLGWKAFDCF-LEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVM-K 383
AM+ ++ HGLG + + F L + VKP+ VT + +LS C+H + + G FD M
Sbjct: 325 AMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVA 384
Query: 384 RVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELG 443
Y +P HY C+VD+L RA DE+ I+ MP +P V G+LLG C++H +V++G
Sbjct: 385 GEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIG 444
Query: 444 EKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEING 503
E V LI++EP N Y+ L ++Y AGR+ +R ++ ++ V K+ PG S I+
Sbjct: 445 ESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKE-PGRSWIQHEQ 503
Query: 504 VVQEFSAGGSSELPMKDLVL 523
+ F A + P ++ VL
Sbjct: 504 TLHYFHANDRTH-PRREEVL 522
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 133/295 (45%), Gaps = 37/295 (12%)
Query: 227 ITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGI 286
I+ L G +EAL EM + + ++L+AC A+ G+ VH+++ +
Sbjct: 27 ISQLCSNGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRY 83
Query: 287 ECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLE 346
+ T L+ YGKC ++ A ++ +EMPEK+ +WTAMIS ++ G +A F E
Sbjct: 84 LPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAE 143
Query: 347 MERAGVKPNHVTFVGLLSACAHS---GLVEQ-----GRWCFDV----------------- 381
M R+ KPN TF +L++C + GL +Q +W +D
Sbjct: 144 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 203
Query: 382 ---MKRVYLIEPQVYHYACMVDLLSRARL-FDESVI----LIRSMPMEPDVYVWGALLGG 433
+ ++ P+ +C + A+L DE + + S M P+ + +LL
Sbjct: 204 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 263
Query: 434 CQMHGNVELGEKVALHLIDLEPHNHAFYMN-LCDIYGKAGRFDAAKRIRNLLKER 487
++ G++ H++ E +A N L D+Y K G A+R+ + + ER
Sbjct: 264 LSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPER 318
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/475 (30%), Positives = 238/475 (50%), Gaps = 43/475 (9%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHF-CRAMVLYKKMLCDGIF 120
+S+ G F A +F + +++ ++ A + G R A+ + ++ML GI
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKM--DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKF-------GFLSDVFNGNSLINLYMTCGL 173
PN +T ++ GC G+ +H +K+ G + N LI++Y C
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 174 LSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQG 233
+ AR +FD + + +++++W +I G Q
Sbjct: 423 VDTARAMFDSLSPKE-----------------------------RDVVTWTVMIGGYSQH 453
Query: 234 GLAKEALELFHEM--QQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIEC-DV 290
G A +ALEL EM + +P+ TI+ L ACA L A+ GK +H+Y RN +
Sbjct: 454 GDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPL 513
Query: 291 VIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERA 350
+ L++MY KCG + A +F+ M K+ WT++++ + +HG G +A F EM R
Sbjct: 514 FVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRI 573
Query: 351 GVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDE 410
G K + VT + +L AC+HSG+++QG F+ MK V+ + P HYAC+VDLL RA +
Sbjct: 574 GFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNA 633
Query: 411 SVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGK 470
++ LI MPMEP VW A L C++HG VELGE A + +L ++ Y L ++Y
Sbjct: 634 ALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYAN 693
Query: 471 AGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLIL 525
AGR+ RIR+L++ + V+K+ PGCS +E F G + K++ +L
Sbjct: 694 AGRWKDVTRIRSLMRHKGVKKR-PGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVL 747
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 131/466 (28%), Positives = 214/466 (45%), Gaps = 89/466 (19%)
Query: 21 LIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINN 80
I +CK + ++K IH ++L+ L + HLI+ ++ G ++A ++
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGILTLNLTSHLIS------TYISVGCLSHAVSLLRRFPP 87
Query: 81 PDLRVY--NIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMD 138
D VY N +IR+Y G +G ++ + L+ M P+ TFPF+ K C
Sbjct: 88 SDAGVYHWNSLIRSY-GDNGCANK----CLYLFGLMHSLSWTPDNYTFPFVFKACGEISS 142
Query: 139 GASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIG 198
GE HA + GF+S+VF GN+L+ +Y C LS+ARK+FDE+ V DVV+WNS++
Sbjct: 143 VRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIES 202
Query: 199 YLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITI 258
Y + G AL++F +M + +PD IT+
Sbjct: 203 YAKLGKPKVALEMFSRMT------------------------------NEFGCRPDNITL 232
Query: 259 ASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPE 318
+VL CA LG GK +H + + + ++ +G LV+MY KCG++ +A +F M
Sbjct: 233 VNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSV 292
Query: 319 KDTSAWTAM-----------------------------------ISVFALHGLGWKAFDC 343
KD +W AM IS +A GLG++A
Sbjct: 293 KDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGV 352
Query: 344 FLEMERAGVKPNHVTFVGLLSACAHSGLVEQG--------RWCFDVMKRVYLIEPQVYHY 395
+M +G+KPN VT + +LS CA G + G ++ D+ K + E V +
Sbjct: 353 CRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQ 412
Query: 396 ACMVDLLSRARLFDESVILIRSM-PMEPDVYVWGALLGGCQMHGNV 440
++D+ ++ + D + + S+ P E DV W ++GG HG+
Sbjct: 413 --LIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 210/390 (53%), Gaps = 32/390 (8%)
Query: 125 TFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEI 184
T+ L++ C + + G+ +HAQ+ GF +N Y+ LL
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFA---------LNEYLKVKLL---------- 150
Query: 185 PVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFH 244
I Y +G L A LFR + +++I WN++I+G VQ GL +E L +++
Sbjct: 151 ------------ILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYY 198
Query: 245 EMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCG 304
+M+Q + PD+ T ASV AC+ L ++HGK H+ + + I+ ++++ +ALV+MY KC
Sbjct: 199 DMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCS 258
Query: 305 LVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLS 364
+F+++ ++ WT++IS + HG + CF +M+ G +PN VTF+ +L+
Sbjct: 259 SFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLT 318
Query: 365 ACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDV 424
AC H GLV++G F MKR Y IEP+ HYA MVD L RA E+ + P +
Sbjct: 319 ACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHP 378
Query: 425 YVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLL 484
VWG+LLG C++HGNV+L E A ++L+P N Y+ + Y G +AA ++R +
Sbjct: 379 PVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKM 438
Query: 485 KERRVQKKIPGCSMIEINGVVQEFSAGGSS 514
+ V KK PG S IE+ G V F +S
Sbjct: 439 ENAGV-KKDPGYSQIELQGEVHRFMKDDTS 467
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 155/358 (43%), Gaps = 56/358 (15%)
Query: 21 LIEQCKNLREL---KRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHM 77
L+++CK +E KRIH Q+ + + +L +LL + S G A +F
Sbjct: 114 LLQECKQRKEYTKGKRIHAQMFV---VGFALNEYLKVKLLILYALS--GDLQTAGILFRS 168
Query: 78 INNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWM 137
+ DL +N MI Y G++ + +Y M + I P+ TF + + C+
Sbjct: 169 LKIRDLIPWNAMISGYV-QKGLEQE----GLFIYYDMRQNRIVPDQYTFASVFRACSALD 223
Query: 138 DGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVI 197
G+ HA ++K S++ ++L+++Y C S+ ++FD++ +V+TW S++
Sbjct: 224 RLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLIS 283
Query: 198 GYLRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQISVKP 253
GY +G + L F KM + N +++ ++T GGL + E F+ M+
Sbjct: 284 GYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMK------ 337
Query: 254 DKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIF 313
R GIE + A+V+ G+ G +Q+A+E
Sbjct: 338 ----------------------------RDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFV 369
Query: 314 EEMPEKD-TSAWTAMISVFALHG---LGWKAFDCFLEMERAGVKPNHVTFVGLLSACA 367
+ P K+ W +++ +HG L A FLE++ N+V F ++C
Sbjct: 370 MKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTN-GGNYVVFANGYASCG 426
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 7/242 (2%)
Query: 200 LRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIA 259
LR + + F+ N + + + GL G KEA+ L + V+P+ T A
Sbjct: 56 LRRMLAEKRIGRFQVENQRKTEKLDKTLKGLCVTGRLKEAVGLLWS-SGLQVEPE--TYA 112
Query: 260 SVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK 319
+L C Q GK +H+ + G + + L+ +Y G +Q A +F + +
Sbjct: 113 VLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIR 172
Query: 320 DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCF 379
D W AMIS + GL + + +M + + P+ TF + AC+ +E G+
Sbjct: 173 DLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAH 232
Query: 380 DVM-KRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHG 438
VM KR I+ + + +VD+ + F + + + +V W +L+ G HG
Sbjct: 233 AVMIKRC--IKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR-NVITWTSLISGYGYHG 289
Query: 439 NV 440
V
Sbjct: 290 KV 291
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 144/506 (28%), Positives = 270/506 (53%), Gaps = 16/506 (3%)
Query: 24 QCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDL 83
Q +L K IH+ IL L + L S ++++G + A F +++ D+
Sbjct: 342 QLTDLASGKEIHSYILRHSYLLEDTS---VGNALISF-YARFGDTSAAYWAFSLMSTKDI 397
Query: 84 RVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGE 143
+N ++ A+A D + + L +L + I + +T L+K C +
Sbjct: 398 ISWNAILDAFA-----DSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVK 452
Query: 144 IVHAQVVKFGFLSDVFN---GNSLINLYMTCGLLSNARKLFDEIPVT-DVVTWNSMVIGY 199
VH VK G L D GN+L++ Y CG + A K+F + +V++NS++ GY
Sbjct: 453 EVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGY 512
Query: 200 LRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIA 259
+ +G D+A LF +M+ ++ +W+ ++ + EA+ +F E+Q ++P+ +TI
Sbjct: 513 VNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIM 572
Query: 260 SVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK 319
++L CAQL ++ + H Y+ R G+ D+ + L+++Y KCG ++ A+ +F+ +
Sbjct: 573 NLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARR 631
Query: 320 DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCF 379
D +TAM++ +A+HG G +A + M + +KP+HV +L+AC H+GL++ G +
Sbjct: 632 DLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIY 691
Query: 380 DVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGN 439
D ++ V+ ++P + YAC VDL++R D++ + MP+EP+ +WG LL C +
Sbjct: 692 DSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNR 751
Query: 440 VELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMI 499
++LG VA HL+ E + ++ + ++Y +++ +RNL+K++ + KK GCS +
Sbjct: 752 MDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEM-KKPAGCSWL 810
Query: 500 EINGVVQEFSAGGSSELPMKDLVLIL 525
E++G F +G S P +D + L
Sbjct: 811 EVDGQRNVFVSGDCSH-PRRDSIFDL 835
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 167/366 (45%), Gaps = 47/366 (12%)
Query: 74 VFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGC 133
+F +++ D V+NI++ + G + F +AM D P+ +TF ++ C
Sbjct: 78 MFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAM-----HFADEPKPSSVTFAIVLPLC 132
Query: 134 TRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWN 193
R D +G+ +H+ ++K G D GN+L+++Y G +
Sbjct: 133 VRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFI------------------- 173
Query: 194 SMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKP 253
+A F + K+++SWN+II G + + +A F M + +P
Sbjct: 174 -----------FPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEP 222
Query: 254 DKITIASVLSACAQLG---AIDHGKWVHSYL-RRNGIECDVVIGTALVNMYGKCGLVQQA 309
+ TIA+VL CA + A G+ +HSY+ +R+ ++ V + +LV+ Y + G +++A
Sbjct: 223 NYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEA 282
Query: 310 FEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAG-VKPNHVTFVGLLSACAH 368
+F M KD +W +I+ +A + +KAF F + G V P+ VT + +L CA
Sbjct: 283 ASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQ 342
Query: 369 SGLVEQGRWCFD-VMKRVYLIEPQVYHYACMVDLLS-RARLFDESVIL-IRSMPMEPDVY 425
+ G+ +++ YL+E A L+S AR D S S+ D+
Sbjct: 343 LTDLASGKEIHSYILRHSYLLEDTSVGNA----LISFYARFGDTSAAYWAFSLMSTKDII 398
Query: 426 VWGALL 431
W A+L
Sbjct: 399 SWNAIL 404
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 140/324 (43%), Gaps = 38/324 (11%)
Query: 115 LCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLL 174
L G + F ++K C D SG +H V K G ++ S++N+Y C +
Sbjct: 13 LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRM 72
Query: 175 SNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGG 234
+ +K+F R+M+ + + WN ++TGL
Sbjct: 73 DDCQKMF-------------------------------RQMDSLDPVVWNIVLTGL-SVS 100
Query: 235 LAKEALELFHEMQ-QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIG 293
+E + F M KP +T A VL C +LG +GK +HSY+ + G+E D ++G
Sbjct: 101 CGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVG 160
Query: 294 TALVNMYGKCGLV-QQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGV 352
ALV+MY K G + A+ F+ + +KD +W A+I+ F+ + + AF F M +
Sbjct: 161 NALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPT 220
Query: 353 KPNHVTFVGLLSACAHSG---LVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFD 409
+PN+ T +L CA GR + + ++ V+ +V R +
Sbjct: 221 EPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIE 280
Query: 410 ESVILIRSMPMEPDVYVWGALLGG 433
E+ L M + D+ W ++ G
Sbjct: 281 EAASLFTRMGSK-DLVSWNVVIAG 303
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/494 (22%), Positives = 205/494 (41%), Gaps = 85/494 (17%)
Query: 8 ESKSLTLKNALSRLIEQCKNL--RELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKY 65
E T+ N L KN+ R ++IH+ ++ L Q H+ + +
Sbjct: 221 EPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWL----QTHVFVCNSLVSFYLRV 276
Query: 66 GSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDG-IFPNCL 124
G A ++F + + DL +N++I YA + + +A L+ ++ G + P+ +
Sbjct: 277 GRIEEAASLFTRMGSKDLVSWNVVIAGYAS-----NCEWFKAFQLFHNLVHKGDVSPDSV 331
Query: 125 TFPFLIKGCTRWMDGASGEIVHAQVVKFGF-LSDVFNGNSLINLYMTCGLLSNARKLFDE 183
T ++ C + D ASG+ +H+ +++ + L D GN+LI+ Y G S A F
Sbjct: 332 TIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSL 391
Query: 184 IPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELF 243
+ D+++WN++ LD F S + L EA+ L
Sbjct: 392 MSTKDIISWNAI-------------LDAFAD-------SPKQFQFLNLLHHLLNEAITL- 430
Query: 244 HEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGI---ECDVVIGTALVNMY 300
D +TI S+L C + I K VH Y + G+ E + +G AL++ Y
Sbjct: 431 ----------DSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAY 480
Query: 301 GKCGLVQQAFEI--------------------------------FEEMPEKDTSAWTAMI 328
KCG V+ A +I F EM D + W+ M+
Sbjct: 481 AKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMV 540
Query: 329 SVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLI 388
++A +A F E++ G++PN VT + LL CA + R C + R L
Sbjct: 541 RIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG 600
Query: 389 EPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVAL 448
+ ++ ++D+ ++ + + +S D+ ++ A++ G +HG + +
Sbjct: 601 DIRL--KGTLLDVYAKCGSLKHAYSVFQS-DARRDLVMFTAMVAGYAVHGRGKEALMIYS 657
Query: 449 HLID--LEPHNHAF 460
H+ + ++P +H F
Sbjct: 658 HMTESNIKP-DHVF 670
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 149/444 (33%), Positives = 218/444 (49%), Gaps = 41/444 (9%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ K G A VF + D+ + MI Y +D A+ L + M +G+ P
Sbjct: 263 YLKCGRMDEARFVFDRMERRDVITWTCMINGY-----TEDGDVENALELCRLMQFEGVRP 317
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
N +T L+ C + G+ +H V+ SD+ SLI++Y C +
Sbjct: 318 NAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRV------- 370
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
D +F + + W++II G VQ L +AL
Sbjct: 371 ------------------------DLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALG 406
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
LF M++ V+P+ T+ S+L A A L + +H YL + G + T LV++Y
Sbjct: 407 LFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYS 466
Query: 302 KCGLVQQAFEIF----EEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHV 357
KCG ++ A +IF E+ KD W A+IS + +HG G A F+EM R+GV PN +
Sbjct: 467 KCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEI 526
Query: 358 TFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRS 417
TF L+AC+HSGLVE+G F M Y + HY C+VDLL RA DE+ LI +
Sbjct: 527 TFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITT 586
Query: 418 MPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAA 477
+P EP VWGALL C H NV+LGE A L +LEP N Y+ L +IY GR+
Sbjct: 587 IPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDM 646
Query: 478 KRIRNLLKERRVQKKIPGCSMIEI 501
+++R++++ ++KK PG S IEI
Sbjct: 647 EKVRSMMENVGLRKK-PGHSTIEI 669
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 131/508 (25%), Positives = 219/508 (43%), Gaps = 74/508 (14%)
Query: 26 KNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRV 85
+++ + K +H ++T + H+++ L S +++ G TYA +F + L
Sbjct: 29 QSISKTKALHCHVITGGRVSG----HILSTL--SVTYALCGHITYARKLFEEMPQSSLLS 82
Query: 86 YNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGI--FPNCLTFPFLIKGCTRWMDGASGE 143
YNI+IR Y V + + A+ ++ +M+ +G+ P+ T+PF+ K G
Sbjct: 83 YNIVIRMY-----VREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGL 137
Query: 144 IVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNG 203
+VH ++++ F D + N+L+ +YM G + AR
Sbjct: 138 VVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMAR------------------------- 172
Query: 204 GLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLS 263
D+F M +++ISWN++I+G + G +AL +F M SV D TI S+L
Sbjct: 173 ------DVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLP 226
Query: 264 ACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSA 323
C L ++ G+ VH + + + + ALVNMY KCG + +A +F+ M +D
Sbjct: 227 VCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVIT 286
Query: 324 WTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGR----WCF 379
WT MI+ + G A + M+ GV+PN VT L+S C + V G+ W
Sbjct: 287 WTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWA- 345
Query: 380 DVMKRVY---LIEPQV---YHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGG 433
V ++VY +IE + Y VDL R + S + W A++ G
Sbjct: 346 -VRQQVYSDIIIETSLISMYAKCKRVDLCFR----------VFSGASKYHTGPWSAIIAG 394
Query: 434 CQMHGNVE--LGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQK 491
C + V LG + D+EP N A +L Y A I L +
Sbjct: 395 CVQNELVSDALGLFKRMRREDVEP-NIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMS 453
Query: 492 KIPGCSMIEINGVVQEFSAGGSSELPMK 519
+ + G+V +S G+ E K
Sbjct: 454 SLDAAT-----GLVHVYSKCGTLESAHK 476
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/514 (28%), Positives = 259/514 (50%), Gaps = 50/514 (9%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDR-HFCRAMVLYKKMLCDGIF 120
+ K G YA VF + D+ +N++I Y V+D + C+ M L K +
Sbjct: 319 YCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEK------LK 372
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
+C+T L+ R + G+ V ++ F SD+ ++++++Y CG + +A+K+
Sbjct: 373 YDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKV 432
Query: 181 FDEIPVTD-----------------------------------VVTWNSMVIGYLRNGGL 205
FD D V+TWN +++ LRNG +
Sbjct: 433 FDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQV 492
Query: 206 DNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASV 261
D A D+F +M N+ISW +++ G+VQ G ++EA+ +MQ+ ++P+ +I
Sbjct: 493 DEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVA 552
Query: 262 LSACAQLGAIDHGKWVHSYLRRNGIECDVV-IGTALVNMYGKCGLVQQAFEIFEEMPEKD 320
LSACA L ++ G+ +H Y+ RN +V I T+LV+MY KCG + +A ++F +
Sbjct: 553 LSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSE 612
Query: 321 TSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFD 380
AMIS +AL+G +A + +E G+KP+++T +LSAC H+G + Q F
Sbjct: 613 LPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFT 672
Query: 381 VMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNV 440
+ ++P + HY MVDLL+ A ++++ LI MP +PD + +L+ C
Sbjct: 673 DIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKT 732
Query: 441 ELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIE 500
EL + ++ L++ EP N Y+ + + Y G +D ++R ++K + ++KK PGCS I+
Sbjct: 733 ELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKK-PGCSWIQ 791
Query: 501 INGV--VQEFSAGGSSELPMKDLVLILDRLCNEM 532
I G V F A + + ++ ++L L +M
Sbjct: 792 ITGEEGVHVFVANDKTHTRINEIQMMLALLLYDM 825
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 205/421 (48%), Gaps = 57/421 (13%)
Query: 26 KNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRV 85
++L K+IH +IL + + ++ ++Y ++F ++K + A +F LRV
Sbjct: 84 RDLSTGKQIHARILKNGDFYARNEYIETKLVIF---YAKCDALEIAEVLF-----SKLRV 135
Query: 86 YNIMIRAYAGMDGVDDR-HFCR-AMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGE 143
N+ ++A + GV R C A++ + +ML + IFP+ P + K C G
Sbjct: 136 RNVF--SWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGR 193
Query: 144 IVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNG 203
VH VVK G VF +SL ++Y CG+L +A K+FDEIP + V WN++++GY++
Sbjct: 194 GVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQ-- 251
Query: 204 GLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLS 263
NGKN +EA+ LF +M++ V+P ++T+++ LS
Sbjct: 252 ------------NGKN-----------------EEAIRLFSDMRKQGVEPTRVTVSTCLS 282
Query: 264 ACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSA 323
A A +G ++ GK H+ NG+E D ++GT+L+N Y K GL++ A +F+ M EKD
Sbjct: 283 ASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVT 342
Query: 324 WTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGR----WCF 379
W +IS + GL A M +K + VT L+SA A + ++ G+ +C
Sbjct: 343 WNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCI 402
Query: 380 --DVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMH 437
+ L + YA ++ ++FD +V E D+ +W LL
Sbjct: 403 RHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTV--------EKDLILWNTLLAAYAES 454
Query: 438 G 438
G
Sbjct: 455 G 455
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 197/424 (46%), Gaps = 42/424 (9%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ K G A+ VF I + + +N ++ Y +G ++ A+ L+ M G+ P
Sbjct: 218 YGKCGVLDDASKVFDEIPDRNAVAWNALMVGYV-QNGKNEE----AIRLFSDMRKQGVEP 272
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+T + G+ HA + G D G SL+N Y GL+ A +F
Sbjct: 273 TRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVF 332
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
D +M K++++WN II+G VQ GL ++A+
Sbjct: 333 D-------------------------------RMFEKDVVTWNLIISGYVQQGLVEDAIY 361
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
+ M+ +K D +T+A+++SA A+ + GK V Y R+ E D+V+ + +++MY
Sbjct: 362 MCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYA 421
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KCG + A ++F+ EKD W +++ +A GL +A F M+ GV PN +T+
Sbjct: 422 KCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNL 481
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP-- 419
++ + +G V++ + F M+ +I P + + M++ + + +E+++ +R M
Sbjct: 482 IILSLLRNGQVDEAKDMFLQMQSSGII-PNLISWTTMMNGMVQNGCSEEAILFLRKMQES 540
Query: 420 -MEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNH--AFYMNLCDIYGKAGRFDA 476
+ P+ + L C ++ +G + ++I H+ + +L D+Y K G +
Sbjct: 541 GLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINK 600
Query: 477 AKRI 480
A+++
Sbjct: 601 AEKV 604
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 183/398 (45%), Gaps = 73/398 (18%)
Query: 129 LIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTD 188
+++GC D ++G+ +HA+++K G D + N I
Sbjct: 76 ILQGCVYERDLSTGKQIHARILKNG---DFYARNEYIE---------------------- 110
Query: 189 VVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQ 248
+VI Y + L+ A LF K+ +N+ SW +II + GL + AL F EM +
Sbjct: 111 ----TKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLE 166
Query: 249 ISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQ 308
+ PD + +V AC L G+ VH Y+ ++G+E V + ++L +MYGKCG++
Sbjct: 167 NEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDD 226
Query: 309 AFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAH 368
A ++F+E+P+++ AW A++ + +G +A F +M + GV+P VT LSA A+
Sbjct: 227 ASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASAN 286
Query: 369 SGLVEQGRWCFDV-----MKRVYLIEPQVYHYACMVDLLSRA-----RLFDESVI----- 413
G VE+G+ + M+ ++ + ++ C V L+ A R+F++ V+
Sbjct: 287 MGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLI 346
Query: 414 ------------------LIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEP 455
L+R ++ D L+ N++LG++V + I
Sbjct: 347 ISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCI---- 402
Query: 456 HNHAFYMNLC------DIYGKAGRFDAAKRIRNLLKER 487
H+F ++ D+Y K G AK++ + E+
Sbjct: 403 -RHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK 439
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 4/217 (1%)
Query: 227 ITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNG- 285
++ L + G KEAL L EM +++ +L C + GK +H+ + +NG
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 286 -IECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCF 344
+ I T LV Y KC ++ A +F ++ ++ +W A+I V GL A F
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGF 161
Query: 345 LEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSR 404
+EM + P++ + AC GR + + L E V+ + + D+ +
Sbjct: 162 VEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGL-EDCVFVASSLADMYGK 220
Query: 405 ARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVE 441
+ D++ + +P + + W AL+ G +G E
Sbjct: 221 CGVLDDASKVFDEIP-DRNAVAWNALMVGYVQNGKNE 256
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/469 (29%), Positives = 250/469 (53%), Gaps = 40/469 (8%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+++ G + V ++++ ++ +N +I YA V +A+ L+++M+ I P
Sbjct: 349 YAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMV-----IQALGLFRQMVTQRIKP 403
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ T I C G+ +H V++ +SD F NSLI++Y
Sbjct: 404 DAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFVQNSLIDMYS------------ 450
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
++G +D+A +F ++ +++++WNS++ G Q G + EA+
Sbjct: 451 -------------------KSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAIS 491
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
LF M ++ +++T +V+ AC+ +G+++ GKWVH L +G++ D+ TAL++MY
Sbjct: 492 LFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYA 550
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KCG + A +F M + +W++MI+ + +HG A F +M +G KPN V F+
Sbjct: 551 KCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMN 610
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME 421
+LSAC HSG VE+G++ F++MK + + P H+AC +DLLSR+ E+ I+ MP
Sbjct: 611 VLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFL 669
Query: 422 PDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIR 481
D VWG+L+ GC++H +++ + + L D+ + +Y L +IY + G ++ +R+R
Sbjct: 670 ADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLR 729
Query: 482 NLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCN 530
+ +K + KK+PG S IEI+ V F AG + + ++ L L N
Sbjct: 730 SAMKSSNL-KKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQN 777
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/531 (23%), Positives = 239/531 (45%), Gaps = 88/531 (16%)
Query: 21 LIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINN 80
L C +LR + ++H +L + L +T+L+ S +F GS + VF
Sbjct: 7 LFRSCSSLRLVSQLHAHLLVTGRLRRDPL--PVTKLIESYAF--MGSPDSSRLVFEAFPY 62
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGA 140
PD +Y ++I+ +D A+ LY +++ + + FP +++ C +
Sbjct: 63 PDSFMYGVLIKCNVWCHLLD-----AAIDLYHRLVSETTQISKFVFPSVLRACAGSREHL 117
Query: 141 S-GEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGY 199
S G VH +++K G D+ D V S++ Y
Sbjct: 118 SVGGKVHGRIIKGGV---------------------------DD----DAVIETSLLCMY 146
Query: 200 LRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIA 259
+ G L +A +F M +++++W+++++ ++ G +AL +F M V+PD +T+
Sbjct: 147 GQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMI 206
Query: 260 SVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK 319
SV+ CA+LG + + VH + R + D + +L+ MY KCG + + IFE++ +K
Sbjct: 207 SVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKK 266
Query: 320 DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRW-- 377
+ +WTAMIS + KA F EM ++G++PN VT +LS+C GL+ +G+
Sbjct: 267 NAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVH 326
Query: 378 -------------------------------CFDVMKRVYLIEPQVYHYACMVDLLSRAR 406
C V++ V + + + ++ L +
Sbjct: 327 GFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVS--DRNIVAWNSLISLYAHRG 384
Query: 407 LFDESVILIRSM---PMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMN 463
+ +++ L R M ++PD + + + C+ G V LG+++ H+I + + +
Sbjct: 385 MVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNS 444
Query: 464 LCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSS 514
L D+Y K+G D+A + N +K R S++ N ++ FS G+S
Sbjct: 445 LIDMYSKSGSVDSASTVFNQIKHR---------SVVTWNSMLCGFSQNGNS 486
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 191/402 (47%), Gaps = 48/402 (11%)
Query: 60 CSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGI 119
C + + G+ + A VF + DL ++ ++ + +++ +A+ ++K M+ DG+
Sbjct: 144 CMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSC-----LENGEVVKALRMFKCMVDDGV 198
Query: 120 FPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCG-LLSNAR 178
P+ +T +++GC VH Q+ + F D NSL+ +Y CG LLS+ R
Sbjct: 199 EPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSER 258
Query: 179 KLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKE 238
+F K+ KN +SW ++I+ +G +++
Sbjct: 259 --------------------------------IFEKIAKKNAVSWTAMISSYNRGEFSEK 286
Query: 239 ALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDV-VIGTALV 297
AL F EM + ++P+ +T+ SVLS+C +G I GK VH + R ++ + + ALV
Sbjct: 287 ALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALV 346
Query: 298 NMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHV 357
+Y +CG + + + +++ AW ++IS++A G+ +A F +M +KP+
Sbjct: 347 ELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAF 406
Query: 358 TFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRS 417
T +SAC ++GLV G+ + R + + V + ++D+ S++ D + +
Sbjct: 407 TLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQN--SLIDMYSKSGSVDSASTVFNQ 464
Query: 418 MPMEPDVYVWGALLGGCQMHGN-VELGEKVALHLIDLEPHNH 458
+ V W ++L G +GN VE A+ L D H++
Sbjct: 465 IKHRS-VVTWNSMLCGFSQNGNSVE-----AISLFDYMYHSY 500
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 148/521 (28%), Positives = 267/521 (51%), Gaps = 20/521 (3%)
Query: 18 LSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHM 77
L ++ Q + L E K++H I TS + ++ + R+ ++K GS A VF
Sbjct: 91 LIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRM-----YAKCGSLVDARKVFDE 145
Query: 78 INNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWM 137
+ N DL +N+M+ YA + +++ +K+ + + ++ ++ G +
Sbjct: 146 MPNRDLCSWNVMVNGYAEVGLLEE---------ARKLFDEMTEKDSYSWTAMVTGYVKKD 196
Query: 138 DGASGEIVHAQVVKF-GFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPV----TDVVTW 192
++++ + + ++F + + + +++ I +D V W
Sbjct: 197 QPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLW 256
Query: 193 NSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVK 252
+S++ Y + G +D A ++F K+ K+++SW S+I + +E LF E+ +
Sbjct: 257 SSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCER 316
Query: 253 PDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEI 312
P++ T A VL+ACA L + GK VH Y+ R G + ++LV+MY KCG ++ A +
Sbjct: 317 PNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHV 376
Query: 313 FEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLV 372
+ P+ D +WT++I A +G +A F + ++G KP+HVTFV +LSAC H+GLV
Sbjct: 377 VDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLV 436
Query: 373 EQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLG 432
E+G F + + + HY C+VDLL+R+ F++ +I MPM+P ++W ++LG
Sbjct: 437 EKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLG 496
Query: 433 GCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKK 492
GC +GN++L E+ A L +EP N Y+ + +IY AG+++ ++R ++E V K+
Sbjct: 497 GCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKR 556
Query: 493 IPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
PG S EI F A +S +V L L +MK
Sbjct: 557 -PGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMK 596
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 194/358 (54%), Gaps = 12/358 (3%)
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
P T+ LI+ C++ G+ VH + GF+ + N L+ +Y CG L +ARK+
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
FDE+P D+ +WN MV GY G L+ A LF +M K+ SW +++TG V+ +EAL
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 241 ELFHEMQQI-SVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNM 299
L+ MQ++ + +P+ T++ ++A A + I GK +H ++ R G++ D V+ ++L++M
Sbjct: 203 VLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDM 262
Query: 300 YGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
YGKCG + +A IF+++ EKD +WT+MI + + F F E+ + +PN TF
Sbjct: 263 YGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTF 322
Query: 360 VGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP 419
G+L+ACA E G+ M RV +P + + +VD+ ++ + + ++ P
Sbjct: 323 AGVLNACADLTTEELGKQVHGYMTRVGF-DPYSFASSSLVDMYTKCGNIESAKHVVDGCP 381
Query: 420 MEPDVYVWGALLGGCQMHGNVELGEKVALHLIDL-----EPHNHAFYMNLCDIYGKAG 472
+PD+ W +L+GGC +G + AL DL +H ++N+ AG
Sbjct: 382 -KPDLVSWTSLIGGCAQNGQPD----EALKYFDLLLKSGTKPDHVTFVNVLSACTHAG 434
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 119/271 (43%), Gaps = 52/271 (19%)
Query: 235 LAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGT 294
L +EA++L + KP T +++ C+Q A++ GK VH ++R +G +VI
Sbjct: 69 LLREAVQLLGRAK----KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWN 124
Query: 295 ALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKP 354
L+ MY KCG + A ++F+EMP +D +W M++ +
Sbjct: 125 RLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGY----------------------- 161
Query: 355 NHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVI- 413
A GL+E+ R FD M E Y + MV + +E+++
Sbjct: 162 ------------AEVGLLEEARKLFDEM-----TEKDSYSWTAMVTGYVKKDQPEEALVL 204
Query: 414 --LIRSMP-MEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLE-PHNHAFYMNLCDIYG 469
L++ +P P+++ + + G+++ H++ + + +L D+YG
Sbjct: 205 YSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYG 264
Query: 470 KAGRFDAAKRIRNLLKERRVQKKIPGCSMIE 500
K G D A+ I + + E+ V + SMI+
Sbjct: 265 KCGCIDEARNIFDKIVEKDV---VSWTSMID 292
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 139/457 (30%), Positives = 230/457 (50%), Gaps = 43/457 (9%)
Query: 57 LFSCS-----FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLY 111
+F CS + K G A +F + D+ + M+ +A +A+ Y
Sbjct: 151 VFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAG-----KSLKAVEFY 205
Query: 112 KKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTC 171
++M +G + + L++ D G VH + + G +V SL+++Y
Sbjct: 206 REMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKV 265
Query: 172 GLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLV 231
G + A ++ F +M K +SW S+I+G
Sbjct: 266 GFIEVASRV-------------------------------FSRMMFKTAVSWGSLISGFA 294
Query: 232 QGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVV 291
Q GLA +A E EMQ + +PD +T+ VL AC+Q+G++ G+ VH Y+ + + D V
Sbjct: 295 QNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRV 353
Query: 292 IGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAG 351
TAL++MY KCG + + EIFE + KD W MIS + +HG G + FL+M +
Sbjct: 354 TATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESN 413
Query: 352 VKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDES 411
++P+H TF LLSA +HSGLVEQG+ F VM Y I+P HY C++DLL+RA +E+
Sbjct: 414 IEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEA 473
Query: 412 VILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKA 471
+ +I S ++ + +W ALL GC H N+ +G+ A ++ L P + + + + A
Sbjct: 474 LDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATA 533
Query: 472 GRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEF 508
++ ++R L++ ++ K+PG S IE+NG ++ F
Sbjct: 534 NKWKEVAKVRKLMRNGAME-KVPGYSAIEVNGELRTF 569
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 139/451 (30%), Positives = 223/451 (49%), Gaps = 56/451 (12%)
Query: 29 RELKRIHTQILTSPNLHSSDQYHLITR-LLFSCSFSKYGSFTYATNVFHMINNPDLRVYN 87
R + +IH ++++ NL + I+R L+ SC + G +YA VF + + VYN
Sbjct: 31 RHITQIHAFVISTGNLLNGSS---ISRDLIASCG--RIGEISYARKVFDELPQRGVSVYN 85
Query: 88 IMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHA 147
MI Y+ D+ + LY +M+ + I P+ TF IK C + GE V
Sbjct: 86 SMIVVYSRGKNPDE-----VLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWC 140
Query: 148 QVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDN 207
+ V FG+ +DVF +S++NLYM CG +D
Sbjct: 141 KAVDFGYKNDVFVCSSVLNLYMKCG-------------------------------KMDE 169
Query: 208 ALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQ 267
A LF KM +++I W +++TG Q G + +A+E + EMQ D++ + +L A
Sbjct: 170 AEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGD 229
Query: 268 LGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAM 327
LG G+ VH YL R G+ +VV+ T+LV+MY K G ++ A +F M K +W ++
Sbjct: 230 LGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSL 289
Query: 328 ISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRW--CFDVMKRV 385
IS FA +GL KAF+ +EM+ G +P+ VT VG+L AC+ G ++ GR C+ ++KR
Sbjct: 290 ISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCY-ILKRH 348
Query: 386 YLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEK 445
L +V A M D+ S+ S + + D+ W ++ +HGN + E
Sbjct: 349 VL--DRVTATALM-DMYSKCGALSSSREIFEHVG-RKDLVCWNTMISCYGIHGNGQ--EV 402
Query: 446 VALHL----IDLEPHNHAFYMNLCDIYGKAG 472
V+L L ++EP +HA + +L +G
Sbjct: 403 VSLFLKMTESNIEP-DHATFASLLSALSHSG 432
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 238 bits (607), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 137/430 (31%), Positives = 227/430 (52%), Gaps = 37/430 (8%)
Query: 79 NNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMD 138
+N DL +N M+ AG D H + + L+ M G + T + K C
Sbjct: 478 HNFDLVAWNAMM---AGYTQSHDGH--KTLKLFALMHKQGERSDDFTLATVFKTCGFLFA 532
Query: 139 GASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIG 198
G+ VHA +K G+ D++ + ++++Y+ CG +S A+ FD IPV D V
Sbjct: 533 INQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV-------- 584
Query: 199 YLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITI 258
+W ++I+G ++ G + A +F +M+ + V PD+ TI
Sbjct: 585 -----------------------AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTI 621
Query: 259 ASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPE 318
A++ A + L A++ G+ +H+ + D +GT+LV+MY KCG + A+ +F+ +
Sbjct: 622 ATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM 681
Query: 319 KDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWC 378
+ +AW AM+ A HG G + F +M+ G+KP+ VTF+G+LSAC+HSGLV +
Sbjct: 682 MNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKH 741
Query: 379 FDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHG 438
M Y I+P++ HY+C+ D L RA L ++ LI SM ME ++ LL C++ G
Sbjct: 742 MRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQG 801
Query: 439 NVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSM 498
+ E G++VA L++LEP + + Y+ L ++Y A ++D K R ++K +V KK PG S
Sbjct: 802 DTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKV-KKDPGFSW 860
Query: 499 IEINGVVQEF 508
IE+ + F
Sbjct: 861 IEVKNKIHIF 870
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 201/446 (45%), Gaps = 57/446 (12%)
Query: 32 KRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIR 91
K H +ILT + + LI L+ +SK GS TYA VF + + DL +N ++
Sbjct: 59 KCTHARILT---FEENPERFLINNLI--SMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113
Query: 92 AYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVK 151
AYA + +A +L++ + D ++ + +T ++K C + E H K
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173
Query: 152 FGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALD- 210
G D F +L+N+Y+ G + + LF+E+P DVV WN M+ YL G + A+D
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 211 -----------------LFRKMNGKN--------------------IISWNSIITGLVQG 233
L +++G + II N ++ +
Sbjct: 234 SSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHS 293
Query: 234 GLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIG 293
G L+ F +M + V+ D++T +L+ ++ ++ G+ VH + G++ + +
Sbjct: 294 GQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVS 353
Query: 294 TALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVK 353
+L+NMY K A +F+ M E+D +W ++I+ A +GL +A F+++ R G+K
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 354 PNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYA------CMVDLLSRARL 407
P+ T +L A S L E + K+V++ ++ + + ++D SR R
Sbjct: 414 PDQYTMTSVLKAA--SSLPEG----LSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRC 467
Query: 408 FDESVILIRSMPMEPDVYVWGALLGG 433
E+ IL D+ W A++ G
Sbjct: 468 MKEAEILFERHNF--DLVAWNAMMAG 491
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 26/218 (11%)
Query: 142 GEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLR 201
G+ HA+++ F + F N+LI++Y CG L+ AR++FD++P D+V+WNS++ Y +
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 202 NGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASV 261
S ++ + Q L LF ++Q V ++T++ +
Sbjct: 118 --------------------SSECVVENIQQAFL------LFRILRQDVVYTSRMTLSPM 151
Query: 262 LSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDT 321
L C G + + H Y + G++ D + ALVN+Y K G V++ +FEEMP +D
Sbjct: 152 LKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDV 211
Query: 322 SAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
W M+ + G +A D +G+ PN +T
Sbjct: 212 VLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 145/339 (42%), Gaps = 42/339 (12%)
Query: 105 CRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSL 164
C A ++ + CD + TF ++ + A G+ VH +K G + NSL
Sbjct: 302 CFADMVESDVECDQV-----TFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSL 356
Query: 165 INLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWN 224
IN+Y AR +FD M+ +++ISWN
Sbjct: 357 INMYCKLRKFGFARTVFD-------------------------------NMSERDLISWN 385
Query: 225 SIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLG-AIDHGKWVHSYLRR 283
S+I G+ Q GL EA+ LF ++ + +KPD+ T+ SVL A + L + K VH + +
Sbjct: 386 SVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIK 445
Query: 284 NGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDC 343
D + TAL++ Y + +++A EI E D AW AM++ + G K
Sbjct: 446 INNVSDSFVSTALIDAYSRNRCMKEA-EILFERHNFDLVAWNAMMAGYTQSHDGHKTLKL 504
Query: 344 FLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFD-VMKRVYLIEPQVYHYACMVDLL 402
F M + G + + T + C + QG+ +K Y ++ ++ + ++D+
Sbjct: 505 FALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD--LWVSSGILDMY 562
Query: 403 SRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVE 441
+ + S+P+ PD W ++ GC +G E
Sbjct: 563 VKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIENGEEE 600
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 238 bits (607), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 139/442 (31%), Positives = 227/442 (51%), Gaps = 39/442 (8%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGI-F 120
++K YA VF + + ++ MI Y + + + V ++ ++ D +
Sbjct: 250 YAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEA----GEVFFQMLVNDNVAM 305
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
+ ++ GC R+ D + G VH VK GF+ D+ N++I+ Y
Sbjct: 306 VTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYA----------- 354
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
+ G L +A F ++ K++IS+NS+ITG V +E+
Sbjct: 355 --------------------KYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESF 394
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
LFHEM+ ++PD T+ VL+AC+ L A+ HG H Y +G + I AL++MY
Sbjct: 395 RLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMY 454
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
KCG + A +F+ M ++D +W M+ F +HGLG +A F M+ GV P+ VT +
Sbjct: 455 TKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLL 514
Query: 361 GLLSACAHSGLVEQGRWCFDVMKR-VYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP 419
+LSAC+HSGLV++G+ F+ M R + + P++ HY CM DLL+RA DE+ + MP
Sbjct: 515 AILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMP 574
Query: 420 MEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKR 479
EPD+ V G LL C + N ELG +V+ + L + + L + Y A R++ A R
Sbjct: 575 FEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTESLVL-LSNTYSAAERWEDAAR 633
Query: 480 IRNLLKERRVQKKIPGCSMIEI 501
IR +++++R K PG S +++
Sbjct: 634 IR-MIQKKRGLLKTPGYSWVDV 654
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 138/517 (26%), Positives = 225/517 (43%), Gaps = 94/517 (18%)
Query: 21 LIEQCKNLREL---KRIHTQILT-SPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFH 76
L+E C R L + IH +L S L SS +TRL SC+ A +VF
Sbjct: 5 LLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCN-----EVELARHVFD 59
Query: 77 MINNPDLR--VYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCT 134
I +P + +++MIRAYA D + +A+ LY KML G+ P T+PF++K C
Sbjct: 60 EIPHPRINPIAWDLMIRAYASNDFAE-----KALDLYYKMLNSGVRPTKYTYPFVLKACA 114
Query: 135 RWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNS 194
G+++H+ V F +D++ +L++ Y CG L A K+FDE+P D+V WN+
Sbjct: 115 GLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNA 174
Query: 195 MVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPD 254
M+ G+ + L + + LF M I GL P+
Sbjct: 175 MISGFSLHCCLTDVIGLFLDMRR---------IDGL---------------------SPN 204
Query: 255 KITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFE 314
TI + A + GA+ GK VH Y R G D+V+ T ++++Y K + A +F+
Sbjct: 205 LSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFD 264
Query: 315 EMPEKDTSAWTAMISVFALHGLGWKAFDCFLEM----ERAGVKPNHVTFVGLLSACAHSG 370
+K+ W+AMI + + + +A + F +M A V P + + L CA G
Sbjct: 265 LDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLI--LMGCARFG 322
Query: 371 LVEQGRW--CFDVMKRVYLIEPQVYH-----YACMVDLLSRARLFDE----------SVI 413
+ GR C+ V K ++++ V + YA L R F E S+I
Sbjct: 323 DLSGGRCVHCYAV-KAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLI 381
Query: 414 L-----------------IRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPH 456
+R+ + PD+ +L C + G + + H
Sbjct: 382 TGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCV---VH 438
Query: 457 NHAFYMNLC----DIYGKAGRFDAAKRIRNLLKERRV 489
+A ++C D+Y K G+ D AKR+ + + +R +
Sbjct: 439 GYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDI 475
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 148/316 (46%), Gaps = 45/316 (14%)
Query: 126 FPFLIKGCTRWMDGASGEIVHAQVVKFGF-LSDVFNGNSLINLYMTCGLLSNARKLFDEI 184
F L++ C R + G+++H ++K LS +L LY +C + AR +FDEI
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 185 PVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFH 244
P + N I+W+ +I A++AL+L++
Sbjct: 62 PHPRI-----------------------------NPIAWDLMIRAYASNDFAEKALDLYY 92
Query: 245 EMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCG 304
+M V+P K T VL ACA L AID GK +HS++ + D+ + TALV+ Y KCG
Sbjct: 93 KMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCG 152
Query: 305 LVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERA-GVKPNHVTFVGLL 363
++ A ++F+EMP++D AW AMIS F+LH FL+M R G+ PN T VG+
Sbjct: 153 ELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMF 212
Query: 364 SACAHSGLVEQGRWCFDVMKRVYLIEPQVYH------YACMVDLLSRARLFDESVILIRS 417
A +G + +G+ R+ V YA ++ R+FD
Sbjct: 213 PALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFD-------- 264
Query: 418 MPMEPDVYVWGALLGG 433
+ + + W A++GG
Sbjct: 265 LDFKKNEVTWSAMIGG 280
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 188/429 (43%), Gaps = 59/429 (13%)
Query: 21 LIEQCKNLREL---KRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHM 77
+++ C LR + K IH+ + S ++D Y + F ++K G A VF
Sbjct: 109 VLKACAGLRAIDDGKLIHSHVNCSD--FATDMYVCTALVDF---YAKCGELEMAIKVFDE 163
Query: 78 INNPDLRVYNIMIRAYAGMDGVDDRHFCRAMV--LYKKML-CDGIFPNCLTFPFLIKGCT 134
+ D+ +N MI ++ H C V L+ M DG+ PN T +
Sbjct: 164 MPKRDMVAWNAMISGFS-------LHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALG 216
Query: 135 RWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNS 194
R G+ VH + GF +D+ ++++Y + AR++FD
Sbjct: 217 RAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFD------------ 264
Query: 195 MVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEM----QQIS 250
LD KN ++W+++I G V+ + KEA E+F +M
Sbjct: 265 --------------LDF-----KKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAM 305
Query: 251 VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAF 310
V P + I +L CA+ G + G+ VH Y + G D+ + +++ Y K G + AF
Sbjct: 306 VTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAF 363
Query: 311 EIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSG 370
F E+ KD ++ ++I+ ++ ++F F EM +G++P+ T +G+L+AC+H
Sbjct: 364 RQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLA 423
Query: 371 LVEQGRWCFD-VMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGA 429
+ G C + Y + + + ++D+ ++ D + + +M + D+ W
Sbjct: 424 ALGHGSSCHGYCVVHGYAVNTSICN--ALMDMYTKCGKLDVAKRVFDTM-HKRDIVSWNT 480
Query: 430 LLGGCQMHG 438
+L G +HG
Sbjct: 481 MLFGFGIHG 489
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 23/234 (9%)
Query: 260 SVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNM---YGKCGLVQQAFEIFEEM 316
S+L C + + G+ +H +L + + + T LVN+ Y C V+ A +F+E+
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLT--LSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 317 PEKDTS--AWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQ 374
P + AW MI +A + KA D + +M +GV+P T+ +L ACA ++
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 375 GRW------CFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWG 428
G+ C D +Y+ V YA +L ++FDE MP + D+ W
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDE-------MP-KRDMVAWN 173
Query: 429 ALLGGCQMHGNVE--LGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
A++ G +H + +G + + ID N + + + G+AG K +
Sbjct: 174 AMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAV 227
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 160/571 (28%), Positives = 261/571 (45%), Gaps = 97/571 (16%)
Query: 21 LIEQCKNLREL---KRIHTQI---LTSPNLHSSDQYHLITRLLFSCSFSKY---GSFTYA 71
L E C+ LR L + +H ++ + +P++ LL +C Y S A
Sbjct: 89 LFEACRELRSLSHGRLLHDRMRMGIENPSV-----------LLQNCVLQMYCECRSLEDA 137
Query: 72 TNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIK 131
+F ++ + MI AYA +D +A+ L+ ML G P + L+K
Sbjct: 138 DKLFDEMSELNAVSRTTMISAYAEQGILD-----KAVGLFSGMLASGDKPPSSMYTTLLK 192
Query: 132 GCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP------ 185
G +HA V++ G S+ ++N+Y+ CG L A+++FD++
Sbjct: 193 SLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVA 252
Query: 186 ------------------------VTDVVTWNSMVIG----------------------- 198
VT+ V W+S V
Sbjct: 253 CTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVA 312
Query: 199 -----------------YLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
Y++ ++A F+++ N +SW++II+G Q +EA++
Sbjct: 313 KLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVK 372
Query: 242 LFHEMQQISVKP-DKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
F ++ + + T S+ AC+ L + G VH+ + + +AL+ MY
Sbjct: 373 TFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMY 432
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
KCG + A E+FE M D AWTA IS A +G +A F +M G+KPN VTF+
Sbjct: 433 SKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFI 492
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
+L+AC+H+GLVEQG+ C D M R Y + P + HY CM+D+ +R+ L DE++ +++MP
Sbjct: 493 AVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPF 552
Query: 421 EPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
EPD W L GC H N+ELGE L L+P + A Y+ ++Y AG+++ A +
Sbjct: 553 EPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEM 612
Query: 481 RNLLKERRVQKKIPGCSMIEINGVVQEFSAG 511
L+ ER ++K++ CS I+ G + F G
Sbjct: 613 MKLMNERMLKKEL-SCSWIQEKGKIHRFIVG 642
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%)
Query: 238 EALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALV 297
EA E EM + V + + AC +L ++ HG+ +H +R V++ ++
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125
Query: 298 NMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHV 357
MY +C ++ A ++F+EM E + + T MIS +A G+ KA F M +G KP
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSS 185
Query: 358 TFVGLLSACAHSGLVEQGR 376
+ LL + + ++ GR
Sbjct: 186 MYTTLLKSLVNPRALDFGR 204
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/465 (32%), Positives = 237/465 (50%), Gaps = 39/465 (8%)
Query: 71 ATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLI 130
A +F I +L +N I + + DG R A + ++++ DG PN +TF +
Sbjct: 162 ARKLFDEIPERNLETWNAFI-SNSVTDG-RPREAIEAFIEFRRI--DG-HPNSITFCAFL 216
Query: 131 KGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVV 190
C+ W+ G +H V++ GF +DV N LI+ Y C + ++ +F E
Sbjct: 217 NACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTE------- 269
Query: 191 TWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQIS 250
M KN +SW S++ VQ ++A L+ ++
Sbjct: 270 ------------------------MGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDI 305
Query: 251 VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAF 310
V+ I+SVLSACA + ++ G+ +H++ + +E + +G+ALV+MYGKCG ++ +
Sbjct: 306 VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSE 365
Query: 311 EIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGV--KPNHVTFVGLLSACAH 368
+ F+EMPEK+ ++I +A G A F EM G PN++TFV LLSAC+
Sbjct: 366 QAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR 425
Query: 369 SGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWG 428
+G VE G FD M+ Y IEP HY+C+VD+L RA + + + I+ MP++P + VWG
Sbjct: 426 AGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWG 485
Query: 429 ALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERR 488
AL C+MHG +LG A +L L+P + ++ L + + AGR+ A +R LK
Sbjct: 486 ALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVG 545
Query: 489 VQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
+ KK G S I + V F A S + K++ L +L NEM+
Sbjct: 546 I-KKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEME 589
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 207/473 (43%), Gaps = 64/473 (13%)
Query: 43 NLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVD-- 100
+L S+D L+ + S S + G +A V + + P + N +I Y+ +D +
Sbjct: 2 SLLSADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESA 61
Query: 101 ------------------------DRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRW 136
+ HF A+V + +M +G+ PN TFP K
Sbjct: 62 RLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASL 121
Query: 137 MDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMV 196
+G+ +HA VK G + DVF G S ++Y L +ARKLFDEIP
Sbjct: 122 RLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP----------- 170
Query: 197 IGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKI 256
+N+ +WN+ I+ V G +EA+E F E ++I P+ I
Sbjct: 171 --------------------ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSI 210
Query: 257 TIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEM 316
T + L+AC+ ++ G +H + R+G + DV + L++ YGKC ++ + IF EM
Sbjct: 211 TFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM 270
Query: 317 PEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGR 376
K+ +W ++++ + + KA +L + V+ + +LSACA +E GR
Sbjct: 271 GTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGR 330
Query: 377 WCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQM 436
+E ++ + +VD+ + ++S MP E ++ +L+GG
Sbjct: 331 -SIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYAH 388
Query: 437 HGNVELG----EKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLK 485
G V++ E++A P N+ +++L +AG + +I + ++
Sbjct: 389 QGQVDMALALFEEMAPRGCGPTP-NYMTFVSLLSACSRAGAVENGMKIFDSMR 440
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/470 (31%), Positives = 234/470 (49%), Gaps = 42/470 (8%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+SK S A +F + + ++ M+ Y+ + A+ L+ +M GI P
Sbjct: 266 YSKCESLNEACKMFDSSGDRNSITWSAMVTGYS-----QNGESLEAVKLFSRMFSAGIKP 320
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ T ++ C+ G+ +H+ ++K GF +F +L+++Y G L++ARK F
Sbjct: 321 SEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGF 380
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
D + DV W S+I+G VQ +EAL
Sbjct: 381 DCLQERDVAL-------------------------------WTSLISGYVQNSDNEEALI 409
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
L+ M+ + P+ T+ASVL AC+ L ++ GK VH + ++G +V IG+AL MY
Sbjct: 410 LYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYS 469
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KCG ++ +F P KD +W AMIS + +G G +A + F EM G++P+ VTFV
Sbjct: 470 KCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVN 529
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME 421
++SAC+H G VE+G + F++M ++P+V HYACMVDLLSRA E+ I S ++
Sbjct: 530 IISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANID 589
Query: 422 PDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIR 481
+ +W LL C+ HG ELG L+ L + Y+ L IY GR +R+
Sbjct: 590 HGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVW 649
Query: 482 NLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPM----KDLVLILDR 527
++ V K++ GCS IE+ F G + PM KDLV ++ R
Sbjct: 650 KHMRANGVSKEV-GCSWIELKNQYHVFVVGDTMH-PMIEETKDLVCLVSR 697
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 122/536 (22%), Positives = 225/536 (41%), Gaps = 91/536 (16%)
Query: 24 QCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDL 83
Q +NL + +H QI+ + +++ ++K G A ++F+ I D+
Sbjct: 26 QQRNLVAGRAVHGQIIRTGASTCIQHANVLVNF-----YAKCGKLAKAHSIFNAIICKDV 80
Query: 84 RVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGE 143
+N +I Y+ G+ + M L+++M I PN T + K + G
Sbjct: 81 VSWNSLITGYSQNGGISSSY--TVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGR 138
Query: 144 IVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNG 203
HA VVK D++ SL+ +Y GL+ + K+F +P + TW++MV GY G
Sbjct: 139 QAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRG 198
Query: 204 GLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLS 263
++ A+ +F LF ++ D + A VLS
Sbjct: 199 RVEEAIKVFN----------------------------LFLREKEEGSDSDYVFTA-VLS 229
Query: 264 ACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSA 323
+ A + G+ +H +NG+ V + ALV MY KC + +A ++F+ ++++
Sbjct: 230 SLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSIT 289
Query: 324 WTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMK 383
W+AM++ ++ +G +A F M AG+KP+ T VG+L+AC+ +E+G+ +
Sbjct: 290 WSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLL 349
Query: 384 RVYLIEPQVYHYACMVDLLSRA-------RLFD------------------------ESV 412
++ E ++ +VD+ ++A + FD E++
Sbjct: 350 KLGF-ERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEAL 408
Query: 413 ILIRSMPME---PDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMN------ 463
IL R M P+ ++L C +ELG++V H I H F +
Sbjct: 409 ILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTI-----KHGFGLEVPIGSA 463
Query: 464 LCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMK 519
L +Y K G + NL V ++ P ++ N ++ S G + ++
Sbjct: 464 LSTMYSKCGSLEDG----NL-----VFRRTPNKDVVSWNAMISGLSHNGQGDEALE 510
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 5/202 (2%)
Query: 248 QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQ 307
Q + P T+ L+ +Q + G+ VH + R G + LVN Y KCG +
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 308 QAFEIFEEMPEKDTSAWTAMISVFALHG---LGWKAFDCFLEMERAGVKPNHVTFVGLLS 364
+A IF + KD +W ++I+ ++ +G + F EM + PN T G+
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 365 ACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDV 424
A + GR ++ ++ +Y +V + +A L ++ + + MP E +
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSF-GDIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERNT 184
Query: 425 YVWGALLGGCQMHGNVELGEKV 446
Y W ++ G G VE KV
Sbjct: 185 YTWSTMVSGYATRGRVEEAIKV 206
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 142/440 (32%), Positives = 225/440 (51%), Gaps = 49/440 (11%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
++K G F+ A F + D +N + + Y + + +A +YK M G+ P
Sbjct: 446 YAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDAN-----KAFDVYKNMKLHGVCP 500
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ T +++ C D A G V+ Q++K GF S+ ++LIN++ C L+ A LF
Sbjct: 501 DSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLF 560
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
D+ G + K+ +SWN ++ G + G A+EA+
Sbjct: 561 DKC-------------------GFE-----------KSTVSWNIMMNGYLLHGQAEEAVA 590
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
F +M+ +P+ +T +++ A A+L A+ G VHS L + G +G +LV+MY
Sbjct: 591 TFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYA 650
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KCG+++ + + F E+ K +W M+S +A HGL A FL M+ +KP+ V+F+
Sbjct: 651 KCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLS 710
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME 421
+LSAC H+GLVE+G+ F+ M + IE +V HYACMVDLL +A LF E+V ++R M ++
Sbjct: 711 VLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVK 770
Query: 422 PDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIR 481
V VWGALL +MH N+ L L+ LEP N + Y + G + RI
Sbjct: 771 TSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHYSQ----DRRLGEVNNVSRI- 825
Query: 482 NLLKERRVQKKIPGCSMIEI 501
KK+P CS IE+
Sbjct: 826 ---------KKVPACSWIEV 836
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 131/257 (50%), Gaps = 3/257 (1%)
Query: 186 VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHE 245
+ DV S++ Y + G L+ A LF + ++++SW+++I Q G EA+ LF +
Sbjct: 332 IGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRD 391
Query: 246 MQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGL 305
M +I +KP+ +T+ SVL CA + A GK +H Y + IE ++ TA+++MY KCG
Sbjct: 392 MMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGR 451
Query: 306 VQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSA 365
A + FE +P KD A+ A+ + G KAFD + M+ GV P+ T VG+L
Sbjct: 452 FSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQT 511
Query: 366 CAHSGLVEQGRWCF-DVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDV 424
CA +G + ++K + E V H ++++ ++ +++L E
Sbjct: 512 CAFCSDYARGSCVYGQIIKHGFDSECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKST 569
Query: 425 YVWGALLGGCQMHGNVE 441
W ++ G +HG E
Sbjct: 570 VSWNIMMNGYLLHGQAE 586
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 206/472 (43%), Gaps = 83/472 (17%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+SK G A +F I + D+ ++ MI +Y D+ A+ L++ M+ I P
Sbjct: 345 YSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDE-----AISLFRDMMRIHIKP 399
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
N +T +++GC G+ +H +K S++ ++I++Y CG S A K F
Sbjct: 400 NAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAF 459
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
+ +P+ D V +N++ GY + G + A D+++ M
Sbjct: 460 ERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMK------------------------- 494
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
H V PD T+ +L CA G V+ + ++G + + + AL+NM+
Sbjct: 495 -LH-----GVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFT 548
Query: 302 KCGLVQQAFEIFEEMP-EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
KC + A +F++ EK T +W M++ + LHG +A F +M+ +PN VTFV
Sbjct: 549 KCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFV 608
Query: 361 GLLSACA-----------HSGLVEQGRWC---------FDVMKRVYLIEPQ--------- 391
++ A A HS L++ G +C D+ + +IE
Sbjct: 609 NIVRAAAELSALRVGMSVHSSLIQCG-FCSQTPVGNSLVDMYAKCGMIESSEKCFIEISN 667
Query: 392 --VYHYACMVDLLSRARLFDESVILIRSM---PMEPDVYVWGALLGGCQMHGNVELGEKV 446
+ + M+ + L +V L SM ++PD + ++L C+ G VE G+++
Sbjct: 668 KYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRI 727
Query: 447 -----ALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKI 493
H I+ E ++A + D+ GKAG F A +++ RV+ +
Sbjct: 728 FEEMGERHKIEAEVEHYAC---MVDLLGKAGLFGEAVE---MMRRMRVKTSV 773
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 126/535 (23%), Positives = 233/535 (43%), Gaps = 103/535 (19%)
Query: 21 LIEQCKNLRELKRIHTQILTS---PNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHM 77
++ +CKN R L ++H ++ S P+ + Y L R S +F
Sbjct: 11 MLRECKNFRCLLQVHGSLIVSGLKPHNQLINAYSLFQRQDLS------------RVIFDS 58
Query: 78 INNPDLRVYNIMIRAY--AGMDGVDDRHFCRAMVLYKKMLCD-GIFPNCLTFPFLIKGCT 134
+ +P + ++N MIR Y AG+ A+ + M + GI P+ +F F +K C
Sbjct: 59 VRDPGVVLWNSMIRGYTRAGLHR-------EALGFFGYMSEEKGIDPDKYSFTFALKACA 111
Query: 135 RWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNS 194
MD G +H + + G SDV+ G +L+ +Y L +AR++FD
Sbjct: 112 GSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFD------------ 159
Query: 195 MVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPD 254
KM+ K++++WN++++GL Q G + AL LFH+M+ V D
Sbjct: 160 -------------------KMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDID 200
Query: 255 KITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFE 314
+++ +++ A ++L D + +H + + G + L++MY C + A +FE
Sbjct: 201 HVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF--IFAFSSGLIDMYCNCADLYAAESVFE 258
Query: 315 EMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHV---------TFVG-LLS 364
E+ KD S+W M++ +A +G + + F M V+ N V +VG L+
Sbjct: 259 EVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVK 318
Query: 365 ACA-HSGLVEQG---------------RWC--FDVMKRVYL-IEPQ-VYHYACMVDLLSR 404
A H V+QG C ++ +++++ IE + V ++ M+ +
Sbjct: 319 GIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQ 378
Query: 405 ARLFDESVILIRSM---PMEPDVYVWGALLGGCQMHGNVELGEKVALHLI--DLEPHNHA 459
A DE++ L R M ++P+ ++L GC LG+ + + I D+E
Sbjct: 379 AGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELET 438
Query: 460 FYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSS 514
+ +Y K GRF A + +++P + N + Q ++ G +
Sbjct: 439 -ATAVISMYAKCGRFSPA---------LKAFERLPIKDAVAFNALAQGYTQIGDA 483
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 134/475 (28%), Positives = 259/475 (54%), Gaps = 39/475 (8%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+S+ GS + VF + D+ +N MI A+ +G+DD ++L +M G
Sbjct: 363 YSRCGSVHKSFGVFLSMRERDVVSWNTMISAFV-QNGLDDE----GLMLVYEMQKQGFKI 417
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ +T L+ + + G+ HA +++ G + N + LI++Y GL+ ++KLF
Sbjct: 418 DYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMN-SYLIDMYSKSGLIRISQKLF 476
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
+ GY ++ +WNS+I+G Q G ++
Sbjct: 477 EGS-------------GYAE----------------RDQATWNSMISGYTQNGHTEKTFL 507
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
+F +M + +++P+ +T+AS+L AC+Q+G++D GK +H + R ++ +V + +ALV+MY
Sbjct: 508 VFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYS 567
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
K G ++ A ++F + E+++ +T MI + HG+G +A FL M+ +G+KP+ +TFV
Sbjct: 568 KAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVA 627
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME 421
+LSAC++SGL+++G F+ M+ VY I+P HY C+ D+L R +E+ ++ + E
Sbjct: 628 VLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEE 687
Query: 422 PDVY-VWGALLGGCQMHGNVELGEKVALHLIDLEPHNH--AFYMNLCDIYGKAGRFDAAK 478
++ +WG+LLG C++HG +EL E V+ L + + + + L ++Y + ++ +
Sbjct: 688 GNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVD 747
Query: 479 RIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
++R ++E+ ++K++ G S IEI G V F + ++ ++D L +M+
Sbjct: 748 KVRRGMREKGLKKEV-GRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMR 801
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 170/338 (50%), Gaps = 45/338 (13%)
Query: 179 KLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKE 238
K F E+P+ V NS+++ Y R G + + +F M ++++SWN++I+ VQ GL E
Sbjct: 346 KNFRELPI---VIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDE 402
Query: 239 ALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVN 298
L L +EMQ+ K D IT+ ++LSA + L + GK H++L R GI+ + + + L++
Sbjct: 403 GLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLID 461
Query: 299 MYGKCGLVQQAFEIFEE--MPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNH 356
MY K GL++ + ++FE E+D + W +MIS + +G K F F +M ++PN
Sbjct: 462 MYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNA 521
Query: 357 VTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRA-------RLFD 409
VT +L AC+ G V+ G+ R YL + V+ + +VD+ S+A +F
Sbjct: 522 VTVASILPACSQIGSVDLGKQLHGFSIRQYL-DQNVFVASALVDMYSKAGAIKYAEDMFS 580
Query: 410 ES------------------------VILIRSMP---MEPDVYVWGALLGGCQMHGNVEL 442
++ + L SM ++PD + A+L C G ++
Sbjct: 581 QTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDE 640
Query: 443 GEKV---ALHLIDLEPHNHAFYMNLCDIYGKAGRFDAA 477
G K+ + +++P + Y + D+ G+ GR + A
Sbjct: 641 GLKIFEEMREVYNIQPSSE-HYCCITDMLGRVGRVNEA 677
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 160/345 (46%), Gaps = 37/345 (10%)
Query: 179 KLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKE 238
KL DE V D+ +S + Y G ++++ +F +NI WN++I VQ E
Sbjct: 242 KLGDEY-VKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVE 300
Query: 239 ALELFHE-MQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALV 297
++ELF E + + D++T SA + L ++ G+ H ++ +N E +VI +L+
Sbjct: 301 SIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLM 360
Query: 298 NMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHV 357
MY +CG V ++F +F M E+D +W MIS F +GL + EM++ G K +++
Sbjct: 361 VMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYI 420
Query: 358 TFVGLLSACA-----------HSGLVEQG-------RWCFDVMKRVYLI----------- 388
T LLSA + H+ L+ QG + D+ + LI
Sbjct: 421 TVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSG 480
Query: 389 --EPQVYHYACMVDLLSRARLFDESVILIRSM---PMEPDVYVWGALLGGCQMHGNVELG 443
E + M+ ++ +++ ++ R M + P+ ++L C G+V+LG
Sbjct: 481 YAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLG 540
Query: 444 EKVALHLIDLEPHNHAFYMN-LCDIYGKAGRFDAAKRIRNLLKER 487
+++ I + F + L D+Y KAG A+ + + KER
Sbjct: 541 KQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKER 585
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 109/486 (22%), Positives = 199/486 (40%), Gaps = 76/486 (15%)
Query: 35 HTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYA 94
H+ + P L + + +RL C + G+ A +F I P ++N +I +
Sbjct: 26 HSSTFSPPTL-TPQTPSIRSRLSKIC---QDGNPQLARQLFDAIPKPTTVLWNTIIIGF- 80
Query: 95 GMDGVDDRHFCRAMVLYKKMLCDGIFPNC--LTFPFLIKGCTRWMDGASGEIVHAQVVKF 152
+ + A++ Y +M F NC T+ +K C + +G+ VH +++
Sbjct: 81 ----ICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRC 136
Query: 153 GFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLF 212
S NSL+N+Y++C NA F+ DVV +F
Sbjct: 137 LQNSSRVVHNSLMNMYVSC---LNAPDCFE----YDVVR------------------KVF 171
Query: 213 RKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAID 272
M KN+++WN++I+ V+ G EA F M ++ VKP ++ +V A + +I
Sbjct: 172 DNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIK 231
Query: 273 HGKWVHSYLRRNGIEC--DVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISV 330
+ + + G E D+ + ++ ++MY + G ++ + +F+ E++ W MI V
Sbjct: 232 KANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGV 291
Query: 331 FALHGLGWKAFDCFLE-MERAGVKPNHVTFVGLLSACAHSGL--VEQGRW---------- 377
+ + ++ + FLE + + + VT+ LL+A A S L VE GR
Sbjct: 292 YVQNDCLVESIELFLEAIGSKEIVSDEVTY--LLAASAVSALQQVELGRQFHGFVSKNFR 349
Query: 378 ----------------CFDVMKR----VYLIEPQVYHYACMVDLLSRARLFDESVILIRS 417
C V K + + E V + M+ + L DE ++L+
Sbjct: 350 ELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYE 409
Query: 418 MPMEP---DVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRF 474
M + D ALL N E+G++ LI L D+Y K+G
Sbjct: 410 MQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLI 469
Query: 475 DAAKRI 480
++++
Sbjct: 470 RISQKL 475
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 131/372 (35%), Positives = 210/372 (56%), Gaps = 6/372 (1%)
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
N +++ +IK + D S ++ Q+ D + N++I+ Y+ + +A LF
Sbjct: 280 NVVSWNSMIKAYLKVGDVVSARLLFDQMKD----RDTISWNTMIDGYVHVSRMEDAFALF 335
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
E+P D +WN MV GY G ++ A F K K+ +SWNSII + KEA++
Sbjct: 336 SEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVD 395
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
LF M KPD T+ S+LSA L + G +H + + I DV + AL+ MY
Sbjct: 396 LFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYS 454
Query: 302 KCGLVQQAFEIFEEMP-EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
+CG + ++ IF+EM +++ W AMI +A HG +A + F M+ G+ P+H+TFV
Sbjct: 455 RCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFV 514
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
+L+ACAH+GLV++ + F M VY IEPQ+ HY+ +V++ S F+E++ +I SMP
Sbjct: 515 SVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPF 574
Query: 421 EPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
EPD VWGALL C+++ NV L A + LEP + Y+ L ++Y G +D A ++
Sbjct: 575 EPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQV 634
Query: 481 RNLLKERRVQKK 492
R ++ +R++K+
Sbjct: 635 RMNMESKRIKKE 646
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 173/438 (39%), Gaps = 124/438 (28%)
Query: 157 DVFNGNSLINLYMTCG---LLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFR 213
DV N++I+ Y++CG L ARKLFDE+P D +WN+M+ GY +N + AL LF
Sbjct: 101 DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFE 160
Query: 214 KMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASV-----LSACA-- 266
KM +N +SW+++ITG Q G A+ LF +M P +A + LS A
Sbjct: 161 KMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWV 220
Query: 267 --QLGAIDHGK---------WVHSYLRRNGIEC--------------------------D 289
Q G++ G+ + Y +R +E +
Sbjct: 221 LGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKN 280
Query: 290 VVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMI----------SVFAL------ 333
VV +++ Y K G V A +F++M ++DT +W MI FAL
Sbjct: 281 VVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPN 340
Query: 334 --------------------------------HGLGW--------------KAFDCFLEM 347
H + W +A D F+ M
Sbjct: 341 RDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRM 400
Query: 348 ERAGVKPNHVTFVGLLSACAHSGLV--EQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRA 405
G KP+ T LLSA +GLV G ++ V + P V + ++ + SR
Sbjct: 401 NIEGEKPDPHTLTSLLSAS--TGLVNLRLGMQMHQIV--VKTVIPDVPVHNALITMYSRC 456
Query: 406 RLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHN-----HAF 460
ES + M ++ +V W A++GG HGN AL+L N H
Sbjct: 457 GEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNA----SEALNLFGSMKSNGIYPSHIT 512
Query: 461 YMNLCDIYGKAGRFDAAK 478
++++ + AG D AK
Sbjct: 513 FVSVLNACAHAGLVDEAK 530
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 142/318 (44%), Gaps = 39/318 (12%)
Query: 71 ATNVFHMINNPDLRVYNIMIRAYAGMDGVD--------------------------DRHF 104
A +F + N D +N+M+ YA + V+ ++ +
Sbjct: 331 AFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDY 390
Query: 105 CRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSL 164
A+ L+ +M +G P+ T L+ T ++ G +H VVK + DV N+L
Sbjct: 391 KEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVK-TVIPDVPVHNAL 449
Query: 165 INLYMTCGLLSNARKLFDEIPVT-DVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNI--- 220
I +Y CG + +R++FDE+ + +V+TWN+M+ GY +G AL+LF M I
Sbjct: 450 ITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPS 509
Query: 221 -ISWNSIITGLVQGGLAKEALELFHEMQQI-SVKPDKITIASVLSACAQLGAIDHGKWVH 278
I++ S++ GL EA F M + ++P +S+++ + G + ++
Sbjct: 510 HITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYII 569
Query: 279 SYLRRNGIECDVVIGTALVN---MYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHG 335
+ + E D + AL++ +Y GL A E + + ++ + + +++A G
Sbjct: 570 TSM---PFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMG 626
Query: 336 LGWKAFDCFLEMERAGVK 353
L +A + ME +K
Sbjct: 627 LWDEASQVRMNMESKRIK 644
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 141/352 (40%), Gaps = 67/352 (19%)
Query: 162 NSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNII 221
N +N + G ++ AR +F+++ + VTWN+M+ GY++ ++ A LF M ++++
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 222 SWNSIITGLVQ-GGLA--KEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVH 278
+WN++I+G V GG+ +EA +LF EM D + +++S A+ I +
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEMPS----RDSFSWNTMISGYAKNRRIGEALLLF 159
Query: 279 SYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVF----ALH 334
+ E + V +A++ + + G V A +F +MP KD+S A+++ L
Sbjct: 160 EKMP----ERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLS 215
Query: 335 GLGW--KAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVM---------- 382
W + + V + VG G VE R FD +
Sbjct: 216 EAAWVLGQYGSLVSGREDLVYAYNTLIVGY----GQRGQVEAARCLFDQIPDLCGDDHGG 271
Query: 383 -------KRVYLIEPQVYHYACMVDLLSRARLFDE------------------------S 411
K V + Y + D++S LFD+ +
Sbjct: 272 EFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDA 331
Query: 412 VILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMN 463
L MP D + W ++ G GNVEL A H + P H N
Sbjct: 332 FALFSEMP-NRDAHSWNMMVSGYASVGNVEL----ARHYFEKTPEKHTVSWN 378
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 235 bits (599), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 139/482 (28%), Positives = 236/482 (48%), Gaps = 32/482 (6%)
Query: 49 QYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAM 108
++ ++ R ++K GS A +F ++ + ++ YN MI + MD + D A
Sbjct: 284 EFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAF 343
Query: 109 VLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLY 168
L+ M G+ P+ TF ++K C+ G +HA + K F SD F G++LI LY
Sbjct: 344 KLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELY 403
Query: 169 MTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIIT 228
G ++ + F + ++I SW S+I
Sbjct: 404 ALMG-------------------------------STEDGMQCFASTSKQDIASWTSMID 432
Query: 229 GLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIEC 288
VQ + A +LF ++ ++P++ T++ ++SACA A+ G+ + Y ++GI+
Sbjct: 433 CHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDA 492
Query: 289 DVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEME 348
+ T+ ++MY K G + A ++F E+ D + ++AMIS A HG +A + F M+
Sbjct: 493 FTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMK 552
Query: 349 RAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLF 408
G+KPN F+G+L AC H GLV QG F MK Y I P H+ C+VDLL R
Sbjct: 553 THGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRL 612
Query: 409 DESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIY 468
++ LI S + W ALL C+++ + +G++VA L++LEP Y+ L +IY
Sbjct: 613 SDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIY 672
Query: 469 GKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRL 528
+G +A+ +R L+++R V+K+ P S I I F+ S + + +L+ +
Sbjct: 673 NDSGVNSSAEEVRELMRDRGVKKE-PALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Query: 529 CN 530
N
Sbjct: 732 DN 733
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 48/317 (15%)
Query: 70 YATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFL 129
+A +F + ++ +N +I Y M + +AM L+ + + + T+
Sbjct: 100 FARQLFDRMPERNIISFNSLISGYTQMG-----FYEQAMELFLEAREANLKLDKFTYAGA 154
Query: 130 IKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDV 189
+ C D GE++H VV G VF N LI++Y CG L A LFD D
Sbjct: 155 LGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQ 214
Query: 190 VTWNSMVIGYLRNGGLDNALDLFRKM--NGKNIISWNSIITGLVQGGLAKEALELFHEMQ 247
V+WNS++ GY+R G + L+L KM +G N+ ++
Sbjct: 215 VSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTY------------------------ 250
Query: 248 QISVKPDKITIASVLSACA---QLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCG 304
+ SVL AC G I+ G +H Y + G+E D+V+ TAL++MY K G
Sbjct: 251 ---------ALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNG 301
Query: 305 LVQQAFEIFEEMPEKDTSAWTAMISVF-----ALHGLGWKAFDCFLEMERAGVKPNHVTF 359
+++A ++F MP K+ + AMIS F +AF F++M+R G++P+ TF
Sbjct: 302 SLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTF 361
Query: 360 VGLLSACAHSGLVEQGR 376
+L AC+ + +E GR
Sbjct: 362 SVVLKACSAAKTLEYGR 378
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 20/323 (6%)
Query: 208 ALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQ 267
A LF +M +NIIS+NS+I+G Q G ++A+ELF E ++ ++K DK T A L C +
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGE 160
Query: 268 LGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAM 327
+D G+ +H + NG+ V + L++MY KCG + QA +F+ E+D +W ++
Sbjct: 161 RCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSL 220
Query: 328 ISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACA---HSGLVEQGRWCFDVMKR 384
IS + G + + +M R G+ +L AC + G +E+G +
Sbjct: 221 ISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAK 280
Query: 385 VYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGG-CQMHGNVELG 443
+ + E + ++D+ ++ E++ L MP +V + A++ G QM +
Sbjct: 281 LGM-EFDIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMISGFLQMDEITDEA 338
Query: 444 EKVALHLI------DLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQK-KIPGC 496
A L LEP F + L A + ++I L+ + Q + G
Sbjct: 339 SSEAFKLFMDMQRRGLEPSPSTFSVVL-KACSAAKTLEYGRQIHALICKNNFQSDEFIGS 397
Query: 497 SMIEINGVVQEFSAGGSSELPMK 519
++IE+ ++ GS+E M+
Sbjct: 398 ALIELYALM------GSTEDGMQ 414
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 106/223 (47%), Gaps = 5/223 (2%)
Query: 212 FRKMNGKNIISWNSIITGLVQG-GLAKEALELFHEMQQISVKPDKITIASVLSACAQLGA 270
FR N I+ +S++T + + GL L + + ++ + I + A+ G+
Sbjct: 5 FRAKTFFNNIAQDSLVTLITKRVGLGYRFLSSLCQPKNTALDSEGYKI--LFQTAAKSGS 62
Query: 271 IDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISV 330
+ GK H ++ ++ + + + L+NMY KC + A ++F+ MPE++ ++ ++IS
Sbjct: 63 VVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISG 122
Query: 331 FALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEP 390
+ G +A + FLE A +K + T+ G L C ++ G ++ V +
Sbjct: 123 YTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVV-VNGLSQ 181
Query: 391 QVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGG 433
QV+ ++D+ S+ D+++ L E D W +L+ G
Sbjct: 182 QVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLISG 223
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 146/500 (29%), Positives = 246/500 (49%), Gaps = 59/500 (11%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAY--AG--------MDGVDDRHFC--RAMV 109
+SK G F A V+ + + NI+I Y AG D + DR AM+
Sbjct: 4 YSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMI 63
Query: 110 --------------LYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFL 155
L+++M G P+ T + G + G+ +H +K+G
Sbjct: 64 AGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE 123
Query: 156 SDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKM 215
D+ +SL ++YM RNG L + + R M
Sbjct: 124 LDLVVNSSLAHMYM-------------------------------RNGKLQDGEIVIRSM 152
Query: 216 NGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGK 275
+N+++WN++I G Q G + L L+ M+ +P+KIT +VLS+C+ L G+
Sbjct: 153 PVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQ 212
Query: 276 WVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHG 335
+H+ + G V + ++L++MY KCG + A + F E ++D W++MIS + HG
Sbjct: 213 QIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHG 272
Query: 336 LGWKAFDCFLEM-ERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYH 394
G +A + F M E+ ++ N V F+ LL AC+HSGL ++G FD+M Y +P + H
Sbjct: 273 QGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKH 332
Query: 395 YACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLE 454
Y C+VDLL RA D++ +IRSMP++ D+ +W LL C +H N E+ ++V ++ ++
Sbjct: 333 YTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQID 392
Query: 455 PHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSS 514
P++ A Y+ L +++ A R+ +R ++++ V+K+ G S E G V +F G S
Sbjct: 393 PNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKE-AGISWFEHKGEVHQFKMGDRS 451
Query: 515 ELPMKDLVLILDRLCNEMKI 534
+ K++ L L EMK+
Sbjct: 452 QSKSKEIYSYLKELTLEMKL 471
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 117/212 (55%)
Query: 165 INLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWN 224
+++Y G +A ++ + + ++ N ++ GY+R G L NA +F +M + + +WN
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 225 SIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRN 284
++I GL+Q +E L LF EM + PD+ T+ SV S A L ++ G+ +H Y +
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 285 GIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCF 344
G+E D+V+ ++L +MY + G +Q + MP ++ AW +I A +G +
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 345 LEMERAGVKPNHVTFVGLLSACAHSGLVEQGR 376
M+ +G +PN +TFV +LS+C+ + QG+
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQ 212
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/439 (31%), Positives = 226/439 (51%), Gaps = 39/439 (8%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCR-AMVLYKKMLCDGIF 120
+SK GS + +F I D + MI G ++ + R A+ L+ +ML DG
Sbjct: 495 YSKCGSLEESYKLFQGIPFKDNACWASMI------SGFNEYGYLREAIGLFSEMLDDGTS 548
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
P+ T ++ C+ G+ +H ++ G + G++L+N+Y CG L AR++
Sbjct: 549 PDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQV 608
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
+D +P D V+ +S++ GY ++G + + LFR M +++G
Sbjct: 609 YDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDM----------VMSGFTM-------- 650
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
D I+S+L A A G VH+Y+ + G+ + +G++L+ MY
Sbjct: 651 -------------DSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMY 697
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
K G + + F ++ D AWTA+I+ +A HG +A + M+ G KP+ VTFV
Sbjct: 698 SKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFV 757
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
G+LSAC+H GLVE+ + + M + Y IEP+ HY CMVD L R+ E+ I +M +
Sbjct: 758 GVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHI 817
Query: 421 EPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
+PD VWG LL C++HG VELG+ A I+LEP + Y++L +I + G +D +
Sbjct: 818 KPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEET 877
Query: 481 RNLLKERRVQKKIPGCSMI 499
R L+K VQK+ PG S +
Sbjct: 878 RKLMKGTGVQKE-PGWSSV 895
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 147/334 (44%), Gaps = 47/334 (14%)
Query: 49 QYHLITRLLFSCS----------FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDG 98
Q HL+ R L +S GS A +F I PD+ NIMI Y
Sbjct: 71 QAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYK---- 126
Query: 99 VDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDV 158
R F ++ + KM G N +++ +I C+ E+V +K G+
Sbjct: 127 -QHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYF--- 182
Query: 159 FNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK 218
F E V ++++ + +N ++A +FR
Sbjct: 183 ----------------------FYE------VVESALIDVFSKNLRFEDAYKVFRDSLSA 214
Query: 219 NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVH 278
N+ WN+II G ++ +LFHEM KPD T +SVL+ACA L + GK V
Sbjct: 215 NVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQ 274
Query: 279 SYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGW 338
+ + + G E DV + TA+V++Y KCG + +A E+F +P +WT M+S + +
Sbjct: 275 ARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAF 333
Query: 339 KAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLV 372
A + F EM +GV+ N+ T ++SAC +V
Sbjct: 334 SALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 176/382 (46%), Gaps = 46/382 (12%)
Query: 62 FSKYGSFTYATNVFHMINNPDLR-VYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF 120
+SK G + VF +++ + + N+MI +++ + +A+ L+ +ML +G+
Sbjct: 396 YSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFS-----QSKKPGKAIRLFTRMLQEGL- 449
Query: 121 PNCLTFPFLIKGCTRWMDGAS-GEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARK 179
T F + +D + G+ VH +K G + D+ G+SL LY CG
Sbjct: 450 ---RTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCG------- 499
Query: 180 LFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEA 239
L+ + LF+ + K+ W S+I+G + G +EA
Sbjct: 500 ------------------------SLEESYKLFQGIPFKDNACWASMISGFNEYGYLREA 535
Query: 240 LELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNM 299
+ LF EM PD+ T+A+VL+ C+ ++ GK +H Y R GI+ + +G+ALVNM
Sbjct: 536 IGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNM 595
Query: 300 YGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
Y KCG ++ A ++++ +PE D + +++IS ++ HGL F F +M +G +
Sbjct: 596 YSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAI 655
Query: 360 VGLLSACAHSGLVEQGRWCFDVMKRVYL-IEPQVYHYACMVDLLSRARLFDESVILIRSM 418
+L A A S G + ++ L EP V + ++ + S+ D+ S
Sbjct: 656 SSILKAAALSDESSLGAQVHAYITKIGLCTEPSV--GSSLLTMYSKFGSIDDCCKAF-SQ 712
Query: 419 PMEPDVYVWGALLGGCQMHGNV 440
PD+ W AL+ HG
Sbjct: 713 INGPDLIAWTALIASYAQHGKA 734
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 192/451 (42%), Gaps = 78/451 (17%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
++K G A VF I NP + + +M+ Y + A+ ++K+M G+
Sbjct: 295 YAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDA-----FSALEIFKEMRHSGVEI 349
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
N T +I C R VHA V K GF D +LI++Y G + + ++F
Sbjct: 350 NNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVF 409
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
+++ D+ R+ NI+ N +IT Q +A+
Sbjct: 410 EDLD------------------------DIQRQ----NIV--NVMITSFSQSKKPGKAIR 439
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
LF M Q ++ D+ ++ S+LS L ++ GK VH Y ++G+ D+ +G++L +Y
Sbjct: 440 LFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYS 496
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KCG +++++++F+ +P KD + W +MIS F +G +A F EM G P+ T
Sbjct: 497 KCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAA 556
Query: 362 LLSACAH--------------------------SGLVEQGRWC--FDVMKRVYLIEPQVY 393
+L+ C+ S LV C + ++VY P++
Sbjct: 557 VLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELD 616
Query: 394 HYAC--MVDLLSRARLFDESVILIRSMPMEP---DVYVWGALLGGCQMHGNVELGEKVAL 448
+C ++ S+ L + +L R M M D + ++L + LG +V
Sbjct: 617 PVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHA 676
Query: 449 HLIDL----EPHNHAFYMNLCDIYGKAGRFD 475
++ + EP + +L +Y K G D
Sbjct: 677 YITKIGLCTEPSVGS---SLLTMYSKFGSID 704
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 123/248 (49%), Gaps = 7/248 (2%)
Query: 188 DVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQ 247
DV S++ Y +G + +A LF + +++S N +I+G Q L +E+L F +M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 248 QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQ 307
+ + ++I+ SV+SAC+ L A + V + + G V+ +AL++++ K +
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202
Query: 308 QAFEIFEEMPEKDTSAWTAMISVFALHGLGWKA-FDCFLEMERAGVKPNHVTFVGLLSAC 366
A+++F + + W +I+ AL + A FD F EM KP+ T+ +L+AC
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAG-ALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAAC 261
Query: 367 AHSGLVEQGRWCFDVMKRVYLIEPQ-VYHYACMVDLLSRARLFDESVILIRSMPMEPDVY 425
A +E+ R+ V RV + V+ +VDL ++ E++ + +P P V
Sbjct: 262 AS---LEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP-NPSVV 317
Query: 426 VWGALLGG 433
W +L G
Sbjct: 318 SWTVMLSG 325
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 147/468 (31%), Positives = 229/468 (48%), Gaps = 51/468 (10%)
Query: 106 RAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLI 165
+A+ +++KM G+ PN +T + C+ G VH+ VK GF+ DV GNSL+
Sbjct: 335 QALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLV 394
Query: 166 NLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGY-------------------------- 199
++Y CG L +ARK+FD + DV TWNSM+ GY
Sbjct: 395 DMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNII 454
Query: 200 ---------LRNGGLDNALDLFRKM--NGK---NIISWNSIITGLVQGGLAKEALELFHE 245
++NG A+DLF++M +GK N +WN II G +Q G EALELF +
Sbjct: 455 TWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRK 514
Query: 246 MQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGL 305
MQ P+ +TI S+L ACA L + +H + R ++ + AL + Y K G
Sbjct: 515 MQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGD 574
Query: 306 VQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSA 365
++ + IF M KD W ++I + LHG A F +M+ G+ PN T ++ A
Sbjct: 575 IEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILA 634
Query: 366 CAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVY 425
G V++G+ F + Y I P + H + MV L RA +E++ I+ M ++ +
Sbjct: 635 HGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETP 694
Query: 426 VWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIY---GKAGRFDAAKRIR- 481
+W + L GC++HG++++ A +L LEP N A + IY K GR + R
Sbjct: 695 IWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRR 754
Query: 482 -NLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRL 528
NLL KK G S IE+ ++ F+ G S+L L +++++
Sbjct: 755 DNLL------KKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKM 796
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 138/533 (25%), Positives = 249/533 (46%), Gaps = 79/533 (14%)
Query: 5 SLIESKSLTLKNALSRLIEQCKNLREL---KRIHTQ--ILTSPNLHSSDQYHLITRLLFS 59
SL + S ++ +L+E C + + + +H + + T P++ + T+LL
Sbjct: 71 SLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPDVF------VETKLL-- 122
Query: 60 CSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGI 119
++K G A VF + +L ++ MI AY+ + + L++ M+ DG+
Sbjct: 123 SMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYS-----RENRWREVAKLFRLMMKDGV 177
Query: 120 FPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARK 179
P+ FP +++GC D +G+++H+ V+K G S + NS++ +Y CG L A K
Sbjct: 178 LPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATK 237
Query: 180 LFDEIPVTDVVTWNSMVIGYLRNG-------------------GL--------------- 205
F + DV+ WNS+++ Y +NG GL
Sbjct: 238 FFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGK 297
Query: 206 -DNALDLFRKMNG----KNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIAS 260
D A+DL +KM ++ +W ++I+GL+ G+ +AL++F +M V P+ +TI S
Sbjct: 298 CDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMS 357
Query: 261 VLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKD 320
+SAC+ L I+ G VHS + G DV++G +LV+MY KCG ++ A ++F+ + KD
Sbjct: 358 AVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKD 417
Query: 321 TSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFD 380
W +MI+ + G KA++ F M+ A ++PN +T+ ++S +G + F
Sbjct: 418 VYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQ 477
Query: 381 VMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME---PDVYVWGALLGGC--- 434
M++ ++ + ++ + DE++ L R M P+ +LL C
Sbjct: 478 RMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANL 537
Query: 435 -------QMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
++HG V A+ HA L D Y K+G + ++ I
Sbjct: 538 LGAKMVREIHGCVLRRNLDAI---------HAVKNALTDTYAKSGDIEYSRTI 581
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 169/376 (44%), Gaps = 51/376 (13%)
Query: 125 TFPFLIKGCTRWMDGAS---GEIVHAQVVKFGFLS--DVFNGNSLINLYMTCGLLSNARK 179
T+ L++ C +D S G I+HA +FG + DVF L+++Y CG +++ARK
Sbjct: 83 TYLKLLESC---IDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARK 136
Query: 180 LFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEA 239
+FD M +N+ +W+++I + +E
Sbjct: 137 VFDS-------------------------------MRERNLFTWSAMIGAYSRENRWREV 165
Query: 240 LELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNM 299
+LF M + V PD +L CA G ++ GK +HS + + G+ + + +++ +
Sbjct: 166 AKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAV 225
Query: 300 YGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
Y KCG + A + F M E+D AW +++ + +G +A + EME+ G+ P VT+
Sbjct: 226 YAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW 285
Query: 360 VGLLSACAHSGLVEQGRWCFDVMKRV--YLIEPQVYHYACMVDLLSRARLFDESVILIRS 417
L+ G + D+M+++ + I V+ + M+ L + +++ + R
Sbjct: 286 NILIGGYNQLGKCDAA---MDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRK 342
Query: 418 MPME---PDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMN-LCDIYGKAGR 473
M + P+ + + C + G +V + + + N L D+Y K G+
Sbjct: 343 MFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGK 402
Query: 474 FDAAKRIRNLLKERRV 489
+ A+++ + +K + V
Sbjct: 403 LEDARKVFDSVKNKDV 418
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 183/425 (43%), Gaps = 92/425 (21%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
++K G +AT F + D+ +N ++ AY + +H A+ L K+M +GI P
Sbjct: 226 YAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQ----NGKHE-EAVELVKEMEKEGISP 280
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+T+ LI G + + + ++ FG +DVF ++I+ + G+ A +F
Sbjct: 281 GLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMF 340
Query: 182 DE------IP---------------------------------VTDVVTWNSMVIGYLRN 202
+ +P + DV+ NS+V Y +
Sbjct: 341 RKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKC 400
Query: 203 GGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVL 262
G L++A +F + K++ +WNS+ITG Q G +A ELF MQ +++P+ IT +++
Sbjct: 401 GKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMI 460
Query: 263 SACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMP----- 317
S Y K G +A ++F+ M
Sbjct: 461 SG-----------------------------------YIKNGDEGEAMDLFQRMEKDGKV 485
Query: 318 EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAH---SGLVEQ 374
+++T+ W +I+ + +G +A + F +M+ + PN VT + LL ACA+ + +V +
Sbjct: 486 QRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVRE 545
Query: 375 GRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGC 434
C V++R V + + D +++ + S + M + D+ W +L+GG
Sbjct: 546 IHGC--VLRRNLDAIHAVKN--ALTDTYAKSGDIEYSRTIFLGMETK-DIITWNSLIGGY 600
Query: 435 QMHGN 439
+HG+
Sbjct: 601 VLHGS 605
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 106/265 (40%), Gaps = 39/265 (14%)
Query: 212 FRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAI 271
F K NII + L + G EA + + Q K + T +L +C G+I
Sbjct: 39 FTKKKEPNIIP-DEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSI 97
Query: 272 DHGKWVHSYLRRNGI--ECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMIS 329
G+ +H+ R G+ E DV + T L++MY KCG + A ++F+ M E++ W+AMI
Sbjct: 98 HLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIG 154
Query: 330 VFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGR------------W 377
++ + F M + GV P+ F +L CA+ G VE G+
Sbjct: 155 AYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSS 214
Query: 378 CFDVMKRVYLIEPQVYHYACMVDLLSRARLFD------------------ESVILIRSMP 419
C V + + + R R D E+V L++ M
Sbjct: 215 CLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEME 274
Query: 420 ME---PDVYVWGALLGGCQMHGNVE 441
E P + W L+GG G +
Sbjct: 275 KEGISPGLVTWNILIGGYNQLGKCD 299
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 111/253 (43%), Gaps = 38/253 (15%)
Query: 85 VYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEI 144
+N++I Y +G D A+ L++KM PN +T L+ C +
Sbjct: 491 TWNLIIAGYI-QNGKKDE----ALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVRE 545
Query: 145 VHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGG 204
+H V++ + N+L + Y G + +R +F + D++TWNS++ GY+ +G
Sbjct: 546 IHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGS 605
Query: 205 LDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSA 264
AL LF +M + I P++ T++S++ A
Sbjct: 606 YGPALALFNQMKTQGIT-------------------------------PNRGTLSSIILA 634
Query: 265 CAQLGAIDHGKWV-HSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMP-EKDTS 322
+G +D GK V +S I + +A+V +YG+ +++A + +EM + +T
Sbjct: 635 HGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETP 694
Query: 323 AWTAMISVFALHG 335
W + ++ +HG
Sbjct: 695 IWESFLTGCRIHG 707
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 146/490 (29%), Positives = 242/490 (49%), Gaps = 77/490 (15%)
Query: 107 AMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLIN 166
AM Y++M +GI P+ TFP L+KG + M+ + + VH K GF SD + G+ L+
Sbjct: 145 AMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVT 203
Query: 167 LYMTCGLLSNARKLFDEIP-VTDVVTWNSMVIGYLRNGGLDNALDLFRKM---------- 215
Y + +A+K+FDE+P D V WN++V GY + ++AL +F KM
Sbjct: 204 SYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRH 263
Query: 216 -----------------------------NGKNIISWNSIITGLVQGGLAKEALELFHEM 246
+G +I+ N++I + +EA +F M
Sbjct: 264 TITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAM 323
Query: 247 QQ-------------------------------ISVKPDKITIASVLSACAQLGAIDHGK 275
+ ++PD +T+ +VL C +L ++ G+
Sbjct: 324 DERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGR 383
Query: 276 WVHSYLRRNGI----ECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVF 331
+H Y+ +G+ + I +L++MY KCG ++ A +F+ M KD+++W MI+ +
Sbjct: 384 EIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGY 443
Query: 332 ALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQ 391
+ G A D F M RAGVKP+ +TFVGLL AC+HSG + +GR M+ VY I P
Sbjct: 444 GVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPT 503
Query: 392 VYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLI 451
HYAC++D+L RA +E+ L S P+ + VW ++L C++HGN +L L
Sbjct: 504 SDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLH 563
Query: 452 DLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAG 511
+LEP + Y+ + ++Y +AG+++ +R+ ++++ V KK PGCS I + V F G
Sbjct: 564 ELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNV-KKTPGCSWIVLKNGVHTFFTG 622
Query: 512 GSSELPMKDL 521
+ K +
Sbjct: 623 NQTHPEFKSI 632
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 144/312 (46%), Gaps = 37/312 (11%)
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFN-GNSLINLYMTCGLLSNARKL 180
N T ++ C + D SG+ +H +V+ GFL D G SL+N+Y CGL+ A +
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
F GG + +++ +N++I+G V G +A+
Sbjct: 119 F---------------------GGSE-----------RDVFGYNALISGFVVNGSPLDAM 146
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
E + EM+ + PDK T S+L + D K VH + G + D +G+ LV Y
Sbjct: 147 ETYREMRANGILPDKYTFPSLLKGSDAMELSDVKK-VHGLAFKLGFDSDCYVGSGLVTSY 205
Query: 301 GKCGLVQQAFEIFEEMPEKDTSA-WTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
K V+ A ++F+E+P++D S W A+++ ++ A F +M GV + T
Sbjct: 206 SKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTI 265
Query: 360 VGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP 419
+LSA SG ++ GR + + V A ++D+ +++ +E+ + +M
Sbjct: 266 TSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNA-LIDMYGKSKWLEEANSIFEAMD 324
Query: 420 MEPDVYVWGALL 431
E D++ W ++L
Sbjct: 325 -ERDLFTWNSVL 335
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 18/185 (9%)
Query: 257 TIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVV-IGTALVNMYGKCGLVQQAFEIFEE 315
T + L CAQ G+ +H ++ R G D GT+LVNMY KCGL+++A +F
Sbjct: 62 TCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG 121
Query: 316 MPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQG 375
E+D + A+IS F ++G A + + EM G+ P+ TF LL L +
Sbjct: 122 -SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVK 180
Query: 376 -------RWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWG 428
+ FD Y+ V Y+ + + ++FDE +P D +W
Sbjct: 181 KVHGLAFKLGFD--SDCYVGSGLVTSYSKFMSVEDAQKVFDE-------LPDRDDSVLWN 231
Query: 429 ALLGG 433
AL+ G
Sbjct: 232 ALVNG 236
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 145/459 (31%), Positives = 234/459 (50%), Gaps = 46/459 (10%)
Query: 48 DQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRA 107
++Y L++ + +S + F A VF + DL +N MI +Y + A
Sbjct: 320 EKYTLVSNATMTM-YSSFEDFGAAHKVFESLEEKDLVTWNTMISSYN-----QAKLGKSA 373
Query: 108 MVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINL 167
M +YK+M G+ P+ TF L+ +D E+V A ++KFG S + N+LI+
Sbjct: 374 MSVYKRMHIIGVKPDEFTFGSLLATS---LDLDVLEMVQACIIKFGLSSKIEISNALIS- 429
Query: 168 YMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSII 227
Y +NG ++ A LF + KN+ISWN+II
Sbjct: 430 ------------------------------AYSKNGQIEKADLLFERSLRKNLISWNAII 459
Query: 228 TGLVQGGLAKEALELFHEM--QQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNG 285
+G G E LE F + ++ + PD T++++LS C ++ G H+Y+ R+G
Sbjct: 460 SGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHG 519
Query: 286 IECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFL 345
+ +IG AL+NMY +CG +Q + E+F +M EKD +W ++IS ++ HG G A + +
Sbjct: 520 QFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYK 579
Query: 346 EMERAG-VKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSR 404
M+ G V P+ TF +LSAC+H+GLVE+G F+ M + + V H++C+VDLL R
Sbjct: 580 TMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGR 639
Query: 405 ARLFD--ESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYM 462
A D ES++ I + V VW AL C HG+++LG+ VA L++ E + + Y+
Sbjct: 640 AGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYV 699
Query: 463 NLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEI 501
L +IY AG + A+ R + K+ GCS + +
Sbjct: 700 QLSNIYAGAGMWKEAEETRRAINMIGAMKQ-RGCSWMRL 737
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 196/430 (45%), Gaps = 46/430 (10%)
Query: 116 CDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLS 175
C + P+ + I D G VH ++ G L N+L++LY G L+
Sbjct: 50 CTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLA 109
Query: 176 NARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIIS-WNSIITGLVQGG 234
+ +K FDEI DV +W +++ + G ++ A ++F KM ++ ++ WN++ITG + G
Sbjct: 110 SLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESG 169
Query: 235 LAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGT 294
+ ++ELF EM ++ V+ DK A++LS C G++D GK VHS + + G +
Sbjct: 170 YHETSVELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVN 228
Query: 295 ALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGW-KAFDCFLEMERAGVK 353
AL+ MY C +V A +FEE T + + L G ++ F +M A ++
Sbjct: 229 ALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDESLLVFRKMLEASLR 288
Query: 354 PNHVTFVGLLSACAHSGLVEQGRWC-------------------------FDVMKRVY-- 386
P +TFV ++ +C+ + + Q F +V+
Sbjct: 289 PTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFES 348
Query: 387 LIEPQVYHYACMVDLLSRARLFDESVILIRSMPM---EPDVYVWGALLGGCQMHGNVELG 443
L E + + M+ ++A+L ++ + + M + +PD + +G+LL ++++
Sbjct: 349 LEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSL---DLDVL 405
Query: 444 EKVALHLIDLEPHNHAFYMN-LCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEIN 502
E V +I + N L Y K G+ + A +LL ER ++K ++I N
Sbjct: 406 EMVQACIIKFGLSSKIEISNALISAYSKNGQIEKA----DLLFERSLRK-----NLISWN 456
Query: 503 GVVQEFSAGG 512
++ F G
Sbjct: 457 AIISGFYHNG 466
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 132/545 (24%), Positives = 211/545 (38%), Gaps = 109/545 (20%)
Query: 14 LKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATN 73
+ N L L E+ NL LK+ +I P+++S L S SF K G YA
Sbjct: 94 VSNTLLSLYERLGNLASLKKKFDEI-DEPDVYS-------WTTLLSASF-KLGDIEYAFE 144
Query: 74 VF-HMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMV-LYKKMLCDGIFPNCLTFPFLIK 131
VF M D+ ++N MI G + + V L+++M G+ + F ++
Sbjct: 145 VFDKMPERDDVAIWNAMIT------GCKESGYHETSVELFREMHKLGVRHDKFGFATILS 198
Query: 132 GCTRWMDGAS---GEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTD 188
C D S G+ VH+ V+K GF N+LI +Y C ++ +A +F+E TD
Sbjct: 199 MC----DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEE---TD 251
Query: 189 VVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQ 248
V ++ +++N +I GL G E+L +F +M +
Sbjct: 252 VAV--------------------------RDQVTFNVVIDGLA-GFKRDESLLVFRKMLE 284
Query: 249 ISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQ 308
S++P +T SV+ +C+ G VH + G E ++ A + MY
Sbjct: 285 ASLRPTDLTFVSVMGSCSCAAM---GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGA 341
Query: 309 AFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLL----- 363
A ++FE + EKD W MIS + LG A + M GVKP+ TF LL
Sbjct: 342 AHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLD 401
Query: 364 ---------------------------SACAHSGLVEQGRWCFDVMKRVYLIE-----PQ 391
SA + +G +E+ F+ R LI
Sbjct: 402 LDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISG 461
Query: 392 VYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLI 451
YH + L R ES + I PD Y LL C ++ LG + +++
Sbjct: 462 FYHNGFPFEGLERFSCLLESEVRIL-----PDAYTLSTLLSICVSTSSLMLGSQTHAYVL 516
Query: 452 DLEPHNHAFYMN-LCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSA 510
N L ++Y + G + + N + E+ V + N ++ +S
Sbjct: 517 RHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDV---------VSWNSLISAYSR 567
Query: 511 GGSSE 515
G E
Sbjct: 568 HGEGE 572
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 111/241 (46%), Gaps = 42/241 (17%)
Query: 216 NGKNIISWNSIITGLVQGGLAKEALELFHEMQQ-ISVKPDKITIASVLSACAQLGAIDHG 274
N +++ N +TGL + G + AL+LF ++ + +++PD+ +++ ++ L G
Sbjct: 17 NSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFG 76
Query: 275 KWVHSYLRRNGIECDVVIGTALVNMYG-------------------------------KC 303
VH Y R+G+ C + L+++Y K
Sbjct: 77 GQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKL 136
Query: 304 GLVQQAFEIFEEMPEKDTSA-WTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGL 362
G ++ AFE+F++MPE+D A W AMI+ G + + F EM + GV+ + F +
Sbjct: 137 GDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATI 196
Query: 363 LSACAHSGLVEQGRWCFD-VMKRVYLIEPQVY------HYACMVDLLSRARLFDESVILI 415
LS C + G ++ G+ V+K + I V ++ C V ++ +F+E+ + +
Sbjct: 197 LSMCDY-GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQV-VVDACLVFEETDVAV 254
Query: 416 R 416
R
Sbjct: 255 R 255
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 161/554 (29%), Positives = 266/554 (48%), Gaps = 89/554 (16%)
Query: 22 IEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNP 81
+ C++ E+ RIH ++ + L D +++LL +FS YA+++F ++N
Sbjct: 35 LRSCRDTVEVSRIHGYMVKT-GLDKDD--FAVSKLL---AFSSVLDIRYASSIFEHVSNT 88
Query: 82 DLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGAS 141
+L ++N MIR Y+ D + RA ++ ++ G+ + +F +K C+R + +
Sbjct: 89 NLFMFNTMIRGYSISDEPE-----RAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSI 143
Query: 142 GEIVHAQVVK--FGFLSDVFNG------------------------------NSLINLYM 169
GE +H ++ F +D+ N ++L+N Y+
Sbjct: 144 GEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYL 203
Query: 170 TCGLLSNARKLFDEIPVTDVVTWNSMVIGYL----------------------------- 200
+ A LF + ++VV S ++ +L
Sbjct: 204 QVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLH 263
Query: 201 ----------RNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQIS 250
+ GG+ +A +F K++++WN +I + GL +E + L +M+
Sbjct: 264 LITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEK 323
Query: 251 VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAF 310
+KP+ T +LS+CA A G+ V L I D ++GTALV+MY K GL+++A
Sbjct: 324 MKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAV 383
Query: 311 EIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCF--LEMERAGVKPNHVTFVGLLSACAH 368
EIF M +KD +WTAMIS + HGL +A F +E E V+PN +TF+ +L+AC+H
Sbjct: 384 EIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSH 443
Query: 369 SGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWG 428
GLV +G CF M Y P+V HY C+VDLL RA +E+ LIR++P+ D W
Sbjct: 444 GGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWR 503
Query: 429 ALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERR 488
ALL C+++GN +LGE V + L ++ + A + L + AG + K + N L + R
Sbjct: 504 ALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAG--NPEKSLDNELNKGR 561
Query: 489 VQKKIPGCSMIEIN 502
K G S IEI
Sbjct: 562 ---KEAGYSAIEIE 572
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 153/367 (41%), Gaps = 54/367 (14%)
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
D+ V+ ++ ++S++ + A +F ++ N+ +N++I G + A
Sbjct: 59 DDFAVSKLLAFSSVL-------DIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFS 111
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
+F++++ + D+ + + L +C++ + G+ +H R+G + AL++ Y
Sbjct: 112 VFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYC 171
Query: 302 KCGLVQQAFEIFEEMPEK-DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
CG + A ++F+EMP+ D ++ +++ + A D F M ++ V N T +
Sbjct: 172 VCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLL 231
Query: 361 GLLSA-----------CAH------------------------SGLVEQGRWCFDVMKRV 385
LSA AH +G + R FD
Sbjct: 232 SFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCA--- 288
Query: 386 YLIEPQVYHYACMVDLLSRARLFDESVILIRSM---PMEPDVYVWGALLGGCQMHGNVEL 442
I V + CM+D ++ L +E V L+R M M+P+ + LL C +
Sbjct: 289 --IRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFV 346
Query: 443 GEKVALHLIDLE--PHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIE 500
G VA L++ E + L D+Y K G + A I N +K++ V+ S
Sbjct: 347 GRTVA-DLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYG 405
Query: 501 INGVVQE 507
+G+ +E
Sbjct: 406 AHGLARE 412
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 223/451 (49%), Gaps = 38/451 (8%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ K G + + V + D+ +N +I YA +D +A+ ++ M +G+
Sbjct: 390 YGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA-----EDEDPDKALAAFQTMRVEGVSS 444
Query: 122 NCLTFPFLIKGCTRWMDG-ASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
N +T ++ C D G+ +HA +V GF SD NSLI +Y CG
Sbjct: 445 NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG-------- 496
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
L ++ DLF ++ +NII+WN+++ G +E L
Sbjct: 497 -----------------------DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVL 533
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
+L +M+ V D+ + + LSA A+L ++ G+ +H + G E D I A +MY
Sbjct: 534 KLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMY 593
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
KCG + + ++ + +W +IS HG + F EM G+KP HVTFV
Sbjct: 594 SKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFV 653
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
LL+AC+H GLV++G +D++ R + +EP + H C++DLL R+ E+ I MPM
Sbjct: 654 SLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPM 713
Query: 421 EPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
+P+ VW +LL C++HGN++ G K A +L LEP + + Y+ +++ GR++ + +
Sbjct: 714 KPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENV 773
Query: 481 RNLLKERRVQKKIPGCSMIEINGVVQEFSAG 511
R + + ++KK CS +++ V F G
Sbjct: 774 RKQMGFKNIKKK-QACSWVKLKDKVSSFGIG 803
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 165/386 (42%), Gaps = 49/386 (12%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
++ G A VF + DL +N ++ ++ V+D A+ L M+ G
Sbjct: 289 YAGAGRSVEANLVFKQMPTKDLISWNSLMASF-----VNDGRSLDALGLLCSMISSGKSV 343
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
N +TF + C G I+H VV G + GN+L+++Y G +S +R++
Sbjct: 344 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 403
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
++P DVV +WN++I G + +AL
Sbjct: 404 LQMPRRDVV-------------------------------AWNALIGGYAEDEDPDKALA 432
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAI-DHGKWVHSYLRRNGIECDVVIGTALVNMY 300
F M+ V + IT+ SVLSAC G + + GK +H+Y+ G E D + +L+ MY
Sbjct: 433 AFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMY 492
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
KCG + + ++F + ++ W AM++ A HG G + +M GV + +F
Sbjct: 493 AKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFS 552
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILI----- 415
LSA A ++E+G+ + ++ E + + D+ S+ E V ++
Sbjct: 553 EGLSAAAKLAVLEEGQQLHGLAVKLGF-EHDSFIFNAAADMYSKCGEIGEVVKMLPPSVN 611
Query: 416 RSMPMEPDVYVWGALLGGCQMHGNVE 441
RS+P W L+ HG E
Sbjct: 612 RSLPS------WNILISALGRHGYFE 631
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 163/375 (43%), Gaps = 44/375 (11%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ YG + + VF + + ++ + ++ Y+ D + +YK M +G+
Sbjct: 87 YGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS-----DKGEPEEVIDIYKGMRGEGVGC 141
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
N + +I C D + G + QVVK G S + NSLI++ + G + A +F
Sbjct: 142 NENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIF 201
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
D+ M+ ++ ISWNSI Q G +E+
Sbjct: 202 DQ-------------------------------MSERDTISWNSIAAAYAQNGHIEESFR 230
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKW---VHSYLRRNGIECDVVIGTALVN 298
+F M++ + + T++++LS LG +DH KW +H + + G + V + L+
Sbjct: 231 IFSLMRRFHDEVNSTTVSTLLSV---LGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLR 287
Query: 299 MYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVT 358
MY G +A +F++MP KD +W ++++ F G A M +G N+VT
Sbjct: 288 MYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT 347
Query: 359 FVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSM 418
F L+AC E+GR ++ L Q+ A +V + + ES ++ M
Sbjct: 348 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA-LVSMYGKIGEMSESRRVLLQM 406
Query: 419 PMEPDVYVWGALLGG 433
P DV W AL+GG
Sbjct: 407 PRR-DVVAWNALIGG 420
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 158/336 (47%), Gaps = 48/336 (14%)
Query: 104 FCRAMVLYKKMLCD-GIFPNCLTFPFLIKGCTRWMDGA---SGEIVHAQVVKFGFLSDVF 159
+ M ++KM CD GI P+ L+ C R G+ G VH V K G LSDV+
Sbjct: 22 YLEGMEFFRKM-CDLGIKPSSFVIASLVTACGR--SGSMFREGVQVHGFVAKSGLLSDVY 78
Query: 160 NGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKN 219
++++LY GL+S +RK+F+E+P +N
Sbjct: 79 VSTAILHLYGVYGLVSCSRKVFEEMP-------------------------------DRN 107
Query: 220 IISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHS 279
++SW S++ G G +E ++++ M+ V ++ +++ V+S+C L G+ +
Sbjct: 108 VVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIG 167
Query: 280 YLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWK 339
+ ++G+E + + +L++M G G V A IF++M E+DT +W ++ + +A +G +
Sbjct: 168 QVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEE 227
Query: 340 AFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMV 399
+F F M R + N T LLS H V+ +W + V ++ C+
Sbjct: 228 SFRIFSLMRRFHDEVNSTTVSTLLSVLGH---VDHQKWGRGIHGLV--VKMGFDSVVCVC 282
Query: 400 DLLSR----ARLFDESVILIRSMPMEPDVYVWGALL 431
+ L R A E+ ++ + MP + D+ W +L+
Sbjct: 283 NTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLM 317
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 155/363 (42%), Gaps = 39/363 (10%)
Query: 15 KNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNV 74
+N++S +I C L++ + + QI+ + + L S G+ YA +
Sbjct: 143 ENSMSLVISSCGLLKD-ESLGRQIIGQVVKSGLESKLAVENSLISM-LGSMGNVDYANYI 200
Query: 75 FHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCT 134
F ++ D +N + AYA + H + ++ M N T L+
Sbjct: 201 FDQMSERDTISWNSIAAAYA-----QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLG 255
Query: 135 RWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNS 194
G +H VVK GF S V N+L+ +Y G A +F ++P
Sbjct: 256 HVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT-------- 307
Query: 195 MVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPD 254
K++ISWNS++ V G + +AL L M +
Sbjct: 308 -----------------------KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVN 344
Query: 255 KITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFE 314
+T S L+AC + G+ +H + +G+ + +IG ALV+MYGK G + ++ +
Sbjct: 345 YVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLL 404
Query: 315 EMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSG-LVE 373
+MP +D AW A+I +A KA F M GV N++T V +LSAC G L+E
Sbjct: 405 QMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 464
Query: 374 QGR 376
+G+
Sbjct: 465 RGK 467
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 124/227 (54%), Gaps = 7/227 (3%)
Query: 218 KNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAI-DHGKW 276
+N +SWN++++G+V+ GL E +E F +M + +KP IAS+++AC + G++ G
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63
Query: 277 VHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGL 336
VH ++ ++G+ DV + TA++++YG GLV + ++FEEMP+++ +WT+++ ++ G
Sbjct: 64 VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE 123
Query: 337 GWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYL--IEPQVYH 394
+ D + M GV N + ++S+C GL++ ++ +V +E ++
Sbjct: 124 PEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 395 YACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVE 441
++ +L D + + M E D W ++ +G++E
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHIE 226
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 141/331 (42%), Gaps = 43/331 (12%)
Query: 7 IESKSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYG 66
+ S +T+ + LS + L K +H I+++ SD+ H+ L+ ++K G
Sbjct: 442 VSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG--FESDE-HVKNSLI--TMYAKCG 496
Query: 67 SFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTF 126
+ + ++F+ ++N ++ +N M+ A A H + L KM G+ + +F
Sbjct: 497 DLSSSQDLFNGLDNRNIITWNAMLAANA-----HHGHGEEVLKLVSKMRSFGVSLDQFSF 551
Query: 127 PFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPV 186
+ + G+ +H VK GF D F N+ ++Y CG + K+
Sbjct: 552 SEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVN 611
Query: 187 TDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEM 246
+ +WN + I+ L + G +E FHEM
Sbjct: 612 RSLPSWNIL-------------------------------ISALGRHGYFEEVCATFHEM 640
Query: 247 QQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRN-GIECDVVIGTALVNMYGKCGL 305
++ +KP +T S+L+AC+ G +D G + + R+ G+E + ++++ G+ G
Sbjct: 641 LEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGR 700
Query: 306 VQQAFEIFEEMPEKDTS-AWTAMISVFALHG 335
+ +A +MP K W ++++ +HG
Sbjct: 701 LAEAETFISKMPMKPNDLVWRSLLASCKIHG 731
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 223/451 (49%), Gaps = 38/451 (8%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ K G + + V + D+ +N +I YA +D +A+ ++ M +G+
Sbjct: 407 YGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA-----EDEDPDKALAAFQTMRVEGVSS 461
Query: 122 NCLTFPFLIKGCTRWMDG-ASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
N +T ++ C D G+ +HA +V GF SD NSLI +Y CG
Sbjct: 462 NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG-------- 513
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
L ++ DLF ++ +NII+WN+++ G +E L
Sbjct: 514 -----------------------DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVL 550
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
+L +M+ V D+ + + LSA A+L ++ G+ +H + G E D I A +MY
Sbjct: 551 KLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMY 610
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
KCG + + ++ + +W +IS HG + F EM G+KP HVTFV
Sbjct: 611 SKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFV 670
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
LL+AC+H GLV++G +D++ R + +EP + H C++DLL R+ E+ I MPM
Sbjct: 671 SLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPM 730
Query: 421 EPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
+P+ VW +LL C++HGN++ G K A +L LEP + + Y+ +++ GR++ + +
Sbjct: 731 KPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENV 790
Query: 481 RNLLKERRVQKKIPGCSMIEINGVVQEFSAG 511
R + + ++KK CS +++ V F G
Sbjct: 791 RKQMGFKNIKKK-QACSWVKLKDKVSSFGIG 820
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 165/386 (42%), Gaps = 49/386 (12%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
++ G A VF + DL +N ++ ++ V+D A+ L M+ G
Sbjct: 306 YAGAGRSVEANLVFKQMPTKDLISWNSLMASF-----VNDGRSLDALGLLCSMISSGKSV 360
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
N +TF + C G I+H VV G + GN+L+++Y G +S +R++
Sbjct: 361 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 420
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
++P DVV +WN++I G + +AL
Sbjct: 421 LQMPRRDVV-------------------------------AWNALIGGYAEDEDPDKALA 449
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAI-DHGKWVHSYLRRNGIECDVVIGTALVNMY 300
F M+ V + IT+ SVLSAC G + + GK +H+Y+ G E D + +L+ MY
Sbjct: 450 AFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMY 509
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
KCG + + ++F + ++ W AM++ A HG G + +M GV + +F
Sbjct: 510 AKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFS 569
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILI----- 415
LSA A ++E+G+ + ++ E + + D+ S+ E V ++
Sbjct: 570 EGLSAAAKLAVLEEGQQLHGLAVKLGF-EHDSFIFNAAADMYSKCGEIGEVVKMLPPSVN 628
Query: 416 RSMPMEPDVYVWGALLGGCQMHGNVE 441
RS+P W L+ HG E
Sbjct: 629 RSLP------SWNILISALGRHGYFE 648
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 163/375 (43%), Gaps = 44/375 (11%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ YG + + VF + + ++ + ++ Y+ D + +YK M +G+
Sbjct: 104 YGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS-----DKGEPEEVIDIYKGMRGEGVGC 158
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
N + +I C D + G + QVVK G S + NSLI++ + G + A +F
Sbjct: 159 NENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIF 218
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
D+ M+ ++ ISWNSI Q G +E+
Sbjct: 219 DQ-------------------------------MSERDTISWNSIAAAYAQNGHIEESFR 247
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKW---VHSYLRRNGIECDVVIGTALVN 298
+F M++ + + T++++LS LG +DH KW +H + + G + V + L+
Sbjct: 248 IFSLMRRFHDEVNSTTVSTLLSV---LGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLR 304
Query: 299 MYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVT 358
MY G +A +F++MP KD +W ++++ F G A M +G N+VT
Sbjct: 305 MYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT 364
Query: 359 FVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSM 418
F L+AC E+GR ++ L Q+ A +V + + ES ++ M
Sbjct: 365 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA-LVSMYGKIGEMSESRRVLLQM 423
Query: 419 PMEPDVYVWGALLGG 433
P DV W AL+GG
Sbjct: 424 PRR-DVVAWNALIGG 437
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 175/379 (46%), Gaps = 53/379 (13%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCD-GIF 120
++K+G A ++F ++ + +N M+ V + M ++KM CD GI
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGI-----VRVGLYLEGMEFFRKM-CDLGIK 55
Query: 121 PNCLTFPFLIKGCTRWMDGA---SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNA 177
P+ L+ C R G+ G VH V K G LSDV+ ++++LY GL+S +
Sbjct: 56 PSSFVIASLVTACGR--SGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCS 113
Query: 178 RKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAK 237
RK+F+E+P +N++SW S++ G G +
Sbjct: 114 RKVFEEMP-------------------------------DRNVVSWTSLMVGYSDKGEPE 142
Query: 238 EALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALV 297
E ++++ M+ V ++ +++ V+S+C L G+ + + ++G+E + + +L+
Sbjct: 143 EVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLI 202
Query: 298 NMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHV 357
+M G G V A IF++M E+DT +W ++ + +A +G ++F F M R + N
Sbjct: 203 SMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNST 262
Query: 358 TFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSR----ARLFDESVI 413
T LLS H V+ +W + V ++ C+ + L R A E+ +
Sbjct: 263 TVSTLLSVLGH---VDHQKWGRGIHGLV--VKMGFDSVVCVCNTLLRMYAGAGRSVEANL 317
Query: 414 LIRSMPMEPDVYVWGALLG 432
+ + MP + D+ W +L+
Sbjct: 318 VFKQMPTK-DLISWNSLMA 335
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 132/246 (53%), Gaps = 7/246 (2%)
Query: 199 YLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITI 258
Y + G + A LF M +N +SWN++++G+V+ GL E +E F +M + +KP I
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 259 ASVLSACAQLGAI-DHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMP 317
AS+++AC + G++ G VH ++ ++G+ DV + TA++++YG GLV + ++FEEMP
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 318 EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRW 377
+++ +WT+++ ++ G + D + M GV N + ++S+C GL++
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESL 178
Query: 378 CFDVMKRVYL--IEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQ 435
++ +V +E ++ ++ +L D + + M E D W ++
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYA 237
Query: 436 MHGNVE 441
+G++E
Sbjct: 238 QNGHIE 243
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 155/363 (42%), Gaps = 39/363 (10%)
Query: 15 KNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNV 74
+N++S +I C L++ + + QI+ + + L S G+ YA +
Sbjct: 160 ENSMSLVISSCGLLKD-ESLGRQIIGQVVKSGLESKLAVENSLISM-LGSMGNVDYANYI 217
Query: 75 FHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCT 134
F ++ D +N + AYA + H + ++ M N T L+
Sbjct: 218 FDQMSERDTISWNSIAAAYA-----QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLG 272
Query: 135 RWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNS 194
G +H VVK GF S V N+L+ +Y G A +F ++P
Sbjct: 273 HVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT-------- 324
Query: 195 MVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPD 254
K++ISWNS++ V G + +AL L M +
Sbjct: 325 -----------------------KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVN 361
Query: 255 KITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFE 314
+T S L+AC + G+ +H + +G+ + +IG ALV+MYGK G + ++ +
Sbjct: 362 YVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLL 421
Query: 315 EMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSG-LVE 373
+MP +D AW A+I +A KA F M GV N++T V +LSAC G L+E
Sbjct: 422 QMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 481
Query: 374 QGR 376
+G+
Sbjct: 482 RGK 484
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 141/331 (42%), Gaps = 43/331 (12%)
Query: 7 IESKSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYG 66
+ S +T+ + LS + L K +H I+++ SD+ H+ L+ ++K G
Sbjct: 459 VSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG--FESDE-HVKNSLI--TMYAKCG 513
Query: 67 SFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTF 126
+ + ++F+ ++N ++ +N M+ A A H + L KM G+ + +F
Sbjct: 514 DLSSSQDLFNGLDNRNIITWNAMLAANA-----HHGHGEEVLKLVSKMRSFGVSLDQFSF 568
Query: 127 PFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPV 186
+ + G+ +H VK GF D F N+ ++Y CG + K+
Sbjct: 569 SEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVN 628
Query: 187 TDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEM 246
+ +WN + I+ L + G +E FHEM
Sbjct: 629 RSLPSWNIL-------------------------------ISALGRHGYFEEVCATFHEM 657
Query: 247 QQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRN-GIECDVVIGTALVNMYGKCGL 305
++ +KP +T S+L+AC+ G +D G + + R+ G+E + ++++ G+ G
Sbjct: 658 LEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGR 717
Query: 306 VQQAFEIFEEMPEKDTS-AWTAMISVFALHG 335
+ +A +MP K W ++++ +HG
Sbjct: 718 LAEAETFISKMPMKPNDLVWRSLLASCKIHG 748
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 3/144 (2%)
Query: 299 MYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVT 358
MY K G V+ A +F+ MP ++ +W M+S GL + + F +M G+KP+
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 359 FVGLLSACAHSG-LVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRS 417
L++AC SG + +G + + L+ VY ++ L L S +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLL-SDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 418 MPMEPDVYVWGALLGGCQMHGNVE 441
MP + +V W +L+ G G E
Sbjct: 120 MP-DRNVVSWTSLMVGYSDKGEPE 142
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 147/459 (32%), Positives = 242/459 (52%), Gaps = 45/459 (9%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGI-- 119
+SK G A VF I + L +N MI + V + +A+ + M I
Sbjct: 152 YSKCGRINEAEKVFRRIVDRSLISWNAMIAGF-----VHAGYGSKALDTFGMMQEANIKE 206
Query: 120 FPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGF--LSDVFNGNSLINLYMTCGLLSNA 177
P+ T L+K C+ +G+ +H +V+ GF S SL++LY+ CG L +A
Sbjct: 207 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266
Query: 178 RKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAK 237
RK FD+I K +ISW+S+I G Q G
Sbjct: 267 RKAFDQI-------------------------------KEKTMISWSSLILGYAQEGEFV 295
Query: 238 EALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRR--NGIECDVVIGTA 295
EA+ LF +Q+++ + D ++S++ A + GK + + + +G+E V+ +
Sbjct: 296 EAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL--NS 353
Query: 296 LVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPN 355
+V+MY KCGLV +A + F EM KD +WT +I+ + HGLG K+ F EM R ++P+
Sbjct: 354 VVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPD 413
Query: 356 HVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILI 415
V ++ +LSAC+HSG++++G F + + I+P+V HYAC+VDLL RA E+ LI
Sbjct: 414 EVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLI 473
Query: 416 RSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFD 475
+MP++P+V +W LL C++HG++ELG++V L+ ++ N A Y+ + ++YG+AG ++
Sbjct: 474 DTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWN 533
Query: 476 AAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSS 514
R L + ++K+ G S +EI V F +G S
Sbjct: 534 EQGNARELGNIKGLKKE-AGMSWVEIEREVHFFRSGEDS 571
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 180/416 (43%), Gaps = 76/416 (18%)
Query: 107 AMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLIN 166
++ L+ +M GI+PN TF +K C G +H +K GF V GNSL++
Sbjct: 91 SLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVD 150
Query: 167 LYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSI 226
+Y CG ++ A K+F I +++WN+M+ G++ G ALD F
Sbjct: 151 MYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTF-------------- 196
Query: 227 ITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGI 286
G+ +EA I +PD+ T+ S+L AC+ G I GK +H +L R+G
Sbjct: 197 -------GMMQEA--------NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF 241
Query: 287 EC--DVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCF 344
C I +LV++Y KCG + A + F+++ EK +W+++I +A G +A F
Sbjct: 242 HCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLF 301
Query: 345 LEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACM---VDL 401
++ + + ++ A L+ QG+ M+ + + P + + VD+
Sbjct: 302 KRLQELNSQIDSFALSSIIGVFADFALLRQGKQ----MQALAVKLPSGLETSVLNSVVDM 357
Query: 402 LSRARLFDESVILIRSMPM----------------------------------EPDVYVW 427
+ L DE+ M + EPD +
Sbjct: 358 YLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCY 417
Query: 428 GALLGGCQMHGNVELGEKVALHLID---LEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
A+L C G ++ GE++ L++ ++P Y + D+ G+AGR AK +
Sbjct: 418 LAVLSACSHSGMIKEGEELFSKLLETHGIKPRVE-HYACVVDLLGRAGRLKEAKHL 472
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 125/250 (50%), Gaps = 33/250 (13%)
Query: 129 LIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTD 188
+++ CTR G VH ++K G ++ N LI++Y C A K+FD +P +
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 189 VVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQ 248
VV+W++++ G++ NG L +L LF +M + I
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY--------------------------- 104
Query: 249 ISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQ 308
P++ T ++ L AC L A++ G +H + + G E V +G +LV+MY KCG + +
Sbjct: 105 ----PNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINE 160
Query: 309 AFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVK--PNHVTFVGLLSAC 366
A ++F + ++ +W AMI+ F G G KA D F M+ A +K P+ T LL AC
Sbjct: 161 AEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKAC 220
Query: 367 AHSGLVEQGR 376
+ +G++ G+
Sbjct: 221 SSTGMIYAGK 230
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 117/269 (43%), Gaps = 38/269 (14%)
Query: 257 TIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEM 316
+ S+L C + G D G VH YL ++G +++ L++MY KC A+++F+ M
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 317 PEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQG- 375
PE++ +W+A++S L+G + F EM R G+ PN TF L AC +E+G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 376 -------RWCFDVMKRVYLIEPQVYHYACMVDLLSRA--RLFDESVILIRSM-------- 418
+ F++M V +Y ++ + R+ D S+I +M
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 419 -----------------PMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLE---PHNH 458
PD + +LL C G + G+++ L+ P +
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 459 AFYMNLCDIYGKAGRFDAAKRIRNLLKER 487
+L D+Y K G +A++ + +KE+
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEK 276
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 228 bits (581), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 132/432 (30%), Positives = 223/432 (51%), Gaps = 39/432 (9%)
Query: 62 FSKYGSFTYATNVFHMINNP-DLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF 120
+ K+ + A +F I+ + +N M++ Y M + + + L++K+ GI
Sbjct: 376 YCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKM-----KCHVKCIELFRKIQNLGIE 430
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
+ + +I C+ G+ +H VVK + NSLI+LY G L+ A ++
Sbjct: 431 IDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRM 490
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
F E N+I+WN++I V +++A+
Sbjct: 491 FCEADT--------------------------------NVITWNAMIASYVHCEQSEKAI 518
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
LF M + KP IT+ ++L AC G+++ G+ +H Y+ E ++ + AL++MY
Sbjct: 519 ALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMY 578
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
KCG ++++ E+F+ +KD W MIS + +HG A F +ME + VKP TF+
Sbjct: 579 AKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFL 638
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
LLSAC H+GLVEQG+ F M + Y ++P + HY+C+VDLLSR+ +E+ + SMP
Sbjct: 639 ALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPF 697
Query: 421 EPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
PD +WG LL C HG E+G ++A + +P N +Y+ L ++Y AG+++ A+R
Sbjct: 698 SPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERA 757
Query: 481 RNLLKERRVQKK 492
R +++E V K+
Sbjct: 758 REMMRESGVGKR 769
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 120/502 (23%), Positives = 220/502 (43%), Gaps = 86/502 (17%)
Query: 21 LIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINN 80
L +Q +L L++ H ++ + L S+ + ++L+ S++ YG ++ VFH++
Sbjct: 33 LCDQSLSLESLRK-HNALIITGGL--SENIFVASKLI--SSYASYGKPNLSSRVFHLVTR 87
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGA 140
D+ ++N +I+A+ + + R++ + ML G P+ T P ++ C +
Sbjct: 88 RDIFLWNSIIKAH-----FSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFH 142
Query: 141 SGEIVHAQVVKFG-FLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGY 199
G VH V+K G F + G S + Y CG L +A +FDE
Sbjct: 143 VGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDE---------------- 186
Query: 200 LRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISV---KPDKI 256
M +++++W +II+G VQ G ++ L +M KP+
Sbjct: 187 ---------------MPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPR 231
Query: 257 TIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEM 316
T+ AC+ LGA+ G+ +H + +NG+ + +++ + Y K G +A+ F E+
Sbjct: 232 TLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFREL 291
Query: 317 PEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQG- 375
++D +WT++I+ A G ++FD F EM+ G+ P+ V L++ LV QG
Sbjct: 292 GDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGK 351
Query: 376 -------RWCFDVMKRVYLIEPQVYHYACMVDLLSRA-----RLFDE------SVIL--- 414
R CF + V +Y C +LLS A R+ +E + +L
Sbjct: 352 AFHGFVIRHCFSLDSTVCNSLLSMY---CKFELLSVAEKLFCRISEEGNKEAWNTMLKGY 408
Query: 415 ---------------IRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHA 459
I+++ +E D +++ C G V LG+ + +++
Sbjct: 409 GKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTI 468
Query: 460 FYMN-LCDIYGKAGRFDAAKRI 480
+N L D+YGK G A R+
Sbjct: 469 SVVNSLIDLYGKMGDLTVAWRM 490
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 200/458 (43%), Gaps = 84/458 (18%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+SK G+ + A F + + D+ + +I + A +++ + ++ +M G+ P
Sbjct: 275 YSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEE-----SFDMFWEMQNKGMHP 329
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ + LI + M G+ H V++ F D NSL+++Y LLS A KLF
Sbjct: 330 DGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLF 389
Query: 182 DEIPVT-DVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
I + WN+M+ GY + ++LFRK
Sbjct: 390 CRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRK-------------------------- 423
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
+Q + ++ D + SV+S+C+ +GA+ GK +H Y+ + ++ + + +L+++Y
Sbjct: 424 -----IQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLY 478
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
GK G + A+ +F E + + W AMI+ + KA F M KP+ +T V
Sbjct: 479 GKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLV 537
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQ----VYHYACMVDL------LSRAR-LFD 409
LL AC ++G +E+G+ M Y+ E + + A ++D+ L ++R LFD
Sbjct: 538 TLLMACVNTGSLERGQ-----MIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFD 592
Query: 410 -----------------------ESVILIRSMPMEPDVYVWG----ALLGGCQMHGNVEL 442
ES I + E DV G ALL C G VE
Sbjct: 593 AGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQ 652
Query: 443 GEKVAL--HLIDLEPHNHAFYMNLCDIYGKAGRFDAAK 478
G+K+ L H D++P N Y L D+ ++G + A+
Sbjct: 653 GKKLFLKMHQYDVKP-NLKHYSCLVDLLSRSGNLEEAE 689
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 145/322 (45%), Gaps = 34/322 (10%)
Query: 193 NSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVK 252
+SM Y ++G A FR++ +++ SW SII L + G +E+ ++F EMQ +
Sbjct: 269 SSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMH 328
Query: 253 PDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEI 312
PD + I+ +++ ++ + GK H ++ R+ D + +L++MY K L+ A ++
Sbjct: 329 PDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKL 388
Query: 313 FEEMPEK-DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGL 371
F + E+ + AW M+ + K + F +++ G++ + + ++S+C+H G
Sbjct: 389 FCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGA 448
Query: 372 VEQGR--WCFDVMKR----VYLIEPQVYHYACMVDLLSRARLF---DESVILIRSM---- 418
V G+ C+ V + ++ + Y M DL R+F D +VI +M
Sbjct: 449 VLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASY 508
Query: 419 -------------------PMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPH-NH 458
+P LL C G++E G+ + ++ + E N
Sbjct: 509 VHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNL 568
Query: 459 AFYMNLCDIYGKAGRFDAAKRI 480
+ L D+Y K G + ++ +
Sbjct: 569 SLSAALIDMYAKCGHLEKSREL 590
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 149/486 (30%), Positives = 249/486 (51%), Gaps = 29/486 (5%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ ++ + A +F + D +N +I YA + + A L+ KM G+
Sbjct: 189 YKRFRNMGIARRLFDRMFERDAVSWNAVINCYA-----SEGMWSEAFELFDKMWFSGVEV 243
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFN-GNSLINLYMTCGL----LSN 176
+ +T+ + GC + +G V A G +S + N SL + M GL L
Sbjct: 244 SVITWNIISGGCLQ-----TGNYVGA----LGLISRMRNFPTSLDPVAMIIGLKACSLIG 294
Query: 177 ARKLFDEIPVTDVVT--------WNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIIT 228
A +L EI + + N+++ Y + L +AL +FR+ ++ +WNSII+
Sbjct: 295 AIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIIS 354
Query: 229 GLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSY-LRRNGIE 287
G Q ++EA L EM +P+ IT+AS+L CA++ + HGK H Y LRR +
Sbjct: 355 GYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFK 414
Query: 288 CDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEM 347
++ +LV++Y K G + A ++ + M ++D +T++I + G G A F EM
Sbjct: 415 DYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEM 474
Query: 348 ERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARL 407
R+G+KP+HVT V +LSAC+HS LV +G F M+ Y I P + H++CMVDL RA
Sbjct: 475 TRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGF 534
Query: 408 FDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDI 467
++ +I +MP +P W LL C +HGN ++G+ A L++++P N +Y+ + ++
Sbjct: 535 LAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANM 594
Query: 468 YGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDR 527
Y AG + +R ++++ V KK PGC+ I+ + FS G +S + +LD
Sbjct: 595 YAAAGSWSKLAEVRTIMRDLGV-KKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDG 653
Query: 528 LCNEMK 533
L MK
Sbjct: 654 LNQLMK 659
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 136/521 (26%), Positives = 230/521 (44%), Gaps = 66/521 (12%)
Query: 9 SKSLTLKNALSRLIEQCKNLREL---KRIHTQILTSPNLHSSDQYH--LITRLLFSCSFS 63
S L L +A S L+ C ++R ++H ++S +YH L+ +L+ +
Sbjct: 38 SDDLVLHSAAS-LLSACVDVRAFLAGVQVHAHCISS-----GVEYHSVLVPKLV-----T 86
Query: 64 KYGSFTYATNVFHMINNPDLR---VYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF 120
Y +F +I N D+ +N++I +YA + F + YK+M+ GI
Sbjct: 87 FYSAFNLHNEAQSIIENSDILHPLPWNVLIASYA-----KNELFEEVIAAYKRMVSKGIR 141
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
P+ T+P ++K C +D A G +VH + + S ++ N+LI++Y + AR+L
Sbjct: 142 PDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRL 201
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKM--NG--KNIISWNSIITGLVQGGLA 236
FD + D V+WN+++ Y G A +LF KM +G ++I+WN I G +Q G
Sbjct: 202 FDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNY 261
Query: 237 KEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTAL 296
AL L M+ D + + L AC+ +GAI GK +H + + + L
Sbjct: 262 VGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTL 321
Query: 297 VNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNH 356
+ MY KC ++ A +F + E W ++IS +A +A EM AG +PN
Sbjct: 322 ITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNS 381
Query: 357 VTFVGLLSACAHSGLVEQG---------RWCF-------DVMKRVYLIEPQVYHYACMVD 400
+T +L CA ++ G R CF + + VY ++ + D
Sbjct: 382 ITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSD 441
Query: 401 LLSR------ARLFDE---------SVILIRSMP---MEPDVYVWGALLGGCQMHGNVEL 442
L+S+ L D ++ L + M ++PD A+L C V
Sbjct: 442 LMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHE 501
Query: 443 GEKVALHL---IDLEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
GE++ + + + P F + D+YG+AG AK I
Sbjct: 502 GERLFMKMQCEYGIRPCLQHFSC-MVDLYGRAGFLAKAKDI 541
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 138/451 (30%), Positives = 239/451 (52%), Gaps = 38/451 (8%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ K G A VF + ++ +N MI Y M D +L G+F
Sbjct: 91 YGKCGCVVSARKVFDEMPERNVATWNAMIGGY--MSNGD------------AVLASGLFE 136
Query: 122 ------NCLTFPFLIKGCTRWMDGASGEIVHAQVV--KFGF-LSDVFNGNSLINLYMTCG 172
N +T+ +IKG G EI A+ + + F L +V + ++ +Y+
Sbjct: 137 EISVCRNTVTWIEMIKGY-----GKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNR 191
Query: 173 LLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQ 232
+ +ARK F++IP + W+ M+ GY R G + A +F ++ ++++ WN++I G Q
Sbjct: 192 KMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQ 251
Query: 233 GGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVI 292
G + +A++ F MQ +PD +T++S+LSACAQ G +D G+ VHS + GIE + +
Sbjct: 252 NGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFV 311
Query: 293 GTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGV 352
AL++MY KCG ++ A +FE + + + +MIS A+HG G +A + F ME +
Sbjct: 312 SNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDL 371
Query: 353 KPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESV 412
KP+ +TF+ +L+AC H G + +G F MK ++P V H+ C++ LL R+ E+
Sbjct: 372 KPDEITFIAVLTACVHGGFLMEGLKIFSEMK-TQDVKPNVKHFGCLIHLLGRSGKLKEAY 430
Query: 413 ILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKV------ALHLIDLEPHNHAFYMNLCD 466
L++ M ++P+ V GALLG C++H + E+ E+V A + + NH ++ +
Sbjct: 431 RLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENH--LASISN 488
Query: 467 IYGKAGRFDAAKRIRNLLKERRVQKKIPGCS 497
+Y R+ A+ +R +++R ++K PG S
Sbjct: 489 LYAHTERWQTAEALRVEMEKRGLEKS-PGLS 518
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 201/425 (47%), Gaps = 54/425 (12%)
Query: 106 RAMVLYKKMLCDGI-FPNCLTFPFLIKGCTRWMDGAS-GEIVHAQVVKFGFLSDVFNGNS 163
+A+VLY + G+ FP + P +++ C + G+++H++ +KFG SDV G+S
Sbjct: 29 QALVLYGGIRRRGVYFPGWV--PLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSS 86
Query: 164 LINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMN-GKNIIS 222
LI++Y CG + +ARK+FDE+P +V TWN+M+ GY+ NG A LF +++ +N ++
Sbjct: 87 LISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVT 146
Query: 223 WNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLR 282
W +I G + ++A ELF M + +V + LG + + + +
Sbjct: 147 WIEMIKGYGKRIEIEKARELFERM--------PFELKNVKAWSVMLGVYVNNRKMEDARK 198
Query: 283 --RNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKA 340
+ E + + + +++ Y + G V +A IF + +D W +I+ +A +G A
Sbjct: 199 FFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDA 258
Query: 341 FDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRW----------------------- 377
D F M+ G +P+ VT +LSACA SG ++ GR
Sbjct: 259 IDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDM 318
Query: 378 ---CFDVMKRVYLIEP-QVYHYACMVDLLS------RARLFDESVILIRSMPMEPDVYVW 427
C D+ + E V AC ++S + + E + S+ ++PD +
Sbjct: 319 YAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITF 378
Query: 428 GALLGGCQMHGNVELGEKV--ALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLK 485
A+L C G + G K+ + D++P N + L + G++G+ A R L+K
Sbjct: 379 IAVLTACVHGGFLMEGLKIFSEMKTQDVKP-NVKHFGCLIHLLGRSGKLKEAYR---LVK 434
Query: 486 ERRVQ 490
E V+
Sbjct: 435 EMHVK 439
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 136/309 (44%), Gaps = 17/309 (5%)
Query: 57 LFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLC 116
L + + G A +F+ + DL ++N +I YA DD A+ + M
Sbjct: 213 LMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDD-----AIDAFFNMQG 267
Query: 117 DGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSN 176
+G P+ +T ++ C + G VH+ + G + F N+LI++Y CG L N
Sbjct: 268 EGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLEN 327
Query: 177 ARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNI----ISWNSIITGLVQ 232
A +F+ I V V NSM+ +G AL++F M ++ I++ +++T V
Sbjct: 328 ATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVH 387
Query: 233 GGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWV--HSYLRRNGIECDV 290
GG E L++F EM+ VKP+ ++ + G + + +++ N
Sbjct: 388 GGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGA 447
Query: 291 VIGTALVNMYGKCGLVQQAFEIFE---EMPEKDTSAWTAMISVFALHGLGWKAFDCF-LE 346
++G V+M + +Q +I E + + A IS H W+ + +E
Sbjct: 448 LLGACKVHM--DTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVE 505
Query: 347 MERAGVKPN 355
ME+ G++ +
Sbjct: 506 MEKRGLEKS 514
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/401 (31%), Positives = 212/401 (52%), Gaps = 43/401 (10%)
Query: 120 FPNCLTFPFLIK-GCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNAR 178
F + + F IK + G +HA V K GF + + SL+ Y + G + AR
Sbjct: 61 FVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYAR 120
Query: 179 KLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKE 238
++FDE P +NI+ W ++I+ + + E
Sbjct: 121 QVFDETP------------------------------EKQNIVLWTAMISAYTENENSVE 150
Query: 239 ALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSY--LRRNGIECDVVIGTAL 296
A+ELF M+ ++ D + + LSACA LGA+ G+ ++S R+ + D+ + +L
Sbjct: 151 AIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSL 210
Query: 297 VNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEM------ERA 350
+NMY K G ++A ++F+E KD + +T+MI +AL+G ++ + F +M +
Sbjct: 211 LNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDT 270
Query: 351 GVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDE 410
+ PN VTF+G+L AC+HSGLVE+G+ F M Y ++P+ H+ CMVDL R+ +
Sbjct: 271 VITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKD 330
Query: 411 SVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGK 470
+ I MP++P+ +W LLG C +HGNVELGE+V + +L+ + Y+ L +IY
Sbjct: 331 AHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYAS 390
Query: 471 AGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAG 511
G +D ++R+ +++RR +PG S IE+ ++ EF +G
Sbjct: 391 KGMWDEKSKMRDRVRKRR----MPGKSWIELGSIINEFVSG 427
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 145/332 (43%), Gaps = 44/332 (13%)
Query: 62 FSKYGSFTYATNVF-HMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF 120
+S G YA VF ++ ++ MI AY ++ + A+ L+K+M + I
Sbjct: 110 YSSVGDVDYARQVFDETPEKQNIVLWTAMISAY-----TENENSVEAIELFKRMEAEKIE 164
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFG--FLSDVFNGNSLINLYMTCGLLSNAR 178
+ + + C GE ++++ +K D+ NSL+N+Y+ G AR
Sbjct: 165 LDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKAR 224
Query: 179 KLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKE 238
KLFDE DV T+ SM+ GY NG +L+LF+KM
Sbjct: 225 KLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKM----------------------- 261
Query: 239 ALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGK-WVHSYLRRNGIECDVVIGTALV 297
+ + Q + P+ +T VL AC+ G ++ GK S + ++ +V
Sbjct: 262 --KTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMV 319
Query: 298 NMYGKCGLVQQAFEIFEEMPEK-DTSAWTAMISVFALHG---LGWKAFDCFLEMERAGVK 353
+++ + G ++ A E +MP K +T W ++ +LHG LG + E++R
Sbjct: 320 DLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDR---- 375
Query: 354 PNHV-TFVGLLSACAHSGLVEQGRWCFDVMKR 384
+HV +V L + A G+ ++ D +++
Sbjct: 376 -DHVGDYVALSNIYASKGMWDEKSKMRDRVRK 406
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 121/258 (46%), Gaps = 21/258 (8%)
Query: 196 VIGYLRNGGLDNALDLFR-KMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPD 254
++ +L + G+ N D F + K++ S +++ L G K L+ H +Q D
Sbjct: 4 ILRHLHSLGVINKFDSFLLHFHTKSLKSNHTLKQYLESGEPIKALLDFRHRFRQSPSFVD 63
Query: 255 KITI--ASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEI 312
++ A +S+ + ++D G+ +H+ +R+ G + I T+LV Y G V A ++
Sbjct: 64 SFSVLFAIKVSSAQKASSLD-GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQV 122
Query: 313 FEEMPEKDTSA-WTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGL 371
F+E PEK WTAMIS + + +A + F ME ++ + V LSACA G
Sbjct: 123 FDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGA 182
Query: 372 VEQGRWCFD-VMKRVYLIEPQVYHYACMVDLLSRA-------RLFDESVILIRSMPMEPD 423
V+ G + +KR + + ++++ ++ +LFDES M D
Sbjct: 183 VQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDES--------MRKD 234
Query: 424 VYVWGALLGGCQMHGNVE 441
V + +++ G ++G +
Sbjct: 235 VTTYTSMIFGYALNGQAQ 252
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 236/462 (51%), Gaps = 39/462 (8%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ K+G A V + D+ + +I Y+ G D A+ ++ ML + + P
Sbjct: 211 YVKFGKTREAKLVLDRVEEKDVVLITALIVGYS-QKGED----TEAVKAFQSMLVEKVQP 265
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
N T+ ++ C D +G+++H +VK GF S + + SL+ +Y+ C L+
Sbjct: 266 NEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLV------- 318
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
D++L +F+ + N +SW S+I+GLVQ G + AL
Sbjct: 319 ------------------------DDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALI 354
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
F +M + S+KP+ T++S L C+ L + G+ +H + + G + D G+ L+++YG
Sbjct: 355 EFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYG 414
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KCG A +F+ + E D + MI +A +G G +A D F M G++PN VT +
Sbjct: 415 KCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLS 474
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME 421
+L AC +S LVE+G FD ++ ++ HYACMVDLL RA +E+ +L + +
Sbjct: 475 VLLACNNSRLVEEGCELFDSFRKDKIMLTN-DHYACMVDLLGRAGRLEEAEMLTTEV-IN 532
Query: 422 PDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIR 481
PD+ +W LL C++H VE+ E++ ++++EP + + + ++Y G+++ ++
Sbjct: 533 PDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMK 592
Query: 482 NLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVL 523
+ +K+ ++ KK P S +EIN F AG P + +L
Sbjct: 593 SKMKDMKL-KKNPAMSWVEINKETHTFMAGDLFSHPNSEQIL 633
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 177/399 (44%), Gaps = 41/399 (10%)
Query: 7 IESKSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYG 66
I +LT + S+L+ QC + R + I T + + L S + L S K G
Sbjct: 57 ITCDTLTTTHNFSQLLRQCIDERSISGIKT--IQAHMLKSGFPAEISGSKLVDASL-KCG 113
Query: 67 SFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTF 126
YA VF ++ + +N +I AY + R A+ +Y+ M+ + + P+ T
Sbjct: 114 DIDYARQVFDGMSERHIVTWNSLI-AYL----IKHRRSKEAVEMYRLMITNNVLPDEYTL 168
Query: 127 PFLIKGCTRWMDGASGEIVHAQVVKFGF-LSDVFNGNSLINLYMTCGLLSNARKLFDEIP 185
+ K + + H V G +S+VF G++L+++Y+ G A+ + D +
Sbjct: 169 SSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVE 228
Query: 186 VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHE 245
DVV ++++GY Q G EA++ F
Sbjct: 229 EKDVVLITALIVGY-------------------------------SQKGEDTEAVKAFQS 257
Query: 246 MQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGL 305
M V+P++ T ASVL +C L I +GK +H + ++G E + T+L+ MY +C L
Sbjct: 258 MLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSL 317
Query: 306 VQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSA 365
V + +F+ + + +WT++IS +G A F +M R +KPN T L
Sbjct: 318 VDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRG 377
Query: 366 CAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSR 404
C++ + E+GR ++ + Y + Y + ++DL +
Sbjct: 378 CSNLAMFEEGRQIHGIVTK-YGFDRDKYAGSGLIDLYGK 415
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 130/255 (50%), Gaps = 3/255 (1%)
Query: 190 VTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQI 249
++ + +V L+ G +D A +F M+ ++I++WNS+I L++ +KEA+E++ M
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 250 SVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIE-CDVVIGTALVNMYGKCGLVQQ 308
+V PD+ T++SV A + L + H G+E +V +G+ALV+MY K G ++
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTRE 219
Query: 309 AFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAH 368
A + + + EKD TA+I ++ G +A F M V+PN T+ +L +C +
Sbjct: 220 AKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGN 279
Query: 369 SGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWG 428
+ G+ +M + E + ++ + R L D+S+ + + + P+ W
Sbjct: 280 LKDIGNGKLIHGLMVKSGF-ESALASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWT 337
Query: 429 ALLGGCQMHGNVELG 443
+L+ G +G E+
Sbjct: 338 SLISGLVQNGREEMA 352
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 148/494 (29%), Positives = 245/494 (49%), Gaps = 45/494 (9%)
Query: 21 LIEQC---KNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHM 77
L+E C K++R +KR++ +++ N +QY ++ R+L K G A +F
Sbjct: 129 LVEACIRLKSIRCVKRVYGFMMS--NGFEPEQY-MMNRILLM--HVKCGMIIDARRLFDE 183
Query: 78 INNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWM 137
I +L Y +I + V+ ++ A L+K M + TF +++
Sbjct: 184 IPERNLYSYYSIISGF-----VNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLG 238
Query: 138 DGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVI 197
G+ +H +K G + + F LI++Y CG + +AR F+ +P
Sbjct: 239 SIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMP------------ 286
Query: 198 GYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKIT 257
K ++WN++I G G ++EAL L ++M+ V D+ T
Sbjct: 287 -------------------EKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFT 327
Query: 258 IASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMP 317
++ ++ +L ++ K H+ L RNG E ++V TALV+ Y K G V A +F+++P
Sbjct: 328 LSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLP 387
Query: 318 EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRW 377
K+ +W A++ +A HG G A F +M A V PNHVTF+ +LSACA+SGL EQG
Sbjct: 388 RKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWE 447
Query: 378 CFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMH 437
F M V+ I+P+ HYACM++LL R L DE++ IR P++ V +W ALL C+M
Sbjct: 448 IFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQ 507
Query: 438 GNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCS 497
N+ELG VA L + P Y+ + ++Y G+ A + L+ + + +P C+
Sbjct: 508 ENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLS-MMPACT 566
Query: 498 MIEINGVVQEFSAG 511
+E+ F +G
Sbjct: 567 WVEVGDQTHSFLSG 580
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 150/337 (44%), Gaps = 59/337 (17%)
Query: 125 TFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEI 184
T+ L++ C R + V+ ++ GF + + N ++ +++ CG++ +AR+LFDEI
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 185 PVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFH 244
P ++ ++ S++ G++ G A +LF+ M W +
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMM-------WEEL------------------ 219
Query: 245 EMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCG 304
+ T A +L A A LG+I GK +H + G+ + + L++MY KCG
Sbjct: 220 ------SDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCG 273
Query: 305 LVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGL-- 362
++ A FE MPEK T AW +I+ +ALHG +A +M +GV + T +
Sbjct: 274 DIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIR 333
Query: 363 ---------LSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVI 413
L+ AH+ L+ G E ++ +VD S+ D +
Sbjct: 334 ISTKLAKLELTKQAHASLIRNG------------FESEIVANTALVDFYSKWGRVDTARY 381
Query: 414 LIRSMPMEPDVYVWGALLGGCQMHGN----VELGEKV 446
+ +P ++ W AL+GG HG V+L EK+
Sbjct: 382 VFDKLP-RKNIISWNALMGGYANHGRGTDAVKLFEKM 417
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 108/225 (48%), Gaps = 3/225 (1%)
Query: 218 KNIISWNSIITGLVQGGLAKEALELFHEMQ-QISVKPDKITIASVLSACAQLGAIDHGKW 276
K+ ++ S I LV +EA ELF ++ + S K T +++ AC +L +I K
Sbjct: 85 KSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKR 144
Query: 277 VHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGL 336
V+ ++ NG E + + ++ M+ KCG++ A +F+E+PE++ ++ ++IS F G
Sbjct: 145 VYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGN 204
Query: 337 GWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYA 396
+AF+ F M TF +L A A G + G+ ++ +++ +
Sbjct: 205 YVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVD-NTFVSC 263
Query: 397 CMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVE 441
++D+ S+ +++ MP E W ++ G +HG E
Sbjct: 264 GLIDMYSKCGDIEDARCAFECMP-EKTTVAWNNVIAGYALHGYSE 307
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 140/489 (28%), Positives = 245/489 (50%), Gaps = 66/489 (13%)
Query: 18 LSRLIEQCKNLRELKR---IHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATN- 73
LS ++ C L E++ H ++T H + H I+ L ++ Y N
Sbjct: 166 LSSAVKACSELGEVRLGRCFHGVVIT----HGFEWNHFISSTL---------AYLYGVNR 212
Query: 74 -------VFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKM-LCDGIFPNCLT 125
VF + PD+ + ++ A++ D ++ A+ L+ M G+ P+ T
Sbjct: 213 EPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEE-----ALGLFYAMHRGKGLVPDGST 267
Query: 126 FPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP 185
F ++ C G+ +H +++ G S+V +SL+++Y CG + AR++
Sbjct: 268 FGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQV----- 322
Query: 186 VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHE 245
F M+ KN +SW++++ G Q G ++A+E+F E
Sbjct: 323 --------------------------FNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFRE 356
Query: 246 MQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGL 305
M++ D +VL ACA L A+ GK +H R G +V++ +AL+++YGK G
Sbjct: 357 MEE----KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGC 412
Query: 306 VQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSA 365
+ A ++ +M ++ W AM+S A +G G +A F +M + G+KP++++F+ +L+A
Sbjct: 413 IDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTA 472
Query: 366 CAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVY 425
C H+G+V++GR F +M + Y I+P HY+CM+DLL RA LF+E+ L+ D
Sbjct: 473 CGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDAS 532
Query: 426 VWGALLGGCQMHGNV-ELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLL 484
+WG LLG C + + + E++A +++LEP H Y+ L ++Y GR A IR L+
Sbjct: 533 LWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLM 592
Query: 485 KERRVQKKI 493
R V K +
Sbjct: 593 VRRGVAKTV 601
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 136/548 (24%), Positives = 230/548 (41%), Gaps = 117/548 (21%)
Query: 6 LIESKSLTLKNALSRLIEQCK--NLRELKRI-----HTQILTSPNLHSSDQYHLITRLLF 58
L S S + SR++E CK L E RI ++I +P L++S LL
Sbjct: 18 LTPSISSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPKLYAS--------LLQ 69
Query: 59 SCS--FSKYGSFTYATNVFHMINNPDLRVYNIMIRAY----AGM-------DG------- 98
+C+ FS + +V D V N ++ Y GM DG
Sbjct: 70 TCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAI 129
Query: 99 ---------VDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQV 149
V + +A+ ++ +M+ G+ N T +K C+ + G H V
Sbjct: 130 SWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVV 189
Query: 150 VKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNAL 209
+ GF + F ++L LY +AR++FDE+P DV+ W +++ + +N + AL
Sbjct: 190 ITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEAL 249
Query: 210 DLFRKMN-GKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQL 268
LF M+ GK ++ PD T +VL+AC L
Sbjct: 250 GLFYAMHRGKGLV-------------------------------PDGSTFGTVLTACGNL 278
Query: 269 GAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMI 328
+ GK +H L NGI +VV+ ++L++MYGKCG V++A ++F M +K++ +W+A++
Sbjct: 279 RRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALL 338
Query: 329 SVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACA-----------HSGLVEQG-- 375
+ +G KA + F EME + + F +L ACA H V +G
Sbjct: 339 GGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCF 394
Query: 376 ---------------RWCFDVMKRVY--LIEPQVYHYACMVDLLSRARLFDESVILIRSM 418
C D RVY + + + M+ L++ +E+V M
Sbjct: 395 GNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDM 454
Query: 419 ---PMEPDVYVWGALLGGCQMHGNVELGEKVALHLID---LEPHNHAFYMNLCDIYGKAG 472
++PD + A+L C G V+ G + + ++P Y + D+ G+AG
Sbjct: 455 VKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTE-HYSCMIDLLGRAG 513
Query: 473 RFDAAKRI 480
F+ A+ +
Sbjct: 514 LFEEAENL 521
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 185/423 (43%), Gaps = 74/423 (17%)
Query: 126 FPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGL-LSNARKLFDEI 184
+ L++ C + G HA VVK G +D GNSL++LY G + R++FD
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGR 123
Query: 185 PVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFH 244
V D ISW S+++G V G +ALE+F
Sbjct: 124 FVKDA-------------------------------ISWTSMMSGYVTGKEHVKALEVFV 152
Query: 245 EMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCG 304
EM + ++ T++S + AC++LG + G+ H + +G E + I + L +YG
Sbjct: 153 EMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNR 212
Query: 305 LVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERA-GVKPNHVTFVGLL 363
A +F+EMPE D WTA++S F+ + L +A F M R G+ P+ TF +L
Sbjct: 213 EPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVL 272
Query: 364 SACAHSGLVEQGRWCF----------DVMKRVYLIE-----------PQVYHYACMVDLL 402
+AC + ++QG+ +V+ L++ QV++ + +
Sbjct: 273 TACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSV 332
Query: 403 SRARLF---------DESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDL 453
S + L ++++ + R M E D+Y +G +L C V LG+++ +
Sbjct: 333 SWSALLGGYCQNGEHEKAIEIFREME-EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRR 391
Query: 454 EPHNHAFYMN-LCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGG 512
+ + L D+YGK+G D+A R+ + + R +MI N ++ + G
Sbjct: 392 GCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR---------NMITWNAMLSALAQNG 442
Query: 513 SSE 515
E
Sbjct: 443 RGE 445
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 139/455 (30%), Positives = 224/455 (49%), Gaps = 44/455 (9%)
Query: 51 HLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVL 110
+LI R +++ G A F + DL +N MI Y + D F L
Sbjct: 147 NLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTA-NACADTSFS----L 201
Query: 111 YKKMLCDGIFPNCLTFPFLIKGC--TRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLY 168
++ ML +G P+C TF L++ + ++ S +H +K GF SL+N Y
Sbjct: 202 FQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSE--LHGLAIKLGFGRSSALIRSLVNAY 259
Query: 169 MTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIIT 228
+ CG L+ NA L ++++S ++IT
Sbjct: 260 VKCGSLA-------------------------------NAWKLHEGTKKRDLLSCTALIT 288
Query: 229 GLVQ-GGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSY-LRRNGI 286
G Q +A ++F +M ++ K D++ ++S+L C + ++ G+ +H + L+ + I
Sbjct: 289 GFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQI 348
Query: 287 ECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLE 346
DV +G +L++MY K G ++ A FEEM EKD +WT++I+ + HG KA D +
Sbjct: 349 RFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNR 408
Query: 347 MERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRAR 406
ME +KPN VTF+ LLSAC+H+G E G +D M + IE + H +C++D+L+R+
Sbjct: 409 MEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSG 468
Query: 407 LFDESVILIRSMP--MEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNL 464
+E+ LIRS + WGA L C+ HGNV+L + A L+ +EP Y+NL
Sbjct: 469 YLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINL 528
Query: 465 CDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMI 499
+Y G +D A R L+KE K PG S++
Sbjct: 529 ASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 31/222 (13%)
Query: 144 IVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNG 203
++H + GF S++ + LI+LY+ G + +ARKLFD I DVV+W +M+ + R G
Sbjct: 33 LIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCG 92
Query: 204 GLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLS 263
+AL LF+ EM + VK ++ T SVL
Sbjct: 93 YHPDALLLFK-------------------------------EMHREDVKANQFTYGSVLK 121
Query: 264 ACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSA 323
+C LG + G +H + + ++++ +AL+++Y +CG +++A F+ M E+D +
Sbjct: 122 SCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVS 181
Query: 324 WTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSA 365
W AMI + + +F F M G KP+ TF LL A
Sbjct: 182 WNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 157/381 (41%), Gaps = 38/381 (9%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ K G +A +F I+ D+ + MI ++ D A++L+K+M + +
Sbjct: 57 YLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPD-----ALLLFKEMHREDVKA 111
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
N T+ ++K C G +H V K ++ ++L++LY CG + AR F
Sbjct: 112 NQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQF 171
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
D M ++++SWN++I G A +
Sbjct: 172 DS-------------------------------MKERDLVSWNAMIDGYTANACADTSFS 200
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
LF M KPD T S+L A + ++ +H + G + +LVN Y
Sbjct: 201 LFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYV 260
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALH-GLGWKAFDCFLEMERAGVKPNHVTFV 360
KCG + A+++ E ++D + TA+I+ F+ AFD F +M R K + V
Sbjct: 261 KCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVS 320
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
+L C V GR + I V ++D+ +++ +++V+ M
Sbjct: 321 SMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK- 379
Query: 421 EPDVYVWGALLGGCQMHGNVE 441
E DV W +L+ G HGN E
Sbjct: 380 EKDVRSWTSLIAGYGRHGNFE 400
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 2/157 (1%)
Query: 277 VHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGL 336
+H NG ++ + L+++Y K G V+ A ++F+ + ++D +WTAMIS F+ G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 337 GWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYA 396
A F EM R VK N T+ +L +C G +++G +++ + A
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA 153
Query: 397 CMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGG 433
++ L +R +E+ + SM E D+ W A++ G
Sbjct: 154 -LLSLYARCGKMEEARLQFDSMK-ERDLVSWNAMIDG 188
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 149/525 (28%), Positives = 246/525 (46%), Gaps = 53/525 (10%)
Query: 9 SKSLTLKNALSRLIEQCKNLRELK---RIHTQILTSPNLHSSDQYHLITRLLFSCS---- 61
S+ L+ + ++ C LR++K IHT ++ +T L + S
Sbjct: 203 SEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRG---------FVTTLCVANSLATM 253
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+++ G +F ++ D+ + +I AY + +A+ + KM + P
Sbjct: 254 YTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIG-----QEVKAVETFIKMRNSQVPP 308
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
N TF + C GE +H V+ G + NS++ +Y TCG L +A L
Sbjct: 309 NEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVL- 367
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
F+ M ++IISW++II G Q G +E +
Sbjct: 368 ------------------------------FQGMRCRDIISWSTIIGGYCQAGFGEEGFK 397
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
F M+Q KP +AS+LS + I+ G+ VH+ G+E + + ++L+NMY
Sbjct: 398 YFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYS 457
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KCG +++A IF E D + TAMI+ +A HG +A D F + + G +P+ VTF+
Sbjct: 458 KCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFIS 517
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME 421
+L+AC HSG ++ G F++M+ Y + P HY CMVDLL RA ++ +I M +
Sbjct: 518 VLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWK 577
Query: 422 PDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIR 481
D VW LL C+ G++E G + A +++L+P + L +IY G + A +R
Sbjct: 578 KDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVR 637
Query: 482 NLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILD 526
+K + V K+ PG S I+I V F +G +D+ IL+
Sbjct: 638 KNMKAKGVIKE-PGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 144/304 (47%), Gaps = 38/304 (12%)
Query: 66 GSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKM--LCDGIFPNC 123
G+ A VF + + D+ + +I+ Y + D+ A++L+ M + + P+
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDE-----ALILFSAMRVVDHAVSPDT 108
Query: 124 LTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDE 183
++K C + + A GE +HA VK LS V+ G+SL+++Y
Sbjct: 109 SVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYK-------------- 154
Query: 184 IPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELF 243
R G +D + +F +M +N ++W +IITGLV G KE L F
Sbjct: 155 -----------------RVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYF 197
Query: 244 HEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKC 303
EM + D T A L ACA L + +GK +H+++ G + + +L MY +C
Sbjct: 198 SEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTEC 257
Query: 304 GLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLL 363
G +Q +FE M E+D +WT++I + G KA + F++M + V PN TF +
Sbjct: 258 GEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMF 317
Query: 364 SACA 367
SACA
Sbjct: 318 SACA 321
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 2/186 (1%)
Query: 193 NSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQI--S 250
NS + + G L A +F KM +I+SW SII V + EAL LF M+ + +
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 251 VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAF 310
V PD ++ VL AC Q I +G+ +H+Y + + V +G++L++MY + G + ++
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 311 EIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSG 370
+F EMP ++ WTA+I+ G + F EM R+ + TF L ACA
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 371 LVEQGR 376
V+ G+
Sbjct: 224 QVKYGK 229
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 135/428 (31%), Positives = 218/428 (50%), Gaps = 39/428 (9%)
Query: 62 FSKYGSFTYATNVFH---MINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDG 118
+S GS YA +VFH + N + V+N M+ + ++ ++ + +Y+ LC
Sbjct: 283 YSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFL-INEENEAALWLLLQIYQSDLC-- 339
Query: 119 IFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNAR 178
+ T +K C +++ G VH+ VV G+ D G+ L++L+ G + +A
Sbjct: 340 --FDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAH 397
Query: 179 KLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKE 238
KLF +P K+II+++ +I G V+ G
Sbjct: 398 KLFHRLP-------------------------------NKDIIAFSGLIRGCVKSGFNSL 426
Query: 239 ALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVN 298
A LF E+ ++ + D+ ++++L C+ L ++ GK +H + G E + V TALV+
Sbjct: 427 AFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVD 486
Query: 299 MYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVT 358
MY KCG + +F+ M E+D +WT +I F +G +AF F +M G++PN VT
Sbjct: 487 MYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVT 546
Query: 359 FVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSM 418
F+GLLSAC HSGL+E+ R + MK Y +EP + HY C+VDLL +A LF E+ LI M
Sbjct: 547 FLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKM 606
Query: 419 PMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAK 478
P+EPD +W +LL C H N L +A L+ P + + Y +L + Y G +D
Sbjct: 607 PLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLS 666
Query: 479 RIRNLLKE 486
++R K+
Sbjct: 667 KVREAAKK 674
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 146/300 (48%), Gaps = 10/300 (3%)
Query: 71 ATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKML-CDGIFPNCLTFPFL 129
A VF ++ ++ + M+ Y DG ++ A+ LY++ML + N + +
Sbjct: 59 AHKVFDEMSERNIVTWTTMVSGYTS-DGKPNK----AIELYRRMLDSEEEAANEFMYSAV 113
Query: 130 IKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDV 189
+K C D G +V+ ++ K DV NS++++Y+ G L A F EI
Sbjct: 114 LKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSS 173
Query: 190 VTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQI 249
+WN+++ GY + G +D A+ LF +M N++SWN +I+G V G + ALE MQ+
Sbjct: 174 TSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQRE 232
Query: 250 SVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQA 309
+ D + L AC+ G + GK +H + ++G+E +AL++MY CG + A
Sbjct: 233 GLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYA 292
Query: 310 FEIFEEMP---EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSAC 366
++F + + W +M+S F ++ A L++ ++ + + T G L C
Sbjct: 293 ADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKIC 352
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 183/429 (42%), Gaps = 41/429 (9%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ K G A +FH + P++ +N +I + D+ RA+ +M +G+
Sbjct: 183 YCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFV------DKGSPRALEFLVRMQREGLVL 236
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ P +K C+ G+ +H VVK G S F ++LI++Y CG L A +F
Sbjct: 237 DGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVF 296
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
+ + + NS ++ WNS+++G + + AL
Sbjct: 297 HQ----EKLAVNS------------------------SVAVWNSMLSGFLINEENEAALW 328
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
L ++ Q + D T++ L C + G VHS + +G E D ++G+ LV+++
Sbjct: 329 LLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHA 388
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
G +Q A ++F +P KD A++ +I G AF F E+ + G+ +
Sbjct: 389 NVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSN 448
Query: 362 LLSACAHSGLVEQGRWCFDV-MKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
+L C+ + G+ + +K+ Y EP +VD+ + D V+L M +
Sbjct: 449 ILKVCSSLASLGWGKQIHGLCIKKGYESEPVT--ATALVDMYVKCGEIDNGVVLFDGM-L 505
Query: 421 EPDVYVWGALLGGCQMHGNVELGEKVALHLID--LEPHNHAFYMNLCDIYGKAGRFDAAK 478
E DV W ++ G +G VE + +I+ +EP N ++ L +G + A+
Sbjct: 506 ERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEP-NKVTFLGLLSACRHSGLLEEAR 564
Query: 479 RIRNLLKER 487
+K
Sbjct: 565 STLETMKSE 573
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 151/312 (48%), Gaps = 15/312 (4%)
Query: 130 IKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDV 189
++ C + GE + A V+K G +VF N++I++Y+ LLS+A K+FDE+ ++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 190 VTWNSMVIGYLRNGGLDNALDLFRKM-----NGKNIISWNSIITGLVQGGLAKEALELFH 244
VTW +MV GY +G + A++L+R+M N +++++ G + + ++
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 245 EMQQISVKPDKITIASVLSACAQLGA-IDHGKWVHSYLRRNGIECDVVIGTALVNMYGKC 303
+ + +++ D + + SV+ + G I+ LR + + L++ Y K
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWN-----TLISGYCKA 186
Query: 304 GLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLL 363
GL+ +A +F MP+ + +W +IS F G +A + + M+R G+ + L
Sbjct: 187 GLMDEAVTLFHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCGL 245
Query: 364 SACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSR--ARLFDESVILIRSMPME 421
AC+ GL+ G+ + + L E + + ++D+ S + ++ V + +
Sbjct: 246 KACSFGGLLTMGKQLHCCVVKSGL-ESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVN 304
Query: 422 PDVYVWGALLGG 433
V VW ++L G
Sbjct: 305 SSVAVWNSMLSG 316
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 32/207 (15%)
Query: 258 IASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMP 317
IA+ L C ++ A G+ + +++ + GI +V I +++MY L+ A ++F+EM
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS 67
Query: 318 EKDTSAWTAMISVFALHGLGWKAFDCFLEM-ERAGVKPNHVTFVGLLSACAHSGLVEQGR 376
E++ WT M+S + G KA + + M + N + +L AC G ++ G
Sbjct: 68 ERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGI 127
Query: 377 WCFD--------------------VMKRVYLIE----------PQVYHYACMVDLLSRAR 406
++ +K LIE P + ++ +A
Sbjct: 128 LVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAG 187
Query: 407 LFDESVILIRSMPMEPDVYVWGALLGG 433
L DE+V L MP +P+V W L+ G
Sbjct: 188 LMDEAVTLFHRMP-QPNVVSWNCLISG 213
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 144/451 (31%), Positives = 226/451 (50%), Gaps = 38/451 (8%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ ++G A +F + ++ + MI G+D + A+ L+K ML I
Sbjct: 169 YLQFGKVDDALKLFKQMPGKNVISWTTMI---CGLD--QNERSGEALDLFKNMLRCCIKS 223
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
F +I C G VH ++K GFL + + SLI Y C + ++RK+F
Sbjct: 224 TSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVF 283
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
DE V W +++ GY +N K+ ++AL
Sbjct: 284 DEKVHEQVAVWTALLSGY--------------SLNKKH-----------------EDALS 312
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
+F M + S+ P++ T AS L++C+ LG +D GK +H + G+E D +G +LV MY
Sbjct: 313 IFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYS 372
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
G V A +F ++ +K +W ++I A HG G AF F +M R +P+ +TF G
Sbjct: 373 DSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTG 432
Query: 362 LLSACAHSGLVEQGRWCFDVMKR-VYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
LLSAC+H G +E+GR F M + I+ ++ HY CMVD+L R E+ LI M +
Sbjct: 433 LLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVV 492
Query: 421 EPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
+P+ VW ALL C+MH +V+ GEK A + +L+ + A Y+ L +IY AGR+ ++
Sbjct: 493 KPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKL 552
Query: 481 RNLLKERRVQKKIPGCSMIEINGVVQEFSAG 511
R +K+ + KK PG S + I G EF +G
Sbjct: 553 RVKMKKNGIMKK-PGSSWVVIRGKKHEFFSG 582
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 182/368 (49%), Gaps = 15/368 (4%)
Query: 71 ATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLI 130
A VF+ + +P + +Y MI Y + + D A+ L+ +M + +++ +I
Sbjct: 54 AREVFNQVPSPHVSLYTKMITGYTRSNRLVD-----ALNLFDEMPVRDV----VSWNSMI 104
Query: 131 KGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVV 190
GC D + + ++ + V + +++N G + A +LF ++PV D
Sbjct: 105 SGCVECGDMNTAVKLFDEMPE----RSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTA 160
Query: 191 TWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQIS 250
WNSMV GYL+ G +D+AL LF++M GKN+ISW ++I GL Q + EAL+LF M +
Sbjct: 161 AWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCC 220
Query: 251 VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAF 310
+K V++ACA A G VH + + G + + +L+ Y C + +
Sbjct: 221 IKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSR 280
Query: 311 EIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSG 370
++F+E + + WTA++S ++L+ A F M R + PN TF L++C+ G
Sbjct: 281 KVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALG 340
Query: 371 LVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGAL 430
++ G+ V ++ L E + +V + S + +++V + + + + W ++
Sbjct: 341 TLDWGKEMHGVAVKLGL-ETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSI 398
Query: 431 LGGCQMHG 438
+ GC HG
Sbjct: 399 IVGCAQHG 406
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 147/305 (48%), Gaps = 23/305 (7%)
Query: 144 IVHAQVVK-FGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRN 202
++H + + F + N LI ++ + AR++F+++P V + M+ GY R+
Sbjct: 20 VIHGKCYRSFSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRS 79
Query: 203 GGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVL 262
L +AL+LF +M ++++SWNS+I+G V+ G A++LF EM + SV ++ +++
Sbjct: 80 NRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV----VSWTAMV 135
Query: 263 SACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTS 322
+ C + G +D + + + D ++V+ Y + G V A ++F++MP K+
Sbjct: 136 NGCFRSGKVDQAERLFYQMPVK----DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVI 191
Query: 323 AWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVM 382
+WT MI + +A D F M R +K F +++ACA++ G ++
Sbjct: 192 SWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLI 251
Query: 383 KRV------YLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQM 436
++ Y+ + YA + ++FDE V V VW ALL G +
Sbjct: 252 IKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKV--------HEQVAVWTALLSGYSL 303
Query: 437 HGNVE 441
+ E
Sbjct: 304 NKKHE 308
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 221 bits (564), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 151/519 (29%), Positives = 262/519 (50%), Gaps = 48/519 (9%)
Query: 17 ALSRLIEQCKNL--RELKR-IHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATN 73
L+ +I C+ L R L R IH ++T+ + +T++ + GS+ A
Sbjct: 299 TLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNA-----GSWREAEK 353
Query: 74 VFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGC 133
+F + D+ + MI Y + + D+ A+ Y+ M D + P+ +T ++ C
Sbjct: 354 LFSRMERKDIVSWTTMISGYE-YNFLPDK----AIDTYRMMDQDSVKPDEITVAAVLSAC 408
Query: 134 TRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWN 193
D +G +H +K +S V N+LIN+Y C +
Sbjct: 409 ATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCI------------------- 449
Query: 194 SMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKP 253
D ALD+F + KN+ISW SII GL EAL +M+ ++++P
Sbjct: 450 ------------DKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK-MTLQP 496
Query: 254 DKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIF 313
+ IT+ + L+ACA++GA+ GK +H+++ R G+ D + AL++MY +CG + A+ F
Sbjct: 497 NAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF 556
Query: 314 EEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVE 373
+KD ++W +++ ++ G G + F M ++ V+P+ +TF+ LL C+ S +V
Sbjct: 557 NSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVR 615
Query: 374 QGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGG 433
QG F M+ Y + P + HYAC+VDLL RA E+ I+ MP+ PD VWGALL
Sbjct: 616 QGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNA 674
Query: 434 CQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKI 493
C++H ++LGE A H+ +L+ + +Y+ LC++Y G++ ++R ++KE +
Sbjct: 675 CRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVD- 733
Query: 494 PGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEM 532
GCS +E+ G V F + K++ +L+ +M
Sbjct: 734 AGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKM 772
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 213/422 (50%), Gaps = 44/422 (10%)
Query: 17 ALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFH 76
AL RL E + E ++++ L+S SS L L F ++G+ A VF
Sbjct: 99 ALVRLCEWKRAQEEGSKVYSIALSS---MSSLGVELGNAFL--AMFVRFGNLVDAWYVFG 153
Query: 77 MINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKML-CDGIFPNCLTFPFLIKGCTR 135
++ +L +N+++ YA +F AM LY +ML G+ P+ TFP +++ C
Sbjct: 154 KMSERNLFSWNVLVGGYAKQG-----YFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGG 208
Query: 136 WMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSM 195
D A G+ VH VV++G+ D+ N+LI +Y+ CG + +AR LFD +P D+++WN+M
Sbjct: 209 IPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAM 268
Query: 196 VIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDK 255
+ GY NG + E LELF M+ +SV PD
Sbjct: 269 ISGYFENG-------------------------------MCHEGLELFFAMRGLSVDPDL 297
Query: 256 ITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEE 315
+T+ SV+SAC LG G+ +H+Y+ G D+ + +L MY G ++A ++F
Sbjct: 298 MTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSR 357
Query: 316 MPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQG 375
M KD +WT MIS + + L KA D + M++ VKP+ +T +LSACA G ++ G
Sbjct: 358 MERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
Query: 376 RWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQ 435
+ + LI V ++++ S+ + D+++ + ++P +V W +++ G +
Sbjct: 418 VELHKLAIKARLIS-YVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLR 475
Query: 436 MH 437
++
Sbjct: 476 LN 477
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 130/299 (43%), Gaps = 41/299 (13%)
Query: 229 GLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIEC 288
GL G +EA++L + MQ++ V D+ +++ C A + G V+S +
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 289 DVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEM- 347
V +G A + M+ + G + A+ +F +M E++ +W ++ +A G +A + M
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 348 ERAGVKPNHVTFVGLLSACAHSGLVEQGRWC-FDVMKRVYLIEPQVYH-----YACMVDL 401
GVKP+ TF +L C + +G+ V++ Y ++ V + Y D+
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 402 LSRARLFD---------------------------ESVILIRSMPMEPDVYVWGALLGGC 434
S LFD E +R + ++PD+ +++ C
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 435 QMHGNVELGEKVALHLIDLEPHNHAFYMNLCD----IYGKAGRFDAAKRIRNLLKERRV 489
++ G+ LG + ++I A +++C+ +Y AG + A+++ + ++ + +
Sbjct: 308 ELLGDRRLGRDIHAYVITT---GFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI 363
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 221 bits (564), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 196/339 (57%), Gaps = 6/339 (1%)
Query: 188 DVVTWNSMVIGYLRNGGLDNALDLFRKM-NGKNIISWNSIITGLVQGGLAKEALELFHEM 246
+ T N+++ Y + G +D +F +M ++ ++WNS+I+G + L +AL+L M
Sbjct: 551 EATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFM 610
Query: 247 QQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLV 306
Q + D A+VLSA A + ++ G VH+ R +E DVV+G+ALV+MY KCG +
Sbjct: 611 LQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRL 670
Query: 307 QQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAG-VKPNHVTFVGLLSA 365
A F MP +++ +W +MIS +A HG G +A F M+ G P+HVTFVG+LSA
Sbjct: 671 DYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSA 730
Query: 366 CAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVY 425
C+H+GL+E+G F+ M Y + P++ H++CM D+L RA D+ I MPM+P+V
Sbjct: 731 CSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVL 790
Query: 426 VWGALLGG-CQMHG-NVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNL 483
+W +LG C+ +G ELG+K A L LEP N Y+ L ++Y GR++ + R
Sbjct: 791 IWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKK 850
Query: 484 LKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLV 522
+K+ V+K+ G S + + V F AG S P D++
Sbjct: 851 MKDADVKKE-AGYSWVTMKDGVHMFVAGDKSH-PDADVI 887
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 179/414 (43%), Gaps = 40/414 (9%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
++K GS A VF+ + + D +N MI G+D + F A+ YK M I P
Sbjct: 359 YAKCGSIADARRVFYFMTDKDSVSWNSMI---TGLD--QNGCFIEAVERYKSMRRHDILP 413
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
T + C G+ +H + +K G +V N+L+ LY G L+ RK+F
Sbjct: 414 GSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIF 473
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
+P D V+WNS++ R+ + +L EA+
Sbjct: 474 SSMPEHDQVSWNSIIGALARS---ERSL---------------------------PEAVV 503
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
F Q+ K ++IT +SVLSA + L + GK +H +N I + AL+ YG
Sbjct: 504 CFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYG 563
Query: 302 KCGLVQQAFEIFEEMPE-KDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
KCG + +IF M E +D W +MIS + + L KA D M + G + + +
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYA 623
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
+LSA A +E+G R L E V + +VD+ S+ D ++ +MP+
Sbjct: 624 TVLSAFASVATLERGMEVHACSVRACL-ESDVVVGSALVDMYSKCGRLDYALRFFNTMPV 682
Query: 421 EPDVYVWGALLGGCQMHGNVELGEKV--ALHLIDLEPHNHAFYMNLCDIYGKAG 472
+ Y W +++ G HG E K+ + L P +H ++ + AG
Sbjct: 683 R-NSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAG 735
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 33/220 (15%)
Query: 142 GEIVHAQVVKFGFLSDVFN-GNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYL 200
G VH V+ G + + GN L+N+Y CG +++AR++
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRV-------------------- 371
Query: 201 RNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIAS 260
F M K+ +SWNS+ITGL Q G EA+E + M++ + P T+ S
Sbjct: 372 -----------FYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLIS 420
Query: 261 VLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKD 320
LS+CA L G+ +H + GI+ +V + AL+ +Y + G + + +IF MPE D
Sbjct: 421 SLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHD 480
Query: 321 TSAWTAMISVFALHGLGW-KAFDCFLEMERAGVKPNHVTF 359
+W ++I A +A CFL +RAG K N +TF
Sbjct: 481 QVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITF 520
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 166/388 (42%), Gaps = 43/388 (11%)
Query: 52 LITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLY 111
+++ +L S + GS YA F I + +N +I Y+ D R A ++
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYS--QAGDQRS---AFRIF 194
Query: 112 KKMLCDGIFPNCLTFPFLIKGCTRWM--DGASGEIVHAQVVKFGFLSDVFNGNSLINLYM 169
M DG P TF L+ D E + + K G L+D+F G+ L++ +
Sbjct: 195 SSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFA 254
Query: 170 TCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNS---I 226
G LS ARK+F+++ + VT N +++G +R + A LF MN +S S +
Sbjct: 255 KSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVIL 314
Query: 227 ITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNG- 285
++ + LA+E + G+ VH ++ G
Sbjct: 315 LSSFPEYSLAEEV------------------------------GLKKGREVHGHVITTGL 344
Query: 286 IECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFL 345
++ V IG LVNMY KCG + A +F M +KD+ +W +MI+ +G +A + +
Sbjct: 345 VDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYK 404
Query: 346 EMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRA 405
M R + P T + LS+CA + G+ ++ I+ V ++ L +
Sbjct: 405 SMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG-IDLNVSVSNALMTLYAET 463
Query: 406 RLFDESVILIRSMPMEPDVYVWGALLGG 433
+E + SMP E D W +++G
Sbjct: 464 GYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 139/329 (42%), Gaps = 70/329 (21%)
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
NC+ F ++ C A H+++ K DV+ N+LIN Y+ G +ARK+F
Sbjct: 3 NCVPLSF-VQSCVGHRGAA--RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVF 59
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
DE+P+ + V+W +V GY RNG AL R M + I S
Sbjct: 60 DEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFS------------------- 100
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAID--HGKWVHSYLRRNGIECDVVIGTALVNM 299
++ SVL AC ++G++ G+ +H + + D V+ L++M
Sbjct: 101 ------------NQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISM 148
Query: 300 YGKC-GLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVT 358
Y KC G V A F ++ K++ +W ++ISV++ G AF F M+ G +P T
Sbjct: 149 YWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYT 208
Query: 359 FVGLL-SACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRS 417
F L+ +AC+ L EP V RL ++ + I+
Sbjct: 209 FGSLVTTACS-------------------LTEPDV-------------RLLEQIMCTIQK 236
Query: 418 MPMEPDVYVWGALLGGCQMHGNVELGEKV 446
+ D++V L+ G++ KV
Sbjct: 237 SGLLTDLFVGSGLVSAFAKSGSLSYARKV 265
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 112/266 (42%), Gaps = 40/266 (15%)
Query: 57 LFSCSFSKYGSFTYATNVF-HMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKML 115
L +C + K G +F M D +N MI Y + + +A+ L ML
Sbjct: 558 LIAC-YGKCGEMDGCEKIFSRMAERRDNVTWNSMISGY-----IHNELLAKALDLVWFML 611
Query: 116 CDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLS 175
G + + ++ G VHA V+ SDV G++L+++Y CG L
Sbjct: 612 QTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLD 671
Query: 176 NARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGL 235
A + F+ +PV + +WNSM+ GY R+G QG
Sbjct: 672 YALRFFNTMPVRNSYSWNSMISGYARHG----------------------------QG-- 701
Query: 236 AKEALELFHEMQ-QISVKPDKITIASVLSACAQLGAIDHG-KWVHSYLRRNGIECDVVIG 293
+EAL+LF M+ PD +T VLSAC+ G ++ G K S G+ +
Sbjct: 702 -EEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHF 760
Query: 294 TALVNMYGKCGLVQQAFEIFEEMPEK 319
+ + ++ G+ G + + + E+MP K
Sbjct: 761 SCMADVLGRAGELDKLEDFIEKMPMK 786
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 113/274 (41%), Gaps = 39/274 (14%)
Query: 107 AMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGA--SGEIVHAQVVKFGFLSDVFNGNSL 164
A+V + M+ +GIF N F +++ C G +H + K + D N L
Sbjct: 86 ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL 145
Query: 165 INLYMTC-GLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISW 223
I++Y C G + A F +I V + V+WNS
Sbjct: 146 ISMYWKCIGSVGYALCAFGDIEVKNSVSWNS----------------------------- 176
Query: 224 NSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHG--KWVHSYL 281
II+ Q G + A +F MQ +P + T S+++ L D + + +
Sbjct: 177 --IISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTI 234
Query: 282 RRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAF 341
+++G+ D+ +G+ LV+ + K G + A ++F +M ++ ++ G +A
Sbjct: 235 QKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEAT 294
Query: 342 DCFLEMERA-GVKPNHVTFVGLLSACAHSGLVEQ 374
F++M V P ++V LLS+ L E+
Sbjct: 295 KLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEE 326
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 143/510 (28%), Positives = 264/510 (51%), Gaps = 47/510 (9%)
Query: 5 SLIESKSLTLKN---ALSRLIEQCKNLREL---KRIHTQILTSPNLHSSDQYHLITRLLF 58
+ +E +SL L+ S ++ C +R L K+IH+Q + S+D + + +
Sbjct: 312 TFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYM 371
Query: 59 SCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDG 118
CS S+ A+ VF + +P++ + +I V D C +++ +M+
Sbjct: 372 KCSASE----VEASRVFGAMVSPNVVSWTTLILGLVDHGFVQD---CFGLLM--EMVKRE 422
Query: 119 IFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNAR 178
+ PN +T +++ C++ +HA +++ ++ GNSL++ Y +++R
Sbjct: 423 VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAY------ASSR 476
Query: 179 KLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKE 238
K+ D A ++ R M ++ I++ S++T + G +
Sbjct: 477 KV-------------------------DYAWNVIRSMKRRDNITYTSLVTRFNELGKHEM 511
Query: 239 ALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVN 298
AL + + M ++ D++++ +SA A LGA++ GK +H Y ++G + +LV+
Sbjct: 512 ALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVD 571
Query: 299 MYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVT 358
MY KCG ++ A ++FEE+ D +W ++S A +G A F EM +P+ VT
Sbjct: 572 MYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVT 631
Query: 359 FVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSM 418
F+ LLSAC++ L + G F VMK++Y IEPQV HY +V +L RA +E+ ++ +M
Sbjct: 632 FLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETM 691
Query: 419 PMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAK 478
++P+ ++ LL C+ GN+ LGE +A + L P + A Y+ L D+Y ++G+ + A+
Sbjct: 692 HLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQ 751
Query: 479 RIRNLLKERRVQKKIPGCSMIEINGVVQEF 508
+ RNL+ E+R+ KK+ G S +E+ G V F
Sbjct: 752 KTRNLMTEKRLSKKL-GKSTVEVQGKVHSF 780
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 167/371 (45%), Gaps = 38/371 (10%)
Query: 71 ATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLI 130
A +F +++ + + +MI A+ + F A+ L+++M+ G PN TF ++
Sbjct: 77 ARKLFDEMSHRTVFAWTVMISAF-----TKSQEFASALSLFEEMMASGTHPNEFTFSSVV 131
Query: 131 KGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVV 190
+ C D + G VH V+K GF + G+SL +LY CG A +LF + D +
Sbjct: 132 RSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTI 191
Query: 191 TWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQIS 250
+W M I+ LV +EAL+ + EM +
Sbjct: 192 SWTMM-------------------------------ISSLVGARKWREALQFYSEMVKAG 220
Query: 251 VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAF 310
V P++ T +L A + LG ++ GK +HS + GI +VV+ T+LV+ Y + ++ A
Sbjct: 221 VPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAV 279
Query: 311 EIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSG 370
+ E+D WT+++S F + +A FLEM G++PN+ T+ +LS C+
Sbjct: 280 RVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVR 339
Query: 371 LVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGAL 430
++ G+ +V E +VD+ + + + + P+V W L
Sbjct: 340 SLDFGKQIHSQTIKVGF-EDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTL 398
Query: 431 LGGCQMHGNVE 441
+ G HG V+
Sbjct: 399 ILGLVDHGFVQ 409
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 191/412 (46%), Gaps = 47/412 (11%)
Query: 17 ALSRLIEQCKNLRELK---RIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATN 73
S ++ C LR++ R+H ++ + +S ++ L +SK G F A
Sbjct: 126 TFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDL-----YSKCGQFKEACE 180
Query: 74 VFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGC 133
+F + N D + +MI + G R + A+ Y +M+ G+ PN TF L+ G
Sbjct: 181 LFSSLQNADTISWTMMISSLVGA-----RKWREALQFYSEMVKAGVPPNEFTFVKLL-GA 234
Query: 134 TRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWN 193
+ ++ G+ +H+ ++ G IP+ +VV
Sbjct: 235 SSFLGLEFGKTIHSNIIVRG------------------------------IPL-NVVLKT 263
Query: 194 SMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKP 253
S+V Y + +++A+ + +++ W S+++G V+ AKEA+ F EM+ + ++P
Sbjct: 264 SLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQP 323
Query: 254 DKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQ-QAFEI 312
+ T +++LS C+ + ++D GK +HS + G E +G ALV+MY KC + +A +
Sbjct: 324 NNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRV 383
Query: 313 FEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLV 372
F M + +WT +I HG F +EM + V+PN VT G+L AC+ V
Sbjct: 384 FGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHV 443
Query: 373 EQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDV 424
+ + R + ++ ++ +VD + +R D + +IRSM ++
Sbjct: 444 RRVLEIHAYLLRRH-VDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNI 494
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 144/278 (51%), Gaps = 7/278 (2%)
Query: 193 NSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVK 252
N+++ YL+ G+ NA LF +M+ + + +W +I+ + AL LF EM
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTH 121
Query: 253 PDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEI 312
P++ T +SV+ +CA L I +G VH + + G E + V+G++L ++Y KCG ++A E+
Sbjct: 122 PNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACEL 181
Query: 313 FEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLV 372
F + DT +WT MIS +A + EM +AGV PN TFV LL A + GL
Sbjct: 182 FSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL- 240
Query: 373 EQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLG 432
E G+ + V I V +VD S+ +++V ++ S E DV++W +++
Sbjct: 241 EFGKTIHSNII-VRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNS-SGEQDVFLWTSVVS 298
Query: 433 GC--QMHGNVELGEKVALHLIDLEPHNHAF--YMNLCD 466
G + +G + + + L+P+N + ++LC
Sbjct: 299 GFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCS 336
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 191/453 (42%), Gaps = 74/453 (16%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+S++ A V + D+ ++ ++ + V + A+ + +M G+ P
Sbjct: 269 YSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGF-----VRNLRAKEAVGTFLEMRSLGLQP 323
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLS-NARKL 180
N T+ ++ C+ G+ +H+Q +K GF GN+L+++YM C A ++
Sbjct: 324 NNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRV 383
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
F + +VV+W ++++ GLV G ++
Sbjct: 384 FGAMVSPNVVSWTTLIL-------------------------------GLVDHGFVQDCF 412
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
L EM + V+P+ +T++ VL AC++L + +H+YL R ++ ++V+G +LV+ Y
Sbjct: 413 GLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAY 472
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
V A+ + M +D +T++++ F G A M G++ + ++
Sbjct: 473 ASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLP 532
Query: 361 GLLSACAHSGLVEQGR--WCFDV--------------------------MKRVY--LIEP 390
G +SA A+ G +E G+ C+ V K+V+ + P
Sbjct: 533 GFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATP 592
Query: 391 QVYHYACMVDLLSRARLFDESVILIRSMPM---EPDVYVWGALLGGCQMHGNVELGE--- 444
V + +V L+ ++ M M EPD + LL C +LG
Sbjct: 593 DVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYF 652
Query: 445 KVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAA 477
+V + ++EP Y++L I G+AGR + A
Sbjct: 653 QVMKKIYNIEPQVE-HYVHLVGILGRAGRLEEA 684
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/477 (28%), Positives = 256/477 (53%), Gaps = 21/477 (4%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+++ G A +F + ++ +N M++A +D+ AM L+++M +
Sbjct: 150 YAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDE-----AMNLFERMPRRDV-- 202
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSD--VFNGNSLINLYMTCGLLSNARK 179
+++ ++ G + +G++ A+ + F + + + + N++I Y + A +
Sbjct: 203 --VSWTAMVDGLAK-----NGKVDEARRL-FDCMPERNIISWNAMITGYAQNNRIDEADQ 254
Query: 180 LFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEA 239
LF +P D +WN+M+ G++RN ++ A LF +M KN+ISW ++ITG V+ +EA
Sbjct: 255 LFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEA 314
Query: 240 LELFHEM-QQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVN 298
L +F +M + SVKP+ T S+LSAC+ L + G+ +H + ++ + + ++ +AL+N
Sbjct: 315 LNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLN 374
Query: 299 MYGKCGLVQQAFEIFEE--MPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNH 356
MY K G + A ++F+ + ++D +W +MI+V+A HG G +A + + +M + G KP+
Sbjct: 375 MYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSA 434
Query: 357 VTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIR 416
VT++ LL AC+H+GLVE+G F + R + + HY C+VDL RA + I
Sbjct: 435 VTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFIN 494
Query: 417 SMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDA 476
+GA+L C +H V + ++V +++ + Y+ + +IY G+ +
Sbjct: 495 CDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREE 554
Query: 477 AKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
A +R +KE+ ++K+ PGCS +++ F G S + L IL L N+M+
Sbjct: 555 AAEMRMKMKEKGLKKQ-PGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMR 610
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 174/383 (45%), Gaps = 69/383 (18%)
Query: 157 DVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMN 216
+V ++++ Y+ LS A LF E+P +VV+WN+M+ GY ++G +D AL+LF +M
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMP 167
Query: 217 GKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGK- 275
+NI+SWNS++ LVQ G EA+ LF M + D ++ +++ A+ G +D +
Sbjct: 168 ERNIVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDEARR 223
Query: 276 ------------W---VHSYLRRNGI-----------ECDVVIGTALVNMYGKCGLVQQA 309
W + Y + N I E D ++ + + + +A
Sbjct: 224 LFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKA 283
Query: 310 FEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAG-VKPNHVTFVGLLSACAH 368
+F+ MPEK+ +WT MI+ + + +A + F +M R G VKPN T+V +LSAC+
Sbjct: 284 CGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSD 343
Query: 369 -SGLVEQGRWCFDVMKRVY-----LIEPQVYHYACMVDLLSRARLFDESVI--------- 413
+GLVE + + K V+ + + Y+ +L++ ++FD ++
Sbjct: 344 LAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWN 403
Query: 414 --------------------LIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDL 453
+R +P + LL C G VE G + L+
Sbjct: 404 SMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRD 463
Query: 454 E--PHNHAFYMNLCDIYGKAGRF 474
E P Y L D+ G+AGR
Sbjct: 464 ESLPLREEHYTCLVDLCGRAGRL 486
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 157/357 (43%), Gaps = 60/357 (16%)
Query: 164 LINLYMTCGLLSNARKLFDEIPVTD--------------------------------VVT 191
LI G ++ ARKLFD +P D VVT
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 192 WNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISV 251
W +MV GYLR+ L A LF++M +N++SWN++I G Q G +ALELF EM + ++
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI 171
Query: 252 KPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFE 311
++ S++ A Q G ID + + R DVV TA+V+ K G V +A
Sbjct: 172 ----VSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARR 223
Query: 312 IFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGL 371
+F+ MPE++ +W AMI+ +A + +A F M + G +
Sbjct: 224 LFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRN------ 277
Query: 372 VEQGRWC--FDVMKRVYLIEPQVYHYACMVDLLSRARLFDESV----ILIRSMPMEPDVY 425
E + C FD M E V + M+ + +E++ ++R ++P+V
Sbjct: 278 REMNKACGLFDRMP-----EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVG 332
Query: 426 VWGALLGGCQMHGNVELGEKVALHLIDLEPH--NHAFYMNLCDIYGKAGRFDAAKRI 480
+ ++L C + G+++ LI H N L ++Y K+G AA+++
Sbjct: 333 TYVSILSACSDLAGLVEGQQIH-QLISKSVHQKNEIVTSALLNMYSKSGELIAARKM 388
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 144/438 (32%), Positives = 224/438 (51%), Gaps = 38/438 (8%)
Query: 61 SFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF 120
++SK G A+ +F I +PDL ++N+MI Y G G D+ + L+ M G
Sbjct: 150 AYSKAGLIVEASKLFCSIPDPDLALWNVMILGY-GCCGFWDK----GINLFNLMQHRGHQ 204
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
PNC T L G VHA +K S + G +L+N+Y C +++A +
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSV 264
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
F+ I D+V + +S+ITG + G KEAL
Sbjct: 265 FNSISEPDLV-------------------------------ACSSLITGYSRCGNHKEAL 293
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
LF E++ KPD + +A VL +CA+L GK VHSY+ R G+E D+ + +AL++MY
Sbjct: 294 HLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMY 353
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
KCGL++ A +F +PEK+ ++ ++I LHG AF+ F E+ G+ P+ +TF
Sbjct: 354 SKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFS 413
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
LL C HSGL+ +G+ F+ MK + IEPQ HY MV L+ A +E+ + S+
Sbjct: 414 ALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQK 473
Query: 421 EPDVYVWGALLGGCQMHGNVELGEKVALHL-IDLEPHNHAFYMNLCDIYGKAGRFDAAKR 479
D + GALL C++H N L E VA ++ + E + + L ++Y + GR+D +R
Sbjct: 474 PIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVER 533
Query: 480 IRNLLKERRVQKKIPGCS 497
+R+ + E K+PG S
Sbjct: 534 LRDGISE-SYGGKLPGIS 550
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 107/252 (42%), Gaps = 6/252 (2%)
Query: 199 YLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITI 258
Y N L +A LF +++ WNSII + L LF ++ + +PD T
Sbjct: 50 YALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTY 109
Query: 259 ASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPE 318
A + ++ + +H +G+ D + G+A+V Y K GL+ +A ++F +P+
Sbjct: 110 ACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPD 169
Query: 319 KDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWC 378
D + W MI + G K + F M+ G +PN T V L S L+ W
Sbjct: 170 PDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVA-WS 228
Query: 379 FDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHG 438
++ Y +V++ SR + + S+ EPD+ +L+ G G
Sbjct: 229 VHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSIS-EPDLVACSSLITGYSRCG 287
Query: 439 NVELGEKVALHL 450
N K ALHL
Sbjct: 288 N----HKEALHL 295
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 140/480 (29%), Positives = 246/480 (51%), Gaps = 50/480 (10%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+SK G +VFH ++ ++ + MI + DD A+ ++ M DG++P
Sbjct: 321 YSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDD-----AVSIFLNMRFDGVYP 370
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
N +TF LI G +H +K GF+S+ GNS I LY L +A+K
Sbjct: 371 NEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKA- 429
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
F + + IISWN++I+G Q G + EAL+
Sbjct: 430 ------------------------------FEDITFREIISWNAMISGFAQNGFSHEALK 459
Query: 242 LFHEMQQISVKPDKITIASVLSACA--QLGAIDHGKWVHSYLRRNGIECDVVIGTALVNM 299
+F ++ P++ T SVL+A A + ++ G+ H++L + G+ V+ +AL++M
Sbjct: 460 MFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDM 518
Query: 300 YGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
Y K G + ++ ++F EM +K+ WT++IS ++ HG + F +M + V P+ VTF
Sbjct: 519 YAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTF 578
Query: 360 VGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP 419
+ +L+AC G+V++G F++M VY +EP HY+CMVD+L RA E+ L+ +P
Sbjct: 579 LSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVP 638
Query: 420 MEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKR 479
P + ++LG C++HGNV++G KVA ++++P Y+ + +IY + +D A
Sbjct: 639 GGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAE 698
Query: 480 IRNLLKERRVQKKIPGCSMIEING-----VVQEFSAGGSSELPMKDLVLILDRLCNEMKI 534
IR ++++ V K+ G S I++ +Q FS+G S ++ +++ + EM +
Sbjct: 699 IRKAMRKKNVSKE-AGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNL 757
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 200/462 (43%), Gaps = 80/462 (17%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ K G F A +F + +PD+ +N + + G DD V+ +M G+
Sbjct: 121 YRKAGRFDNALCIFENLVDPDVVSWNTI------LSGFDDNQIALNFVV--RMKSAGVVF 172
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ T+ + C G + + VVK G SD+ GNS I +
Sbjct: 173 DAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITM-------------- 218
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQ-GGLAKEAL 240
Y R+G A +F +M+ K++ISWNS+++GL Q G EA+
Sbjct: 219 -----------------YSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAV 261
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
+F +M + V+ D ++ SV++ C + + +H + G E + +G L++ Y
Sbjct: 262 VIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRY 321
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
KCG+++ +F +M E++ +WT MIS A FL M GV PN VTFV
Sbjct: 322 SKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFV 376
Query: 361 GLLSACAHSGLVEQGRWCFDV-MKRVYLIEPQVYH-----YACMVDLLSRARLFD----- 409
GL++A + +++G + +K ++ EP V + YA L + F+
Sbjct: 377 GLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFR 436
Query: 410 -------------------ESVILIRSMPME--PDVYVWGALLGGCQMHGNVEL--GEKV 446
E++ + S E P+ Y +G++L ++ + G++
Sbjct: 437 EIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRC 496
Query: 447 ALHLIDLEPHNHAFYMN-LCDIYGKAGRFDAAKRIRNLLKER 487
HL+ L ++ + L D+Y K G D ++++ N + ++
Sbjct: 497 HAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQK 538
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 97/184 (52%), Gaps = 5/184 (2%)
Query: 187 TDVVTWNSMVIGYLRNGG-LDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHE 245
T V ++ V+G R G DNAL +F + +++SWN+I++G +A L
Sbjct: 108 TSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIA---LNFVVR 164
Query: 246 MQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGL 305
M+ V D T ++ LS C G + S + + G+E D+V+G + + MY + G
Sbjct: 165 MKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGS 224
Query: 306 VQQAFEIFEEMPEKDTSAWTAMISVFALHG-LGWKAFDCFLEMERAGVKPNHVTFVGLLS 364
+ A +F+EM KD +W +++S + G G++A F +M R GV+ +HV+F +++
Sbjct: 225 FRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVIT 284
Query: 365 ACAH 368
C H
Sbjct: 285 TCCH 288
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 11/235 (4%)
Query: 208 ALDLFRKMNGKN-IISWNSIITGLVQGGLAKEALELFHEMQQISV---KPDKITIASVLS 263
A LF + +N S N I+ ++ AL +F E Q+ D++T+ L
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 264 ACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSA 323
AC G + G +H + +G V + A++ MY K G A IFE + + D +
Sbjct: 87 ACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 324 WTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMK 383
W ++S F + + A + + M+ AGV + T+ LS C S G +
Sbjct: 145 WNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV 201
Query: 384 RVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHG 438
+ L E + + + SR+ F + + M + D+ W +LL G G
Sbjct: 202 KTGL-ESDLVVGNSFITMYSRSGSFRGARRVFDEMSFK-DMISWNSLLSGLSQEG 254
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 218 bits (556), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 143/483 (29%), Positives = 237/483 (49%), Gaps = 42/483 (8%)
Query: 51 HLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVL 110
HL T L+ + K G + V I N D+ + +MI + + +A+++
Sbjct: 281 HLKTALI--TMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAE-----KALIV 333
Query: 111 YKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMT 170
+ +ML G + ++ C + G VH V++ G+ D NSLI +Y
Sbjct: 334 FSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAK 393
Query: 171 CGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGL 230
C G LD +L +F +MN ++++SWN+II+G
Sbjct: 394 C-------------------------------GHLDKSLVIFERMNERDLVSWNAIISGY 422
Query: 231 VQGGLAKEALELFHEMQQISVKP-DKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECD 289
Q +AL LF EM+ +V+ D T+ S+L AC+ GA+ GK +H + R+ I
Sbjct: 423 AQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPC 482
Query: 290 VVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMER 349
++ TALV+MY KCG ++ A F+ + KD +W +I+ + HG G A + + E
Sbjct: 483 SLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLH 542
Query: 350 AGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFD 409
+G++PNHV F+ +LS+C+H+G+V+QG F M R + +EP H AC+VDLL RA+ +
Sbjct: 543 SGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIE 602
Query: 410 ESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYG 469
++ + P + V G +L C+ +G E+ + + +I+L+P + Y+ L +
Sbjct: 603 DAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFA 662
Query: 470 KAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLC 529
R+D N ++ + KK+PG S IE+NG F +S D V +L L
Sbjct: 663 AMKRWDDVSESWNQMRSLGL-KKLPGWSKIEMNGKTTTFFMNHTSH--SDDTVSLLKLLS 719
Query: 530 NEM 532
EM
Sbjct: 720 REM 722
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 199/438 (45%), Gaps = 55/438 (12%)
Query: 2 TMISLIESKSLTLKNALSRLIEQCKNLRELK---RIHTQILTSPNLHSSDQYHLITRLLF 58
T S++ +K L L++ C +L+ L IH Q+L N SSD Y I+ L
Sbjct: 33 TFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLV--NGFSSDFY--ISSSLV 88
Query: 59 SCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAY--AGMDGVDDRHFCRAMVLYKKMLC 116
+ ++K+G +A VF + D+ + MI Y AG+ G A L +M
Sbjct: 89 NL-YAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVG-------EACSLVNEMRF 140
Query: 117 DGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSN 176
GI P +T ++ G ++ + +H V +GF D+ NS++NLY C + +
Sbjct: 141 QGIKPGPVTLLEMLSGV---LEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGD 197
Query: 177 ARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLA 236
A+ LFD++ D+V+WN+M+ GY G + L L +M G +
Sbjct: 198 AKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGL---------------- 241
Query: 237 KEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTAL 296
+PD+ T + LS + ++ G+ +H + + G + D+ + TAL
Sbjct: 242 ---------------RPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTAL 286
Query: 297 VNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNH 356
+ MY KCG + ++ + E +P KD WT MIS G KA F EM ++G +
Sbjct: 287 ITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSS 346
Query: 357 VTFVGLLSACAHSGLVEQGRWCFD-VMKRVYLIEPQVYHYACMVDLLSRARLFDESVILI 415
++++CA G + G V++ Y ++ + ++ + ++ D+S+++
Sbjct: 347 EAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALN--SLITMYAKCGHLDKSLVIF 404
Query: 416 RSMPMEPDVYVWGALLGG 433
M E D+ W A++ G
Sbjct: 405 ERMN-ERDLVSWNAIISG 421
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 130/301 (43%), Gaps = 37/301 (12%)
Query: 223 WNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLR 282
+NS I L G K+ L F M + PD T S+L ACA L + G +H +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 283 RNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFD 342
NG D I ++LVN+Y K GL+ A ++FEEM E+D WTAMI ++ G+ +A
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 343 CFLEMERAGVKPNHVTFVGLLSA--------CAHSGLVEQGRWC-FDVMKRVYLIEPQVY 393
EM G+KP VT + +LS C H V G C VM + + +
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCD 193
Query: 394 HYACMVDLLSR----------------ARLFDESVIL-----IRSMPMEPDVYVWGALLG 432
H DL + A + + S IL +R + PD +GA L
Sbjct: 194 HVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLS 253
Query: 433 GCQMHGNVELGEKVALHLI----DLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERR 488
++E+G + ++ D++ H L +Y K G+ +A+ R+ + +
Sbjct: 254 VSGTMCDLEMGRMLHCQIVKTGFDVDMH---LKTALITMYLKCGKEEASYRVLETIPNKD 310
Query: 489 V 489
V
Sbjct: 311 V 311
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 218 bits (555), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 195/346 (56%), Gaps = 1/346 (0%)
Query: 188 DVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQ 247
D V N +V Y + + A +F + GK+++SW S+I+ G EA+ELF M
Sbjct: 520 DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMV 579
Query: 248 QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQ 307
+ + D + + +LSA A L A++ G+ +H YL R G + I A+V+MY CG +Q
Sbjct: 580 ETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQ 639
Query: 308 QAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACA 367
A +F+ + K +T+MI+ + +HG G A + F +M V P+H++F+ LL AC+
Sbjct: 640 SAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACS 699
Query: 368 HSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVW 427
H+GL+++GR +M+ Y +EP HY C+VD+L RA E+ ++ M EP VW
Sbjct: 700 HAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVW 759
Query: 428 GALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKER 487
ALL C+ H E+GE A L++LEP N + + +++ + GR++ +++R +K
Sbjct: 760 CALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKAS 819
Query: 488 RVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
++K PGCS IE++G V +F+A S K++ L + +++
Sbjct: 820 GMEKH-PGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLE 864
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 127/477 (26%), Positives = 218/477 (45%), Gaps = 80/477 (16%)
Query: 32 KRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIR 91
K IH +L S + HSS+ Y + L + +++ G A + +NN D+ +N +I+
Sbjct: 304 KEIHASVLKS-STHSSELY--VCNALIAM-YTRCGKMPQAERILRQMNNADVVTWNSLIK 359
Query: 92 AYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVK 151
Y V + + A+ + M+ G + ++ +I R + +G +HA V+K
Sbjct: 360 GY-----VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK 414
Query: 152 FGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDL 211
G+ S++ GN+LI++Y C L + F + D+++W +++ GY +N AL+L
Sbjct: 415 HGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALEL 474
Query: 212 FRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAI 271
FR +AK+ +E+ D++ + S+L A + L ++
Sbjct: 475 FRD--------------------VAKKRMEI-----------DEMILGSILRASSVLKSM 503
Query: 272 DHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVF 331
K +H ++ R G+ D VI LV++YGKC + A +FE + KD +WT+MIS
Sbjct: 504 LIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSS 562
Query: 332 ALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGR--WCFDVMKRVYLIE 389
AL+G +A + F M G+ + V + +LSA A + +GR C+ ++++ + +E
Sbjct: 563 ALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCY-LLRKGFCLE 621
Query: 390 PQ-----VYHYACMVDLLSRARLFDE------------------------SVILIRSMPM 420
V YAC DL S +FD +V L M
Sbjct: 622 GSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRH 681
Query: 421 E---PDVYVWGALLGGCQMHGNVELGE---KVALHLIDLEPHNHAFYMNLCDIYGKA 471
E PD + ALL C G ++ G K+ H +LEP Y+ L D+ G+A
Sbjct: 682 ENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPE-HYVCLVDMLGRA 737
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/500 (23%), Positives = 222/500 (44%), Gaps = 91/500 (18%)
Query: 17 ALSRLIEQCKNLREL---KRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATN 73
A + ++E C R + +++H++I + S + L +L+F + K GS A
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKT--FPSFELDFLAGKLVFM--YGKCGSLDDAEK 137
Query: 74 VFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGC 133
VF + + +N MI AY V + A+ LY M +G+ +FP L+K C
Sbjct: 138 VFDEMPDRTAFAWNTMIGAY-----VSNGEPASALALYWNMRVEGVPLGLSSFPALLKAC 192
Query: 134 TRWMDGASGEIVHAQVVKFGFLSD----------------------VFNG---------- 161
+ D SG +H+ +VK G+ S +F+G
Sbjct: 193 AKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLW 252
Query: 162 NSLINLYMTCGLLSNARKLFDEIPVT---------------------------------- 187
NS+++ Y T G +LF E+ +T
Sbjct: 253 NSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLK 312
Query: 188 ------DVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
++ N+++ Y R G + A + R+MN ++++WNS+I G VQ + KEALE
Sbjct: 313 SSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALE 372
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
F +M K D++++ S+++A +L + G +H+Y+ ++G + ++ +G L++MY
Sbjct: 373 FFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYS 432
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KC L F M +KD +WT +I+ +A + +A + F ++ + ++ + +
Sbjct: 433 KCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGS 492
Query: 362 LLSACA--HSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP 419
+L A + S L+ + C + R L++ + + +VD+ + R + + S+
Sbjct: 493 ILRASSVLKSMLIVKEIHCH--ILRKGLLDTVIQNE--LVDVYGKCRNMGYATRVFESIK 548
Query: 420 MEPDVYVWGALLGGCQMHGN 439
+ DV W +++ ++GN
Sbjct: 549 GK-DVVSWTSMISSSALNGN 567
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 151/361 (41%), Gaps = 64/361 (17%)
Query: 26 KNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRV 85
K++ +K IH IL L + Q L+ + K + YAT VF I D+
Sbjct: 501 KSMLIVKEIHCHILRKGLLDTVIQNELVD------VYGKCRNMGYATRVFESIKGKDVVS 554
Query: 86 YNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIV 145
+ MI + A ++G + A+ L+++M+ G+ + + ++ G +
Sbjct: 555 WTSMISSSA-LNGNESE----AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREI 609
Query: 146 HAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGL 205
H +++ GF + +++++Y CG L +A+ +FD I ++ + SM+ Y +G
Sbjct: 610 HCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCG 669
Query: 206 DNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSAC 265
A++LF KM +N V PD I+ ++L AC
Sbjct: 670 KAAVELFDKMRHEN-------------------------------VSPDHISFLALLYAC 698
Query: 266 AQLGAIDHGKWV-----HSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKD 320
+ G +D G+ H Y E V LV+M G+ V +AFE + M +
Sbjct: 699 SHAGLLDEGRGFLKIMEHEYELEPWPEHYV----CLVDMLGRANCVVEAFEFVKMMKTEP 754
Query: 321 TS-AWTAMISVFALHG---LGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGR 376
T+ W A+++ H +G A LE+E P ++ V + A EQGR
Sbjct: 755 TAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKN--PGNLVLVSNVFA-------EQGR 805
Query: 377 W 377
W
Sbjct: 806 W 806
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/444 (30%), Positives = 228/444 (51%), Gaps = 13/444 (2%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+S+ G + A +F + + + YN I M+ L +K + P
Sbjct: 174 YSRCGEWVLAARMFEKVPHKSVVTYNAFISGL--MENGVMNLVPSVFNLMRKFSSEE--P 229
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
N +TF I C ++ G +H V+K F + G +LI++Y C +A +F
Sbjct: 230 NDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVF 289
Query: 182 DEIPVT-DVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNI----ISWNSIITGLVQGGLA 236
E+ T ++++WNS++ G + NG + A++LF K++ + + +WNS+I+G Q G
Sbjct: 290 TELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKV 349
Query: 237 KEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTAL 296
EA + F M + + P + S+LSAC+ + + +GK +H ++ + E D+ + T+L
Sbjct: 350 IEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSL 409
Query: 297 VNMYGKCGLVQQAFEIFE--EMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKP 354
++MY KCGL A IF+ E KD W MIS + HG A + F + V+P
Sbjct: 410 IDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEP 469
Query: 355 NHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVIL 414
+ TF +LSAC+H G VE+G F +M+ Y +P H CM+DLL R+ E+ +
Sbjct: 470 SLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEV 529
Query: 415 IRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRF 474
I M +LLG C+ H + LGE+ A+ L +LEP N A ++ L IY R+
Sbjct: 530 IDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERW 588
Query: 475 DAAKRIRNLLKERRVQKKIPGCSM 498
+ + IR ++ ++++ K+PG S+
Sbjct: 589 EDVESIRQVIDQKQLV-KLPGLSL 611
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 162/332 (48%), Gaps = 42/332 (12%)
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
PN TFP L+K C + D G I+HAQVVK GF DVF +L+++YM
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVK-------- 80
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
VTD AL + +M + I S N+ ++GL++ G ++A
Sbjct: 81 ----QVTD-------------------ALKVLDEMPERGIASVNAAVSGLLENGFCRDAF 117
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
+F + + + +T+ASVL C G I+ G +H ++G E +V +GT+LV+MY
Sbjct: 118 RMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMY 174
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMER-AGVKPNHVTF 359
+CG A +FE++P K + A IS +G+ F M + + +PN VTF
Sbjct: 175 SRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTF 234
Query: 360 VGLLSACAHSGLVEQGRWCFD-VMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSM 418
V ++ACA ++ GR VMK+ + E V ++D+ S+ R + + I+ +
Sbjct: 235 VNAITACASLLNLQYGRQLHGLVMKKEFQFETMV--GTALIDMYSKCRCWKSAYIVFTEL 292
Query: 419 PMEPDVYVWGALLGGCQMHGN----VELGEKV 446
++ W +++ G ++G VEL EK+
Sbjct: 293 KDTRNLISWNSVISGMMINGQHETAVELFEKL 324
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 190/416 (45%), Gaps = 62/416 (14%)
Query: 94 AGMDGVDDRHFCR-AMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKF 152
A + G+ + FCR A ++ G N +T ++ GC D G +H +K
Sbjct: 102 AAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCG---DIEGGMQLHCLAMKS 158
Query: 153 GFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLD---NAL 209
GF +V+ G SL+++Y CG A ++F+++P VVT+N+ + G + NG ++ +
Sbjct: 159 GFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVF 218
Query: 210 DLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLG 269
+L RK + S +P+ +T + ++ACA L
Sbjct: 219 NLMRKFS---------------------------------SEEPNDVTFVNAITACASLL 245
Query: 270 AIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTS---AWTA 326
+ +G+ +H + + + + ++GTAL++MY KC + A+ +F E+ KDT +W +
Sbjct: 246 NLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTEL--KDTRNLISWNS 303
Query: 327 MISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVY 386
+IS ++G A + F +++ G+KP+ T+ L+S + G V + F+ M V
Sbjct: 304 VISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVV 363
Query: 387 LIEPQVYHYACMVDLLS---------RARLFDESVILIRSMPMEPDVYVWGALLGGCQMH 437
++ P + C+ LLS + VI E D++V +L+
Sbjct: 364 MV-PSL---KCLTSLLSACSDIWTLKNGKEIHGHVI---KAAAERDIFVLTSLIDMYMKC 416
Query: 438 GNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKI 493
G ++ + +P + F+ + YGK G ++A I LL+E +V+ +
Sbjct: 417 GLSSWARRI-FDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSL 471
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 20/280 (7%)
Query: 227 ITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGI 286
++ LV GG + + + +S P+K T +L +CA+LG + G+ +H+ + + G
Sbjct: 11 VSNLVTGGTSLDVI--------LSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGF 62
Query: 287 ECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLE 346
DV TALV+MY K V A ++ +EMPE+ ++ A +S +G AF F +
Sbjct: 63 FVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGD 122
Query: 347 MERAGVKPNHVTFVGLLSACAHSGLVEQGRW--CFDVMKRVYLIEPQVYHYACMVDLLSR 404
+G N VT +L C G +E G C MK + E +VY +V + SR
Sbjct: 123 ARVSGSGMNSVTVASVLGGC---GDIEGGMQLHCL-AMKSGF--EMEVYVGTSLVSMYSR 176
Query: 405 ARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKV--ALHLIDLEPHNHAFYM 462
+ + + +P + V + A + G +G + L V + E N ++
Sbjct: 177 CGEWVLAARMFEKVPHK-SVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFV 235
Query: 463 NLCDIYGKAGRFDAAKRIRNLLKERRVQ-KKIPGCSMIEI 501
N +++ L+ ++ Q + + G ++I++
Sbjct: 236 NAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDM 275
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 141/478 (29%), Positives = 241/478 (50%), Gaps = 13/478 (2%)
Query: 53 ITRLLFSCSFSKYGSFTYATNVFHMINNPDLR---VYNIMIRAYAGMDGVDDRHFCRAMV 109
+ R ++ + G A +VF NP+L +N +I YA +G ++ A+
Sbjct: 194 VARNAMIAAYCREGDIDKALSVF--WRNPELNDTISWNTLIAGYA-QNGYEEE----ALK 246
Query: 110 LYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYM 169
+ M +G+ + +F ++ + G+ VHA+V+K G S+ F + ++++Y
Sbjct: 247 MAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYC 306
Query: 170 TCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITG 229
CG + A ++ + +SM++GY G + A LF ++ KN++ W ++ G
Sbjct: 307 KCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLG 366
Query: 230 LVQGGLAKEALELFHE-MQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIEC 288
+ LEL + + PD + + SVL AC+ ++ GK +H + R GI
Sbjct: 367 YLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILM 426
Query: 289 DVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEME 348
D + TA V+MY KCG V+ A IF+ E+DT + AMI+ A HG K+F F +M
Sbjct: 427 DKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMT 486
Query: 349 RAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLF 408
G KP+ +TF+ LLSAC H GLV +G F M Y I P+ HY CM+DL +A
Sbjct: 487 EGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRL 546
Query: 409 DESVILIRSM-PMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDI 467
D+++ L+ + +E D + GA L C + N EL ++V L+ +E N + Y+ + +
Sbjct: 547 DKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANA 606
Query: 468 YGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLIL 525
Y +GR+D +RIR+ ++ + ++ GCS I+ F++ S + + +L
Sbjct: 607 YASSGRWDEMQRIRHQMRGKELE-IFSGCSWANIDKQFHMFTSSDISHYETEAIYAML 663
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 133/539 (24%), Positives = 229/539 (42%), Gaps = 93/539 (17%)
Query: 16 NALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVF 75
N L L + LRE + + ++L N++S + ++ K+ + A +F
Sbjct: 27 NQLVNLYSKSGLLREARNVFDEML-ERNVYSWNA--------VIAAYVKFNNVKEARELF 77
Query: 76 HMIN-NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCT 134
N DL YN ++ +A DG + +++K D I+ + T ++K
Sbjct: 78 ESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEK-DDIWIDDFTVTTMVKLSA 136
Query: 135 RWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDE--IPVTDVVTW 192
+ + GE +H +VK G F +SLI++Y CG +F+ + D V
Sbjct: 137 KLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVAR 196
Query: 193 NSMVIGYLRNGGLDNALDLF-RKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISV 251
N+M+ Y R G +D AL +F R + ISWN++I G Q G +EAL++ M++ +
Sbjct: 197 NAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGL 256
Query: 252 KPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQ---- 307
K D+ + +VL+ + L ++ GK VH+ + +NG + + + +V++Y KCG ++
Sbjct: 257 KWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAES 316
Query: 308 ---------------------------QAFEIFEEMPEKDTSAWTAMISVFALHGLGWKA 340
+A +F+ + EK+ WTAM L L +
Sbjct: 317 AHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMF----LGYLNLRQ 372
Query: 341 FDCFLEMERAGV-----KPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHY 395
D LE+ RA + P+ + V +L AC+ +E G+ R ++ +
Sbjct: 373 PDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVT 432
Query: 396 ACMVDLLSR-------ARLFDES----VILIRSM-----------------------PME 421
A VD+ S+ R+FD S ++ +M +
Sbjct: 433 A-FVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFK 491
Query: 422 PDVYVWGALLGGCQMHGNVELGEKVALHLID---LEPHNHAFYMNLCDIYGKAGRFDAA 477
PD + ALL C+ G V GEK +I+ + P Y + D+YGKA R D A
Sbjct: 492 PDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPET-GHYTCMIDLYGKAYRLDKA 549
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 191/464 (41%), Gaps = 108/464 (23%)
Query: 142 GEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLR 201
G + H + +K G + N L+NLY GLL AR +FDE+ +V +WN+++ Y++
Sbjct: 7 GFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVK 66
Query: 202 NGGLDNALDLFRKMN-GKNIISWNSIITGLVQ-GGLAKEALELFHEM---QQISVKPDKI 256
+ A +LF N +++I++N++++G + G EA+E+F EM ++ + D
Sbjct: 67 FNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDF 126
Query: 257 TIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGL----------- 305
T+ +++ A+L + +G+ +H L + G + ++L++MY KCG
Sbjct: 127 TVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGS 186
Query: 306 ----------------------VQQAFEIFEEMPE-KDTSAWTAMISVFALHGLGWKAFD 342
+ +A +F PE DT +W +I+ +A +G +A
Sbjct: 187 CVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALK 246
Query: 343 CFLEMERAGVKPNHVTFVGLLSACA-----------HSGLVEQGRWC--------FDV-- 381
+ ME G+K + +F +L+ + H+ +++ G + DV
Sbjct: 247 MAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYC 306
Query: 382 ----MK------------RVYLIEPQVYHYACMVDLLSRARLFD---------------- 409
MK +Y + Y+ ++ RLFD
Sbjct: 307 KCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLG 366
Query: 410 -------ESVI-----LIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEP-H 456
+SV+ I + PD V ++LG C + +E G+++ H +
Sbjct: 367 YLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILM 426
Query: 457 NHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRV---QKKIPGCS 497
+ D+Y K G + A+RI + ER I GC+
Sbjct: 427 DKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCA 470
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 196/390 (50%), Gaps = 32/390 (8%)
Query: 119 IFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNAR 178
+ PN +T+ + C+ G+ +HA + K+G S++ ++L+++Y CG + +A
Sbjct: 252 VHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAW 311
Query: 179 KLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKE 238
+F+ D V SM + I+ GL Q G +E
Sbjct: 312 TIFESTTEVDEV---SMTV----------------------------ILVGLAQNGSEEE 340
Query: 239 ALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVN 298
A++ F M Q V+ D +++VL ++ GK +HS + + + + L+N
Sbjct: 341 AIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLIN 400
Query: 299 MYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVT 358
MY KCG + + +F MP+++ +W +MI+ FA HG G A + EM VKP VT
Sbjct: 401 MYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVT 460
Query: 359 FVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSM 418
F+ LL AC+H GL+++GR + MK V+ IEP+ HY C++D+L RA L E+ I S+
Sbjct: 461 FLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSL 520
Query: 419 PMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAK 478
P++PD +W ALLG C HG+ E+GE A L P + + ++ + +IY G++
Sbjct: 521 PLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERA 580
Query: 479 RIRNLLKERRVQKKIPGCSMIEINGVVQEF 508
+ +K V K+ G S IEI F
Sbjct: 581 KTIKRMKAMGVTKET-GISSIEIEHKTHSF 609
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 189/428 (44%), Gaps = 44/428 (10%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
++K G A +F + D+ NI+ + + +R VL K+ML G F
Sbjct: 100 YAKCGKLVDAIKLFDEMPMRDVISQNIVFYGF-----LRNRETESGFVLLKRMLGSGGFD 154
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ T ++ C +++HA + G+ ++ GN LI Y CG + R +F
Sbjct: 155 HA-TLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVF 213
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
D M+ +N+I+ ++I+GL++ L ++ L
Sbjct: 214 D-------------------------------GMSHRNVITLTAVISGLIENELHEDGLR 242
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
LF M++ V P+ +T S L+AC+ I G+ +H+ L + GIE ++ I +AL++MY
Sbjct: 243 LFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYS 302
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KCG ++ A+ IFE E D + T ++ A +G +A F+ M +AGV+ +
Sbjct: 303 KCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSA 362
Query: 362 LLSACAHSGLVEQGRWCFD-VMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
+L + G+ V+KR + + ++++ S+ +S + R MP
Sbjct: 363 VLGVSFIDNSLGLGKQLHSLVIKRKF--SGNTFVNNGLINMYSKCGDLTDSQTVFRRMP- 419
Query: 421 EPDVYVWGALLGGCQMHGNVELGEKVALHLIDLE--PHNHAFYMNLCDIYGKAGRFDAAK 478
+ + W +++ HG+ K+ + LE P + F ++L G D +
Sbjct: 420 KRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTF-LSLLHACSHVGLIDKGR 478
Query: 479 RIRNLLKE 486
+ N +KE
Sbjct: 479 ELLNEMKE 486
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 144/473 (30%), Positives = 230/473 (48%), Gaps = 47/473 (9%)
Query: 61 SFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCD-GI 119
S+ K A +F + P++ + +I Y M + A+ +++KM D +
Sbjct: 73 SYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQN-----ALSMFQKMHEDRPV 127
Query: 120 FPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARK 179
PN TF + K C+ + G+ +HA++ G ++ +SL+++Y C + AR+
Sbjct: 128 PPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARR 187
Query: 180 LFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEA 239
+FD + IGY G+N++SW S+IT Q EA
Sbjct: 188 VFDSM------------IGY-----------------GRNVVSWTSMITAYAQNARGHEA 218
Query: 240 LELFHEMQQ--ISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALV 297
+ELF S + ++ +ASV+SAC+ LG + GK H + R G E + V+ T+L+
Sbjct: 219 IELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLL 278
Query: 298 NMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHV 357
+MY KCG + A +IF + ++T+MI A HGLG A F EM + PN+V
Sbjct: 279 DMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYV 338
Query: 358 TFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRS 417
T +G+L AC+HSGLV +G +M Y + P HY C+VD+L R DE+ L ++
Sbjct: 339 TLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKT 398
Query: 418 MPM--EPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFD 475
+ + E +WGALL ++HG VE+ + + LI + Y+ L + Y +G ++
Sbjct: 399 IEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWE 458
Query: 476 AAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAG-------GSSELPMKDL 521
++ +R L +R K CS IE V F AG G E +KDL
Sbjct: 459 DSESLR-LEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDL 510
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 34/269 (12%)
Query: 120 FPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARK 179
F + T FL+ + + A ++H +K GF SD F N L+ Y+ ++ ARK
Sbjct: 26 FFHLKTKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARK 85
Query: 180 LFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEA 239
LFDE+ +VV+W S++ GY G NAL +F+KM
Sbjct: 86 LFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKM------------------------ 121
Query: 240 LELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNM 299
HE + V P++ T ASV AC+ L GK +H+ L +G+ ++V+ ++LV+M
Sbjct: 122 ----HEDR--PVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDM 175
Query: 300 YGKCGLVQQAFEIFEEM--PEKDTSAWTAMISVFALHGLGWKAFDCFLEMERA--GVKPN 355
YGKC V+ A +F+ M ++ +WT+MI+ +A + G +A + F A + N
Sbjct: 176 YGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRAN 235
Query: 356 HVTFVGLLSACAHSGLVEQGRWCFDVMKR 384
++SAC+ G ++ G+ ++ R
Sbjct: 236 QFMLASVISACSSLGRLQWGKVAHGLVTR 264
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/366 (32%), Positives = 196/366 (53%), Gaps = 32/366 (8%)
Query: 145 VHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGG 204
VH+++V+FGF ++V +LIN+Y CG + A+++FD+
Sbjct: 259 VHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDT-------------------- 298
Query: 205 LDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSA 264
+ +NI +I+ Q +EAL LF +M V P++ T A +L++
Sbjct: 299 -----------HAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNS 347
Query: 265 CAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAW 324
A+L + G +H + ++G V++G ALVNMY K G ++ A + F M +D W
Sbjct: 348 IAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTW 407
Query: 325 TAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKR 384
MIS + HGLG +A + F M G PN +TF+G+L AC+H G VEQG F+ + +
Sbjct: 408 NTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMK 467
Query: 385 VYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGE 444
+ ++P + HY C+V LLS+A +F ++ +R+ P+E DV W LL C + N LG+
Sbjct: 468 KFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGK 527
Query: 445 KVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGV 504
KVA + I+ P++ Y+ L +I+ K+ ++ ++R+L+ R V+K+ PG S I I
Sbjct: 528 KVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKE-PGVSWIGIRNQ 586
Query: 505 VQEFSA 510
F A
Sbjct: 587 THVFLA 592
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 183/433 (42%), Gaps = 56/433 (12%)
Query: 16 NALSRLIEQCKN---LRELKRIHTQ-ILTSPNLHSSDQYHL--ITRLLFSCSFSKYGSFT 69
+ L+ L++ C N LR + IH I+T+ + + D Y + + L C +
Sbjct: 32 DRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRET-----V 86
Query: 70 YATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDG-IFPNCLTFPF 128
A +F ++ ++ + M++ Y G D + L+K M G PN
Sbjct: 87 RARKLFDLMPERNVVSWCAMMKGYQN-SGFD----FEVLKLFKSMFFSGESRPNEFVATV 141
Query: 129 LIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTD 188
+ K C+ G+ H +K+G +S F N+L+ +Y C A ++ D++P D
Sbjct: 142 VFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCD 201
Query: 189 VVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQ 248
+ ++S + GYL G LD+ RK ++ + WN+
Sbjct: 202 LSVFSSALSGYLECGAFKEGLDVLRKTANEDFV-WNN----------------------- 237
Query: 249 ISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQ 308
+T S L + L ++ VHS + R G +V AL+NMYGKCG V
Sbjct: 238 -------LTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLY 290
Query: 309 AFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAH 368
A +F++ ++ T ++ + +A + F +M+ V PN TF LL++ A
Sbjct: 291 AQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAE 350
Query: 369 SGLVEQGRWCFDVMKRVYLIEPQVYHYA---CMVDLLSRARLFDESVILIRSMPMEPDVY 425
L++QG D++ + L H +V++ +++ +++ M D+
Sbjct: 351 LSLLKQG----DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIV 405
Query: 426 VWGALLGGCQMHG 438
W ++ GC HG
Sbjct: 406 TWNTMISGCSHHG 418
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 121/271 (44%), Gaps = 38/271 (14%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ K G YA VF + ++ + ++ AY D+ F A+ L+ KM + P
Sbjct: 282 YGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAY-----FQDKSFEEALNLFSKMDTKEVPP 336
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
N TF L+ G+++H V+K G+ + V GN+L+N+Y G + +ARK F
Sbjct: 337 NEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAF 396
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
+ D+VTWN+M I+G GL +EALE
Sbjct: 397 SGMTFRDIVTWNTM-------------------------------ISGCSHHGLGREALE 425
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHG-KWVHSYLRRNGIECDVVIGTALVNMY 300
F M P++IT VL AC+ +G ++ G + + +++ ++ D+ T +V +
Sbjct: 426 AFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLL 485
Query: 301 GKCGLVQQAFEIFEEMP-EKDTSAWTAMISV 330
K G+ + A + P E D AW +++
Sbjct: 486 SKAGMFKDAEDFMRTAPIEWDVVAWRTLLNA 516
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/440 (30%), Positives = 220/440 (50%), Gaps = 47/440 (10%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDG--I 119
+ K G A VF + + DL ++N ++ +Y ++G+ D F L K M D
Sbjct: 187 YGKCGLIVEARRVFEAVLDRDLVLWNALVSSYV-LNGMIDEAFG----LLKLMGSDKNRF 241
Query: 120 FPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARK 179
+ TF L+ C G+ +HA + K + D+ +L+N+Y LS+AR+
Sbjct: 242 RGDYFTFSSLLSACRI----EQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARE 297
Query: 180 LFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEA 239
F+ SMV+ +N++SWN++I G Q G +EA
Sbjct: 298 CFE-----------SMVV--------------------RNVVSWNAMIVGFAQNGEGREA 326
Query: 240 LELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNM 299
+ LF +M +++PD++T ASVLS+CA+ AI K V + + + G + + +L++
Sbjct: 327 MRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISS 386
Query: 300 YGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
Y + G + +A F + E D +WT++I A HG ++ F M + ++P+ +TF
Sbjct: 387 YSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITF 445
Query: 360 VGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP 419
+ +LSAC+H GLV++G CF M Y IE + HY C++DLL RA DE+ ++ SMP
Sbjct: 446 LEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMP 505
Query: 420 MEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKR 479
EP + A GGC +H E + A L+++EP Y L + Y G ++ A
Sbjct: 506 TEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAAL 565
Query: 480 IRNLLKERR--VQKKIPGCS 497
+R +ERR K PGCS
Sbjct: 566 LRK--RERRNCYNPKTPGCS 583
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 200/465 (43%), Gaps = 85/465 (18%)
Query: 61 SFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF 120
+++K F A +F + ++ +NI+I DG + ++L +
Sbjct: 80 AYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVS 139
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
+ ++F LI+ CT + +G +H +VK G S F SL++ Y CGL+ AR++
Sbjct: 140 LDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRV 199
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKM-NGKNIISWNSIITGLVQGGLAKEA 239
F+ + D+V WN++V Y+ NG +D A L + M + KN
Sbjct: 200 FEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKN-------------------- 239
Query: 240 LELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNM 299
+ D T +S+LSAC I+ GK +H+ L + + D+ + TAL+NM
Sbjct: 240 ----------RFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNM 285
Query: 300 YGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
Y K + A E FE M ++ +W AMI FA +G G +A F +M ++P+ +TF
Sbjct: 286 YAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTF 345
Query: 360 VGLLSACA-----------------------------------HSGLVEQGRWCFDVMKR 384
+LS+CA +G + + CF ++
Sbjct: 346 ASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR- 404
Query: 385 VYLIEPQVYHYACMVDLLSRARLFDESVILIRSM--PMEPDVYVWGALLGGCQMHGNVEL 442
EP + + ++ L+ +ES+ + SM ++PD + +L C G V+
Sbjct: 405 ----EPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQE 460
Query: 443 GEK-----VALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRN 482
G + + I+ E + Y L D+ G+AG D A + N
Sbjct: 461 GLRCFKRMTEFYKIEAEDEH---YTCLIDLLGRAGFIDEASDVLN 502
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 217/435 (49%), Gaps = 37/435 (8%)
Query: 64 KYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNC 123
+ G +F I P + +N M+ Y+ + H+ A+ +++M + P+
Sbjct: 362 RSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYE-----HYEEAISNFRQMQFQNLKPDK 416
Query: 124 LTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDE 183
T ++ C R G+ +H V++ + + LI +Y C + + +FD+
Sbjct: 417 TTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDD 476
Query: 184 IPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELF 243
+N +I WNS+I+G L +AL LF
Sbjct: 477 C------------------------------INELDIACWNSMISGFRHNMLDTKALILF 506
Query: 244 HEMQQISVK-PDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGK 302
M Q +V P++ + A+VLS+C++L ++ HG+ H + ++G D + TAL +MY K
Sbjct: 507 RRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCK 566
Query: 303 CGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGL 362
CG + A + F+ + K+T W MI + +G G +A + +M +G KP+ +TFV +
Sbjct: 567 CGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSV 626
Query: 363 LSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEP 422
L+AC+HSGLVE G M+R++ IEP++ HY C+VD L RA +++ L + P +
Sbjct: 627 LTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKS 686
Query: 423 DVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRN 482
+W LL C++HG+V L +VA L+ L+P + A Y+ L + Y ++D + ++
Sbjct: 687 SSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQG 746
Query: 483 LLKERRVQKKIPGCS 497
L+ + RV K PG S
Sbjct: 747 LMNKNRVH-KTPGQS 760
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 195/446 (43%), Gaps = 56/446 (12%)
Query: 48 DQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRA 107
D Y L F C K G A VF + D+ +N MI G +++ A
Sbjct: 71 DVYSWNAFLTFRC---KVGDLGEACEVFDGMPERDVVSWNNMISVLV-RKGFEEK----A 122
Query: 108 MVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINL 167
+V+YK+M+CDG P+ T ++ C++ +DG G H VK G ++F GN+L+++
Sbjct: 123 LVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSM 182
Query: 168 YMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSII 227
Y CG + +D + +F ++ N +S+ ++I
Sbjct: 183 YAKCGFI------------------------------VDYGVRVFESLSQPNEVSYTAVI 212
Query: 228 TGLVQGGLAKEALELFHEMQQISVKPDKITIASVLS------ACAQLGAI---DHGKWVH 278
GL + EA+++F M + V+ D + ++++LS C L I + GK +H
Sbjct: 213 GGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIH 272
Query: 279 SYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGW 338
R G D+ + +L+ +Y K + A IF EMPE + +W MI F
Sbjct: 273 CLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSD 332
Query: 339 KAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACM 398
K+ + M +G +PN VT + +L AC SG VE GR F + +P V + M
Sbjct: 333 KSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP-----QPSVSAWNAM 387
Query: 399 VDLLSRARLFDESVILIRSMP---MEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLE- 454
+ S ++E++ R M ++PD +L C +E G+++ +I E
Sbjct: 388 LSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEI 447
Query: 455 PHNHAFYMNLCDIYGKAGRFDAAKRI 480
N L +Y + + + ++ I
Sbjct: 448 SKNSHIVSGLIAVYSECEKMEISECI 473
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 129/228 (56%), Gaps = 1/228 (0%)
Query: 141 SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYL 200
SG+++H +V+ G SD + N L++LY+ CG ARK+FDE+ V DV +WN+ +
Sbjct: 24 SGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 201 RNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIAS 260
+ G L A ++F M ++++SWN++I+ LV+ G ++AL ++ M P + T+AS
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 261 VLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCG-LVQQAFEIFEEMPEK 319
VLSAC+++ G H + G++ ++ +G AL++MY KCG +V +FE + +
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 320 DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACA 367
+ ++TA+I A +A F M GV+ + V +LS A
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISA 251
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 216/495 (43%), Gaps = 92/495 (18%)
Query: 70 YATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGI------FPNC 123
Y VF ++ P+ Y +I A + V A+ +++ M G+ N
Sbjct: 192 YGVRVFESLSQPNEVSYTAVIGGLARENKV-----LEAVQMFRLMCEKGVQVDSVCLSNI 246
Query: 124 LTFPFLIKGCTRWMD---GASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
L+ +GC + G+ +H ++ GF D+ NSL+ +Y ++ A +
Sbjct: 247 LSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELI 306
Query: 181 FDEIPVTDVVTWNSMVIGY-----------------------------------LRNGGL 205
F E+P +VV+WN M++G+ R+G +
Sbjct: 307 FAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDV 366
Query: 206 DNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSAC 265
+ +F + ++ +WN++++G +EA+ F +MQ ++KPDK T++ +LS+C
Sbjct: 367 ETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426
Query: 266 AQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEE-MPEKDTSAW 324
A+L ++ GK +H + R I + I + L+ +Y +C ++ + IF++ + E D + W
Sbjct: 427 ARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACW 486
Query: 325 TAMISVFALHGLGWKAFDCFLEMERAGVK-PNHVTFVGLLSACAHSGLVEQGRWCFD-VM 382
+MIS F + L KA F M + V PN +F +LS+C+ + GR V+
Sbjct: 487 NSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVV 546
Query: 383 KRVYL----IEPQVYHYACMVDLLSRARLF-------------------------DESVI 413
K Y+ +E + C + AR F DE+V
Sbjct: 547 KSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVG 606
Query: 414 LIRSM---PMEPDVYVWGALLGGCQMHGNVELGEKV-----ALHLIDLEPHNHAFYMNLC 465
L R M +PD + ++L C G VE G ++ +H I+ E + Y+ +
Sbjct: 607 LYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDH---YICIV 663
Query: 466 DIYGKAGRFDAAKRI 480
D G+AGR + A+++
Sbjct: 664 DCLGRAGRLEDAEKL 678
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 150/334 (44%), Gaps = 60/334 (17%)
Query: 15 KNALSRLIEQCKNLREL---KRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYA 71
K LS ++ C LR L K+IH ++ + S H+++ L+ +S+ +
Sbjct: 416 KTTLSVILSSCARLRFLEGGKQIHGVVIRT---EISKNSHIVSGLI--AVYSECEKMEIS 470
Query: 72 TNVFH-MINNPDLRVYNIMIRAYAGMDGVDDRHF---CRAMVLYKKMLCDGIF-PNCLTF 126
+F IN D+ +N MI + RH +A++L+++M + PN +F
Sbjct: 471 ECIFDDCINELDIACWNSMISGF--------RHNMLDTKALILFRRMHQTAVLCPNETSF 522
Query: 127 PFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPV 186
++ C+R G H VVK G++SD F +L ++Y CG + +AR+ FD +
Sbjct: 523 ATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLR 582
Query: 187 TDVVTWNSMVIGYLRNGGLDNALDLFRKM----NGKNIISWNSIITGLVQGGLAKEALEL 242
+ V WN M+ GY NG D A+ L+RKM + I++ S++T GL + LE+
Sbjct: 583 KNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEI 642
Query: 243 FHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGK 302
MQ+I +GIE ++ +V+ G+
Sbjct: 643 LSSMQRI----------------------------------HGIEPELDHYICIVDCLGR 668
Query: 303 CGLVQQAFEIFEEMPEKDTSA-WTAMISVFALHG 335
G ++ A ++ E P K +S W ++S +HG
Sbjct: 669 AGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHG 702
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 154/520 (29%), Positives = 245/520 (47%), Gaps = 62/520 (11%)
Query: 36 TQILTSPNLHSSDQYH-LITRLLFSCSF-------SKYG------SFTYATNVFHMINNP 81
+ +LTS Q H L +L CS S YG + A VF I
Sbjct: 165 SSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFK 224
Query: 82 DLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGAS 141
+L +N MI A+ + +A+ ++ +M DG+ + T + + D
Sbjct: 225 NLVTWNSMIAAFQCCNLGK-----KAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVP 279
Query: 142 GEI------VHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSM 195
E+ +H+ VK G ++ +LI +Y + M
Sbjct: 280 NEVSKCCLQLHSLTVKSGLVTQTEVATALIKVY------------------------SEM 315
Query: 196 VIGYLRNGGLDNALDLFRKMNG-KNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPD 254
+ Y + LF +M+ ++I++WN IIT + A+ LF +++Q + PD
Sbjct: 316 LEDY------TDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPD 368
Query: 255 KITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFE 314
T +SVL ACA L H +H+ + + G D V+ +L++ Y KCG + +F+
Sbjct: 369 WYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFD 428
Query: 315 EMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQ 374
+M +D +W +M+ ++LHG F +M+ + P+ TF+ LLSAC+H+G VE+
Sbjct: 429 DMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDSATFIALLSACSHAGRVEE 485
Query: 375 GRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGC 434
G F M PQ+ HYAC++D+LSRA F E+ +I+ MPM+PD VW ALLG C
Sbjct: 486 GLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSC 545
Query: 435 QMHGNVELGEKVALHLIDL-EPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKI 493
+ HGN LG+ A L +L EP N Y+ + +IY G F+ A ++ RV+K+
Sbjct: 546 RKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKE- 604
Query: 494 PGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNEMK 533
P S EI V EF++GG + + L RL + +K
Sbjct: 605 PDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLK 644
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 111/246 (45%), Gaps = 41/246 (16%)
Query: 125 TFPFLIKGCTRWMDGASGEIVHAQVVK--FGFLSDVFNGNSLINLYMTCGLLSNARKLFD 182
+ L + C + G +H ++ + + +V N LIN+Y CG + AR++FD
Sbjct: 61 AYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFD 120
Query: 183 EIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALEL 242
M +N++SW ++ITG VQ G +E L
Sbjct: 121 -------------------------------TMPERNVVSWTALITGYVQAGNEQEGFCL 149
Query: 243 FHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGK 302
F M P++ T++SVL++C + GK VH + G+ C + + A+++MYG+
Sbjct: 150 FSSMLSHCF-PNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGR 204
Query: 303 C---GLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
C +A+ +FE + K+ W +MI+ F LG KA F+ M GV + T
Sbjct: 205 CHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATL 264
Query: 360 VGLLSA 365
+ + S+
Sbjct: 265 LNICSS 270
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 117/521 (22%), Positives = 211/521 (40%), Gaps = 85/521 (16%)
Query: 4 ISLIESKSLTLKN--ALSRLIEQC---KNLRELKRIHTQILTSPNLHSSDQYHLITRLLF 58
+SL S + L++ A + L + C +NL + +H +L+ P +S Q ++ L
Sbjct: 46 VSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYS--QNVILANFLI 103
Query: 59 SCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDG 118
+ ++K G+ YA VF + ++ + +I Y G + FC L+ ML
Sbjct: 104 NM-YAKCGNILYARQVFDTMPERNVVSWTALITGYV-QAGNEQEGFC----LFSSML-SH 156
Query: 119 IFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTC---GLLS 175
FPN T ++ C G+ VH +K G ++ N++I++Y C
Sbjct: 157 CFPNEFTLSSVLTSCRY----EPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAY 212
Query: 176 NARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGL 235
A +F+ I ++VTWNSM+ + A+ +F +M+ + G + L
Sbjct: 213 EAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGV--------GFDRATL 264
Query: 236 AKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTA 295
L+ K + V C QL HS ++G+ + TA
Sbjct: 265 LNICSSLY--------KSSDLVPNEVSKCCLQL---------HSLTVKSGLVTQTEVATA 307
Query: 296 LVNMYGK-CGLVQQAFEIFEEMPE-KDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVK 353
L+ +Y + +++F EM +D AW +I+ FA++ +A F ++ + +
Sbjct: 308 LIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPE-RAIHLFGQLRQEKLS 366
Query: 354 PNHVTFVGLLSACA-----------HSGLVEQGRWC-----------------FDVMKRV 385
P+ TF +L ACA H+ +++ G D+ RV
Sbjct: 367 PDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRV 426
Query: 386 Y--LIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELG 443
+ + V + M+ S D + + + M + PD + ALL C G VE G
Sbjct: 427 FDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALLSACSHAGRVEEG 486
Query: 444 EKVALHLID----LEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
++ + + L NH Y + D+ +A RF A+ +
Sbjct: 487 LRIFRSMFEKPETLPQLNH--YACVIDMLSRAERFAEAEEV 525
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 230 LVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGI--E 287
LV+ G + A+ LF+ + ++ + A++ ACA+ + G +H ++ +
Sbjct: 36 LVRSGDIRRAVSLFYS-APVELQSQQ-AYAALFQACAEQRNLLDGINLHHHMLSHPYCYS 93
Query: 288 CDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEM 347
+V++ L+NMY KCG + A ++F+ MPE++ +WTA+I+ + G + F C
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGF-CLFSS 152
Query: 348 ERAGVKPNHVTFVGLLSACAH 368
+ PN T +L++C +
Sbjct: 153 MLSHCFPNEFTLSSVLTSCRY 173
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 147/537 (27%), Positives = 249/537 (46%), Gaps = 79/537 (14%)
Query: 45 HSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHF 104
+ ++H++ L F K G A ++F + + D+ + MI YA + +
Sbjct: 39 YKPKKHHILATNLIVSYFEK-GLVEEARSLFDEMPDRDVVAWTAMITGYASSN-----YN 92
Query: 105 CRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSL 164
RA + +M+ G PN T ++K C A G +VH VVK G ++ N++
Sbjct: 93 ARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAM 152
Query: 165 INLYMTCGLLSNARKL-FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKM-------- 215
+N+Y TC + A L F +I V + VTW +++ G+ G L ++++M
Sbjct: 153 MNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVT 212
Query: 216 ------------------NGK-------------NIISWNSIITGLVQGGLAKEALELFH 244
GK N+ NSI+ + G EA FH
Sbjct: 213 PYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFH 272
Query: 245 EMQQISV------------------------------KPDKITIASVLSACAQLGAIDHG 274
EM+ + P+ T S+++ACA + A++ G
Sbjct: 273 EMEDKDLITWNTLISELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCG 332
Query: 275 KWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPE-KDTSAWTAMISVFAL 333
+ +H + R G +V + AL++MY KCG + + +F E+ + ++ +WT+M+ +
Sbjct: 333 QQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGS 392
Query: 334 HGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVY 393
HG G +A + F +M +G++P+ + F+ +LSAC H+GLVE+G F+VM+ Y I P
Sbjct: 393 HGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRD 452
Query: 394 HYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALH-LID 452
Y C+VDLL RA E+ L+ MP +PD WGA+LG C+ H + L ++A +++
Sbjct: 453 IYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVME 512
Query: 453 LEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFS 509
L+P Y+ L IY G++ R+R +++ KK G S I + V F+
Sbjct: 513 LKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMR-MMGNKKEAGMSWILVENQVFSFA 568
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 16/172 (9%)
Query: 276 WVHSYLRRNGIECDV-------------VIGTALVNMYGKCGLVQQAFEIFEEMPEKDTS 322
+V S LR G+E ++ T L+ Y + GLV++A +F+EMP++D
Sbjct: 18 FVRSSLRNAGVESSQNTEYPPYKPKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVV 77
Query: 323 AWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVM 382
AWTAMI+ +A +A++CF EM + G PN T +L +C + ++ G V+
Sbjct: 78 AWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVV 137
Query: 383 KRVYLIEPQVYHYACMVDLLSRARLFDESVILI-RSMPMEPDVYVWGALLGG 433
++ + E +Y M+++ + + E+ LI R + ++ DV W L+ G
Sbjct: 138 VKLGM-EGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDV-TWTTLITG 187
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 182/315 (57%), Gaps = 5/315 (1%)
Query: 188 DVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQ 247
D N+++ Y R +++A+ +F ++ N+ SWN +I+ L Q +E +LF ++
Sbjct: 615 DTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK 674
Query: 248 QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQ 307
++P++IT +LSA QLG+ +G H +L R G + + + ALV+MY CG+++
Sbjct: 675 ---LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLE 731
Query: 308 QAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEME-RAGVKPNHVTFVGLLSAC 366
++F SAW ++IS HG+G KA + F E+ + ++PN +F+ LLSAC
Sbjct: 732 TGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSAC 791
Query: 367 AHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYV 426
+HSG +++G + M+ + ++P H +VD+L RA E+ I + V
Sbjct: 792 SHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGV 851
Query: 427 WGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKE 486
WGALL C HG+ +LG++VA L ++EP N ++Y++L + Y G ++ A R+R ++++
Sbjct: 852 WGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVED 911
Query: 487 RRVQKKIPGCSMIEI 501
+ KK+PG S+I++
Sbjct: 912 NAL-KKLPGYSVIDV 925
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 120/514 (23%), Positives = 212/514 (41%), Gaps = 90/514 (17%)
Query: 17 ALSRLIEQCKNLREL---KRIHTQILTS---PNLHSSDQYHLITRLLFSCSFSKYGSFTY 70
S +I C ++ EL + +H ++ S P H S +I+ +SK G
Sbjct: 291 TFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISM------YSKCGDTEA 344
Query: 71 ATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLI 130
A VF + D+ N ++ +A +G+ + F +L + D I P+ T +
Sbjct: 345 AETVFEELVCRDVISSNAILNGFAA-NGMFEEAFG---ILNQMQSVDKIQPDIATVVSIT 400
Query: 131 KGCTRWMDGASGEIVHAQVVKFGFLSDVFNG-NSLINLYMTCGLLSNARKLFDEIPVTDV 189
C G VH V+ S NS+I++Y CGL + A LF D+
Sbjct: 401 SICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDL 460
Query: 190 VTWNSMVIGYLRN----------------------------------------------- 202
V+WNSM+ + +N
Sbjct: 461 VSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVH 520
Query: 203 ------GGLDNALDLFRKMN-GKNIISWNSIITGLVQGGLAKEALELFHEM-QQISVKPD 254
G L +A M+ +++ SWNS+I+G G E+L F M ++ ++ D
Sbjct: 521 CWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHD 580
Query: 255 KITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFE 314
IT+ +SA LG + G+ H ++ E D + L+ MYG+C ++ A ++F
Sbjct: 581 LITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFG 640
Query: 315 EMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQ 374
+ + + +W +IS + + G + F F ++ ++PN +TFVGLLSA G
Sbjct: 641 LISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSY 697
Query: 375 GRWCF-DVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGG 433
G +++R + P V A +VD+ S + + + + R+ + + W +++
Sbjct: 698 GMQAHCHLIRRGFQANPFV--SAALVDMYSSCGMLETGMKVFRNSGVN-SISAWNSVISA 754
Query: 434 CQMHGNVELGEKVALHLI-------DLEPHNHAF 460
HG +GEK A+ L ++EP+ +F
Sbjct: 755 HGFHG---MGEK-AMELFKELSSNSEMEPNKSSF 784
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 176/385 (45%), Gaps = 64/385 (16%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYN-IMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF 120
++K + + A VF + + D+ +N IM + A + H +++ +K M G
Sbjct: 233 YAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLA------NGHPRKSLQYFKSMTGSGQE 286
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSD--VFNGNSLINLYMTCGLLSNAR 178
+ +TF +I C+ + GE +H V+K G+ + V GNS+I++Y C
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKC------- 339
Query: 179 KLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKE 238
G + A +F ++ +++IS N+I+ G G+ +E
Sbjct: 340 ------------------------GDTEAAETVFEELVCRDVISSNAILNGFAANGMFEE 375
Query: 239 ALELFHEMQQI-SVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVV-IGTAL 296
A + ++MQ + ++PD T+ S+ S C L G+ VH Y R ++ + + ++
Sbjct: 376 AFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSV 435
Query: 297 VNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEM--ERAGVKP 354
++MYGKCGL QA +F+ +D +W +MIS F+ +G KA + F E+ E + K
Sbjct: 436 IDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKF 495
Query: 355 NHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVIL 414
+ T + +L++C S + G+ +++ + DL S + +
Sbjct: 496 SLSTVLAILTSCDSSDSLIFGKSVHCWLQK-------------LGDLTS-------AFLR 535
Query: 415 IRSMPMEPDVYVWGALLGGCQMHGN 439
+ +M D+ W +++ GC G+
Sbjct: 536 LETMSETRDLTSWNSVISGCASSGH 560
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 129/256 (50%), Gaps = 4/256 (1%)
Query: 186 VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHE 245
V D N+++ Y + L +A +F M ++I+SWN+I+T + G +++L+ F
Sbjct: 220 VGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKS 279
Query: 246 MQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGI--ECDVVIGTALVNMYGKC 303
M + D +T + V+SAC+ + + G+ +H + ++G E V +G ++++MY KC
Sbjct: 280 MTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKC 339
Query: 304 GLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAG-VKPNHVTFVGL 362
G + A +FEE+ +D + A+++ FA +G+ +AF +M+ ++P+ T V +
Sbjct: 340 GDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSI 399
Query: 363 LSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEP 422
S C +GR R+ + + ++D+ + L ++ +L ++
Sbjct: 400 TSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKT-TTHR 458
Query: 423 DVYVWGALLGGCQMHG 438
D+ W +++ +G
Sbjct: 459 DLVSWNSMISAFSQNG 474
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 131/283 (46%), Gaps = 43/283 (15%)
Query: 71 ATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLI 130
A VF +I++P+L +N +I A + ++ L++ + + PN +TF L+
Sbjct: 635 AVKVFGLISDPNLCSWNCVISALS-----QNKAGREVFQLFRNLKLE---PNEITFVGLL 686
Query: 131 KGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVV 190
T+ + G H +++ GF ++ F +L+++Y +CG+L K+F V +
Sbjct: 687 SASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSIS 746
Query: 191 TWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQIS 250
WNS++ + +G + A++LF++++ + EM+
Sbjct: 747 AWNSVISAHGFHGMGEKAMELFKELSSNS-------------------------EME--- 778
Query: 251 VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRN-GIECDVVIGTALVNMYGKCGLVQQA 309
P+K + S+LSAC+ G ID G + + G++ +V+M G+ G +++A
Sbjct: 779 --PNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREA 836
Query: 310 FEIFEEMPE-KDTSAWTAMISVFALHG---LGWKAFDCFLEME 348
+E + E + W A++S HG LG + + EME
Sbjct: 837 YEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEME 879
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%)
Query: 188 DVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQ 247
D+ T + ++ Y R G L ++ LF ++ K++I WNS+IT L Q G A+ LF EM
Sbjct: 121 DLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMI 180
Query: 248 QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQ 307
+ D T+ SA + L +H G+ D + AL+N+Y K +
Sbjct: 181 HKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLS 240
Query: 308 QAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACA 367
A +F M +D +W +++ +G K+ F M +G + + VTF ++SAC+
Sbjct: 241 SAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACS 300
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/316 (36%), Positives = 169/316 (53%), Gaps = 36/316 (11%)
Query: 193 NSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVK 252
N++V Y + G +D+AL +F M K++ISW +++TG G EAL+LF M+ +
Sbjct: 368 NALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGIT 427
Query: 253 PDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEI 312
PDKI ASVLSA A+L ++ G+ VH ++G + + +LV MY KCG ++ A I
Sbjct: 428 PDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVI 487
Query: 313 FEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLV 372
F M +D WT +I +G+ A +GL+
Sbjct: 488 FNSMEIRDLITWTCLI-------VGY----------------------------AKNGLL 512
Query: 373 EQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLG 432
E + FD M+ VY I P HYACM+DL R+ F + L+ M +EPD VW A+L
Sbjct: 513 EDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILA 572
Query: 433 GCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKK 492
+ HGN+E GE+ A L++LEP+N Y+ L ++Y AGR D A +R L+K R + K+
Sbjct: 573 ASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKE 632
Query: 493 IPGCSMIEINGVVQEF 508
PGCS +E G V F
Sbjct: 633 -PGCSWVEEKGKVHSF 647
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 154/284 (54%), Gaps = 9/284 (3%)
Query: 159 FNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK 218
+ N L+ G + AR++FD++P D TWN+M++ Y + L +A LFR K
Sbjct: 29 LHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVK 88
Query: 219 NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVH 278
N ISWN++I+G + G EA LF EMQ +KP++ T+ SVL C L + G+ +H
Sbjct: 89 NTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIH 148
Query: 279 SYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMP-EKDTSAWTAMISVFALHGLG 337
+ + G + DV + L+ MY +C + +A +FE M EK+ WT+M++ ++ +G
Sbjct: 149 GHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFA 208
Query: 338 WKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQG---RWCFDVMKRVYLIEPQVYH 394
+KA +CF ++ R G + N TF +L+ACA G C ++K + + +Y
Sbjct: 209 FKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCC--IVKSGF--KTNIYV 264
Query: 395 YACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHG 438
+ ++D+ ++ R + + L+ M ++ DV W +++ GC G
Sbjct: 265 QSALIDMYAKCREMESARALLEGMEVD-DVVSWNSMIVGCVRQG 307
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 186/429 (43%), Gaps = 67/429 (15%)
Query: 44 LHS-SDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDR 102
+HS +D+ L + LL SK G A +F + D +N MI AY+ + D
Sbjct: 20 IHSYADRTKLHSNLLLG-DLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDA 78
Query: 103 H--------------------FCR------AMVLYKKMLCDGIFPNCLTFPFLIKGCTRW 136
+C+ A L+ +M DGI PN T +++ CT
Sbjct: 79 EKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSL 138
Query: 137 MDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMV 196
+ GE +H +K GF DV N L+ +Y C +S A LF+
Sbjct: 139 VLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFE-------------- 184
Query: 197 IGYLRNGGLDNALDLFRKMNG-KNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDK 255
M G KN ++W S++TG Q G A +A+E F ++++ + ++
Sbjct: 185 -----------------TMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQ 227
Query: 256 ITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEE 315
T SVL+ACA + A G VH + ++G + ++ + +AL++MY KC ++ A + E
Sbjct: 228 YTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEG 287
Query: 316 MPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGL---V 372
M D +W +MI GL +A F M +K + T +L+ A S +
Sbjct: 288 MEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKI 347
Query: 373 EQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLG 432
C ++K Y V + +VD+ ++ + D ++ + M +E DV W AL+
Sbjct: 348 ASSAHCL-IVKTGYATYKLVNN--ALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVT 403
Query: 433 GCQMHGNVE 441
G +G+ +
Sbjct: 404 GNTHNGSYD 412
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 183/393 (46%), Gaps = 49/393 (12%)
Query: 106 RAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLI 165
+A+ ++ + +G N TFP ++ C G VH +VK GF ++++ ++LI
Sbjct: 210 KAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALI 269
Query: 166 NLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNS 225
++Y C + +AR L + + V DVV SWNS
Sbjct: 270 DMYAKCREMESARALLEGMEVDDVV-------------------------------SWNS 298
Query: 226 IITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDH--GKWVHSYLRR 283
+I G V+ GL EAL +F M + +K D TI S+L+ C L + H + +
Sbjct: 299 MIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILN-CFALSRTEMKIASSAHCLIVK 357
Query: 284 NGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDC 343
G ++ ALV+MY K G++ A ++FE M EKD +WTA+++ +G +A
Sbjct: 358 TGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKL 417
Query: 344 FLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCF-DVMKRVYLIEPQVYHYACMVDLL 402
F M G+ P+ + +LSA A L+E G+ + +K + V + +V +
Sbjct: 418 FCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNN--SLVTMY 475
Query: 403 SRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKV-----ALHLIDLEPHN 457
++ +++ ++ SM + D+ W L+ G +G +E ++ ++ I P +
Sbjct: 476 TKCGSLEDANVIFNSMEIR-DLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEH 534
Query: 458 HAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQ 490
+A + D++G++G F ++ LL + V+
Sbjct: 535 YAC---MIDLFGRSGDF---VKVEQLLHQMEVE 561
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 123/279 (44%), Gaps = 17/279 (6%)
Query: 50 YHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMV 109
Y L+ L ++K G A VF + D+ + ++ D+ A+
Sbjct: 363 YKLVNNALVDM-YAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDE-----ALK 416
Query: 110 LYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYM 169
L+ M GI P+ + ++ G+ VH +K GF S + NSL+ +Y
Sbjct: 417 LFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYT 476
Query: 170 TCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIIS-----WN 224
CG L +A +F+ + + D++TW +++GY +NG L++A F M I+ +
Sbjct: 477 KCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYA 536
Query: 225 SIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRN 284
+I + G + +L H+M+ V+PD ++L+A + G I++G+ L
Sbjct: 537 CMIDLFGRSGDFVKVEQLLHQME---VEPDATVWKAILAASRKHGNIENGERAAKTLME- 592
Query: 285 GIEC-DVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTS 322
+E + V L NMY G +A + M ++ S
Sbjct: 593 -LEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNIS 630
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 192/376 (51%), Gaps = 13/376 (3%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
++K G+ + F I + ++ +N ++ YA DG C + L+ +ML G P
Sbjct: 361 YAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDG----PIC--LSLFLQMLQMGFRP 414
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
TF +K C + +H+ +V+ G+ + + +SL+ Y L+++A L
Sbjct: 415 TEYTFSTALKSCCV----TELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLL 470
Query: 182 DEIP-VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
D T VV N + Y R G ++ L + + +SWN I + +E +
Sbjct: 471 DWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVI 530
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIEC-DVVIGTALVNM 299
ELF M Q +++PDK T S+LS C++L + G +H + + C D + L++M
Sbjct: 531 ELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDM 590
Query: 300 YGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
YGKCG ++ ++FEE EK+ WTA+IS +HG G +A + F E G KP+ V+F
Sbjct: 591 YGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSF 650
Query: 360 VGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP 419
+ +L+AC H G+V++G F MK Y +EP++ HY C VDLL+R E+ LIR MP
Sbjct: 651 ISILTACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMP 709
Query: 420 MEPDVYVWGALLGGCQ 435
D VW L GC
Sbjct: 710 FPADAPVWRTFLDGCN 725
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 161/373 (43%), Gaps = 41/373 (10%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ K G + A VF + + +N +I+ Y+ VD +A ++ +M G P
Sbjct: 59 YEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVD-----KAWGVFSEMRYFGYLP 113
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFG-FLSDVFNGNSLINLYMTCGLLSNARKL 180
N T L+ + +D +G +H +K+G F++D F G L+ LY LL A ++
Sbjct: 114 NQSTVSGLLSCAS--LDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQV 171
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
F+++P K++ +WN +++ L G KE +
Sbjct: 172 FEDMPF-------------------------------KSLETWNHMMSLLGHRGFLKECM 200
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
F E+ ++ + + VL + + +D K +H + G++C++ + +L++ Y
Sbjct: 201 FFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAY 260
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
GKCG A +F++ D +W A+I A KA F+ M G PN T+V
Sbjct: 261 GKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYV 320
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
+L + L+ GR ++ + E + ++D ++ ++S + +
Sbjct: 321 SVLGVSSLVQLLSCGRQIHGMLIK-NGCETGIVLGNALIDFYAKCGNLEDSRLCFDYI-R 378
Query: 421 EPDVYVWGALLGG 433
+ ++ W ALL G
Sbjct: 379 DKNIVCWNALLSG 391
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 138/309 (44%), Gaps = 33/309 (10%)
Query: 188 DVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQ 247
++ NS++ Y + G A +F+ +I+SWN+II + +AL+LF M
Sbjct: 249 EISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMP 308
Query: 248 QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQ 307
+ P++ T SVL + + + G+ +H L +NG E +V+G AL++ Y KCG ++
Sbjct: 309 EHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLE 368
Query: 308 QAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACA 367
+ F+ + +K+ W A++S +A + G FL+M + G +P TF L +C
Sbjct: 369 DSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC 427
Query: 368 -------HSGLVEQG----RWCFDVMKRVYLIEPQVYHYACMVD---------------- 400
HS +V G + + R Y + ++D
Sbjct: 428 VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAG 487
Query: 401 LLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLI--DLEPHNH 458
+ SR + ESV LI ++ +PD W + C E ++ H++ ++ P +
Sbjct: 488 IYSRRGQYHESVKLISTLE-QPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKY 546
Query: 459 AFY--MNLC 465
F ++LC
Sbjct: 547 TFVSILSLC 555
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 111/238 (46%), Gaps = 36/238 (15%)
Query: 129 LIKGCTRWMDGASGEIVHAQVVKFG--FLSDVFNGNSLINLYMTCGLLSNARKLFDEIPV 186
L+ C + A + +HA + L V+ N++I+LY G +S A K+FD++P
Sbjct: 18 LLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPE 77
Query: 187 TDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEM 246
+ V++N+++ GY + G +D A W +F EM
Sbjct: 78 RNKVSFNTIIKGYSKYGDVDKA--------------WG-----------------VFSEM 106
Query: 247 QQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGI-ECDVVIGTALVNMYGKCGL 305
+ P++ T++ +LS CA L + G +H + G+ D +GT L+ +YG+ L
Sbjct: 107 RYFGYLPNQSTVSGLLS-CASLD-VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDL 164
Query: 306 VQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLL 363
++ A ++FE+MP K W M+S+ G + F E+ R G +F+G+L
Sbjct: 165 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVL 222
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/410 (19%), Positives = 159/410 (38%), Gaps = 74/410 (18%)
Query: 61 SFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF 120
++ K G+ A +F + D+ +N +I A A + +A+ L+ M G
Sbjct: 259 AYGKCGNTHMAERMFQDAGSWDIVSWNAIICATA-----KSENPLKALKLFVSMPEHGFS 313
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
PN T+ ++ + + G +H ++K G + + GN+LI+ Y CG L ++R
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLC 373
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
FD I ++V WN+++ GY G L
Sbjct: 374 FDYIRDKNIVCWNALLSGYANKDG--------------------------------PICL 401
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
LF +M Q+ +P + T ++ L +C + + +HS + R G E + + ++L+ Y
Sbjct: 402 SLFLQMLQMGFRPTEYTFSTALKSC----CVTELQQLHSVIVRMGYEDNDYVLSSLMRSY 457
Query: 301 GKCGLVQQAF--------------------------------EIFEEMPEKDTSAWTAMI 328
K L+ A ++ + + DT +W I
Sbjct: 458 AKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAI 517
Query: 329 SVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLI 388
+ + + + F M ++ ++P+ TFV +LS C+ + G ++ +
Sbjct: 518 AACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFS 577
Query: 389 EPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHG 438
+ ++D+ + SV+ + E ++ W AL+ +HG
Sbjct: 578 CADTFVCNVLIDMYGKCGSI-RSVMKVFEETREKNLITWTALISCLGIHG 626
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 258 IASVLSACAQLGAIDHGKWVH--SYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEE 315
+ S+L+ C + + K +H S + + V + ++++Y K G V A ++F++
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 316 MPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQG 375
MPE++ ++ +I ++ +G KA+ F EM G PN T GLLS CA S V G
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS-CA-SLDVRAG 132
Query: 376 RWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME 421
+ + L + C++ L R L + + + MP +
Sbjct: 133 TQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFK 178
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 224/443 (50%), Gaps = 23/443 (5%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ ++G A +F ++ D +N +I Y + + + A L +M G+
Sbjct: 229 YKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE-----AFKLLDRMYLSGVEA 283
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLS-DVFNGN-SLINLYMTCGLLSNAR- 178
+ +T+ + GC +G + A G + +V G+ ++IN C + +
Sbjct: 284 SIVTWNTIAGGCLE-----AGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKW 338
Query: 179 -KLFDEIPVTDVV-------TWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGL 230
K+F + + NS++ Y R L +A +F+++ ++ +WNSII+G
Sbjct: 339 GKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGF 398
Query: 231 VQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSY-LRRNGIECD 289
++E L EM P+ IT+AS+L A++G + HGK H Y LRR +
Sbjct: 399 AYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDC 458
Query: 290 VVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMER 349
+++ +LV+MY K G + A +F+ M ++D +T++I + G G A F +M+R
Sbjct: 459 LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDR 518
Query: 350 AGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFD 409
+G+KP+HVT V +LSAC+HS LV +G W F M+ V+ I ++ HY+CMVDL RA D
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLD 578
Query: 410 ESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALH-LIDLEPHNHAFYMNLCDIY 468
++ + ++P EP + LL C +HGN +GE A L++ +P + YM L D+Y
Sbjct: 579 KARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMY 638
Query: 469 GKAGRFDAAKRIRNLLKERRVQK 491
G + ++ LL + VQK
Sbjct: 639 AVTGSWSKLVTVKTLLSDLGVQK 661
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 170/337 (50%), Gaps = 18/337 (5%)
Query: 86 YNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIV 145
+N++I +Y + ++ F ++ +YK+M+ GI + T+P +IK C +D A G +V
Sbjct: 152 WNVLIGSY-----IRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVV 206
Query: 146 HAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGL 205
H + +++ N+LI++Y G + AR+LFD + D V+WN+++ Y L
Sbjct: 207 HGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKL 266
Query: 206 DNALDLFRKMN----GKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASV 261
A L +M +I++WN+I G ++ G AL M+ +V+ + + +
Sbjct: 267 GEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMING 326
Query: 262 LSACAQLGAIDHGKWVHSYLRRN-GIECDV-VIGTALVNMYGKCGLVQQAFEIFEEMPEK 319
L AC+ +GA+ GK H + R+ D+ + +L+ MY +C ++ AF +F+++
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 320 DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGR--W 377
S W ++IS FA + + EM +G PNH+T +L A G ++ G+
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 378 CFDVMKRVY-----LIEPQVYHYACMVDLLSRARLFD 409
C+ + ++ Y L V YA ++++ R+FD
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFD 483
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 103/242 (42%), Gaps = 31/242 (12%)
Query: 129 LIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTD 188
L+ C + + G+ +HA + G D L+ Y LL A+ + + +
Sbjct: 89 LLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILH 148
Query: 189 VVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQ 248
+ WN ++ Y+RN ++ ++++M K I
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGI---------------------------- 180
Query: 249 ISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQ 308
+ D+ T SV+ ACA L +G+ VH + + C++ + AL++MY + G V
Sbjct: 181 ---RADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDV 237
Query: 309 AFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAH 368
A +F+ M E+D +W A+I+ + +AF M +GV+ + VT+ + C
Sbjct: 238 ARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLE 297
Query: 369 SG 370
+G
Sbjct: 298 AG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 224/443 (50%), Gaps = 23/443 (5%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ ++G A +F ++ D +N +I Y + + + A L +M G+
Sbjct: 229 YKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE-----AFKLLDRMYLSGVEA 283
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLS-DVFNGN-SLINLYMTCGLLSNAR- 178
+ +T+ + GC +G + A G + +V G+ ++IN C + +
Sbjct: 284 SIVTWNTIAGGCLE-----AGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKW 338
Query: 179 -KLFDEIPVTDVV-------TWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGL 230
K+F + + NS++ Y R L +A +F+++ ++ +WNSII+G
Sbjct: 339 GKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGF 398
Query: 231 VQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSY-LRRNGIECD 289
++E L EM P+ IT+AS+L A++G + HGK H Y LRR +
Sbjct: 399 AYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDC 458
Query: 290 VVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMER 349
+++ +LV+MY K G + A +F+ M ++D +T++I + G G A F +M+R
Sbjct: 459 LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDR 518
Query: 350 AGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFD 409
+G+KP+HVT V +LSAC+HS LV +G W F M+ V+ I ++ HY+CMVDL RA D
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLD 578
Query: 410 ESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALH-LIDLEPHNHAFYMNLCDIY 468
++ + ++P EP + LL C +HGN +GE A L++ +P + YM L D+Y
Sbjct: 579 KARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMY 638
Query: 469 GKAGRFDAAKRIRNLLKERRVQK 491
G + ++ LL + VQK
Sbjct: 639 AVTGSWSKLVTVKTLLSDLGVQK 661
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 170/337 (50%), Gaps = 18/337 (5%)
Query: 86 YNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIV 145
+N++I +Y + ++ F ++ +YK+M+ GI + T+P +IK C +D A G +V
Sbjct: 152 WNVLIGSY-----IRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVV 206
Query: 146 HAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGL 205
H + +++ N+LI++Y G + AR+LFD + D V+WN+++ Y L
Sbjct: 207 HGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKL 266
Query: 206 DNALDLFRKMN----GKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASV 261
A L +M +I++WN+I G ++ G AL M+ +V+ + + +
Sbjct: 267 GEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMING 326
Query: 262 LSACAQLGAIDHGKWVHSYLRRN-GIECDV-VIGTALVNMYGKCGLVQQAFEIFEEMPEK 319
L AC+ +GA+ GK H + R+ D+ + +L+ MY +C ++ AF +F+++
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 320 DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGR--W 377
S W ++IS FA + + EM +G PNH+T +L A G ++ G+
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 378 CFDVMKRVY-----LIEPQVYHYACMVDLLSRARLFD 409
C+ + ++ Y L V YA ++++ R+FD
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFD 483
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 103/242 (42%), Gaps = 31/242 (12%)
Query: 129 LIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTD 188
L+ C + + G+ +HA + G D L+ Y LL A+ + + +
Sbjct: 89 LLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILH 148
Query: 189 VVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQ 248
+ WN ++ Y+RN ++ ++++M K I
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGI---------------------------- 180
Query: 249 ISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQ 308
+ D+ T SV+ ACA L +G+ VH + + C++ + AL++MY + G V
Sbjct: 181 ---RADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDV 237
Query: 309 AFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAH 368
A +F+ M E+D +W A+I+ + +AF M +GV+ + VT+ + C
Sbjct: 238 ARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLE 297
Query: 369 SG 370
+G
Sbjct: 298 AG 299
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 149/502 (29%), Positives = 241/502 (48%), Gaps = 60/502 (11%)
Query: 18 LSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHM 77
LS L + K L + K+IH Q++ + H + + + S ++ S VF
Sbjct: 11 LSLLQQNSKTLIQAKQIHAQLVIN-GCHDNSLFGKLIGHYCSKPSTESSSKLAHLLVFPR 69
Query: 78 INNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWM 137
+PD ++N +++ D + R F A K L ++ N TF F++ C R
Sbjct: 70 FGHPDKFLFNTLLKCSKPEDSI--RIF--ANYASKSSL---LYLNERTFVFVLGACARSA 122
Query: 138 DGAS---GEIVHAQVVKFGFLSDV-FNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWN 193
++ G IVH V K GFL + G +L++ Y
Sbjct: 123 SSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYA------------------------ 158
Query: 194 SMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQ-----GGLAKEALELFHEMQ- 247
+NG L A +F +M + ++WN++I G A++A+ LF
Sbjct: 159 -------KNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSC 211
Query: 248 -QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGI--ECDVVIGTALVNMYGKCG 304
V+P T+ VLSA +Q G ++ G VH Y+ + G E DV IGTALV+MY KCG
Sbjct: 212 CGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCG 271
Query: 305 LVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLS 364
+ AF +FE M K+ WT+M + AL+G G + + M +G+KPN +TF LLS
Sbjct: 272 CLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLS 331
Query: 365 ACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDV 424
A H GLVE+G F MK + + P + HY C+VDLL +A E+ I +MP++PD
Sbjct: 332 AYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDA 391
Query: 425 YVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAF-------YMNLCDIYGKAGRFDAA 477
+ +L C ++G +GE++ L+++E + Y+ L ++ G++
Sbjct: 392 ILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEV 451
Query: 478 KRIRNLLKERRVQKKIPGCSMI 499
+++R +KERR++ + PG S +
Sbjct: 452 EKLRKEMKERRIKTR-PGYSFV 472
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 217/412 (52%), Gaps = 35/412 (8%)
Query: 99 VDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGAS-GEIVHAQVVKFGFLSD 157
V ++++ + L++ M + + PN +T ++ C G+S + +H + G +D
Sbjct: 227 VANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHAD 286
Query: 158 VFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNG 217
+ + +Y CG +S +R LF+ V DVV
Sbjct: 287 ERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVM-------------------------- 320
Query: 218 KNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWV 277
W+S+I+G + G E + L ++M++ ++ + +T+ +++SAC + V
Sbjct: 321 -----WSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTV 375
Query: 278 HSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLG 337
HS + + G +++G AL++MY KCG + A E+F E+ EKD +W++MI+ + LHG G
Sbjct: 376 HSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHG 435
Query: 338 WKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYAC 397
+A + F M + G + + + F+ +LSAC H+GLVE+ + F + Y + + HYAC
Sbjct: 436 SEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGK-YHMPVTLEHYAC 494
Query: 398 MVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVEL-GEKVALHLIDLEPH 456
++LL R D++ + +MPM+P +W +LL C+ HG +++ G+ +A L+ EP
Sbjct: 495 YINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPD 554
Query: 457 NHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEF 508
N A Y+ L I+ ++G + AA+ +R +++ R++ K G S IE ++++
Sbjct: 555 NPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLN-KCYGFSKIEPELQIEDY 605
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 133/279 (47%), Gaps = 37/279 (13%)
Query: 58 FSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCD 117
F + + G+ + + +F D+ +++ MI YA + M L +M +
Sbjct: 293 FMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSE-----VMNLLNQMRKE 347
Query: 118 GIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNA 177
GI N +T ++ CT + VH+Q++K GF+S + GN+LI++Y CG LS A
Sbjct: 348 GIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAA 407
Query: 178 RKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAK 237
R++F E+ D+V+W+SM+ Y +G AL++F+ G+++GG
Sbjct: 408 REVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFK---------------GMIKGG--- 449
Query: 238 EALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALV 297
HE+ D + ++LSAC G ++ + + + + + + +
Sbjct: 450 ------HEV-------DDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYI 496
Query: 298 NMYGKCGLVQQAFEIFEEMPEKDTSA-WTAMISVFALHG 335
N+ G+ G + AFE+ MP K ++ W++++S HG
Sbjct: 497 NLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHG 535
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 142/304 (46%), Gaps = 27/304 (8%)
Query: 152 FGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTD------VVTWNSMVIGYLRNGGL 205
+GF+ SL+ L G S ++F + + D V+ ++V YL+
Sbjct: 142 YGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDH 201
Query: 206 DNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSAC 265
A +F +M KN +SW ++I+G V + ++LF MQ+ +++P+++T+ SVL AC
Sbjct: 202 AAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPAC 261
Query: 266 AQLGAIDHG----KWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDT 321
+L ++G K +H + R+G D + A + MY +CG V + +FE +D
Sbjct: 262 VEL---NYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDV 318
Query: 322 SAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFD- 380
W++MIS +A G + + +M + G++ N VT + ++SAC +S L+
Sbjct: 319 VMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQ 378
Query: 381 -----VMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQ 435
M + L + YA L + +F E E D+ W +++
Sbjct: 379 ILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELT--------EKDLVSWSSMINAYG 430
Query: 436 MHGN 439
+HG+
Sbjct: 431 LHGH 434
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 35/272 (12%)
Query: 99 VDDRHFCRAMVLYK-KMLCDGIFPNCLTFPFLIKGCTRWMDG-ASGEIVHAQVVKFGFLS 156
V D+ + A+ LYK K+ G P +IK C + G +H +K G
Sbjct: 21 VSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADC 80
Query: 157 DVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMN 216
D NSLI++Y RK+FDE+ D V++ S
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCS---------------------- 118
Query: 217 GKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDH-GK 275
II Q GL EA++L EM P +AS+L+ C ++G+ +
Sbjct: 119 ---------IINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVAR 169
Query: 276 WVHS-YLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALH 334
H+ L ++ V++ TALV+MY K AF +F++M K+ +WTAMIS +
Sbjct: 170 MFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVAN 229
Query: 335 GLGWKAFDCFLEMERAGVKPNHVTFVGLLSAC 366
D F M+R ++PN VT + +L AC
Sbjct: 230 QNYEMGVDLFRAMQRENLRPNRVTLLSVLPAC 261
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 102/234 (43%), Gaps = 4/234 (1%)
Query: 213 RKMNGKNIISWNSIITGLVQGGLAKEALELFH-EMQQISVKPDKITIASVLSACA-QLGA 270
R ++ + + + + GLV EAL L+ ++ + + SV+ ACA Q
Sbjct: 3 RALSSRLNLELGNKLKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEP 62
Query: 271 IDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISV 330
G +H + G +CD V+ +L++MY K ++F+EM +DT ++ ++I+
Sbjct: 63 FLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINS 122
Query: 331 FALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRV-YLIE 389
GL ++A EM G P LL+ C G + F + V ++
Sbjct: 123 CCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQ 182
Query: 390 PQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELG 443
V +VD+ + + + M ++ +V W A++ GC + N E+G
Sbjct: 183 ESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEV-SWTAMISGCVANQNYEMG 235
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 138/487 (28%), Positives = 235/487 (48%), Gaps = 48/487 (9%)
Query: 32 KRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIR 91
K IH +I+ S +L + + + SC G A VF I+NP+L +N +I
Sbjct: 320 KLIHARIIVSDSLADLPLDNALLDMYCSC-----GDMREAFYVFGRIHNPNLVSWNSII- 373
Query: 92 AYAGMDGVDDRHFC-RAMVLYKKML-CDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQV 149
G + F +AM++Y+++L P+ TF I G+++H QV
Sbjct: 374 -----SGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQV 428
Query: 150 VKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNAL 209
K G+ VF G +L+++Y +A+K+FD
Sbjct: 429 TKLGYERSVFVGTTLLSMYFKNREAESAQKVFD--------------------------- 461
Query: 210 DLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLG 269
M ++++ W +I G + G ++ A++ F EM + + D +++SV+ AC+ +
Sbjct: 462 ----VMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMA 517
Query: 270 AIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMIS 329
+ G+ H R G +C + + ALV+MYGK G + A IF D W +M+
Sbjct: 518 MLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLG 577
Query: 330 VFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIE 389
++ HG+ KA F ++ G P+ VT++ LL+AC+H G QG++ ++ MK I+
Sbjct: 578 AYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKE-QGIK 636
Query: 390 PQVYHYACMVDLLSRARLFDESVILI-RSMPMEPDVYVWGALLGGCQMHGNVELGEKVAL 448
HY+CMV+L+S+A L DE++ LI +S P +W LL C N+++G A
Sbjct: 637 AGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAE 696
Query: 449 HLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEI-NGVVQE 507
++ L+P + A ++ L ++Y GR++ +R ++ K PG S IE+ N Q
Sbjct: 697 QILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRG-LASSKDPGLSWIEVNNNNTQV 755
Query: 508 FSAGGSS 514
FS+G S
Sbjct: 756 FSSGDQS 762
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/511 (21%), Positives = 219/511 (42%), Gaps = 81/511 (15%)
Query: 14 LKNALSRLIEQCKNLRELKR---IHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTY 70
+ +++ L +C ++ LKR IH +LT+ +++ + L+ + + GS
Sbjct: 93 IASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLI--SMYVRCGSLEQ 150
Query: 71 ATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLI 130
A VF + + ++ YN + AY+ + A L M + + PN TF L+
Sbjct: 151 ARKVFDKMPHRNVVSYNALYSAYSR----NPDFASYAFPLTTHMAFEYVKPNSSTFTSLV 206
Query: 131 KGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVV 190
+ C D G +++Q++K G+ +V S++ +Y +CG L +AR++
Sbjct: 207 QVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRI---------- 256
Query: 191 TWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQIS 250
F +N ++ ++WN++I G ++ ++ L F M
Sbjct: 257 ---------------------FDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSG 295
Query: 251 VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAF 310
V P + T + VL+ C++LG+ GK +H+ + + D+ + AL++MY CG +++AF
Sbjct: 296 VDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAF 355
Query: 311 EIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGV-KPNHVTFVGLLSACAHS 369
+F + + +W ++IS + +G G +A + + R +P+ TF +SA A
Sbjct: 356 YVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEP 415
Query: 370 GLVEQGRWCF-DVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWG 428
G+ V K Y E V+ ++ + + R ES + + E DV +W
Sbjct: 416 ERFVHGKLLHGQVTKLGY--ERSVFVGTTLLSMYFKNRE-AESAQKVFDVMKERDVVLWT 472
Query: 429 ALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMN------------------------- 463
++ G GN EL + + + + + F ++
Sbjct: 473 EMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRT 532
Query: 464 -----------LCDIYGKAGRFDAAKRIRNL 483
L D+YGK G+++ A+ I +L
Sbjct: 533 GFDCVMSVCGALVDMYGKNGKYETAETIFSL 563
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 142/336 (42%), Gaps = 46/336 (13%)
Query: 142 GEIVHAQVVKFGFLSDVFN------GNSLINLYMTC---GLLSNARKLF----------- 181
G +H+Q++K G +F +S++ L C +L AR++
Sbjct: 69 GSSLHSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAA 128
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQG-GLAKEAL 240
E P + N+++ Y+R G L+ A +F KM +N++S+N++ + + A A
Sbjct: 129 TESPYAN----NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAF 184
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
L M VKP+ T S++ CA L + G ++S + + G +VV+ T+++ MY
Sbjct: 185 PLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMY 244
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
CG ++ A IF+ + +D AW MI + F M +GV P T+
Sbjct: 245 SSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYS 304
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFD--------ESV 412
+L+ C+ G G+ LI ++ + DL L D
Sbjct: 305 IVLNGCSKLGSYSLGK----------LIHARIIVSDSLADLPLDNALLDMYCSCGDMREA 354
Query: 413 ILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVAL 448
+ P++ W +++ GC +G GE+ L
Sbjct: 355 FYVFGRIHNPNLVSWNSIISGCSENG---FGEQAML 387
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 140/332 (42%), Gaps = 66/332 (19%)
Query: 159 FNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWN--SMVIGYLRNGGLDNALDLFRKMN 216
+ N+LI++Y+ C L ARK+FD++P ++VT S V Y+ G
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMG------------- 69
Query: 217 GKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKW 276
+S+ + +++ L + F + +I+ ++ + C + + +
Sbjct: 70 -------SSLHSQIIK--LGSFQMIFFMPLNEIAS-----SVVELTRKCVSITVLKRARQ 115
Query: 277 VHSYLRRNGIECDVVIGTA---LVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFAL 333
+H+ + G A L++MY +CG ++QA ++F++MP ++ ++ A+ S ++
Sbjct: 116 IHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSR 175
Query: 334 H-GLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWC-FDVMKRVY----L 387
+ AF M VKPN TF L+ CA V G ++K Y +
Sbjct: 176 NPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVV 235
Query: 388 IEPQVY-HYACMVDLLSRARLFD------------------------ESVILIRSMPM-- 420
++ V Y+ DL S R+FD + ++ R+M M
Sbjct: 236 VQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSG 295
Query: 421 -EPDVYVWGALLGGCQMHGNVELGEKVALHLI 451
+P + + +L GC G+ LG+ + +I
Sbjct: 296 VDPTQFTYSIVLNGCSKLGSYSLGKLIHARII 327
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 131/439 (29%), Positives = 215/439 (48%), Gaps = 52/439 (11%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+SKYG + VF + DL +N ++ + + + A+ ++ M + +
Sbjct: 129 YSKYGHLVDSVRVFESVEEKDLVSWNALLSGF-----LRNGKGKEALGVFAAMYRERVEI 183
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ T ++K C G+ VHA VV G V G ++I+ Y + GL++ A K++
Sbjct: 184 SEFTLSSVVKTCASLKILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKVY 242
Query: 182 DEIPV-TDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
+ + V TD V NS++ G +RN A L +
Sbjct: 243 NSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ------------------------- 277
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
+P+ ++S L+ C+ + GK +H RNG D + L++MY
Sbjct: 278 -----------RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMY 326
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEM--ERAGVKPNHVT 358
GKCG + QA IF +P K +WT+MI +A++G G KA + F EM E +GV PN VT
Sbjct: 327 GKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVT 386
Query: 359 FVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSM 418
F+ ++SACAH+GLV++G+ CF +MK Y + P HY C +D+LS+A +E L+ M
Sbjct: 387 FLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERM 446
Query: 419 PMEPD-----VYVWGALLGGCQMHGNVELGEKVALHLI-DLEPHNHAFYMNLCDIYGKAG 472
ME D +W A+L C ++ ++ GE VA L+ + P N + Y+ + + Y G
Sbjct: 447 -MENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMG 505
Query: 473 RFDAAKRIRNLLKERRVQK 491
++D + +R LK + + K
Sbjct: 506 KWDVVEELRGKLKNKGLVK 524
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 148/341 (43%), Gaps = 50/341 (14%)
Query: 232 QGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVV 291
+ G + L LF ++ + S T VL AC+ L + G+ VH+ + + G E +
Sbjct: 61 RSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTI 120
Query: 292 IGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAG 351
TAL++MY K G + + +FE + EKD +W A++S F +G G +A F M R
Sbjct: 121 SKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRER 180
Query: 352 VKPNHVTFVGLLSACAHSGLVEQGRWCFDVM----KRVYLIEPQVYHYACMVDLLSRA-- 405
V+ + T ++ CA +++QG+ ++ + + ++ + + V L++ A
Sbjct: 181 VEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMK 240
Query: 406 ------------------------RLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVE 441
R + E+ +L+ P+V V + L GC + ++
Sbjct: 241 VYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSR--QRPNVRVLSSSLAGCSDNSDLW 298
Query: 442 LGEKVALHLIDLEP---HNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSM 498
+G+++ H + L + L D+YGK G+ A+ I + + V + SM
Sbjct: 299 IGKQI--HCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSV---VSWTSM 353
Query: 499 IE---ING-------VVQEFSAGGSSELPMKDLVLILDRLC 529
I+ +NG + +E GS LP L++ C
Sbjct: 354 IDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISAC 394
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 114/242 (47%), Gaps = 26/242 (10%)
Query: 17 ALSRLIEQCKNLREL---KRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATN 73
LS +++ C +L+ L K++H ++ + D L T ++ +S G A
Sbjct: 187 TLSSVVKTCASLKILQQGKQVHAMVVVT----GRDLVVLGTAMI--SFYSSVGLINEAMK 240
Query: 74 VFHMIN-NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKG 132
V++ +N + D + N +I + +R++ A +L + PN + G
Sbjct: 241 VYNSLNVHTDEVMLNSLISGC-----IRNRNYKEAFLLMSRQR-----PNVRVLSSSLAG 290
Query: 133 CTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTW 192
C+ D G+ +H ++ GF+SD N L+++Y CG + AR +F IP VV+W
Sbjct: 291 CSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSW 350
Query: 193 NSMVIGYLRNGGLDNALDLFRKMNGK------NIISWNSIITGLVQGGLAKEALELFHEM 246
SM+ Y NG AL++FR+M + N +++ +I+ GL KE E F M
Sbjct: 351 TSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMM 410
Query: 247 QQ 248
++
Sbjct: 411 KE 412
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 194 bits (494), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 239/473 (50%), Gaps = 48/473 (10%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+SK A VF ++ +N ++ + V ++ + A+ ++ M+ + +
Sbjct: 272 YSKGFDVDSAFRVFDETTCRNIVSWNSILAGF-----VHNQRYDEALEMFHLMVQEAVEV 326
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ +T L++ C + + +H +++ G+ S+ +SLI+ Y +C L+ +A +
Sbjct: 327 DEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVL 386
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
D M K+++S +++I+GL G + EA+
Sbjct: 387 D-------------------------------SMTYKDVVSCSTMISGLAHAGRSDEAIS 415
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSY-LRRNGIECDVVIGTALVNMY 300
+F M+ P+ IT+ S+L+AC+ + KW H +RR+ D+ +GT++V+ Y
Sbjct: 416 IFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAY 472
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
KCG ++ A F+++ EK+ +WT +IS +A++GL KA F EM++ G PN VT++
Sbjct: 473 AKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYL 532
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP- 419
LSAC H GLV++G F M +P + HY+C+VD+LSRA D +V LI+++P
Sbjct: 533 AALSACNHGGLVKKGLMIFKSMVEEDH-KPSLQHYSCIVDMLSRAGEIDTAVELIKNLPE 591
Query: 420 -MEPDVYVWGALLGGCQMH-GNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAA 477
++ WGA+L GC+ + + +V +++LEP + Y+ + ++
Sbjct: 592 DVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDV 651
Query: 478 KRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAG---GSSELPMKDLVLILDR 527
+R L+KER+V + + G SM+ + + F AG S+ + D+V L R
Sbjct: 652 AMMRRLVKERKV-RVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSLHR 703
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/466 (26%), Positives = 203/466 (43%), Gaps = 80/466 (17%)
Query: 60 CSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDG- 118
C ++ S + A +F ++ D+ ++++IR+Y V + + L+K+M+ +
Sbjct: 168 CMYADSDSLS-ARKLFDEMSERDVISWSVVIRSY-----VQSKEPVVGLKLFKEMVHEAK 221
Query: 119 IFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGF-LSDVFNGNSLINLYMTCGLLSNA 177
P+C+T ++K CT D G VH ++ GF L+DVF NSLI++Y
Sbjct: 222 TEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMY--------- 272
Query: 178 RKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAK 237
K FD +D+A +F + +NI+SWNSI+ G V
Sbjct: 273 SKGFD----------------------VDSAFRVFDETTCRNIVSWNSILAGFVHNQRYD 310
Query: 238 EALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALV 297
EALE+FH M Q +V+ D++T+ S+L C K +H + R G E + V ++L+
Sbjct: 311 EALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLI 370
Query: 298 NMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHV 357
+ Y C LV A + + M KD + + MIS A G +A F M PN +
Sbjct: 371 DAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAI 427
Query: 358 TFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRA-------RLFDE 410
T + LL+AC+ S + +W + R L + +VD ++ R FD+
Sbjct: 428 TVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQ 487
Query: 411 -------------SVILIRSMP--------------MEPDVYVWGALLGGCQMHGNVELG 443
S I +P P+ + A L C G V+ G
Sbjct: 488 ITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKG 547
Query: 444 EKVALHLIDLEPHNHAF--YMNLCDIYGKAGRFDAA-KRIRNLLKE 486
+ +++ E H + Y + D+ +AG D A + I+NL ++
Sbjct: 548 LMIFKSMVE-EDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPED 592
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 130/323 (40%), Gaps = 71/323 (21%)
Query: 120 FPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARK 179
F + FP + K C + LS +F GNS+ + YM CG L +
Sbjct: 42 FNDPFVFPIVFKACAK-------------------LSWLFQGNSIADFYMKCGDLCSG-- 80
Query: 180 LFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEA 239
L F MN ++ +SWN I+ GL+ G +E
Sbjct: 81 -----------------------------LREFDCMNSRDSVSWNVIVFGLLDYGFEEEG 111
Query: 240 LELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNM 299
L F +++ +P+ T+ V+ AC L G+ +H Y+ R+G + +++ M
Sbjct: 112 LWWFSKLRVWGFEPNTSTLVLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCM 169
Query: 300 YGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEM-ERAGVKPNHVT 358
Y + A ++F+EM E+D +W+ +I + F EM A +P+ VT
Sbjct: 170 YADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVT 228
Query: 359 FVGLLSACAHSGLVEQGRWC--------FDVMKRVYLIEPQVYHYACMVDLLSRARLFDE 410
+L AC ++ GR FD + V++ + Y+ D+ S R+FDE
Sbjct: 229 VTSVLKACTVMEDIDVGRSVHGFSIRRGFD-LADVFVCNSLIDMYSKGFDVDSAFRVFDE 287
Query: 411 SVILIRSMPMEPDVYVWGALLGG 433
+ ++ W ++L G
Sbjct: 288 TTC--------RNIVSWNSILAG 302
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 218/444 (49%), Gaps = 39/444 (8%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+S G + + F+ + D+ +N ++ A V D ++ L+ KM G P
Sbjct: 259 YSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLD-----SLDLFSKMQFWGKRP 313
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGF-LSDVFNGNSLINLYMTCGLLSNARKL 180
+ F + C+R D SG+ +H V+K GF +S + ++LI++Y C + N+ L
Sbjct: 314 SIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALL 373
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
+ +P N+ NS++T L+ G+ K+ +
Sbjct: 374 YQSLPCL-------------------------------NLECCNSLMTSLMHCGITKDII 402
Query: 241 ELFHEMQQISVKPDKITIASVLSACA-QLGAIDHG-KWVHSYLRRNGIECDVVIGTALVN 298
E+F M D++T+++VL A + L H VH ++G DV + +L++
Sbjct: 403 EMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLID 462
Query: 299 MYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVT 358
Y K G + + ++F+E+ + T++I+ +A +G+G EM+R + P+ VT
Sbjct: 463 AYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVT 522
Query: 359 FVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSM 418
+ +LS C+HSGLVE+G FD ++ Y I P YACMVDLL RA L +++ L+
Sbjct: 523 ILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQA 582
Query: 419 PMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAK 478
+ D W +LL C++H N +G + A L++LEP N A Y+ + Y + G F+ ++
Sbjct: 583 RGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISR 642
Query: 479 RIRNLLKERRVQKKIPGCSMIEIN 502
+IR + R + ++I S++ N
Sbjct: 643 QIREIAASRELMREIGYSSVVVKN 666
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 201/458 (43%), Gaps = 81/458 (17%)
Query: 71 ATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLI 130
A +F + + +L V N+++R + G R F +Y +M +G+ N LT+ ++I
Sbjct: 166 ALKLFDEMLDRNLAVCNLLLRCFC-QTGESKRLF----EVYLRMELEGVAKNGLTYCYMI 220
Query: 131 KGCTRWMDGASGEIVHAQVVKFGF-LSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDV 189
+GC+ G+ +H+ VVK G+ +S++F N L++ Y CG LS + + F+ +P
Sbjct: 221 RGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVP---- 276
Query: 190 VTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQI 249
K++ISWNSI++ G ++L+LF +MQ
Sbjct: 277 ---------------------------EKDVISWNSIVSVCADYGSVLDSLDLFSKMQFW 309
Query: 250 SVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVV-IGTALVNMYGKCGLVQQ 308
+P S L+ C++ I GK +H Y+ + G + + + +AL++MYGKC ++
Sbjct: 310 GKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIEN 369
Query: 309 AFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACA- 367
+ +++ +P + ++++ G+ + F M G + VT +L A +
Sbjct: 370 SALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSL 429
Query: 368 ------------HSGLVEQGRWCFDVMKRVYLIE--------------------PQVYHY 395
H ++ G + DV LI+ P ++
Sbjct: 430 SLPESLHSCTLVHCCAIKSG-YAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCL 488
Query: 396 ACMVDLLSRARLFDESVILIRSMP---MEPDVYVWGALLGGCQMHGNVELGEKVALHL-- 450
+++ +R + + V ++R M + PD ++L GC G VE GE + L
Sbjct: 489 TSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLES 548
Query: 451 -IDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKER 487
+ P Y + D+ G+AG + A+R+ LL+ R
Sbjct: 549 KYGISP-GRKLYACMVDLLGRAGLVEKAERL--LLQAR 583
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 163/359 (45%), Gaps = 41/359 (11%)
Query: 64 KYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFC--RAMVLYKKMLCDGIFP 121
K G+ A F ++ D+ YN++I + R+ C RA+ LY +M+ G+
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVVTYNLLISG-------NSRYGCSLRAIELYAEMVSCGLRE 110
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ TFP ++ C+ + G VH +V+ GF ++F ++L+ LY L+ A KLF
Sbjct: 111 SASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLF 170
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
DE M +N+ N ++ Q G +K E
Sbjct: 171 DE-------------------------------MLDRNLAVCNLLLRCFCQTGESKRLFE 199
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIE-CDVVIGTALVNMY 300
++ M+ V + +T ++ C+ + GK +HS + ++G ++ + LV+ Y
Sbjct: 200 VYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYY 259
Query: 301 GKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
CG + + F +PEKD +W +++SV A +G + D F +M+ G +P+ F+
Sbjct: 260 SACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFM 319
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP 419
L+ C+ + ++ G+ + ++ ++ + ++D+ + + S +L +S+P
Sbjct: 320 SFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLP 378
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 134/269 (49%), Gaps = 15/269 (5%)
Query: 179 KLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKE 238
+E P V T N + +++G L +A + F +M+ ++++++N +I+G + G +
Sbjct: 36 SFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLR 95
Query: 239 ALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVN 298
A+EL+ EM ++ T SVLS C+ G VH + G C++ + +ALV
Sbjct: 96 AIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVG 155
Query: 299 MYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVT 358
+Y LV A ++F+EM +++ + ++ F G + F+ +L ME GV N +T
Sbjct: 156 LYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLT 215
Query: 359 FVGLLSACAHSGLVEQGRWCFDVMKR-------VYLIEPQVYHYACMVDLLSRARLFDES 411
+ ++ C+H LV +G+ ++ + +++ V +Y+ DL R F+
Sbjct: 216 YCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFN-- 273
Query: 412 VILIRSMPMEPDVYVWGALLGGCQMHGNV 440
++P E DV W +++ C +G+V
Sbjct: 274 -----AVP-EKDVISWNSIVSVCADYGSV 296
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 226/471 (47%), Gaps = 44/471 (9%)
Query: 67 SFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTF 126
S A VF + +PD+ +N ++ Y V F + L+ ++ +FPN +F
Sbjct: 105 SLEDAHKVFDEMPDPDVISWNSLVSGY-----VQSGRFQEGICLFLELHRSDVFPNEFSF 159
Query: 127 PFLIKGCTRWMDGASGEIVHAQVVKFGF-LSDVFNGNSLINLYMTCGLLSNARKLFDEIP 185
+ C R G +H+++VK G +V GN LI++Y CG + +A +F +
Sbjct: 160 TAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHME 219
Query: 186 VTDVVTWNSMVIGYLRNGGLD-------------------------------NALDLFRK 214
D V+WN++V RNG L+ NA +
Sbjct: 220 EKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSD 279
Query: 215 MNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHG 274
M N SWN+I+TG V + EA E F +M V+ D+ +++ VL+A A L + G
Sbjct: 280 MPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWG 339
Query: 275 KWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALH 334
+H+ + G++ VV+ +AL++MY KCG+++ A +F MP K+ W MIS +A +
Sbjct: 340 SLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARN 399
Query: 335 GLGWKAFDCF--LEMERAGVKPNHVTFVGLLSACAHSGL-VEQGRWCFDVMKRVYLIEPQ 391
G +A F L+ ER +KP+ TF+ LL+ C+H + +E F++M Y I+P
Sbjct: 400 GDSIEAIKLFNQLKQERF-LKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPS 458
Query: 392 VYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLI 451
V H ++ + + ++ +I+ D W ALLG C +++ + VA +I
Sbjct: 459 VEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMI 518
Query: 452 DL--EPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIE 500
+L + Y+ + ++Y R+ +IR +++E V K++ G S I+
Sbjct: 519 ELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEV-GSSWID 568
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 130/290 (44%), Gaps = 73/290 (25%)
Query: 145 VHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGG 204
+H V K GF+S+ NSL+ Y T L +A K+FDE+P DV++WNS+V GY
Sbjct: 77 LHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGY----- 131
Query: 205 LDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSA 264
VQ G +E + LF E+ + V P++ + + L+A
Sbjct: 132 --------------------------VQSGRFQEGICLFLELHRSDVFPNEFSFTAALAA 165
Query: 265 CAQLGAIDHGKWVHSYLRRNGIE-CDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSA 323
CA+L G +HS L + G+E +VV+G L++MYGKCG + A +F+ M EKDT +
Sbjct: 166 CARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVS 225
Query: 324 WTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMK 383
W A++ ++C+ +G +E G W F M
Sbjct: 226 WNAIV-----------------------------------ASCSRNGKLELGLWFFHQMP 250
Query: 384 RVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGG 433
P Y ++D ++ F+ + ++ MP P+ W +L G
Sbjct: 251 -----NPDTVTYNELIDAFVKSGDFNNAFQVLSDMP-NPNSSSWNTILTG 294
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 128/263 (48%), Gaps = 13/263 (4%)
Query: 222 SWNSIITGLVQGG---LAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVH 278
SW++I+ L + G + + A+EL ++ + KPD + +L G + + +H
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELINDGE----KPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 279 SYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGW 338
Y+ ++G + + +L+ Y ++ A ++F+EMP+ D +W +++S + G
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ 138
Query: 339 KAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACM 398
+ FLE+ R+ V PN +F L+ACA L G + ++ L + V C+
Sbjct: 139 EGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCL 198
Query: 399 VDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPH-N 457
+D+ + D++V++ + M E D W A++ C +G +ELG L P+ +
Sbjct: 199 IDMYGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELG----LWFFHQMPNPD 253
Query: 458 HAFYMNLCDIYGKAGRFDAAKRI 480
Y L D + K+G F+ A ++
Sbjct: 254 TVTYNELIDAFVKSGDFNNAFQV 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 121/279 (43%), Gaps = 54/279 (19%)
Query: 61 SFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF 120
+F K G F A V + NP+ +N ++ Y V+ A + KM G+
Sbjct: 263 AFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGY-----VNSEKSGEATEFFTKMHSSGVR 317
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
+ + ++ G ++HA K G S V ++LI++Y CG+L +A +
Sbjct: 318 FDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELM 377
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
F +P +++ WN M+ GY RNG +SI EA+
Sbjct: 378 FWTMPRKNLIVWNEMISGYARNG--------------------DSI-----------EAI 406
Query: 241 ELFHEMQQIS-VKPDKITIASVLSACAQ--------LGAIDHGKWVHSYLRRNGIE-CDV 290
+LF++++Q +KPD+ T ++L+ C+ LG + ++ Y + +E C
Sbjct: 407 KLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFE--MMINEYRIKPSVEHC-- 462
Query: 291 VIGTALVNMYGKCGLVQQAFEIFEEMP-EKDTSAWTAMI 328
+L+ G+ G V QA ++ +E D AW A++
Sbjct: 463 ---CSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALL 498
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 210/414 (50%), Gaps = 16/414 (3%)
Query: 27 NLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVY 86
+LR L+++H ++ + D I + C + A VF I NP +
Sbjct: 177 DLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRV-----MSDARRVFDEIVNPSDVSW 231
Query: 87 NIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVH 146
N+++R Y M G +D A+V++ KML + P T ++ C+R + G+++H
Sbjct: 232 NVIVRRYLEM-GFNDE----AVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIH 286
Query: 147 AQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLD 206
A VK ++D S+ ++Y+ C L +AR++FD+ D+ +W S + GY +G
Sbjct: 287 AIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTR 346
Query: 207 NALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACA 266
A +LF M +NI+SWN+++ G V EAL+ M+Q D +T+ +L+ C+
Sbjct: 347 EARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCS 406
Query: 267 QLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPE-KDTSAWT 325
+ + GK H ++ R+G + +V++ AL++MYGKCG +Q A F +M E +D +W
Sbjct: 407 GISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWN 466
Query: 326 AMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRV 385
A+++ A G +A F E + KP+ T LL+ CA+ + G+ + R
Sbjct: 467 ALLTGVARVGRSEQALS-FFEGMQVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRD 525
Query: 386 -YLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHG 438
Y I+ V MVD+ S+ R FD ++ + + D+ +W +++ GC +G
Sbjct: 526 GYKID--VVIRGAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIRGCCRNG 576
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 174/336 (51%), Gaps = 36/336 (10%)
Query: 124 LTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDE 183
+T +++ C+ D G+ H + + G+ ++V N+L+++Y CG L +A
Sbjct: 396 VTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSAN----- 450
Query: 184 IPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNG-KNIISWNSIITGLVQGGLAKEALEL 242
W FR+M+ ++ +SWN+++TG+ + G +++AL
Sbjct: 451 -------IW-------------------FRQMSELRDEVSWNALLTGVARVGRSEQALSF 484
Query: 243 FHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGK 302
F MQ + KP K T+A++L+ CA + A++ GK +H +L R+G + DVVI A+V+MY K
Sbjct: 485 FEGMQ-VEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSK 543
Query: 303 CGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGL 362
C A E+F+E +D W ++I +G + F+ F+ +E GVKP+HVTF+G+
Sbjct: 544 CRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGI 603
Query: 363 LSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEP 422
L AC G VE G F M Y I PQV HY CM++L + + + MP +P
Sbjct: 604 LQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDP 663
Query: 423 DVYVWGALLGGCQMHGNVELGEKVALHLID---LEP 455
+ + + CQ + +LG A L++ L+P
Sbjct: 664 PMQMLTRINDACQRYRWSKLGAWAAKRLMNDHYLQP 699
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 184/413 (44%), Gaps = 70/413 (16%)
Query: 61 SFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF 120
++ K G A +F + D +N +I A A +GV D F ++++M DG+
Sbjct: 105 AYGKCGCVDDARELFEEMPERDGGSWNAVITACA-QNGVSDEVF----RMFRRMNRDGVR 159
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
+F ++K C +D +H VVK+G+ +V S++++Y C ++S+AR++
Sbjct: 160 ATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRV 219
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
FDEI V+WN +V YL G D EA+
Sbjct: 220 FDEIVNPSDVSWNVIVRRYLEMGFND-------------------------------EAV 248
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMY 300
+F +M +++V+P T++SV+ AC++ A++ GK +H+ + + D V+ T++ +MY
Sbjct: 249 VMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMY 308
Query: 301 GKC-------------------------------GLVQQAFEIFEEMPEKDTSAWTAMIS 329
KC GL ++A E+F+ MPE++ +W AM+
Sbjct: 309 VKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLG 368
Query: 330 VFALHGLGWKAFDCFLEMERAGVKP-NHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLI 388
+ +H W FL + R ++ ++VT V +L+ C+ V+ G+ + R +
Sbjct: 369 GY-VHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYR-HGY 426
Query: 389 EPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVE 441
+ V ++D+ + + I R M D W ALL G G E
Sbjct: 427 DTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSE 479
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 154/334 (46%), Gaps = 26/334 (7%)
Query: 167 LYMTC---GLLSNARKLFDEI----PVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKN 219
L+ +C L+ ARK+ + P+ + N + Y + G +D+A +LF +M ++
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERD 126
Query: 220 IISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHS 279
SWN++IT Q G++ E +F M + V+ + + A VL +C + + + +H
Sbjct: 127 GGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHC 186
Query: 280 YLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWK 339
+ + G +V + T++V++YGKC ++ A +F+E+ +W ++ + G +
Sbjct: 187 AVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDE 246
Query: 340 AFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRV-----YLIEPQVYH 394
A F +M V+P + T ++ AC+ S +E G+ + ++ ++ V+
Sbjct: 247 AVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFD 306
Query: 395 YACMVDLLSRA-RLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDL 453
D L A R+FD++ RS D+ W + + G M G + A L DL
Sbjct: 307 MYVKCDRLESARRVFDQT----RS----KDLKSWTSAMSGYAMSGLT----REARELFDL 354
Query: 454 EPHNHAFYMN-LCDIYGKAGRFDAAKRIRNLLKE 486
P + N + Y A +D A L+++
Sbjct: 355 MPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQ 388
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 134/326 (41%), Gaps = 38/326 (11%)
Query: 216 NGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGK 275
G + I+ L G ++K LF + +S + +C+ + +
Sbjct: 26 TGTKLTVTRQILEHLEGGNVSKAVSVLFASPEPVSY----WLYERLFRSCSSKALVVQAR 81
Query: 276 WVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHG 335
V S+L + + + YGKCG V A E+FEEMPE+D +W A+I+ A +G
Sbjct: 82 KVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNG 141
Query: 336 LGWKAFDCFLEMERAGVKPNHVTFVGLLSACA-------------------HSGLVEQGR 376
+ + F F M R GV+ +F G+L +C +SG V+
Sbjct: 142 VSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLET 201
Query: 377 WCFDV---------MKRVY--LIEPQVYHYACMVDLLSRARLFDESVILIRSM---PMEP 422
DV +RV+ ++ P + +V DE+V++ M + P
Sbjct: 202 SIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRP 261
Query: 423 DVYVWGALLGGCQMHGNVELGEKVALHLIDLEP-HNHAFYMNLCDIYGKAGRFDAAKRIR 481
+ +++ C +E+G+ + + L + ++ D+Y K R ++A+R+
Sbjct: 262 LNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVF 321
Query: 482 NLLKERRVQKKIPGCSMIEINGVVQE 507
+ + + ++ S ++G+ +E
Sbjct: 322 DQTRSKDLKSWTSAMSGYAMSGLTRE 347
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 82/198 (41%), Gaps = 32/198 (16%)
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
P+ T L+ GC G+ +H +++ G+ DV +++++Y C A ++
Sbjct: 494 PSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEV 553
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
F E D++ WNS++ G RNG +KE
Sbjct: 554 FKEAATRDLILWNSIIRGCCRNGR-------------------------------SKEVF 582
Query: 241 ELFHEMQQISVKPDKITIASVLSACAQLGAIDHG-KWVHSYLRRNGIECDVVIGTALVNM 299
ELF ++ VKPD +T +L AC + G ++ G ++ S + I V ++ +
Sbjct: 583 ELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIEL 642
Query: 300 YGKCGLVQQAFEIFEEMP 317
Y K G + Q E MP
Sbjct: 643 YCKYGCLHQLEEFLLLMP 660
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 184/343 (53%), Gaps = 13/343 (3%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
F+K A F + + +N M+ YA +D A+ L+ ML G+ P
Sbjct: 208 FAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTED-----ALRLFNDMLRLGVRP 262
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
N T+ +I C+ D + + + + + F +L++++ C + +AR++F
Sbjct: 263 NETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIF 322
Query: 182 DEIPVT-DVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
+E+ ++VTWN+M+ GY R G + +A LF M +N++SWNS+I G G A A+
Sbjct: 323 NELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAI 382
Query: 241 ELFHEMQQI-SVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNM 299
E F +M KPD++T+ SVLSAC + ++ G + Y+R+N I+ + +L+ M
Sbjct: 383 EFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFM 442
Query: 300 YGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
Y + G + +A +F+EM E+D ++ + + FA +G G + + +M+ G++P+ VT+
Sbjct: 443 YARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTY 502
Query: 360 VGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLL 402
+L+AC +GL+++G+ F ++ P HYACM DLL
Sbjct: 503 TSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM-DLL 539
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 125/535 (23%), Positives = 232/535 (43%), Gaps = 112/535 (20%)
Query: 9 SKSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSF 68
S+ LT+ +L+ + Q +L +IH Q++ +L Q + +R++ C+ + S+
Sbjct: 2 SRELTV--SLAAIASQALTFPQLNQIHAQLIVFNSLPR--QSYWASRIISCCTRLRAPSY 57
Query: 69 TYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPF 128
Y +F + P++ V N M + ++ MD +D + LY++ GI P+ +FP
Sbjct: 58 -YTRLIFDSVTFPNVFVVNSMFKYFSKMDMAND-----VLRLYEQRSRCGIMPDAFSFPV 111
Query: 129 LIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTD 188
+IK R+ G + A V K GF D + N ++++Y+ + +ARK+FD+I
Sbjct: 112 VIKSAGRF-----GILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRK 166
Query: 189 VVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGL------------------ 230
WN M+ GY + G + A LF M +++SW +ITG
Sbjct: 167 GSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPE 226
Query: 231 -------------VQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWV 277
Q G ++AL LF++M ++ V+P++ T V+SAC+ + +
Sbjct: 227 KSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSL 286
Query: 278 HSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEE---------------------- 315
+ + + + TAL++M+ KC +Q A IF E
Sbjct: 287 VKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGD 346
Query: 316 ----------MPEKDTSAWTAMISVFALHGLGWKAFDCFLEM-ERAGVKPNHVTFVGLLS 364
MP+++ +W ++I+ +A +G A + F +M + KP+ VT + +LS
Sbjct: 347 MSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLS 406
Query: 365 ACAHSGLVEQGRWCFDVMKRVYL------IEPQVYHYACMVDLLSRARLFD--------- 409
AC H +E G D +++ + ++ YA +L R+FD
Sbjct: 407 ACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVS 466
Query: 410 ---------------ESVILIRSMP---MEPDVYVWGALLGGCQMHGNVELGEKV 446
E++ L+ M +EPD + ++L C G ++ G+++
Sbjct: 467 YNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRI 521
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 218/468 (46%), Gaps = 45/468 (9%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+ + G F YA +VF + + D+ +N +I + + D + L ++M I P
Sbjct: 179 YRRLGVFDYALSVFLTMEDRDVVSWNCLILSCS--DSGNKEVALDQFWLMREM---EIQP 233
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+ T ++ C+ + + G+ A +K GFLS+ + I+++ C L ++ KLF
Sbjct: 234 DEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLF 293
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
E+ D V NSM+ Y SW+ ++AL
Sbjct: 294 RELEKWDSVLCNSMIGSY----------------------SWHCC---------GEDALR 322
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
LF SV+PDK T +SVLS+ + +DHG VHS + + G + D + T+L+ MY
Sbjct: 323 LFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVATSLMEMYF 381
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLE-MERAGVKPNHVTFV 360
K G V A +F + KD W +I A + ++ F + + +KP+ VT +
Sbjct: 382 KTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLM 441
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM 420
G+L AC ++G V +G F M++ + + P HYAC+++LL R + +E+ + +P
Sbjct: 442 GILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPF 501
Query: 421 EPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
EP ++W +L G+ L E VA +++ EP + Y+ L IY R++ + ++
Sbjct: 502 EPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKL 561
Query: 481 RNLLKERRVQKKIPGCSMIEINGVVQEFSA------GGSSELPMKDLV 522
R + E ++ K G S I I V F A GG + DL+
Sbjct: 562 RYAMNEHKL-KSAQGSSKISIESSVFSFEADQLQIHGGHDTCALLDLL 608
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 165/319 (51%), Gaps = 8/319 (2%)
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
P+ L F L+ +IVHAQ+++ GF+ + GN + LY G + NA +L
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 181 FDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEAL 240
FD+IP + +TWN + G +NG L+NALDLF +M ++++SWN++I+GLV G + +
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGI 121
Query: 241 ELFHEMQQISVKPDKIT--IASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVN 298
+F +MQ+ ++P + T I + L C + G HG + S + R ++V+ ++++
Sbjct: 122 RVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRY----NLVVWNSVMD 177
Query: 299 MYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVT 358
MY + G+ A +F M ++D +W +I + G A D F M ++P+ T
Sbjct: 178 MYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYT 237
Query: 359 FVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSM 418
++S C+ + +G+ + ++ + + A +D+ S+ D+SV L R +
Sbjct: 238 VSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAG-IDMFSKCNRLDDSVKLFREL 296
Query: 419 PMEPDVYVWGALLGGCQMH 437
+ D + +++G H
Sbjct: 297 E-KWDSVLCNSMIGSYSWH 314
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 96/178 (53%)
Query: 188 DVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQ 247
++V WNS++ Y R G D AL +F M ++++SWN +I G + AL+ F M+
Sbjct: 168 NLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMR 227
Query: 248 QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQ 307
++ ++PD+ T++ V+S C+ L + GK + + G + ++ A ++M+ KC +
Sbjct: 228 EMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLD 287
Query: 308 QAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSA 365
+ ++F E+ + D+ +MI ++ H G A F+ V+P+ TF +LS+
Sbjct: 288 DSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS 345
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 10/165 (6%)
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
K G + A ++F+EMPE+D +W MIS G F +M+R ++P TF
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSI 141
Query: 362 LLS--ACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP 419
L S C G G + R L+ + ++D+ R +FD ++ + +M
Sbjct: 142 LASLVTCVRHGEQIHGNAICSGVSRYNLVV-----WNSVMDMYRRLGVFDYALSVFLTME 196
Query: 420 MEPDVYVWGALLGGCQMHGN--VELGEKVALHLIDLEPHNHAFYM 462
+ DV W L+ C GN V L + + ++++P + M
Sbjct: 197 -DRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSM 240
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 215/475 (45%), Gaps = 40/475 (8%)
Query: 61 SFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF 120
++ +G A +F + + YN ++ + + H +A+ L+ ML G+
Sbjct: 360 AYMSFGMVDSAVEIFANVTEKNTITYNALMAGFC-----RNGHGLKALKLFTDMLQRGVE 414
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
+ + C + E +H +KFG + +L+++ C +++A ++
Sbjct: 415 LTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEM 474
Query: 181 FDEIP--VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKE 238
FD+ P + S++ GY RNG D A+ LF + L ++
Sbjct: 475 FDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRT-------------------LCEQ 515
Query: 239 ALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVN 298
L L D++++ +L+ C LG + G +H Y + G D+ +G +L++
Sbjct: 516 KLFL-----------DEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLIS 564
Query: 299 MYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVT 358
MY KC A +IF M E D +W ++IS + L G +A + M +KP+ +T
Sbjct: 565 MYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIIT 624
Query: 359 FVGLLSACAH--SGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIR 416
++SA + S + R F MK +Y IEP HY V +L L +E+ I
Sbjct: 625 LTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTIN 684
Query: 417 SMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDA 476
SMP++P+V V ALL C++H N + ++VA ++ +P + Y+ +IY +G +
Sbjct: 685 SMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHR 744
Query: 477 AKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLCNE 531
++ IR ++ER +K P S I + F A +S KD+ L+ L E
Sbjct: 745 SEMIREEMRERGYRKH-PAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIME 798
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 170/365 (46%), Gaps = 13/365 (3%)
Query: 73 NVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKG 132
+F I D+ +N ++ + +G + F + Y+ +G + T L+
Sbjct: 239 KLFDEIPQRDVASWNTVVSSLVK-EGKSHKAF---DLFYEMNRVEGFGVDSFTLSTLLSS 294
Query: 133 CTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTW 192
CT G +H + ++ G + ++ N+LI Y + L++ + D VT+
Sbjct: 295 CTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTF 354
Query: 193 NSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVK 252
M+ Y+ G +D+A+++F + KN I++N+++ G + G +AL+LF +M Q V+
Sbjct: 355 TEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVE 414
Query: 253 PDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEI 312
++ S + AC + + +H + + G + I TAL++M +C + A E+
Sbjct: 415 LTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEM 474
Query: 313 FEEMPEK--DTSAWTAMISVFALHGLGWKAFDCF-LEMERAGVKPNHVTFVGLLSACAHS 369
F++ P + A T++I +A +GL KA F + + + V+ +L+ C
Sbjct: 475 FDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTL 534
Query: 370 GLVEQGRW--CFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVW 427
G E G C+ +K Y + + + ++ + ++ D+++ + +M E DV W
Sbjct: 535 GFREMGYQIHCY-ALKAGYFSDISLGN--SLISMYAKCCDSDDAIKIFNTM-REHDVISW 590
Query: 428 GALLG 432
+L+
Sbjct: 591 NSLIS 595
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 152/333 (45%), Gaps = 38/333 (11%)
Query: 61 SFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF 120
++ K G A VF +++P + Y +I ++ ++ A+ ++ +M G+
Sbjct: 123 TYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLE-----IEALKVFFRMRKAGLV 177
Query: 121 -PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLY-----MTCGLL 174
PN TF ++ C R + G +H +VK GFL+ VF NSL++LY +C
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSC--- 234
Query: 175 SNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMN-----GKNIISWNSIITG 229
+ KLFDEIP DV +WN++V ++ G A DLF +MN G + + +++++
Sbjct: 235 DDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSS 294
Query: 230 LVQGGLAKEALELFHE------MQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRR 283
+ EL MQ++SV I S ++ + L
Sbjct: 295 CTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVES----------LYE 344
Query: 284 NGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDC 343
+ D V T ++ Y G+V A EIF + EK+T + A+++ F +G G KA
Sbjct: 345 MMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKL 404
Query: 344 FLEMERAGVKPNHVTFVGLLSACAHSGLVEQGR 376
F +M + GV+ + + AC GLV + +
Sbjct: 405 FTDMLQRGVELTDFSLTSAVDAC---GLVSEKK 434
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 186/377 (49%), Gaps = 38/377 (10%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
+++ G T A F M+ D+ + +I A + H +A+ ++ ML P
Sbjct: 228 YAQCGELTSALRAFDMMEEKDVISWTAVISACS-----RKGHGIKAIGMFIGMLNHWFLP 282
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
N T ++K C+ G VH+ VVK +DVF G SL+++Y CG +S+ RK+
Sbjct: 283 NEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKV- 341
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
F M+ +N ++W SII + G +EA+
Sbjct: 342 ------------------------------FDGMSNRNTVTWTSIIAAHAREGFGEEAIS 371
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
LF M++ + + +T+ S+L AC +GA+ GK +H+ + +N IE +V IG+ LV +Y
Sbjct: 372 LFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYC 431
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KCG + AF + +++P +D +WTAMIS + G +A D EM + GV+PN T+
Sbjct: 432 KCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSS 491
Query: 362 LLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME 421
L ACA+S + GR + K+ + + V+ + ++ + ++ E+ + SMP E
Sbjct: 492 ALKACANSESLLIGRSIHSIAKKNHAL-SNVFVGSALIHMYAKCGFVSEAFRVFDSMP-E 549
Query: 422 PDVYVWGALLGGCQMHG 438
++ W A++ G +G
Sbjct: 550 KNLVSWKAMIMGYARNG 566
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 198/425 (46%), Gaps = 49/425 (11%)
Query: 18 LSRLIEQCKNLRELKRIHTQILTSPNLHSSDQY-HLITRLLFSCSFSKYGSFTYATNVFH 76
L+ ++ +R +KRIH L + DQ + L+ SC + G YA VF
Sbjct: 88 LAEWLQSSNGMRLIKRIHAMALKCFD----DQVIYFGNNLISSCV--RLGDLVYARKVFD 141
Query: 77 MINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGI-FPNCLTFPFLIKGCTR 135
+ + + MI Y G++D F L++ + GI F N F L+ C+R
Sbjct: 142 SMPEKNTVTWTAMIDGYLKY-GLEDEAF----ALFEDYVKHGIRFTNERMFVCLLNLCSR 196
Query: 136 WMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSM 195
+ G VH +VK G V +++ +S+
Sbjct: 197 RAEFELGRQVHGNMVKVG--------------------------------VGNLIVESSL 224
Query: 196 VIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDK 255
V Y + G L +AL F M K++ISW ++I+ + G +A+ +F M P++
Sbjct: 225 VYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNE 284
Query: 256 ITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEE 315
T+ S+L AC++ A+ G+ VHS + + I+ DV +GT+L++MY KCG + ++F+
Sbjct: 285 FTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDG 344
Query: 316 MPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQG 375
M ++T WT++I+ A G G +A F M+R + N++T V +L AC G + G
Sbjct: 345 MSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLG 404
Query: 376 RWCF-DVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGC 434
+ ++K IE VY + +V L + ++ +++ +P DV W A++ GC
Sbjct: 405 KELHAQIIKNS--IEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP-SRDVVSWTAMISGC 461
Query: 435 QMHGN 439
G+
Sbjct: 462 SSLGH 466
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 152/321 (47%), Gaps = 39/321 (12%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFP 121
++K G + VF ++N + + +I A+A +G + A+ L++ M +
Sbjct: 329 YAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHA-REGFGEE----AISLFRIMKRRHLIA 383
Query: 122 NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
N LT +++ C G+ +HAQ++K +V+ G++L+ LY CG +A +
Sbjct: 384 NNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVL 443
Query: 182 DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALE 241
++P D ++SW ++I+G G EAL+
Sbjct: 444 QQLPSRD-------------------------------VVSWTAMISGCSSLGHESEALD 472
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
EM Q V+P+ T +S L ACA ++ G+ +HS ++N +V +G+AL++MY
Sbjct: 473 FLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYA 532
Query: 302 KCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVG 361
KCG V +AF +F+ MPEK+ +W AMI +A +G +A ME G + + F
Sbjct: 533 KCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFAT 592
Query: 362 LLSACAHSGL---VEQGRWCF 379
+LS C L VE C+
Sbjct: 593 ILSTCGDIELDEAVESSATCY 613
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 10/187 (5%)
Query: 32 KRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIR 91
K +H QI+ N + Y T + C K G A NV + + D+ + MI
Sbjct: 405 KELHAQII--KNSIEKNVYIGSTLVWLYC---KCGESRDAFNVLQQLPSRDVVSWTAMIS 459
Query: 92 AYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVK 151
+ + H A+ K+M+ +G+ PN T+ +K C G +H+ K
Sbjct: 460 GCSSLG-----HESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKK 514
Query: 152 FGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDL 211
LS+VF G++LI++Y CG +S A ++FD +P ++V+W +M++GY RNG AL L
Sbjct: 515 NHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKL 574
Query: 212 FRKMNGK 218
+M +
Sbjct: 575 MYRMEAE 581
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 109/235 (46%), Gaps = 30/235 (12%)
Query: 290 VVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMER 349
+ G L++ + G + A ++F+ MPEK+T WTAMI + +GL +AF F + +
Sbjct: 117 IYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVK 176
Query: 350 AGVK-PNHVTFVGLLSACAHSGLVEQGRWCFDVMKRV----YLIEPQ-VYHYACMVDLLS 403
G++ N FV LL+ C+ E GR M +V ++E VY YA +L S
Sbjct: 177 HGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTS 236
Query: 404 RARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMN 463
R FD M E DV W A++ C G+ G K I + NH F N
Sbjct: 237 ALRAFD--------MMEEKDVISWTAVISACSRKGH---GIKAIGMFIGM--LNHWFLPN 283
Query: 464 ---LCDIYG-----KAGRFDAAKRIRNLLKERRVQKKI-PGCSMIEINGVVQEFS 509
+C I KA RF +++ +L+ +R ++ + G S++++ E S
Sbjct: 284 EFTVCSILKACSEEKALRF--GRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEIS 336
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 184/414 (44%), Gaps = 47/414 (11%)
Query: 2 TMIS--LIESKSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYH--LITRLL 57
TMIS I S+ L L ++ K L+ K +H +L S N H LI
Sbjct: 305 TMISEEKIYPNSVILTTILP-VLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDL-- 361
Query: 58 FSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCD 117
+ K G VF+ + + ++ YA D R++V ++ +
Sbjct: 362 ----YCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFD--QALRSIVWMQQ---E 412
Query: 118 GIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNA 177
G P+ +T ++ C G+ +H +K FL +V SL+ +Y CG+
Sbjct: 413 GFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGV---- 468
Query: 178 RKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAK 237
E P+ LF ++ +N+ +W ++I V+ +
Sbjct: 469 ----PEYPIR-----------------------LFDRLEQRNVKAWTAMIDCYVENCDLR 501
Query: 238 EALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALV 297
+E+F M +PD +T+ VL+ C+ L A+ GK +H ++ + E + ++
Sbjct: 502 AGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARII 561
Query: 298 NMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHV 357
MYGKCG ++ A F+ + K + WTA+I + + L A +CF +M G PN
Sbjct: 562 KMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTF 621
Query: 358 TFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDES 411
TF +LS C+ +G V++ F++M R+Y ++P HY+ +++LL+R +E+
Sbjct: 622 TFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 117/520 (22%), Positives = 223/520 (42%), Gaps = 85/520 (16%)
Query: 1 MTMISLIESKSLTLK-NALSRLIEQC---KNLRELKRIHTQILTSPNLHSSDQYHLITRL 56
+T++ +E + + + S L+E C K+L K++H I N S+++ L T+L
Sbjct: 96 LTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRI--NGLESNEF-LRTKL 152
Query: 57 LFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLC 116
+ ++ GS A VF + ++ +N ++R G + + + + +M
Sbjct: 153 VHM--YTACGSVKDAQKVFDESTSSNVYSWNALLR---GTVISGKKRYQDVLSTFTEMRE 207
Query: 117 DGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSN 176
G+ N + + K G HA +K G + VF SL+++Y CG +
Sbjct: 208 LGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGL 267
Query: 177 ARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLA 236
AR++FDEI D+V W +M+ G N AL LFR M
Sbjct: 268 ARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTM--------------------- 306
Query: 237 KEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYL--RRNGIECDVVIGT 294
+ + + P+ + + ++L + A+ GK VH+++ +N +E + +
Sbjct: 307 ---------ISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVE-QPFVHS 356
Query: 295 ALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKP 354
L+++Y KCG + +F +++ +WTA++S +A +G +A + M++ G +P
Sbjct: 357 GLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRP 416
Query: 355 NHVTFVGLLSACAHSGLVEQGR--WCFDVMKRVYLIEPQVYHYACMVDLLSRA------- 405
+ VT +L CA ++QG+ C+ +K ++L P V ++ + S+
Sbjct: 417 DVVTIATVLPVCAELRAIKQGKEIHCY-ALKNLFL--PNVSLVTSLMVMYSKCGVPEYPI 473
Query: 406 RLFDE------------------------SVILIRSMPM---EPDVYVWGALLGGCQMHG 438
RLFD + + R M + PD G +L C
Sbjct: 474 RLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLK 533
Query: 439 NVELGEKVALHLIDLEPHNHAFY-MNLCDIYGKAGRFDAA 477
++LG+++ H++ E + F + +YGK G +A
Sbjct: 534 ALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSA 573
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 174/412 (42%), Gaps = 71/412 (17%)
Query: 118 GIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNA 177
GI N TF L++ C R G+ VH + G S+ F L+++Y CG + +A
Sbjct: 106 GIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDA 165
Query: 178 RKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAK 237
+K+FDE N+ SWN+++ G V G +
Sbjct: 166 QKVFDE-------------------------------STSSNVYSWNALLRGTVISGKKR 194
Query: 238 --EALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTA 295
+ L F EM+++ V + ++++V + A A+ G H+ +NG+ V + T+
Sbjct: 195 YQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTS 254
Query: 296 LVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEM-ERAGVKP 354
LV+MY KCG V A +F+E+ E+D W AMI+ A + W+A F M + P
Sbjct: 255 LVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYP 314
Query: 355 NHVTFVGLLSACA---------------------------HSGLVEQGRWCFDVM--KRV 385
N V +L HSGL++ C D+ +RV
Sbjct: 315 NSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRV 374
Query: 386 YLIEPQ---VYHYACMVDLLSRARLFDE---SVILIRSMPMEPDVYVWGALLGGCQMHGN 439
+ Q + A M + R FD+ S++ ++ PDV +L C
Sbjct: 375 FYGSKQRNAISWTALMSGYAANGR-FDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRA 433
Query: 440 VELGEKVALH-LIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQ 490
++ G+++ + L +L N + +L +Y K G + R+ + L++R V+
Sbjct: 434 IKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVK 485
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 20/205 (9%)
Query: 239 ALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVN 298
AL + ++Q + + T +++L AC + ++ HGK VH ++R NG+E + + T LV+
Sbjct: 95 ALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVH 154
Query: 299 MYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLG--WKAFDCFLEMERAGVKPNH 356
MY CG V+ A ++F+E + +W A++ + G F EM GV N
Sbjct: 155 MYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNV 214
Query: 357 VTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDL--------LSRARLF 408
+ + + A + + QG + + L V+ +VD+ L+R R+F
Sbjct: 215 YSLSNVFKSFAGASALRQGLKTHALAIKNGLFN-SVFLKTSLVDMYFKCGKVGLAR-RVF 272
Query: 409 DESVILIRSMPMEPDVYVWGALLGG 433
DE V E D+ VWGA++ G
Sbjct: 273 DEIV--------ERDIVVWGAMIAG 289
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 120/226 (53%), Gaps = 4/226 (1%)
Query: 230 LVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECD 289
L Q L K+A+EL + PD+ + +CA L +++H K VH + ++ D
Sbjct: 215 LCQRRLYKDAIELLDK----GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGD 270
Query: 290 VVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMER 349
+ +++M+G+C + A +F+ M +KD +W M+ ++ +G+G A F EM +
Sbjct: 271 PKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTK 330
Query: 350 AGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFD 409
G+KPN TF+ + ACA G +E+ FD MK + I P+ HY ++ +L +
Sbjct: 331 HGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLV 390
Query: 410 ESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEP 455
E+ IR +P EP W A+ ++HG+++L + + ++D++P
Sbjct: 391 EAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDP 436
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 38/232 (16%)
Query: 110 LYK---KMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLIN 166
LYK ++L G P+ F L + C + VH ++ F D N +I+
Sbjct: 220 LYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVIS 279
Query: 167 LYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSI 226
++ C +++A+++FD M K++ SW+ +
Sbjct: 280 MFGECSSITDAKRVFDH-------------------------------MVDKDMDSWHLM 308
Query: 227 ITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVH--SYLRRN 284
+ G+ +AL LF EM + +KP++ T +V ACA +G I+ ++H S +
Sbjct: 309 MCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEA-FLHFDSMKNEH 367
Query: 285 GIECDVVIGTALVNMYGKCGLVQQAFEIFEEMP-EKDTSAWTAMISVFALHG 335
GI ++ + GKCG + +A + ++P E W AM + LHG
Sbjct: 368 GISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHG 419
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 111/217 (51%), Gaps = 1/217 (0%)
Query: 231 VQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDV 290
+QG +EA+E+ ++ D I + + C + A++ + VH + CDV
Sbjct: 96 IQGNW-REAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDV 154
Query: 291 VIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERA 350
A++ MY C V A ++FEEMPE ++ M+ F +G G +A D F +
Sbjct: 155 GARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEE 214
Query: 351 GVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDE 410
G KPN F + S C +G V++G F M R Y I P + HY + +L+ + DE
Sbjct: 215 GNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDE 274
Query: 411 SVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVA 447
++ + MPMEP V VW L+ ++HG+VELG++ A
Sbjct: 275 ALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCA 311
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 174/376 (46%), Gaps = 35/376 (9%)
Query: 60 CSFSKYGSFTYATNVFHMI----NNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKML 115
+ +YG T A +F + ++ +I AY G G+ + A+ ++ M
Sbjct: 241 STLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAY-GRSGLHEE----AISVFNSMK 295
Query: 116 CDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKF-------GFLSDVFNGNSLINLY 168
G+ PN +T+ +I C + G + QV KF G D NSL+ +
Sbjct: 296 EYGLRPNLVTYNAVIDACGK------GGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVC 349
Query: 169 MTCGLLSNARKLFDEIP----VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NI 220
GL AR LFDE+ DV ++N+++ + G +D A ++ +M K N+
Sbjct: 350 SRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNV 409
Query: 221 ISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSY 280
+S++++I G + G EAL LF EM+ + + D+++ ++LS ++G + +
Sbjct: 410 VSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILRE 469
Query: 281 LRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFALHGL 336
+ GI+ DVV AL+ YGK G + ++F EM + + ++ +I ++ GL
Sbjct: 470 MASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGL 529
Query: 337 GWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYA 396
+A + F E + AG++ + V + L+ A +GLV D M + I P V Y
Sbjct: 530 YKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG-ISPNVVTYN 588
Query: 397 CMVDLLSRARLFDESV 412
++D R+ D S
Sbjct: 589 SIIDAFGRSATMDRSA 604
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 182/446 (40%), Gaps = 117/446 (26%)
Query: 58 FSCSFSKYGS---FTYATNVFHMINN----PDLRVYNIMIRAYAGMDGVDDRHFCRAMVL 110
FS S YG A +VF+ + P+L YN +I A G G++ F +
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGME---FKQVAKF 326
Query: 111 YKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMT 170
+ +M +G+ P+ +TF L+ C+R + + ++ DVF+ N+L++
Sbjct: 327 FDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 171 CGLLSNARKLFDEIPV----TDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNI----IS 222
G + A ++ ++PV +VV++++++ G+ + G D AL+LF +M I +S
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 223 WNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLR 282
+N++++ + G ++EAL++ EM + +K D +T ++L + G D K V + ++
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 283 RN-----------------------------------GIECDVVIGTALVNMYGKCGLVQ 307
R G+ DVV+ +AL++ K GLV
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVG 566
Query: 308 QAFEIFEEMPEKDTS----AWTAMISVF-----------------------ALHGL---- 336
A + +EM ++ S + ++I F AL L
Sbjct: 567 SAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETE 626
Query: 337 -------------------------GWKAFDCFLE----MERAGVKPNHVTFVGLLSACA 367
G + C LE M + +KPN VTF +L+AC+
Sbjct: 627 GNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACS 686
Query: 368 HSGLVEQGRWCFDVMKRVYLIEPQVY 393
E + ++ L + +VY
Sbjct: 687 RCNSFEDASMLLEELR---LFDNKVY 709
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 18/232 (7%)
Query: 259 ASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPE 318
++++S + G + K + G V +AL++ YG+ GL ++A +F M E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 319 ----KDTSAWTAMISVFALHGLGWKAFDCFL-EMERAGVKPNHVTFVGLLSACAHSGLVE 373
+ + A+I G+ +K F EM+R GV+P+ +TF LL+ C+ GL E
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 374 QGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME---PDVYVWGAL 430
R FD M IE V+ Y ++D + + D + ++ MP++ P+V + +
Sbjct: 357 AARNLFDEMTN-RRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 431 LGGCQMHGNVE-----LGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAA 477
+ G G + GE L + + Y L IY K GR + A
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIA----LDRVSYNTLLSIYTKVGRSEEA 463
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 126/289 (43%), Gaps = 44/289 (15%)
Query: 82 DLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGAS 141
D+ YN ++ Y D+ ++ +M + + PN LT+ LI G ++
Sbjct: 478 DVVTYNALLGGYGKQGKYDE-----VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 142 GEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP----VTDVVTWNSMVI 197
+ + G +DV ++LI+ GL+ +A L DE+ +VVT+NS++
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592
Query: 198 GYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQ----------GGLAKEA-------- 239
+ R+ +D + D NG ++ +S ++ L + G L E+
Sbjct: 593 AFGRSATMDRSADY---SNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDC 649
Query: 240 ----------LELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECD 289
LE+F +M Q+ +KP+ +T +++L+AC++ + + + LR +
Sbjct: 650 EEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVY 709
Query: 290 VVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGW 338
V+ L+ L QA +F+++ E D S +A + AL + W
Sbjct: 710 GVVHGLLMGQRENVWL--QAQSLFDKVNEMDGSTASAFYN--ALTDMLW 754
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 108/222 (48%)
Query: 234 GLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIG 293
G K+AL + ++ D + + C + + K VH + + D+
Sbjct: 233 GKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSN 292
Query: 294 TALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVK 353
L+ MY CGL +A +FE+M EK+ W +I FA +G G A D F + G
Sbjct: 293 HVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNI 352
Query: 354 PNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVI 413
P+ F G+ AC G V++G F+ M R Y I P + Y +V++ + DE++
Sbjct: 353 PDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALE 412
Query: 414 LIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEP 455
+ MPMEP+V VW L+ ++HGN+ELG+ A + L+P
Sbjct: 413 FVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDP 454
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 3/149 (2%)
Query: 190 VTWNSMVIGYLRNGGLDN-ALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQ 248
++ N +++ N GL N A +F KM+ KN+ +W II + G ++A+++F ++
Sbjct: 289 LSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKE 348
Query: 249 ISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRN-GIECDVVIGTALVNMYGKCGLVQ 307
PD + AC LG +D G + R+ GI + +LV MY G +
Sbjct: 349 EGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLD 408
Query: 308 QAFEIFEEMP-EKDTSAWTAMISVFALHG 335
+A E E MP E + W ++++ +HG
Sbjct: 409 EALEFVERMPMEPNVDVWETLMNLSRVHG 437
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 209/469 (44%), Gaps = 36/469 (7%)
Query: 64 KYGSFTYATNVFHMINNP----DLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGI 119
K G + A N+F+ + D+ Y +I A+A + + A+ ++KKM DG
Sbjct: 185 KEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFA-----NSGRYREAVNVFKKMEEDGC 239
Query: 120 FPNCLTFPFLI----KGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLS 175
P +T+ ++ K T W S + ++ G D + N+LI L
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKITS---LVEKMKSDGIAPDAYTYNTLITCCKRGSLHQ 296
Query: 176 NARKLFDEIPVT----DVVTWNSMVIGYLRNGGLDNALDLFRKM--NG--KNIISWNSII 227
A ++F+E+ D VT+N+++ Y ++ A+ + +M NG +I+++NS+I
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 228 TGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIE 287
+ + G+ EA+EL ++M + KPD T ++LS + G ++ + +R G +
Sbjct: 357 SAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK 416
Query: 288 CDVVIGTALVNMYGKCGLVQQAFEIFEEMP----EKDTSAWTAMISVFALHGLGWKAFDC 343
++ A + MYG G + +IF+E+ D W +++VF +G+ +
Sbjct: 417 PNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGV 476
Query: 344 FLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLS 403
F EM+RAG P TF L+SA + G EQ + M + P + Y ++ L+
Sbjct: 477 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG-VTPDLSTYNTVLAALA 535
Query: 404 RARLFDESVILIRSMP---MEPDVYVWGALLGGCQMHGNVELGEKVALHLID--LEPHNH 458
R ++++S ++ M +P+ + +LL + L +A + +EP
Sbjct: 536 RGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPR-A 594
Query: 459 AFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGC-SMIEINGVVQ 506
L + K A+R + LKER I SM+ I G Q
Sbjct: 595 VLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQ 643
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 131/305 (42%), Gaps = 42/305 (13%)
Query: 61 SFSKYGSFTYATNVFH-MIN---NPDLRVYNIMIRAYA--GM------------DG---V 99
++S+ GSF A V+ M++ PDL YN ++ A A GM DG
Sbjct: 498 AYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKP 557
Query: 100 DDRHFCRAMVLY-------------KKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVH 146
++ +C + Y +++ I P + L+ C++ E
Sbjct: 558 NELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAF 617
Query: 147 AQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP----VTDVVTWNSMVIGYLRN 202
+++ + GF D+ NS++++Y +++ A + D + + T+NS++ + R+
Sbjct: 618 SELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRS 677
Query: 203 GGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITI 258
+ ++ R++ K +IIS+N++I + ++A +F EM+ + PD IT
Sbjct: 678 ADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITY 737
Query: 259 ASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPE 318
+ + + A + V Y+ ++G + ++V+ Y K +A E++
Sbjct: 738 NTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN 797
Query: 319 KDTSA 323
D A
Sbjct: 798 LDPHA 802
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 163/341 (47%), Gaps = 20/341 (5%)
Query: 164 LINLYMTCGLLSNARKLFDEIPVT----DVVTWNSMVIGYLRNGGLDNALDLFRKMNGK- 218
+I+L GLL ++FDE+P V ++ +++ Y RNG + +L+L +M +
Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEK 206
Query: 219 ---NIISWNSIITGLVQGGLAKEAL-ELFHEMQQISVKPDKITIASVLSACAQLGAIDHG 274
+I+++N++I +GGL E L LF EM+ ++PD +T ++LSACA G D
Sbjct: 207 ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEA 266
Query: 275 KWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPE----KDTSAWTAMISV 330
+ V + GI D+ + LV +GK +++ ++ EM D +++ ++
Sbjct: 267 EMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEA 326
Query: 331 FALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEP 390
+A G +A F +M+ AG PN T+ LL+ SG + R F MK +P
Sbjct: 327 YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN-TDP 385
Query: 391 QVYHYACMVDLLSRARLFDESVILIRSM---PMEPDVYVWGALLGGCQMHGNVELGEKVA 447
Y ++++ F E V L M +EPD+ + ++ C G E K+
Sbjct: 386 DAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKIL 445
Query: 448 LHLI--DLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKE 486
++ D+ P + A Y + + +G+A ++ A N + E
Sbjct: 446 QYMTANDIVPSSKA-YTGVIEAFGQAALYEEALVAFNTMHE 485
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 107/473 (22%), Positives = 199/473 (42%), Gaps = 70/473 (14%)
Query: 26 KNLRELKRIHTQILTSPNLH-SSDQYHLITR--LLFSC--SFSKYGSFTYATNVFHMINN 80
++LR K + QI PN H + L+ R LL C F + S + +VF
Sbjct: 123 RSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFS---- 178
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTR----W 136
Y +I AY G +G + ++ L +M + I P+ LT+ +I C R W
Sbjct: 179 -----YTALINAY-GRNG----RYETSLELLDRMKNEKISPSILTYNTVINACARGGLDW 228
Query: 137 MDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF----DEIPVTDVVTW 192
+G G + A++ G D+ N+L++ GL A +F D V D+ T+
Sbjct: 229 -EGLLG--LFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTY 285
Query: 193 NSMVIGYLRNGGLDNALDLFRKMNG----KNIISWNSIITGLVQGGLAKEALELFHEMQQ 248
+ +V + + L+ DL +M +I S+N ++ + G KEA+ +FH+MQ
Sbjct: 286 SHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQA 345
Query: 249 ISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQ 308
P+ T + +L+ Q G D + + ++ + + D L+ ++G+ G ++
Sbjct: 346 AGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKE 405
Query: 309 AFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAH 368
+F +M E++ ++P+ T+ G++ AC
Sbjct: 406 VVTLFHDMVEEN-------------------------------IEPDMETYEGIIFACGK 434
Query: 369 SGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSM---PMEPDVY 425
GL E R M ++ P Y +++ +A L++E+++ +M P +
Sbjct: 435 GGLHEDARKILQYMTANDIV-PSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIE 493
Query: 426 VWGALLGGCQMHGNVELGEKVALHLIDLE-PHNHAFYMNLCDIYGKAGRFDAA 477
+ +LL G V+ E + L+D P N + + Y + G+F+ A
Sbjct: 494 TFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEA 546
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 144/324 (44%), Gaps = 26/324 (8%)
Query: 203 GGLDNALDLFRKMNGKNIISWNS---IITGLVQGGLAKEALELFHEMQ-QISVKPDKITI 258
G + LD+F KN +S N + G + +L LF MQ QI KP++
Sbjct: 90 GSIARCLDIF-----KNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIY 144
Query: 259 ASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPE 318
++S + G +D V + G+ V TAL+N YG+ G + + E+ + M
Sbjct: 145 TIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKN 204
Query: 319 KDTS----AWTAMISVFALHGLGWKA-FDCFLEMERAGVKPNHVTFVGLLSACAHSGLVE 373
+ S + +I+ A GL W+ F EM G++P+ VT+ LLSACA GL +
Sbjct: 205 EKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGD 264
Query: 374 QGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME---PDVYVWGAL 430
+ F M ++ P + Y+ +V+ + R ++ L+ M PD+ + L
Sbjct: 265 EAEMVFRTMNDGGIV-PDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVL 323
Query: 431 LGGCQMHGNVE--LGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERR 488
L G+++ +G + P N Y L +++G++GR+D +R L E +
Sbjct: 324 LEAYAKSGSIKEAMGVFHQMQAAGCTP-NANTYSVLLNLFGQSGRYD---DVRQLFLEMK 379
Query: 489 VQKKIPGCSMIEINGVVQEFSAGG 512
P + I +++ F GG
Sbjct: 380 SSNTDPDAATYNI--LIEVFGEGG 401
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 165/387 (42%), Gaps = 57/387 (14%)
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIK--GCTRWMD 138
PD+ YN ++ A A + G+ D A ++++ M GI P+ T+ L++ G R ++
Sbjct: 245 PDIVTYNTLLSACA-IRGLGDE----AEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLE 299
Query: 139 GASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVT----DVVTWNS 194
+ ++ G L D+ + N L+ Y G + A +F ++ + T++
Sbjct: 300 KVCDLL--GEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSV 357
Query: 195 MVIGYLRNGGLDNALDLFRKMNGKNI----ISWNSIITGLVQGGLAKEALELFHEMQQIS 250
++ + ++G D+ LF +M N ++N +I +GG KE + LFH+M + +
Sbjct: 358 LLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN 417
Query: 251 VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAF 310
++PD T ++ AC + G + + + Y+ N I T ++ +G+ L ++A
Sbjct: 418 IEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEAL 477
Query: 311 EIFEEMPE---------------------------------------KDTSAWTAMISVF 331
F M E ++ + A I +
Sbjct: 478 VAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAY 537
Query: 332 ALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQ 391
G +A +++ME++ P+ T +LS + + LV++ R F+ MK ++ P
Sbjct: 538 KQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDIL-PS 596
Query: 392 VYHYACMVDLLSRARLFDESVILIRSM 418
+ Y M+ + + +D+ L+ M
Sbjct: 597 IMCYCMMLAVYGKTERWDDVNELLEEM 623
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 133/321 (41%), Gaps = 33/321 (10%)
Query: 19 SRLIEQCKNLRELKRIHT---QILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVF 75
S L+E LR L+++ ++ + +L Y+++ +++K GS A VF
Sbjct: 286 SHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLE-----AYAKSGSIKEAMGVF 340
Query: 76 HMIN----NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIK 131
H + P+ Y++++ + DD L+ +M P+ T+ LI+
Sbjct: 341 HQMQAAGCTPNANTYSVLLNLFGQSGRYDD-----VRQLFLEMKSSNTDPDAATYNILIE 395
Query: 132 GCTRWMDGASGEIV--HAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDV 189
G E+V +V+ D+ +I GL +ARK+ + D+
Sbjct: 396 VFGE--GGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDI 453
Query: 190 VTWNSMVIGYLRNGG----LDNALDLFRKMN--GKN--IISWNSIITGLVQGGLAKEALE 241
V + G + G + AL F M+ G N I +++S++ +GGL KE+
Sbjct: 454 VPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEA 513
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGT--ALVNM 299
+ + + ++ T + + A Q G + V +Y+ CD T A++++
Sbjct: 514 ILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEA--VKTYVDMEKSRCDPDERTLEAVLSV 571
Query: 300 YGKCGLVQQAFEIFEEMPEKD 320
Y LV + E FEEM D
Sbjct: 572 YSFARLVDECREQFEEMKASD 592
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 113/249 (45%), Gaps = 21/249 (8%)
Query: 80 NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDG 139
+PD YNI+I + + +F + L+ M+ + I P+ T+ +I C + G
Sbjct: 384 DPDAATYNILIEVFG-----EGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK---G 435
Query: 140 ASGEIVHAQVVKFGFLSDVFNGNS----LINLYMTCGLLSNARKLFDEI----PVTDVVT 191
E +++++ +D+ + +I + L A F+ + + T
Sbjct: 436 GLHEDAR-KILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 494
Query: 192 WNSMVIGYLRNGGLDNALDLFRKM--NG--KNIISWNSIITGLVQGGLAKEALELFHEMQ 247
++S++ + R G + + + ++ +G +N ++N+ I QGG +EA++ + +M+
Sbjct: 495 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME 554
Query: 248 QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQ 307
+ PD+ T+ +VLS + +D + ++ + I ++ ++ +YGK
Sbjct: 555 KSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWD 614
Query: 308 QAFEIFEEM 316
E+ EEM
Sbjct: 615 DVNELLEEM 623
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 159/337 (47%), Gaps = 28/337 (8%)
Query: 65 YGSFTYATNVFHMINN----PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF 120
Y + A N+F ++N P++ YN +IR D A L M+ I
Sbjct: 268 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD-----ASRLLSDMIERKIN 322
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
PN +TF LI + E ++ +++K D+F +SLIN + L A+ +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 181 FDEIPVTD----VVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQ 232
F+ + D VVT+N+++ G+ + ++ ++LFR+M+ + N +++N++I GL Q
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 233 GGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVI 292
G A ++F +M V PD IT + +L + G ++ V YL+++ +E D+
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 293 GTALVNMYGKCGLVQQAFEIFEEMPEKDTSA----WTAMISVFALHGLGWKAFDCFLEME 348
++ K G V+ +++F + K +T MIS F GL +A F EM+
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 349 RAGVKPNHVTFVGLLSA-------CAHSGLVEQGRWC 378
G PN T+ L+ A A + L+++ R C
Sbjct: 563 EDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSC 599
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 165/356 (46%), Gaps = 32/356 (8%)
Query: 82 DLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIK---GCTRWMD 138
D+ +Y +I A V+D A+ L+ +M GI PN +T+ LI+ RW D
Sbjct: 254 DVVIYTTIIDALCNYKNVND-----ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 308
Query: 139 GASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPV----TDVVTWNS 194
+ + + +++ +V ++LI+ ++ G L A KL+DE+ D+ T++S
Sbjct: 309 ASR---LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365
Query: 195 MVIGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQIS 250
++ G+ + LD A +F M K N++++N++I G + +E +ELF EM Q
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425
Query: 251 VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAF 310
+ + +T +++ Q G D + + + +G+ D++ + L++ K G +++A
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485
Query: 311 EIFEEMP----EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSAC 366
+FE + E D + MI G +D F + GVKPN + + ++S
Sbjct: 486 VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 545
Query: 367 AHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFD----ESVILIRSM 418
GL E+ F MK E + + L RARL D S LI+ M
Sbjct: 546 CRKGLKEEADALFREMK-----EDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 181/402 (45%), Gaps = 19/402 (4%)
Query: 102 RHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNG 161
+ A+ L +M PN +TF LI G + + ++V G D+F
Sbjct: 164 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY 223
Query: 162 NSLINLYMTCGLLSNARKLFDEIPV----TDVVTWNSMVIGYLRNGGLDNALDLFRKMNG 217
+++N G + A L ++ DVV + +++ +++AL+LF +M+
Sbjct: 224 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN 283
Query: 218 K----NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDH 273
K N++++NS+I L G +A L +M + + P+ +T ++++ A + G +
Sbjct: 284 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 274 GKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKD----TSAWTAMIS 329
+ ++ + + I+ D+ ++L+N + + +A +FE M KD + +I
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 330 VFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIE 389
F + + F EM + G+ N VT+ L+ +G + + F M +
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG-VP 462
Query: 390 PQVYHYACMVDLLSRARLFDESVIL---IRSMPMEPDVYVWGALLGGCQMHGNVELGEKV 446
P + Y+ ++D L + ++++++ ++ MEPD+Y + ++ G G VE G +
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 447 --ALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKE 486
+L L ++P N Y + + + G + A + +KE
Sbjct: 523 FCSLSLKGVKP-NVIIYTTMISGFCRKGLKEEADALFREMKE 563
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 135/309 (43%), Gaps = 30/309 (9%)
Query: 157 DVFNGNSLIN-------LYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNAL 209
D+++ N LIN L + +L KL E D+VT +S++ GY + A+
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYE---PDIVTLSSLLNGYCHGKRISEAV 170
Query: 210 DLFRKM----NGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSAC 265
L +M N +++N++I GL A EA+ L M +PD T +V++
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230
Query: 266 AQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DT 321
+ G ID + + + IE DVVI T +++ V A +F EM K +
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
Query: 322 SAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSG-LVEQGRWCFD 380
+ ++I +G A +M + PN VTF L+ A G LVE + +
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 381 VMKRVYLIEPQVYHYA------CMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGC 434
++KR I+P ++ Y+ CM D L A+ E +I S P+V + L+ G
Sbjct: 351 MIKRS--IDPDIFTYSSLINGFCMHDRLDEAKHMFELMI---SKDCFPNVVTYNTLIKGF 405
Query: 435 QMHGNVELG 443
VE G
Sbjct: 406 CKAKRVEEG 414
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 166/368 (45%), Gaps = 23/368 (6%)
Query: 145 VHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTD----VVTWNSMVIGYL 200
V +++K G+ D+ +SL+N Y +S A L D++ V + VT+N+++ G
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 196
Query: 201 RNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKI 256
+ A+ L +M + ++ ++ +++ GL + G AL L +M++ ++ D +
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256
Query: 257 TIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEM 316
+++ A ++ + + + GI +VV +L+ G A + +M
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 317 PEK----DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSA-CAHSGL 371
E+ + ++A+I F G +A + EM + + P+ T+ L++ C H L
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 372 VEQGRWCFDVM--KRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME---PDVYV 426
++ + F++M K + P V Y ++ +A+ +E + L R M +
Sbjct: 377 -DEAKHMFELMISKDCF---PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Query: 427 WGALLGGCQMHGNVELGEKVALHLI-DLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLK 485
+ L+ G G+ ++ +K+ ++ D P + Y L D K G+ + A + L+
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 486 ERRVQKKI 493
+ +++ I
Sbjct: 493 KSKMEPDI 500
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 209/454 (46%), Gaps = 28/454 (6%)
Query: 85 VYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGAS-GE 143
V+++++++Y+ + +D +A+ + G P L++ ++ R S E
Sbjct: 136 VFDLVVKSYSRLSLID-----KALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAE 190
Query: 144 IVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP----VTDVVTWNSMVIGY 199
V ++++ +VF N LI + G + A LFD++ + +VVT+N+++ GY
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250
Query: 200 LRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDK 255
+ +D+ L R M K N+IS+N +I GL + G KE + EM + D+
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
Query: 256 ITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEE 315
+T +++ + G +H+ + R+G+ V+ T+L++ K G + +A E ++
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 316 M------PEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHS 369
M P + T +T ++ F+ G +A+ EM G P+ VT+ L++ +
Sbjct: 371 MRVRGLCPNERT--YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 370 GLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSM---PMEPDVYV 426
G +E + MK L P V Y+ ++ R+ DE++ + R M ++PD
Sbjct: 429 GKMEDAIAVLEDMKEKGL-SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 427 WGALLGG-CQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLK 485
+ +L+ G C+ E + L P + Y L + Y G + A ++ N +
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 486 ERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMK 519
E+ V + S++ ING+ ++ + L +K
Sbjct: 548 EKGVLPDVVTYSVL-INGLNKQSRTREAKRLLLK 580
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 181/404 (44%), Gaps = 27/404 (6%)
Query: 67 SFTYATNVF-HMINN---PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPN 122
+ ++A NVF M+ + P++ YNI+IR + +D A+ L+ KM G PN
Sbjct: 185 NISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNID-----VALTLFDKMETKGCLPN 239
Query: 123 CLTFPFLIKGCTRWMDGASG-EIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLF 181
+T+ LI G + G +++ + +K G ++ + N +IN G + +
Sbjct: 240 VVTYNTLIDGYCKLRKIDDGFKLLRSMALK-GLEPNLISYNVVINGLCREGRMKEVSFVL 298
Query: 182 DEIP----VTDVVTWNSMVIGYLRNGGLDNAL----DLFRKMNGKNIISWNSIITGLVQG 233
E+ D VT+N+++ GY + G AL ++ R ++I++ S+I + +
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 234 GLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIG 293
G A+E +M+ + P++ T +++ +Q G ++ V + NG VV
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 294 TALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFALHGLGWKAFDCFLEMER 349
AL+N + G ++ A + E+M EK D +++ ++S F +A EM
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 350 AGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFD 409
G+KP+ +T+ L+ ++ ++ M RV L P + Y +++ +
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL-PPDEFTYTALINAYCMEGDLE 537
Query: 410 ESVILIRSMPME---PDVYVWGALLGGCQMHGNVELGEKVALHL 450
+++ L M + PDV + L+ G +++ L L
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 143/300 (47%), Gaps = 19/300 (6%)
Query: 82 DLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKG-CTRWMDGA 140
D YN +I+ Y + +F +A+V++ +ML G+ P+ +T+ LI C
Sbjct: 309 DEVTYNTLIKGYC-----KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNR 363
Query: 141 SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP----VTDVVTWNSMV 196
+ E + V+ G + +L++ + G ++ A ++ E+ VVT+N+++
Sbjct: 364 AMEFLDQMRVR-GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 197 IGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQISVK 252
G+ G +++A+ + M K +++S++++++G + EAL + EM + +K
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 253 PDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEI 312
PD IT +S++ + ++ + R G+ D TAL+N Y G +++A ++
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 313 FEEMPEK----DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAH 368
EM EK D ++ +I+ +A L++ P+ VT+ L+ C++
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 188/423 (44%), Gaps = 38/423 (8%)
Query: 43 NLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMD--GVD 100
NL +D L TR++ S FT +V +N Y+++I + M G+
Sbjct: 61 NLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNR-----YDVVISLFEQMQILGIP 115
Query: 101 ---------------DRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIV 145
CRA KM+ G P+ +TF L+ G W +
Sbjct: 116 PLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIAL 175
Query: 146 HAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVT----DVVTWNSMVIGYLR 201
Q++ GF +V +LI L++A +LF+++ +VVT+N++V G
Sbjct: 176 FDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCE 235
Query: 202 NGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKIT 257
G +A L R M + N+I++ ++I V+ G EA EL++ M Q+SV PD T
Sbjct: 236 IGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFT 295
Query: 258 IASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMP 317
S+++ G +D + + + RNG + VI T L++ + K V+ +IF EM
Sbjct: 296 YGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMS 355
Query: 318 EK----DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVE 373
+K +T +T +I + L G A + F +M P+ T+ LL +G VE
Sbjct: 356 QKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVE 415
Query: 374 QGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSM---PMEPDVYVWGAL 430
+ F+ M++ + + + Y ++ + + +++ L S+ M+P+V + +
Sbjct: 416 KALMIFEYMRKREM-DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTM 474
Query: 431 LGG 433
+ G
Sbjct: 475 ISG 477
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 146/318 (45%), Gaps = 23/318 (7%)
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCT---RWM 137
P++ Y +IR +RH A+ L+ +M +G PN +T+ L+ G RW
Sbjct: 186 PNVVTYTTLIRCLC-----KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 138 DGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFD---EIPV-TDVVTWN 193
D A + ++K +V +LI+ ++ G L A++L++ ++ V DV T+
Sbjct: 241 DAAW---LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYG 297
Query: 194 SMVIGYLRNGGLDNALDLFRKM--NG--KNIISWNSIITGLVQGGLAKEALELFHEMQQI 249
S++ G G LD A +F M NG N + + ++I G + ++ +++F+EM Q
Sbjct: 298 SLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK 357
Query: 250 SVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQA 309
V + IT ++ +G D + V + + D+ L++ G V++A
Sbjct: 358 GVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKA 417
Query: 310 FEIFEEMPEKDTS----AWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSA 365
IFE M +++ +T +I G AFD F + G+KPN +T+ ++S
Sbjct: 418 LMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISG 477
Query: 366 CAHSGLVEQGRWCFDVMK 383
GL+ + F MK
Sbjct: 478 FCRRGLIHEADSLFKKMK 495
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 158/368 (42%), Gaps = 41/368 (11%)
Query: 200 LRNG----GLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQISV 251
LRNG ++ALDLF +M +II + +++ + + + LF +MQ + +
Sbjct: 55 LRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGI 114
Query: 252 KPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFE 311
P T V+ + + G E D+V T+L+N Y ++ A
Sbjct: 115 PPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIA 174
Query: 312 IFEEMP----EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACA 367
+F+++ + + +T +I + A + F +M G +PN VT+ L++
Sbjct: 175 LFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVT--- 231
Query: 368 HSGLVEQGRW------CFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIR---SM 418
GL E GRW D+MKR IEP V + ++D + E+ L M
Sbjct: 232 --GLCEIGRWGDAAWLLRDMMKR--RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQM 287
Query: 419 PMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEP--HNHAFYMNLCDIYGKAGRFDA 476
+ PDV+ +G+L+ G M+G ++ ++ +L++ N Y L + K+ R +
Sbjct: 288 SVYPDVFTYGSLINGLCMYGLLDEARQM-FYLMERNGCYPNEVIYTTLIHGFCKSKRVED 346
Query: 477 AKRIRNLLKERRVQKK-------IPGCSMIEINGVVQE-FSAGGSSELP--MKDLVLILD 526
+I + ++ V I G ++ V QE F+ S P ++ ++LD
Sbjct: 347 GMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406
Query: 527 RLCNEMKI 534
LC K+
Sbjct: 407 GLCCNGKV 414
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 110/237 (46%), Gaps = 17/237 (7%)
Query: 61 SFSKYGSFTYATNVFHMINN----PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLC 116
+F K G A +++++ PD+ Y +I M G+ D A ++ M
Sbjct: 267 AFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC-MYGLLDE----ARQMFYLMER 321
Query: 117 DGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSN 176
+G +PN + + LI G + G + ++ + G +++ LI Y G
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDV 381
Query: 177 ARKLFDEIPV----TDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSIIT 228
A+++F+++ D+ T+N ++ G NG ++ AL +F M + NI+++ II
Sbjct: 382 AQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQ 441
Query: 229 GLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNG 285
G+ + G ++A +LF + +KP+ IT +++S + G I + ++ +G
Sbjct: 442 GMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Query: 65 YGSFTYATNVFHMINN----PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIF 120
YG A +F+++ P+ +Y +I + V+D M ++ +M G+
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVED-----GMKIFYEMSQKGVV 360
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
N +T+ LI+G + V Q+ D+ N L++ G + A +
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 181 FD-----EIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGLV 231
F+ E+ + ++VT+ ++ G + G +++A DLF + K N+I++ ++I+G
Sbjct: 421 FEYMRKREMDI-NIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC 479
Query: 232 QGGLAKEALELFHEMQQISVKPDK 255
+ GL EA LF +M++ P++
Sbjct: 480 RRGLIHEADSLFKKMKEDGFLPNE 503
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 150/318 (47%), Gaps = 23/318 (7%)
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIK---GCTRWM 137
P + +YN +I A V+D A+ L+ +M GI PN +T+ LI+ RW
Sbjct: 254 PGVVIYNTIIDALCNYKNVND-----ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 308
Query: 138 DGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPV----TDVVTWN 193
D + + + +++ +V ++LI+ ++ G L A KL+DE+ D+ T++
Sbjct: 309 DASR---LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 365
Query: 194 SMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQI 249
S++ G+ + LD A +F M K N++++N++I G + E +ELF EM Q
Sbjct: 366 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425
Query: 250 SVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQA 309
+ + +T +++ Q D+ + V + +G+ D++ + L++ G V+ A
Sbjct: 426 GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Query: 310 FEIFEEMP----EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSA 365
+FE + E D + MI G +D F + GVKPN VT+ ++S
Sbjct: 486 LVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 545
Query: 366 CAHSGLVEQGRWCFDVMK 383
GL E+ F MK
Sbjct: 546 FCRKGLKEEADALFREMK 563
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 186/441 (42%), Gaps = 60/441 (13%)
Query: 104 FCR------AMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSD 157
FCR A+ + KM+ G P+ +T L+ G + + Q+V+ G+ D
Sbjct: 126 FCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPD 185
Query: 158 VFNGNSLINLYMTCGLLSNARKLFDEIPVT----DVVTWNSMVIGYLRNGGLDNALDLFR 213
F N+LI+ S A L D + V D+VT+ +V G + G +D AL L +
Sbjct: 186 SFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLK 245
Query: 214 KM-NGK---NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLG 269
KM GK ++ +N+II L +AL LF EM ++P+ +T S++ G
Sbjct: 246 KMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 305
Query: 270 AIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWT 325
+ S + I +VV +AL++ + K G + +A ++++EM ++ D ++
Sbjct: 306 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 365
Query: 326 AMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRV 385
++I+ F +H +A F M PN VT+ L+ + V++G F M +
Sbjct: 366 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425
Query: 386 YLIEPQVYHYACMVDLLSRARLFDESVILIRSM--------------------------- 418
L+ V Y ++ +AR D + I+ + M
Sbjct: 426 GLVGNTV-TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484
Query: 419 -----------PMEPDVYVWGALLGGCQMHGNVELGEKV--ALHLIDLEPHNHAFYMNLC 465
MEPD+Y + ++ G G VE G + +L L ++P N Y +
Sbjct: 485 ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP-NVVTYTTMM 543
Query: 466 DIYGKAGRFDAAKRIRNLLKE 486
+ + G + A + +KE
Sbjct: 544 SGFCRKGLKEEADALFREMKE 564
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 152/357 (42%), Gaps = 30/357 (8%)
Query: 99 VDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDV 158
++D A+ L+ M+ FP+ + F L+ + + Q+ G ++
Sbjct: 57 LNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 116
Query: 159 FNGNSLIN-------LYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDL 211
+ + LIN L + +L+ KL E D+VT NS++ G+ + +A+ L
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYE---PDIVTLNSLLNGFCHGNRISDAVSL 173
Query: 212 FRKM----NGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQ 267
+M + ++N++I GL + A EA+ L M +PD +T V++ +
Sbjct: 174 VGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK 233
Query: 268 LGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSA 323
G ID + + + IE VVI +++ V A +F EM K +
Sbjct: 234 RGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 293
Query: 324 WTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSG-LVEQGRWCFDVM 382
+ ++I +G A +M + PN VTF L+ A G LVE + +++
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 383 KRVYLIEPQVYHYA------CMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGG 433
KR I+P ++ Y+ CM D L A+ E +I S P+V + L+ G
Sbjct: 354 KRS--IDPDIFTYSSLINGFCMHDRLDEAKHMFELMI---SKDCFPNVVTYNTLIKG 405
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 123/268 (45%), Gaps = 17/268 (6%)
Query: 61 SFSKYGSFTYATNVF-HMIN---NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLC 116
+F K G A ++ MI +PD+ Y+ +I + D +D+ A +++ M+
Sbjct: 335 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE-----AKHMFELMIS 389
Query: 117 DGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSN 176
FPN +T+ LIKG + G + ++ + G + + +LI+ + N
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN 449
Query: 177 ARKLFDEIP----VTDVVTWNSMVIGYLRNGGLDNALDLF----RKMNGKNIISWNSIIT 228
A+ +F ++ + D++T++ ++ G NG ++ AL +F R +I ++N +I
Sbjct: 450 AQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIE 509
Query: 229 GLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIEC 288
G+ + G ++ +LF + VKP+ +T +++S + G + + ++ G
Sbjct: 510 GMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLP 569
Query: 289 DVVIGTALVNMYGKCGLVQQAFEIFEEM 316
D L+ + + G + E+ EM
Sbjct: 570 DSGTYNTLIRAHLRDGDKAASAELIREM 597
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 149/323 (46%), Gaps = 21/323 (6%)
Query: 175 SNARKLFDEIPVT----DVVTWNSMVIGYLRNGGLDNALDLFRKMN----GKNIISWNSI 226
S A KL D+IP+ DV + +++ Y R G + A+DLF +M ++++N I
Sbjct: 192 SVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVI 251
Query: 227 ITGLVQGGLA-KEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNG 285
+ + G + ++ L + EM+ +K D+ T ++VLSACA+ G + K + L+ G
Sbjct: 252 LDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCG 311
Query: 286 IECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFALHGLGWKAF 341
E V AL+ ++GK G+ +A + +EM E D+ + +++ + G +A
Sbjct: 312 YEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAA 371
Query: 342 DCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDL 401
M + GV PN +T+ ++ A +G ++ F MK + P Y ++ L
Sbjct: 372 GVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCV-PNTCTYNAVLSL 430
Query: 402 LSRARLFDESVILI---RSMPMEPDVYVWGALLGGCQMHGNVELGEKV--ALHLIDLEPH 456
L + +E + ++ +S P+ W +L C G + +V + EP
Sbjct: 431 LGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPD 490
Query: 457 NHAFYMNLCDIYGKAG-RFDAAK 478
F L YG+ G DA+K
Sbjct: 491 RDTFN-TLISAYGRCGSEVDASK 512
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 149/361 (41%), Gaps = 21/361 (5%)
Query: 61 SFSKYGSFTYATNVFH----MINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLC 116
++S+ G + A ++F M +P L YN+++ + M R + + + + +M
Sbjct: 219 AYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMG----RSWRKILGVLDEMRS 274
Query: 117 DGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSN 176
G+ + T ++ C R + A++ G+ N+L+ ++ G+ +
Sbjct: 275 KGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTE 334
Query: 177 ARKLFDEIP----VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSIIT 228
A + E+ D VT+N +V Y+R G A + M K N I++ ++I
Sbjct: 335 ALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVID 394
Query: 229 GLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIEC 288
+ G EAL+LF+ M++ P+ T +VLS + + + ++ NG
Sbjct: 395 AYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSP 454
Query: 289 DVVIGTALVNMYGKCGLVQQAFEIFEEMP----EKDTSAWTAMISVFALHGLGWKAFDCF 344
+ ++ + G G+ + +F EM E D + +IS + G A +
Sbjct: 455 NRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMY 514
Query: 345 LEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSR 404
EM RAG T+ LL+A A G G MK +P Y+ M+ ++
Sbjct: 515 GEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF-KPTETSYSLMLQCYAK 573
Query: 405 A 405
Sbjct: 574 G 574
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 134/319 (42%), Gaps = 23/319 (7%)
Query: 188 DVVTWNSMVIGYLRNGGLDNALDLFRKMNG----KNIISWNSIITGLVQGGLAKEALELF 243
D T ++++ R G L A + F ++ +++N+++ + G+ EAL +
Sbjct: 280 DEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVL 339
Query: 244 HEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKC 303
EM++ S D +T +++A + G V + + G+ + + T +++ YGK
Sbjct: 340 KEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKA 399
Query: 304 GLVQQAFEIFEEMPE----KDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
G +A ++F M E +T + A++S+ + +M+ G PN T+
Sbjct: 400 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATW 459
Query: 360 VGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSR-------ARLFDESV 412
+L+ C + G+ + F MK EP + ++ R ++++ E
Sbjct: 460 NTMLALCGNKGMDKFVNRVFREMKSCGF-EPDRDTFNTLISAYGRCGSEVDASKMYGE-- 516
Query: 413 ILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLID--LEPHNHAFYMNLCDIYGK 470
+ V + ALL G+ GE V + +P ++ + L Y K
Sbjct: 517 --MTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML-QCYAK 573
Query: 471 AGRFDAAKRIRNLLKERRV 489
G + +RI N +KE ++
Sbjct: 574 GGNYLGIERIENRIKEGQI 592
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 151/326 (46%), Gaps = 25/326 (7%)
Query: 113 KMLCD----GIFPNCLTFPFLIKGC-TRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINL 167
KMLCD G PN T+ ++ C + MD + ++ GF D N+LI+
Sbjct: 442 KMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFR-EMKSCGFEPDRDTFNTLISA 500
Query: 168 YMTCGLLSNARKLFDEIPVTD----VVTWNSMVIGYLRNGGLDNALDLFRKMNGKNI--- 220
Y CG +A K++ E+ V T+N+++ R G + ++ M K
Sbjct: 501 YGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPT 560
Query: 221 -ISWNSIITGLVQGG--LAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWV 277
S++ ++ +GG L E +E + +++ + P + + ++L A + A+ +
Sbjct: 561 ETSYSLMLQCYAKGGNYLGIERIE--NRIKEGQIFPSWMLLRTLLLANFKCRALAGSERA 618
Query: 278 HSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPE----KDTSAWTAMISVFAL 333
+ +++G + D+VI ++++++ + + QA I E + E D + +++ ++
Sbjct: 619 FTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVR 678
Query: 334 HGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQG-RWCFDVMKRVYLIEPQV 392
G WKA + +E++ +KP+ V++ ++ GL+++ R ++ +R I P +
Sbjct: 679 RGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG--IRPCI 736
Query: 393 YHYACMVDLLSRARLFDESVILIRSM 418
+ Y V + +F E +I M
Sbjct: 737 FTYNTFVSGYTAMGMFAEIEDVIECM 762
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 289 DVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTS----AWTAMISVFALHGLGW-KAFDC 343
DV T +++ Y + G ++A ++FE M E S + ++ VF G W K
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 344 FLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLS 403
EM G+K + T +LSACA GL+ + + F +K EP Y ++ +
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGY-EPGTVTYNALLQVFG 327
Query: 404 RARLFDESVILIRSMPMEP---DVYVWGALLGGCQMHGNVELGEKVALHLIDLEPH---- 456
+A ++ E++ +++ M D + L+ G K A +I++
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAG----FSKEAAGVIEMMTKKGVM 383
Query: 457 -NHAFYMNLCDIYGKAGRFDAAKRIRNLLKE 486
N Y + D YGKAG+ D A ++ +KE
Sbjct: 384 PNAITYTTVIDAYGKAGKEDEALKLFYSMKE 414
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/306 (19%), Positives = 130/306 (42%), Gaps = 41/306 (13%)
Query: 44 LHSSDQYHLITRLLFSCSFSKY----------GSFTYATNVFHMINN----PDLRVYNIM 89
+ +S Y +TR F+ + Y G + NV + + P Y++M
Sbjct: 508 VDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLM 567
Query: 90 IRAYA------GMDGVDDRHFCRAMVLYKKMLCDG-IFPNCLTFPFLIKGCTRWMDGASG 142
++ YA G++ +++R + +G IFP+ + L+ + A
Sbjct: 568 LQCYAKGGNYLGIERIENR------------IKEGQIFPSWMLLRTLLLANFKCRALAGS 615
Query: 143 EIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP----VTDVVTWNSMVIG 198
E K G+ D+ NS+++++ + A + + I D+VT+NS++
Sbjct: 616 ERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDM 675
Query: 199 YLRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPD 254
Y+R G A ++ + + +++S+N++I G + GL +EA+ + EM + ++P
Sbjct: 676 YVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPC 735
Query: 255 KITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFE 314
T + +S +G + V + +N + + +V+ Y + G +A +
Sbjct: 736 IFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVS 795
Query: 315 EMPEKD 320
++ D
Sbjct: 796 KIKTFD 801
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 154/320 (48%), Gaps = 14/320 (4%)
Query: 113 KMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCG 172
KM+ G P+ +TF LI G + Q+V+ G DV ++I+ G
Sbjct: 132 KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG 191
Query: 173 LLSNARKLFDEIP----VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISWN 224
++ A LFD++ DVV + S+V G +G +A L R M + ++I++N
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251
Query: 225 SIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRN 284
++I V+ G +A EL++EM ++S+ P+ T S+++ G +D + + +
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
Query: 285 GIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFALHGLGWKA 340
G DVV T+L+N + KC V A +IF EM +K +T +T +I F G A
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 341 FDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYL--IEPQVYHYACM 398
+ F M GV PN T+ LL ++G V++ F+ M++ + + P ++ Y +
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431
Query: 399 VDLLSRARLFDESVILIRSM 418
+ L ++++++ M
Sbjct: 432 LHGLCYNGKLEKALMVFEDM 451
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 152/357 (42%), Gaps = 61/357 (17%)
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKG-CT--RWM 137
PD+ +Y +I + + H A+ L+ +M GI P+ + + L+ G C RW
Sbjct: 175 PDVVMYTTIIDSLC-----KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 138 DGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP----VTDVVTWN 193
D S + + K DV N+LI+ ++ G +A +L++E+ ++ T+
Sbjct: 230 DADS---LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYT 286
Query: 194 SMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQI 249
S++ G+ G +D A +F M K +++++ S+I G + +A+++F+EM Q
Sbjct: 287 SLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346
Query: 250 SVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQA 309
+ + IT +++ Q+G + + V S++ G+ ++ L++ G V++A
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406
Query: 310 FEIFEEMPEKDTSAWTAMISVFA--LHGLGWK---------------------------- 339
IFE+M +++ I + LHGL +
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTII 466
Query: 340 ------------AFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKR 384
A + F + GVKPN VT+ ++S GL + F MK
Sbjct: 467 IQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 114/258 (44%), Gaps = 9/258 (3%)
Query: 238 EALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALV 297
EAL+LF M + P I +L+ A++ D + +L+ G+ D+ L+
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 298 NMYGKCGLVQQAFEIFEEMP----EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVK 353
N + + A +M E D +T++I+ F L +A +M G+K
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 354 PNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVI 413
P+ V + ++ + +G V FD M+ Y I P V Y +V+ L + + ++
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMEN-YGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 414 LIRSM---PMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAF-YMNLCDIYG 469
L+R M ++PDV + AL+ G E++ +I + + F Y +L + +
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 470 KAGRFDAAKRIRNLLKER 487
G D A+++ L++ +
Sbjct: 294 MEGCVDEARQMFYLMETK 311
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 165/355 (46%), Gaps = 27/355 (7%)
Query: 49 QYHLITRLLFSCSFSKYGSFTYATNVFHMIN----NPDLRVYNIMIRAYAGMDGVDDRHF 104
Q +L+T + K G A N+ + + D+ ++N +I + VDD
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD--- 278
Query: 105 CRAMVLYKKMLCDGIFPNCLTFPFLIKG-CT--RWMDGASGEIVHAQVVKFGFLSDVFNG 161
A+ L+K+M GI PN +T+ LI C+ RW D + + + +++ ++
Sbjct: 279 --ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ---LLSDMIEKKINPNLVTF 333
Query: 162 NSLINLYMTCGLLSNARKLFDEIPV----TDVVTWNSMVIGYLRNGGLDNALDLFRKMNG 217
N+LI+ ++ G A KL+D++ D+ T+NS+V G+ + LD A +F M
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393
Query: 218 KN----IISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDH 273
K+ ++++N++I G + ++ ELF EM + D +T +++ G D+
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 453
Query: 274 GKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMIS 329
+ V + +G+ D++ + L++ G +++A E+F+ M + D +T MI
Sbjct: 454 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 513
Query: 330 VFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKR 384
G +D F + GVKPN VT+ ++S L+++ MK
Sbjct: 514 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 156/343 (45%), Gaps = 16/343 (4%)
Query: 106 RAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLI 165
A+ L +M+ G PN +T+ ++ G + D + ++ +DV N++I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 166 NLYMTCGLLSNARKLFDEIPVT----DVVTWNSMVIGYLRNGGLDNALDLFRKMNGK--- 218
+ + +A LF E+ +VVT++S++ G +A L M K
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 219 -NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWV 277
N++++N++I V+ G EA +L+ +M + S+ PD T S+++ +D K +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 278 HSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFAL 333
++ DVV L+ + K V+ E+F EM + DT +T +I
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 334 HGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVY 393
G A F +M GV P+ +T+ LL ++G +E+ FD M++ I+ +Y
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE-IKLDIY 506
Query: 394 HYACMVDLLSRARLFDESVILIRSMPM---EPDVYVWGALLGG 433
Y M++ + +A D+ L S+ + +P+V + ++ G
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 549
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 155/335 (46%), Gaps = 25/335 (7%)
Query: 57 LFSCSFSKYGSFTYATNVF-HMIN---NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYK 112
L SC YG ++ A+ + MI NP+L +N +I A+ V + F A LY
Sbjct: 301 LISC-LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF-----VKEGKFVEAEKLYD 354
Query: 113 KMLCDGIFPNCLTFPFLIKG-CTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTC 171
M+ I P+ T+ L+ G C + ++ V K F DV N+LI +
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF-PDVVTYNTLIKGFCKS 413
Query: 172 GLLSNARKLFDEIP----VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISW 223
+ + +LF E+ V D VT+ +++ G +G DNA +F++M +I+++
Sbjct: 414 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 473
Query: 224 NSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRR 283
+ ++ GL G ++ALE+F MQ+ +K D +++ + G +D G + L
Sbjct: 474 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 533
Query: 284 NGIECDVVIGTALVNMYGKCGLVQQAFEIFEEM----PEKDTSAWTAMISVFALHGLGWK 339
G++ +VV +++ L+Q+A+ + ++M P ++ + +I G
Sbjct: 534 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAA 593
Query: 340 AFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQ 374
+ + EM R+ + +GL++ H G +++
Sbjct: 594 SAELIREM-RSCRFVGDASTIGLVANMLHDGRLDK 627
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 156/377 (41%), Gaps = 48/377 (12%)
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGA 140
P + +N ++ A A M + F + L +KM I T+ LI R +
Sbjct: 83 PSIVEFNKLLSAIAKM-----KKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQIS 137
Query: 141 SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYL 200
+ +++K G+ + +SL+N Y +S+A L D++ + +GY
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM----------VEMGYR 187
Query: 201 RNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIAS 260
+ I++ ++I GL A EA+ L M Q +P+ +T
Sbjct: 188 -----------------PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 261 VLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK- 319
V++ + G D + + + IE DVVI +++ K V A +F+EM K
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290
Query: 320 ---DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSG-LVEQG 375
+ ++++IS +G A +M + PN VTF L+ A G VE
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 376 RWCFDVMKRVYLIEPQVYHYA------CMVDLLSRARLFDESVILIRSMPMEPDVYVWGA 429
+ D++KR I+P ++ Y CM D L +A+ E ++ S PDV +
Sbjct: 351 KLYDDMIKRS--IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV---SKDCFPDVVTYNT 405
Query: 430 LLGGCQMHGNVELGEKV 446
L+ G VE G ++
Sbjct: 406 LIKGFCKSKRVEDGTEL 422
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 136/310 (43%), Gaps = 17/310 (5%)
Query: 200 LRNG----GLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQISV 251
LRNG LD+A+ LF M +I+ +N +++ + + + L +MQ++ +
Sbjct: 57 LRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEI 116
Query: 252 KPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFE 311
T +++ + I + + + G E +V ++L+N Y + A
Sbjct: 117 VHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 312 IFEEMPE----KDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACA 367
+ ++M E DT +T +I LH +A M + G +PN VT+ +++
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 368 HSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP---MEPDV 424
G + + M+ IE V + ++D L + R D+++ L + M + P+V
Sbjct: 237 KRGDTDLALNLLNKMEAAK-IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 295
Query: 425 YVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMN-LCDIYGKAGRFDAAKRIRNL 483
+ +L+ +G ++ +I+ + + + N L D + K G+F A+++ +
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355
Query: 484 LKERRVQKKI 493
+ +R + I
Sbjct: 356 MIKRSIDPDI 365
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 2/219 (0%)
Query: 227 ITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGI 286
+ + + G K+A+E+ + D + + C A+ K VH ++ +
Sbjct: 153 LDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVG 212
Query: 287 ECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLE 346
D+ +++ MY CG V+ A +F MPE++ W +I FA +G G A D F
Sbjct: 213 ISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSR 272
Query: 347 MERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRAR 406
++ G KP+ F + AC G + +G F+ M + Y I P + HY +V +L+
Sbjct: 273 FKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPG 332
Query: 407 LFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEK 445
DE++ + S MEP+V +W L+ ++HG++ LG++
Sbjct: 333 YLDEALRFVES--MEPNVDLWETLMNLSRVHGDLILGDR 369
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Query: 184 IPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELF 243
+ ++D+ +NS++ Y G +++AL +F M +N+ +W +I + G ++A++ F
Sbjct: 211 VGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTF 270
Query: 244 HEMQQISVKPDKITIASVLSACAQLGAIDHGKW-VHSYLRRNGIECDVVIGTALVNMYGK 302
+Q KPD + AC LG ++ G S + GI + +LV M +
Sbjct: 271 SRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAE 330
Query: 303 CGLVQQAFEIFEEMPEKDTSAWTAMISVFALHG 335
G + +A E M E + W ++++ +HG
Sbjct: 331 PGYLDEALRFVESM-EPNVDLWETLMNLSRVHG 362
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 200/476 (42%), Gaps = 65/476 (13%)
Query: 62 FSKYGSFTYATNVFHMINN----PDLRVYNIMIRAY--AGMDGVDDRHFCRAM------- 108
F K G A ++F ++ PDL Y+ +I Y AGM G+ + F +A+
Sbjct: 296 FCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355
Query: 109 ---------------------VLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEI--V 145
V+YK+MLC GI PN +T+ LIKG + DG E +
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ--DGRIYEAFGM 413
Query: 146 HAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEI-----PVTDVVTWNSMVIGYL 200
+ Q++K G + +SLI+ + CG L + L++++ P DVV + +V G
Sbjct: 414 YGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP-PDVVIYGVLVDGLS 472
Query: 201 RNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKI 256
+ G + +A+ KM G+ N++ +NS+I G + EAL++F M +KPD
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 257 TIASVLSACAQLGAI-DH-----GKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAF 310
T +V+ A H G + ++RN I D+ + ++++ KC ++ A
Sbjct: 533 TFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS 592
Query: 311 EIF----EEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSAC 366
+ F E E D + MI + +A F ++ PN VT L+
Sbjct: 593 KFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 652
Query: 367 AHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP---MEPD 423
+ ++ F +M +P Y C++D S++ + S L M + P
Sbjct: 653 CKNNDMDGAIRMFSIMAEKG-SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPS 711
Query: 424 VYVWGALLGGCQMHGNVELGEKVALHLID--LEPHNHAFYMNLCDIYGKAGRFDAA 477
+ + ++ G G V+ + ID L P A Y L Y K GR A
Sbjct: 712 IVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA-YAILIRGYCKVGRLVEA 766
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 107/455 (23%), Positives = 192/455 (42%), Gaps = 45/455 (9%)
Query: 68 FTYATNVFHMINNPDLRVYNIMIRAYAGMDGVD--DRHF---CRAMVLYKKMLCDGIFPN 122
F Y+T + +I P VY M+ + G D VD HF CR + + G +
Sbjct: 169 FVYSTQLGVVI--PQDSVYR-MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLD 225
Query: 123 CLTFPFLIKGCTRWMDGASGEIVHAQVVKFGF------LSDVFNGNSLINLYMTCGLLSN 176
L F T+ +D H V++ GF + V G S+ + + LLS
Sbjct: 226 AL---FCKGEVTKALD------FHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLS- 275
Query: 177 ARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNI----ISWNSIITGLVQ 232
+ D P +VVT+ +++ G+ + G +D A DLF+ M + I I+++++I G +
Sbjct: 276 --LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFK 333
Query: 233 GGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVI 292
G+ +LF + VK D + +S + + G + V+ + GI +VV
Sbjct: 334 AGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVT 393
Query: 293 GTALVNMYGKCGLVQQAF----EIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEME 348
T L+ + G + +AF +I + E ++++I F G F + +M
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 349 RAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLF 408
+ G P+ V + L+ + GL+ F V I V + ++D R F
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMR-FSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 409 DESVILIRSM---PMEPDVYVWGALLGGCQMHGNV--ELGEKVALHLIDLEPHNH-AFYM 462
DE++ + R M ++PDV + ++ M + + L L DL N + +
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADI 572
Query: 463 NLCDIY----GKAGRFDAAKRIRNLLKERRVQKKI 493
+C++ K R + A + N L E +++ I
Sbjct: 573 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 607
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 118/280 (42%), Gaps = 47/280 (16%)
Query: 25 CKNLRELKRIHTQILTSPNLHSSDQY--HLITRLLFSCSFSKYGSFTYATNVFHMINNPD 82
CK+++ + L N S+D +++ LLF C + S + N+ PD
Sbjct: 548 CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS-KFFNNLIEGKMEPD 606
Query: 83 LRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRW--MDGA 140
+ YN MI Y + +D+ A +++ + PN +T LI + MDGA
Sbjct: 607 IVTYNTMICGYCSLRRLDE-----AERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA 661
Query: 141 SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYL 200
+ F +++ G NA VT+ ++ +
Sbjct: 662 --------IRMFSIMAEK-------------GSKPNA------------VTYGCLMDWFS 688
Query: 201 RNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKI 256
++ ++ + LF +M K +I+S++ II GL + G EA +FH+ + PD +
Sbjct: 689 KSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVV 748
Query: 257 TIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTAL 296
A ++ ++G + ++ ++ RNG++ D ++ AL
Sbjct: 749 AYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 158/324 (48%), Gaps = 23/324 (7%)
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKG---CTRWM 137
PD+ YN +I + V+D A +K++ GI PN +T+ L+ G +RW
Sbjct: 188 PDIVAYNAIIDSLCKTKRVND-----AFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 138 DGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPV----TDVVTWN 193
D A + + ++K +V ++L++ ++ G + A++LF+E+ D+VT++
Sbjct: 243 DAAR---LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 194 SMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQI 249
S++ G + +D A +F M K +++S+N++I G + ++ ++LF EM Q
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Query: 250 SVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQA 309
+ + +T +++ Q G +D + S + GI D+ L+ G +++A
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
Query: 310 FEIFEEMPEK----DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSA 365
IFE+M ++ D +T +I G +A+ F + G+KP+ VT+ ++S
Sbjct: 420 LVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Query: 366 CAHSGLVEQGRWCFDVMKRVYLIE 389
GL+ + + MK+ L++
Sbjct: 480 LCTKGLLHEVEALYTKMKQEGLMK 503
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 172/372 (46%), Gaps = 21/372 (5%)
Query: 82 DLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGAS 141
DL +NI+I + V A+ + KML G P+ +T L+ G R +
Sbjct: 119 DLYTFNIVINCFCCCFQVS-----LALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173
Query: 142 GEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVT----DVVTWNSMVI 197
+ ++V+ G+ D+ N++I+ +++A F EI +VVT+ ++V
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 198 GYLRNGGLDNAL----DLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKP 253
G + +A D+ +K N+I++++++ V+ G EA ELF EM ++S+ P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 254 DKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIF 313
D +T +S+++ ID + + G DVV L+N + K V+ ++F
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 314 EEMPEK----DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHS 369
EM ++ +T + +I F G KA + F +M+ G+ P+ T+ LL +
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413
Query: 370 GLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP---MEPDVYV 426
G +E+ F+ M++ + + + Y ++ + + +E+ L S+ ++PD+
Sbjct: 414 GELEKALVIFEDMQKREM-DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472
Query: 427 WGALLGGCQMHG 438
+ ++ G G
Sbjct: 473 YTTMMSGLCTKG 484
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 159/350 (45%), Gaps = 16/350 (4%)
Query: 107 AMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLIN 166
A+ L+ M+ FP+ + F L+ + + ++ G +D++ N +IN
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 167 LYMTCGLLSNARKLFDEIPV----TDVVTWNSMVIGYLRNGGLDNALDLFRKM----NGK 218
+ C +S A + ++ D VT S+V G+ R + +A+ L KM
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 219 NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVH 278
+I+++N+II L + +A + F E+++ ++P+ +T ++++ +
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 279 SYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMP----EKDTSAWTAMISVFALH 334
S + + I +V+ +AL++ + K G V +A E+FEEM + D ++++I+ LH
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 335 GLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYH 394
+A F M G + V++ L++ + VE G F M + L+ V
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV-T 367
Query: 395 YACMVDLLSRARLFDESVILIRSMP---MEPDVYVWGALLGGCQMHGNVE 441
Y ++ +A D++ M + PD++ + LLGG +G +E
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 122/264 (46%), Gaps = 25/264 (9%)
Query: 61 SFSKYGSFTYATNVFH----MINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLC 116
+F K G A +F M +PD+ Y+ +I D +D+ A ++ M+
Sbjct: 269 AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE-----ANQMFDLMVS 323
Query: 117 DGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSN 176
G + +++ LI G + G + ++ + G +S+ N+LI + G +
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383
Query: 177 ARKLFDEIPV----TDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSIIT 228
A++ F ++ D+ T+N ++ G NG L+ AL +F M + +I+++ ++I
Sbjct: 384 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 443
Query: 229 GLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGI-- 286
G+ + G +EA LF + +KPD +T +++S G + + +++ +++ G+
Sbjct: 444 GMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMK 503
Query: 287 -EC-----DVVIGTALVNMYGKCG 304
+C D+ + L+ CG
Sbjct: 504 NDCTLSDGDITLSAELIKKMLSCG 527
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 167/391 (42%), Gaps = 69/391 (17%)
Query: 49 QYHLITRLLFSCSFSKYGSFTYATNVFHMINN----PDLRVYNIMIRAYAGMDGVDDRHF 104
Q L+T + K G A N+ + + P + +YN +I +DD
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD--- 274
Query: 105 CRAMVLYKKMLCDGIFPNCLTFPFLIK---GCTRWMDGASGEIVHAQVVKFGFLSDVFNG 161
A+ L+K+M GI PN +T+ LI RW D + + + +++ DVF
Sbjct: 275 --ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR---LLSDMIERKINPDVFTF 329
Query: 162 NSLINLYMTCGLLSNARKLFDEIP------------------------------------ 185
++LI+ ++ G L A KL+DE+
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Query: 186 ---VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKE 238
DVVT+N+++ G+ + ++ +++FR+M+ + N +++N +I GL Q G
Sbjct: 390 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 449
Query: 239 ALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVN 298
A E+F EM V P+ +T ++L + G ++ V YL+R+ +E + ++
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Query: 299 MYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKP 354
K G V+ +++F + K D A+ MIS F G +A F EM+ G P
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Query: 355 NHVTFVGLLSACAHSG-------LVEQGRWC 378
N + L+ A G L+++ R C
Sbjct: 570 NSGCYNTLIRARLRDGDREASAELIKEMRSC 600
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 192/434 (44%), Gaps = 24/434 (5%)
Query: 102 RHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNG 161
+ A+ L +M G PN +TF LI G + + ++V G D+
Sbjct: 165 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 224
Query: 162 NSLINLYMTCGLLSNARKLFDEIPV----TDVVTWNSMVIGYLRNGGLDNALDLFRKMNG 217
++N G A L +++ V+ +N+++ G + +D+AL+LF++M
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 284
Query: 218 K----NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDH 273
K N+++++S+I+ L G +A L +M + + PD T ++++ A + G +
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344
Query: 274 GKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMIS 329
+ ++ + + I+ +V ++L+N + + +A ++FE M K D + +I
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK 404
Query: 330 VFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIE 389
F + + + F EM + G+ N VT+ L+ +G + + F M +
Sbjct: 405 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG-VP 463
Query: 390 PQVYHYACMVDLLSRARLFDESVIL---IRSMPMEPDVYVWGALLGGCQMHGNVELGEKV 446
P + Y ++D L + ++++++ ++ MEP +Y + ++ G G VE G +
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 447 --ALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIP--GCSMIEIN 502
L L ++P A+ + K + +A L KE + +P GC I
Sbjct: 524 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA----LFKEMKEDGTLPNSGCYNTLIR 579
Query: 503 GVVQEFSAGGSSEL 516
+++ S+EL
Sbjct: 580 ARLRDGDREASAEL 593
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 156/335 (46%), Gaps = 25/335 (7%)
Query: 57 LFSCSFSKYGSFTYATNVFH-MIN---NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYK 112
L SC YG ++ A+ + MI NPD+ ++ +I A+ V + A LY
Sbjct: 297 LISC-LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF-----VKEGKLVEAEKLYD 350
Query: 113 KMLCDGIFPNCLTFPFLIKG-CTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTC 171
+M+ I P+ +T+ LI G C + ++ V K F DV N+LI +
Sbjct: 351 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKY 409
Query: 172 GLLSNARKLFDEIP----VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISW 223
+ ++F E+ V + VT+N ++ G + G D A ++F++M NI+++
Sbjct: 410 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469
Query: 224 NSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRR 283
N+++ GL + G ++A+ +F +Q+ ++P T ++ + G ++ G + L
Sbjct: 470 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL 529
Query: 284 NGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDT----SAWTAMISVFALHGLGWK 339
G++ DVV +++ + + G ++A +F+EM E T + +I G
Sbjct: 530 KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREA 589
Query: 340 AFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQ 374
+ + EM G + T +GL++ H G +++
Sbjct: 590 SAELIKEMRSCGFAGDAST-IGLVTNMLHDGRLDK 623
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 152/320 (47%), Gaps = 31/320 (9%)
Query: 82 DLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIK---GCTRWMD 138
D+ +YN +I +DD A L+ KM GI P+ T+ LI RW D
Sbjct: 249 DVVIYNTIIDGLCKYKHMDD-----AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSD 303
Query: 139 GASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVT-----DVVTWN 193
+ + + +++ D+ N+LI+ ++ G L A KL+DE+ + DVV +N
Sbjct: 304 ASR---LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYN 360
Query: 194 SMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQI 249
+++ G+ + ++ +++FR+M+ + N +++ ++I G Q A +F +M
Sbjct: 361 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 420
Query: 250 SVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQA 309
V PD +T +L G ++ V Y+++ ++ D+V T ++ K G V+
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 310 FEIFEEMPEK----DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSA 365
+++F + K + +T M+S F GL +A F+EM+ G PN T+ L+ A
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Query: 366 -------CAHSGLVEQGRWC 378
A + L+++ R C
Sbjct: 541 RLRDGDEAASAELIKEMRSC 560
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 153/355 (43%), Gaps = 27/355 (7%)
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGA 140
PDL Y +I D A+ L KM I + + + +I G ++
Sbjct: 213 PDLVTYGAVINGLCKRGEPD-----LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMD 267
Query: 141 SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVT----DVVTWNSMV 196
+ ++ G DVF N LI+ G S+A +L ++ D+V +N+++
Sbjct: 268 DAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALI 327
Query: 197 IGYLRNGGLDNALDLFRKMNGK-----NIISWNSIITGLVQGGLAKEALELFHEMQQISV 251
+++ G L A L+ +M +++++N++I G + +E +E+F EM Q +
Sbjct: 328 DAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGL 387
Query: 252 KPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFE 311
+ +T +++ Q D+ + V + +G+ D++ L++ G V+ A
Sbjct: 388 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALV 447
Query: 312 IFEEMPEKDTS----AWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACA 367
+FE M ++D +T MI G +D F + GVKPN VT+ ++S
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Query: 368 HSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFD----ESVILIRSM 418
GL E+ F MK + P Y ++ RARL D S LI+ M
Sbjct: 508 RKGLKEEADALFVEMKEDGPL-PNSGTYNTLI----RARLRDGDEAASAELIKEM 557
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 176/404 (43%), Gaps = 23/404 (5%)
Query: 62 FSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCR------AMVLYKKML 115
FSK S N F ++ + ++ N+ I + +FCR A+ + KM+
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 116 CDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLS 175
G P+ +T L+ G + + Q+V+ G+ D +L++ S
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 176 NARKLFDEIPVT----DVVTWNSMVIGYLRNGGLDNALDLFRKM-NGK---NIISWNSII 227
A L + + V D+VT+ +++ G + G D AL+L KM GK +++ +N+II
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 228 TGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIE 287
GL + +A +LF++M+ +KPD T ++S G + S + I
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 288 CDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK-----DTSAWTAMISVFALHGLGWKAFD 342
D+V AL++ + K G + +A ++++EM + D A+ +I F + + +
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 343 CFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLL 402
F EM + G+ N VT+ L+ + + + F M + P + Y ++D L
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG-VHPDIMTYNILLDGL 436
Query: 403 SRARLFDESVILIRSMP---MEPDVYVWGALLGGCQMHGNVELG 443
+ ++++ M M+ D+ + ++ G VE G
Sbjct: 437 CNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 163/355 (45%), Gaps = 27/355 (7%)
Query: 49 QYHLITRLLFSCSFSKYGSFTYATNVFHMIN----NPDLRVYNIMIRAYAGMDGVDDRHF 104
Q +L+T + K G A N+ + + D+ ++N +I + VDD
Sbjct: 147 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD--- 203
Query: 105 CRAMVLYKKMLCDGIFPNCLTFPFLIKG-CT--RWMDGASGEIVHAQVVKFGFLSDVFNG 161
A+ L+K+M GI PN +T+ LI C+ RW D + + + +++ ++
Sbjct: 204 --ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ---LLSDMIEKKINPNLVTF 258
Query: 162 NSLINLYMTCGLLSNARKLFDEIPV----TDVVTWNSMVIGYLRNGGLDNALDLFRKMNG 217
N+LI+ ++ G A KL D++ D+ T+NS++ G+ + LD A +F M
Sbjct: 259 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 318
Query: 218 KN----IISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDH 273
K+ + ++N++I G + ++ ELF EM + D +T +++ G D+
Sbjct: 319 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 378
Query: 274 GKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMIS 329
+ V + +G+ D++ + L++ G +++A E+F+ M + D +T MI
Sbjct: 379 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 438
Query: 330 VFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKR 384
G +D F + GVKPN VT+ ++S L+++ MK
Sbjct: 439 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 493
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 155/335 (46%), Gaps = 25/335 (7%)
Query: 57 LFSCSFSKYGSFTYATNVF-HMIN---NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYK 112
L SC YG ++ A+ + MI NP+L +N +I A+ V + F A L+
Sbjct: 226 LISC-LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF-----VKEGKFVEAEKLHD 279
Query: 113 KMLCDGIFPNCLTFPFLIKG-CTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTC 171
M+ I P+ T+ LI G C + ++ V K F D+ N+LI +
Sbjct: 280 DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF-PDLDTYNTLIKGFCKS 338
Query: 172 GLLSNARKLFDEIP----VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISW 223
+ + +LF E+ V D VT+ +++ G +G DNA +F++M +I+++
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 398
Query: 224 NSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRR 283
+ ++ GL G ++ALE+F MQ+ +K D +++ + G +D G + L
Sbjct: 399 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 458
Query: 284 NGIECDVVIGTALVNMYGKCGLVQQAFEIFEEM----PEKDTSAWTAMISVFALHGLGWK 339
G++ +VV +++ L+Q+A+ + ++M P D+ + +I G
Sbjct: 459 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 518
Query: 340 AFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQ 374
+ + EM R+ + +GL++ H G +++
Sbjct: 519 SAELIREM-RSCRFVGDASTIGLVANMLHDGRLDK 552
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 167/382 (43%), Gaps = 51/382 (13%)
Query: 102 RHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNG 161
+ A+ L +M+ G P+ +TF LI G + + ++V+ G ++
Sbjct: 94 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 162 NSLINLYMTCGLLSNARKLFDEIPVT----DVVTWNSMVIGYLRNGGLDNALDLFRKMNG 217
++N G + A L +++ DVV +N+++ + +D+AL+LF++M
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 218 K----NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDH 273
K N+++++S+I+ L G +A +L +M + + P+ +T +++ A + G
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 274 GKWVHSYLRRNGIECDVVIGTALVN---MYGKCGLVQQAF-------------------- 310
+ +H + + I+ D+ +L+N M+ + +Q F
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333
Query: 311 ------------EIFEEMPEK----DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKP 354
E+F EM + DT +T +I G A F +M GV P
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 355 NHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVIL 414
+ +T+ LL ++G +E+ FD M++ I+ +Y Y M++ + +A D+ L
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSE-IKLDIYIYTTMIEGMCKAGKVDDGWDL 452
Query: 415 IRSMPM---EPDVYVWGALLGG 433
S+ + +P+V + ++ G
Sbjct: 453 FCSLSLKGVKPNVVTYNTMISG 474
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 159/377 (42%), Gaps = 48/377 (12%)
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGA 140
P + +N ++ A A M + F + L +KM GI N T+ LI R +
Sbjct: 8 PSIFEFNKLLSAIAKM-----KKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS 62
Query: 141 SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYL 200
+ +++K G+ + +SL+N Y +S+A L D++ + +GY
Sbjct: 63 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM----------VEMGY- 111
Query: 201 RNGGLDNALDLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIAS 260
+ I++ ++I GL A EA+ L M Q +P+ +T
Sbjct: 112 ----------------RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155
Query: 261 VLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK- 319
V++ + G ID + + + IE DVVI +++ K V A +F+EM K
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 320 ---DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSG-LVEQG 375
+ ++++IS +G A +M + PN VTF L+ A G VE
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 376 RWCFDVMKRVYLIEPQVYHYA------CMVDLLSRARLFDESVILIRSMPMEPDVYVWGA 429
+ D++KR I+P ++ Y CM D L +A+ E ++ S PD+ +
Sbjct: 276 KLHDDMIKRS--IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV---SKDCFPDLDTYNT 330
Query: 430 LLGGCQMHGNVELGEKV 446
L+ G VE G ++
Sbjct: 331 LIKGFCKSKRVEDGTEL 347
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 131/288 (45%), Gaps = 20/288 (6%)
Query: 188 DVVTWNSMVIGYLRNGGLDNALDLFRKMNG----KNIISWNSIITGLVQGGLAKEALELF 243
++ T+N ++ + R + AL L KM +I++ +S++ G G +A+ L
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 103
Query: 244 HEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKC 303
+M ++ +PD IT +++ + + + G + ++V +VN K
Sbjct: 104 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 163
Query: 304 GLVQQAFEIFEEMP----EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
G + AF + +M E D + +I + A + F EME G++PN VT+
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 360 VGLLSA-CAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSM 418
L+S C++ + + D++++ I P + + ++D + F E+ L M
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKK--INPNLVTFNALIDAFVKEGKFVEAEKLHDDM 281
Query: 419 ---PMEPDVYVWGALLGGCQMHGNVELGEKVALHLI------DLEPHN 457
++PD++ + +L+ G MH ++ +++ ++ DL+ +N
Sbjct: 282 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYN 329
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 199/454 (43%), Gaps = 32/454 (7%)
Query: 60 CSFSKYGSFTYATNVFHMIN----NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKML 115
C +SK A ++F + PDL YN MI Y + F A +L K+M
Sbjct: 239 CDYSK------AISIFSRLKRSGITPDLVAYNSMINVYGKA-----KLFREARLLIKEMN 287
Query: 116 CDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLS 175
G+ PN +++ L+ V A++ + D+ N +I++Y ++
Sbjct: 288 EAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVK 347
Query: 176 NARKLFDEIPVTD----VVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSII 227
A +LF + D VV++N+++ Y A+ LFR M K N++++N++I
Sbjct: 348 EADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMI 407
Query: 228 TGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIE 287
+ ++A L EMQ ++P+ IT ++++S + G +D + LR +G+E
Sbjct: 408 KIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVE 467
Query: 288 CDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEM 347
D V+ ++ Y + GL+ A + E+ D I++ A G +A F +
Sbjct: 468 IDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQA 527
Query: 348 ERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRV-YLIEPQVYHYACMVDLLSRAR 406
+G + F +++ + + F+ M+ Y + V A +++ + R
Sbjct: 528 FESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNV--IAMVLNAYGKQR 585
Query: 407 LFDESVILIRSMPME----PDVYVWGALLGGCQMHGNVELGEKVALHL-IDLEPHNHAFY 461
F+++ + R M E PD V +L + E+ E + L D ++ +
Sbjct: 586 EFEKADTVYREMQEEGCVFPD-EVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELH 644
Query: 462 MNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPG 495
+ + +Y +A + + A R+ N ++ER + K PG
Sbjct: 645 LVVAALYERADKLNDASRVMNRMRERGILKPFPG 678
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 147/306 (48%), Gaps = 23/306 (7%)
Query: 189 VVTWNSMVIGYLRNGGLDNALDLFRKMNGKNI----ISWNSIITGLVQGGLAKEALELFH 244
V +N ++ LR D A LF +M + + +++++IT + G+ AL
Sbjct: 155 VFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQ 214
Query: 245 EMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCG 304
+M+Q V D + ++++ +L + S L+R+GI D+V +++N+YGK
Sbjct: 215 KMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAK 274
Query: 305 LVQQAFEIFEEMPE----KDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFV 360
L ++A + +EM E +T +++ ++SV+ + +A F EM+ + T
Sbjct: 275 LFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCN 334
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP- 419
++ +V++ F ++++ IEP V Y ++ + A LF E++ L R M
Sbjct: 335 IMIDVYGQLDMVKEADRLFWSLRKMD-IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQR 393
Query: 420 --MEPDVYVWGALLGGCQMHGNVELGEKVALHLID------LEPHNHAFYMNLCDIYGKA 471
+E +V + ++ +++G EK A +L+ +EP N Y + I+GKA
Sbjct: 394 KDIEQNVVTYNTMI---KIYGKTMEHEK-ATNLVQEMQSRGIEP-NAITYSTIISIWGKA 448
Query: 472 GRFDAA 477
G+ D A
Sbjct: 449 GKLDRA 454
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 197/462 (42%), Gaps = 69/462 (14%)
Query: 82 DLRVYNIMIRAYAGMDGVDDRHFCR------AMVLYKKMLCDGIFPNCLTFPFLIKGCTR 135
DL Y+I I FCR A+ + KM+ G P+ +T L+ G
Sbjct: 117 DLYTYSIFINC-----------FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCH 165
Query: 136 WMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPV----TDVVT 191
+ + Q+V+ G+ D F +LI+ S A L D++ D+VT
Sbjct: 166 SKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT 225
Query: 192 WNSMVIGYLRNGGLDNALDLFRKM-NGK---NIISWNSIITGLVQGGLAKEALELFHEMQ 247
+ ++V G + G +D AL L +KM GK +++ +N+II GL + +AL LF EM
Sbjct: 226 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMD 285
Query: 248 QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQ 307
++PD T +S++S G + S + I +VV +AL++ + K G +
Sbjct: 286 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 345
Query: 308 QAFEIFEEMPEK----DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLL 363
+A ++++EM ++ D ++++I+ F +H +A F M PN VT+ L+
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Query: 364 SACAHSGLVEQGRWCFDVMKRVYLI----------------------------------E 389
+ VE+G F M + L+
Sbjct: 406 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 465
Query: 390 PQVYHYACMVDLLSRARLFDESVIL---IRSMPMEPDVYVWGALLGGCQMHGNVELGEKV 446
P + Y ++D L + +++++ ++ MEPD+Y + ++ G G VE G ++
Sbjct: 466 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWEL 525
Query: 447 --ALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKE 486
L L + P N Y + + + G + A + +KE
Sbjct: 526 FCNLSLKGVSP-NVIAYNTMISGFCRKGSKEEADSLLKKMKE 566
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 160/367 (43%), Gaps = 35/367 (9%)
Query: 99 VDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDV 158
VDD A+ L+ M+ FP+ + F L+ + + Q+ G D+
Sbjct: 64 VDD-----AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDL 118
Query: 159 FNGNSLIN-------LYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDL 211
+ + IN L + +L+ KL E D+VT +S++ GY + + +A+ L
Sbjct: 119 YTYSIFINCFCRRSQLSLALAVLAKMMKLGYE---PDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 212 FRKM----NGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQ 267
+M + ++ ++I GL A EA+ L +M Q +PD +T +V++ +
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 268 LGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSA 323
G ID + + + IE DVVI +++ K + A +F EM K D
Sbjct: 236 RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFT 295
Query: 324 WTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSG-LVEQGRWCFDVM 382
++++IS +G A +M + PN VTF L+ A G LVE + +++
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 355
Query: 383 KRVYLIEPQVYHYA------CMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQM 436
KR I+P ++ Y+ CM D L A+ E +I S P+V + L+ G
Sbjct: 356 KRS--IDPDIFTYSSLINGFCMHDRLDEAKHMFELMI---SKDCFPNVVTYSTLIKGFCK 410
Query: 437 HGNVELG 443
VE G
Sbjct: 411 AKRVEEG 417
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 153/362 (42%), Gaps = 57/362 (15%)
Query: 64 KYGSFTYATNVFHMINN----PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGI 119
KY A N+F ++N PD+ Y+ +I D A L M+ I
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD-----ASRLLSDMIERKI 324
Query: 120 FPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARK 179
PN +TF LI + E ++ +++K D+F +SLIN + L A+
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384
Query: 180 LFDEIPVTD----VVTWNSMVIGYLRNGGLDNALDLFRKMNGK----------------- 218
+F+ + D VVT+++++ G+ + ++ ++LFR+M+ +
Sbjct: 385 MFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444
Query: 219 ----------------------NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKI 256
NI+++N ++ GL + G +A+ +F +Q+ +++PD
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 504
Query: 257 TIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEM 316
T ++ + G ++ G + L G+ +V+ +++ + + G ++A + ++M
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Query: 317 ----PEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLV 372
P ++ + +I G + + EM G + T +GL++ H G +
Sbjct: 565 KEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST-IGLVTNMLHDGRL 623
Query: 373 EQ 374
++
Sbjct: 624 DK 625
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 178/390 (45%), Gaps = 28/390 (7%)
Query: 63 SKYGSFTYATNVFHMIN----NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDG 118
+K ++ ++FH + DL YNI+I F A+ + KM+ G
Sbjct: 80 AKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS-----RFVIALSVVGKMMKFG 134
Query: 119 IFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNAR 178
P+ +T LI G + + +++ + GF DV N++I+ GL+++A
Sbjct: 135 YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 194
Query: 179 KLFDEIPV----TDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGL 230
+LFD + D VT+NS+V G +G +A L R M + N+I++ ++I
Sbjct: 195 ELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVF 254
Query: 231 VQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDV 290
V+ G EA++L+ EM + V PD T S+++ G +D K + + G DV
Sbjct: 255 VKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314
Query: 291 VIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFALHGLGWKAFDCFLE 346
V L+N + K V + ++F EM ++ DT + +I + G A + F
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 374
Query: 347 MERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRAR 406
M+ +PN T+ LL + VE+ F+ M++ IE + Y ++ + +
Sbjct: 375 MDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSE-IELDITTYNIVIHGMCKIG 430
Query: 407 LFDESVILIRSMP---MEPDVYVWGALLGG 433
+++ L RS+ ++PDV + ++ G
Sbjct: 431 NVEDAWDLFRSLSCKGLKPDVVSYTTMISG 460
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 145/331 (43%), Gaps = 34/331 (10%)
Query: 205 LDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIAS 260
L+ +DLF KM +I+ ++ +++ + + + LFH M+ + D +
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 261 VLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPE-- 318
V++ + V + + G E DVV ++L+N + + V A ++ +M E
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 319 --KDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGR 376
D + +I GL A + F MER GV+ + VT+ L+ +GL GR
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV-----AGLCCSGR 224
Query: 377 W--CFDVMKRVYL--IEPQVYHYACMVDLLSRARLFDESVILIRSMP---MEPDVYVWGA 429
W +M+ + + I P V + ++D+ + F E++ L M ++PDV+ + +
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 430 LLGGCQMHGNVELGEKVALHLIDLEPHNHAF-----YMNLCDIYGKAGRFDAAKRIRNLL 484
L+ G MHG V+ A ++DL Y L + + K+ R D + L
Sbjct: 285 LINGLCMHGRVD----EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTK---LF 337
Query: 485 KERRVQKKIPGCSMIEINGVVQEFSAGGSSE 515
+E Q+ + G I N ++Q + G +
Sbjct: 338 RE-MAQRGLVG-DTITYNTIIQGYFQAGRPD 366
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 107/234 (45%), Gaps = 14/234 (5%)
Query: 62 FSKYGSFTYATNVFHMIN----NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCD 117
F K G F+ A ++ + +PD+ YN +I VD+ A + M+
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE-----AKQMLDLMVTK 308
Query: 118 GIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNA 177
G P+ +T+ LI G + G + ++ + G + D N++I Y G A
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 368
Query: 178 RKLFDEIPV-TDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQ 232
+++F + ++ T++ ++ G N ++ AL LF M +I ++N +I G+ +
Sbjct: 369 QEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 233 GGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGI 286
G ++A +LF + +KPD ++ +++S + D ++ ++ +G+
Sbjct: 429 IGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 204/449 (45%), Gaps = 39/449 (8%)
Query: 62 FSKYGSFTYATNVFHMINN-----PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLC 116
+++ G + A VF+ N D+ YN+MI+AY G H +A+ L+K M
Sbjct: 489 YAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAY----GKAKLHE-KALSLFKGMKN 543
Query: 117 DGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSN 176
G +P+ T+ L + + + A+++ G ++I Y+ GLLS+
Sbjct: 544 QGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSD 603
Query: 177 ARKLFDEIPVTDV----VTWNSMVIGYLRNGGLDNALDLFRKMNGKNIISWNSIITGLVQ 232
A L++ + T V V + S++ G+ +G ++ A+ FR M + S + ++T L++
Sbjct: 604 AVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIK 663
Query: 233 G----GLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIEC 288
G +EA ++ +M+ PD S+LS CA LG + + + + LR G C
Sbjct: 664 AYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGT-C 722
Query: 289 DVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFALHGLGWKAFDCF 344
DV+ ++ +Y G++ +A E+ EEM E D +++ +++ +A G + + F
Sbjct: 723 DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELF 782
Query: 345 LEM--ERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLL 402
EM ER + + TF L + G+ + ++ Y + A L
Sbjct: 783 HEMLVERK-LLLDWGTFKTLFTLLKKGGVPSEA---VSQLQTAYNEAKPLATPAITATLF 838
Query: 403 SRARLFD---ESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLID--LEPH- 456
S L+ ES + S + + + + A++ G++++ K + + + LEP
Sbjct: 839 SAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDI 898
Query: 457 -NHAFYMNLCDIYGKAGRFDAAKRIRNLL 484
A+ L IYGKAG + KR+ + L
Sbjct: 899 VTQAY---LVGIYGKAGMVEGVKRVHSRL 924
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 161/381 (42%), Gaps = 62/381 (16%)
Query: 162 NSLINLYMTCGLLSNARKLFDE-----IPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMN 216
N+LI+LY G L++A LF E +P+ D VT+N+M+ +G L A L +KM
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPI-DTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 217 GKNII----SWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAID 272
K I ++N +++ G + ALE + +++++ + PD +T +VL Q +
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 273 HGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK---DTSAWTAMIS 329
+ V + + RN I D ++ MY GLV QA +FE ++ A+I
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVID 487
Query: 330 VFALHGLGW-------------------------------------KAFDCFLEMERAGV 352
V+A GL W KA F M+ G
Sbjct: 488 VYAEKGL-WVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGT 546
Query: 353 KPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESV 412
P+ T+ L A LV++ + M +P YA M+ R L ++V
Sbjct: 547 WPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSG-CKPGCKTYAAMIASYVRLGLLSDAV 605
Query: 413 ILIRSMP---MEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPH----NHAFYMNLC 465
L +M ++P+ V+G+L+ G G V E+ + +E H NH +L
Sbjct: 606 DLYEAMEKTGVKPNEVVYGSLINGFAESGMV---EEAIQYFRMMEEHGVQSNHIVLTSLI 662
Query: 466 DIYGKAGRFDAAKRIRNLLKE 486
Y K G + A+R+ + +K+
Sbjct: 663 KAYSKVGCLEEARRVYDKMKD 683
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 174/419 (41%), Gaps = 50/419 (11%)
Query: 80 NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIK-GCTRWMD 138
+PD + YNI++ +A ++ A+ Y+K+ G+FP+ +T ++ C R M
Sbjct: 372 SPDTKTYNILLSLHADAGDIE-----AALEYYRKIRKVGLFPDTVTHRAVLHILCQRKM- 425
Query: 139 GASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP---VTDVVTWNSM 195
A E V A++ + D + ++ +Y+ GL+ A+ LF+ V T ++
Sbjct: 426 VAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAV 485
Query: 196 VIGYLRNGGLDNALDLF---RKMNGK--NIISWNSIITGLVQGGLAKEALELFHEMQQIS 250
+ Y G A +F R M+G+ +++ +N +I + L ++AL LF M+
Sbjct: 486 IDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQG 545
Query: 251 VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAF 310
PD+ T S+ A + +D + + + + +G +
Sbjct: 546 TWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCK----------------------- 582
Query: 311 EIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSG 370
+ AMI+ + GL A D + ME+ GVKPN V + L++ A SG
Sbjct: 583 --------PGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESG 634
Query: 371 LVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME---PDVYVW 427
+VE+ F +M+ + ++ ++ S+ +E+ + M PDV
Sbjct: 635 MVEEAIQYFRMMEE-HGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAAS 693
Query: 428 GALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKE 486
++L C G V E + L + + + + +Y G D A + ++E
Sbjct: 694 NSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRE 752
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 113/274 (41%), Gaps = 18/274 (6%)
Query: 45 HSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINN----PDLRVYNIMIRAYAGMDGVD 100
H H++ L ++SK G A V+ + + PD+ N M+ A + G+
Sbjct: 649 HGVQSNHIVLTSLIK-AYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADL-GIV 706
Query: 101 DRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFN 160
L +K CD I + T +L KG + V ++ + G LSD +
Sbjct: 707 SEAESIFNALREKGTCDVI--SFATMMYLYKGMGMLDEAIE---VAEEMRESGLLSDCTS 761
Query: 161 GNSLINLYMTCGLLSNARKLFDEIPVTD--VVTWNSM--VIGYLRNGGLDNAL--DLFRK 214
N ++ Y G LS +LF E+ V ++ W + + L+ GG+ + L
Sbjct: 762 FNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTA 821
Query: 215 MNGKNIISWNSIITGLVQG-GLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDH 273
N ++ +I L GL ALE E+ + + +V+ + G ID
Sbjct: 822 YNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDM 881
Query: 274 GKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQ 307
+ ++ G+E D+V LV +YGK G+V+
Sbjct: 882 ALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVE 915
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 179/411 (43%), Gaps = 55/411 (13%)
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKG-CTRWMDG 139
P+ +Y +I + + + V++ A+ L ++M G P+ TF +I G C
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNE-----ALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304
Query: 140 ASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGY 199
+ ++V+ +++ GF D L+N G + A+ LF IP ++V +N+++ G+
Sbjct: 305 EAAKMVNRMLIR-GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGF 363
Query: 200 LRNGGLDNALDLFRKMNGK-----NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPD 254
+ +G LD+A + M ++ ++NS+I G + GL ALE+ H+M+ KP+
Sbjct: 364 VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN 423
Query: 255 KITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFE 314
+ ++ +LG ID V + + +G++ + V L++ + K + +A EIF
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 483
Query: 315 EMPEK---------------------------------------DTSAWTAMISVFALHG 335
EMP K +T + +I+ F G
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 336 LGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHY 395
+A EM G + +T+ L+ +G V++ R F+ M R P
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH-APSNISC 602
Query: 396 ACMVDLLSRARLFDESVILIRSMPME---PDVYVWGALLGGCQMHGNVELG 443
+++ L R+ + +E+V + M + PD+ + +L+ G G +E G
Sbjct: 603 NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 172/409 (42%), Gaps = 75/409 (18%)
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTR--WMD 138
PD +N +I D +++ A + +ML G P+ +T+ +L+ G + +D
Sbjct: 285 PDAETFNDVILGLCKFDRINE-----AAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVD 339
Query: 139 GASG---EIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP-----VTDVV 190
A I ++V F N+LI+ ++T G L +A+ + ++ V DV
Sbjct: 340 AAKDLFYRIPKPEIVIF---------NTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVC 390
Query: 191 TWNSMVIGYLRNGGLDNALDLFRKMNGK-------------------------------- 218
T+NS++ GY + G + AL++ M K
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450
Query: 219 -------NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAI 271
N + +N +I+ + EA+E+F EM + KPD T S++S ++ I
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510
Query: 272 DHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEM----PEKDTSAWTAM 327
H W+ + G+ + V L+N + + G +++A ++ EM D + ++
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
Query: 328 ISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYL 387
I G KA F +M R G P++++ L++ SG+VE+ + K + L
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA---VEFQKEMVL 627
Query: 388 --IEPQVYHYACMVDLLSRARLFDESVILIRSMPME---PDVYVWGALL 431
P + + +++ L RA ++ + + R + E PD + L+
Sbjct: 628 RGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 62/254 (24%)
Query: 62 FSKYGSFTYATNVFHMIN----NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCD 117
F K G A NV + ++ P+ +N +I A+ + A+ ++++M
Sbjct: 434 FCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC-----KEHRIPEAVEIFREMPRK 488
Query: 118 GIFPNCLTFPFLIKGCTRWMDGASGEIVHA-----QVVKFGFLSDVFNGNSLINLYMTCG 172
G P+ TF LI G EI HA ++ G +++ N+LIN ++ G
Sbjct: 489 GCKPDVYTFNSLISGLCE-----VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 173 LLSNARKLFDEIPVT----DVVTWNSMVIGYLRNGGLDNALDLFRKM------------- 215
+ ARKL +E+ D +T+NS++ G R G +D A LF KM
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603
Query: 216 ---NG-----------------------KNIISWNSIITGLVQGGLAKEALELFHEMQQI 249
NG +I+++NS+I GL + G ++ L +F ++Q
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 663
Query: 250 SVKPDKITIASVLS 263
+ PD +T +++S
Sbjct: 664 GIPPDTVTFNTLMS 677
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 121/280 (43%), Gaps = 34/280 (12%)
Query: 222 SWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYL 281
S+N ++ LV G K A +F++M + P T V+ A + ID + +
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 282 RRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEM------PEKDTSAWTAMISVFALHG 335
++G + VI L++ KC V +A ++ EEM P+ +T F
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET---------FNDVI 294
Query: 336 LGWKAFDCFLEMER-------AGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLI 388
LG FD E + G P+ +T+ L++ G V+ + D+ R+
Sbjct: 295 LGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK---DLFYRI--P 349
Query: 389 EPQVYHYACMV-DLLSRARLFDESVIL---IRSMPMEPDVYVWGALLGGCQMHGNVELGE 444
+P++ + ++ ++ RL D +L + S + PDV + +L+ G G V L
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 445 KVALHLID--LEPHNHAFYMNLCDIYGKAGRFDAAKRIRN 482
+V + + +P+ ++ Y L D + K G+ D A + N
Sbjct: 410 EVLHDMRNKGCKPNVYS-YTILVDGFCKLGKIDEAYNVLN 448
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 159/380 (41%), Gaps = 56/380 (14%)
Query: 76 HMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTR 135
+ + PD + +I + VDD A +Y+KML N + + LIK
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDD-----AYKVYEKMLDSDCRTNSIVYTSLIKNFFN 494
Query: 136 WMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTC----GLLSNARKLFDEIP----VT 187
G ++ ++ D+ L+N YM C G R +F+EI V
Sbjct: 495 HGRKEDGHKIYKDMINQNCSPDL----QLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP 550
Query: 188 DVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNII----SWNSIITGLVQGGLAKEALELF 243
D +++ ++ G ++ G + +LF M + + ++N +I G + G +A +L
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 244 HEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKC 303
EM+ +P +T SV+ A++ +D + + IE +VVI ++L++ +GK
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKV 670
Query: 304 GLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLL 363
G + +A+ I EE+ +K G+ PN T+ LL
Sbjct: 671 GRIDEAYLILEELMQK-------------------------------GLTPNLYTWNSLL 699
Query: 364 SACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP---M 420
A + + + CF MK + QV Y +++ L + R F+++ + + M M
Sbjct: 700 DALVKAEEINEALVCFQSMKELKCTPNQV-TYGILINGLCKVRKFNKAFVFWQEMQKQGM 758
Query: 421 EPDVYVWGALLGGCQMHGNV 440
+P + ++ G GN+
Sbjct: 759 KPSTISYTTMISGLAKAGNI 778
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 180/445 (40%), Gaps = 43/445 (9%)
Query: 61 SFSKYGSFTYATNVFHMIN----NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLC 116
SF K G A FH I PD Y MI + +D+ A+ +++ +
Sbjct: 247 SFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDE-----AVEMFEHLEK 301
Query: 117 DGIFPNCLTFPFLIKGCTRWMDGASGEIVHA------QVVKFGFLSDVFNGNSLINLYMT 170
+ P + +I G G++G+ A Q K G + V N ++
Sbjct: 302 NRRVPCTYAYNTMIMGY-----GSAGKFDEAYSLLERQRAK-GSIPSVIAYNCILTCLRK 355
Query: 171 CGLLSNARKLFDEI---PVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNG----KNIISW 223
G + A K+F+E+ ++ T+N ++ R G LD A +L M N+ +
Sbjct: 356 MGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTV 415
Query: 224 NSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRR 283
N ++ L + EA +F EM PD+IT S++ ++G +D V+ +
Sbjct: 416 NIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD 475
Query: 284 NGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFA----LHGLGWK 339
+ + ++ T+L+ + G + +I+++M ++ S +++ + G K
Sbjct: 476 SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEK 535
Query: 340 AFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMV 399
F E++ P+ ++ L+ +G + F MK + Y ++
Sbjct: 536 GRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCV-LDTRAYNIVI 594
Query: 400 DLLSRARLFDESVILIRSMP---MEPDVYVWGALLGGCQMHGNVE----LGEKVALHLID 452
D + +++ L+ M EP V +G+++ G ++ L E+ I+
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIE 654
Query: 453 LEPHNHAFYMNLCDIYGKAGRFDAA 477
L N Y +L D +GK GR D A
Sbjct: 655 L---NVVIYSSLIDGFGKVGRIDEA 676
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 137/336 (40%), Gaps = 43/336 (12%)
Query: 162 NSLINLYMTCGLLSNARKLFDEIPVT----DVVTWNSMVIGYLRNGGLDNALD---LFRK 214
NSL+ + C ++ E+ V V T MV+G ++ L D + RK
Sbjct: 102 NSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRK 161
Query: 215 MNGKNIIS-WNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDH 273
+ S + ++I + L LF +MQ++ +P +++ A+ G +D
Sbjct: 162 FKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDS 221
Query: 274 GKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFAL 333
+ ++ + ++ D+V+ ++ +GK G V A
Sbjct: 222 ALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA------------------------ 257
Query: 334 HGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVY 393
WK F E+E G+KP+ VT+ ++ + +++ F+ +++ + P Y
Sbjct: 258 ----WKFFH---EIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV-PCTY 309
Query: 394 HYACMVDLLSRARLFDESVILI---RSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHL 450
Y M+ A FDE+ L+ R+ P V + +L + G V+ KV +
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 451 IDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKE 486
N + Y L D+ +AG+ D A +R+ +++
Sbjct: 370 KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 106/244 (43%), Gaps = 17/244 (6%)
Query: 82 DLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTR--WMDG 139
D R YNI+I + V+ +A L ++M G P +T+ +I G + +D
Sbjct: 586 DTRAYNIVIDGFCKCGKVN-----KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDE 640
Query: 140 ASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP----VTDVVTWNSM 195
A A+ + +V +SLI+ + G + A + +E+ ++ TWNS+
Sbjct: 641 AYMLFEEAKSKRIEL--NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 698
Query: 196 VIGYLRNGGLDNALDLFRKMN----GKNIISWNSIITGLVQGGLAKEALELFHEMQQISV 251
+ ++ ++ AL F+ M N +++ +I GL + +A + EMQ+ +
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758
Query: 252 KPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFE 311
KP I+ +++S A+ G I + + NG D A++ AF
Sbjct: 759 KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFS 818
Query: 312 IFEE 315
+FEE
Sbjct: 819 LFEE 822
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 123/282 (43%), Gaps = 17/282 (6%)
Query: 237 KEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTAL 296
+EALE+ ++ D + + C ++ A++ + VH + D +
Sbjct: 94 REALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCI----TPLDARSYHTV 149
Query: 297 VNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNH 356
+ MY C A +F EMP++++ W MI A +G G +A D F G KP+
Sbjct: 150 IEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDK 209
Query: 357 VTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIR 416
F + AC G + +G F+ M R Y + + Y ++++L+ DE++ +
Sbjct: 210 EIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVE 269
Query: 417 SMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDA 476
M +EP V +W L+ C + G +ELG++ A + L+ + N + KA
Sbjct: 270 RMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESNAGLVAAKASDSAM 329
Query: 477 AKRIRNLLKERRVQKKIPGCSMI--EINGVVQEFSAGGSSEL 516
K LKE R C MI + + EF AG +S L
Sbjct: 330 EK-----LKELRY------CQMIRDDPKKRMHEFRAGDTSHL 360
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 5/177 (2%)
Query: 164 LINLYMTCG---LLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNI 220
L+ L CG L AR + D I D ++++++ Y D+AL++F +M +N
Sbjct: 115 LLGLAKLCGEVEALEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNS 174
Query: 221 ISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKW-VHS 279
+W ++I L + G + A+++F + KPDK +V AC +G I+ G S
Sbjct: 175 ETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFES 234
Query: 280 YLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMP-EKDTSAWTAMISVFALHG 335
R G+ + ++ M CG + +A + E M E W ++++ + G
Sbjct: 235 MYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQG 291
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 158/350 (45%), Gaps = 19/350 (5%)
Query: 49 QYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAM 108
Q +L+T + K G A N+ + + + N++I + RH A+
Sbjct: 222 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA-NVVIYSTVIDSLCKYRHEDDAL 280
Query: 109 VLYKKMLCDGIFPNCLTFPFLIK---GCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLI 165
L+ +M G+ PN +T+ LI RW D + + + +++ +V N+LI
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASR---LLSDMIERKINPNVVTFNALI 337
Query: 166 NLYMTCGLLSNARKLFDEIPV----TDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK--- 218
+ ++ G L A KL+DE+ D+ T++S++ G+ + LD A +F M K
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 219 -NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWV 277
N++++N++I G + E +ELF EM Q + + +T +++ Q D+ + V
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 278 HSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMP----EKDTSAWTAMISVFAL 333
+ +G+ +++ L++ K G +++A +FE + E + MI
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 334 HGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMK 383
G +D F + GVKP+ + + ++S GL E+ F M+
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 166/350 (47%), Gaps = 32/350 (9%)
Query: 107 AMVLYKKMLCDGIFPNCLTFPFLIKG-CTRW-MDGASGEIVHAQVVKFGFLSDVFNGNSL 164
A+ L +M+ G PN +T+ ++ G C R +D A + + K ++V +++
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE--ANVVIYSTV 266
Query: 165 INLYMTCGLLSNARKLFDEIP----VTDVVTWNSMV---IGYLRNGGLDNAL-DLFRKMN 216
I+ +A LF E+ +V+T++S++ Y R L D+ +
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 217 GKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKW 276
N++++N++I V+ G EA +L+ EM + S+ PD T +S+++ +D K
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 277 VHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFA 332
+ + +VV L+N + K + + E+F EM ++ +T +T +I
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI---- 442
Query: 333 LHGLGWKAFDC------FLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVY 386
HG ++A DC F +M GV PN +T+ LL +G +E+ F+ ++R
Sbjct: 443 -HGF-FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 387 LIEPQVYHYACMVDLLSRARLFDESVILIRSMPM---EPDVYVWGALLGG 433
+ EP +Y Y M++ + +A ++ L S+ + +PDV ++ ++ G
Sbjct: 501 M-EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISG 549
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 177/411 (43%), Gaps = 56/411 (13%)
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGA 140
P + +N ++ A A M + F + L +KM GI N T+ LI R +
Sbjct: 83 PSIFEFNKLLSAIAKM-----KKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS 137
Query: 141 SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEI------PVT------- 187
+ +++K G+ + +SL+N Y +S+A L D++ P T
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 188 --------------------------DVVTWNSMVIGYLRNGGLDNALDLFRKMNG---- 217
++VT+ +V G + G +D A +L KM
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 257
Query: 218 KNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWV 277
N++ ++++I L + +AL LF EM+ V+P+ IT +S++S +
Sbjct: 258 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRL 317
Query: 278 HSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFAL 333
S + I +VV AL++ + K G + +A ++++EM ++ D ++++I+ F +
Sbjct: 318 LSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 377
Query: 334 HGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVY 393
H +A F M PN VT+ L++ + +++G F M + L+ V
Sbjct: 378 HDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV- 436
Query: 394 HYACMVDLLSRARLFDESVILIRSM---PMEPDVYVWGALLGGCQMHGNVE 441
Y ++ +AR D + ++ + M + P++ + LL G +G +E
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 144/321 (44%), Gaps = 31/321 (9%)
Query: 188 DVVTWNSMVIGYLRNGGLDNALDLFRKMNG----KNIISWNSIITGLVQGGLAKEALELF 243
++ T+N ++ + R + AL L KM +I++ +S++ G G +A+ L
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 244 HEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKC 303
+M ++ +PD IT +++ + + + G + ++V +VN K
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 304 GLVQQAFEIFEEMP----EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
G + AF + +M E + ++ +I + A + F EME GV+PN +T+
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 360 VGLLSA-CAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVD-------LLSRARLFDES 411
L+S C + + R D+++R I P V + ++D L+ +L+DE
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERK--INPNVVTFNALIDAFVKEGKLVEAEKLYDE- 355
Query: 412 VILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAF-----YMNLCD 466
++ RS+ +PD++ + +L+ G MH ++ A H+ +L F Y L +
Sbjct: 356 -MIKRSI--DPDIFTYSSLINGFCMHDRLD----EAKHMFELMISKDCFPNVVTYNTLIN 408
Query: 467 IYGKAGRFDAAKRIRNLLKER 487
+ KA R D + + +R
Sbjct: 409 GFCKAKRIDEGVELFREMSQR 429
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 113/238 (47%), Gaps = 19/238 (7%)
Query: 61 SFSKYGSFTYATNVF-HMIN---NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLC 116
+F K G A ++ MI +PD+ Y+ +I + D +D+ A +++ M+
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE-----AKHMFELMIS 393
Query: 117 DGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSN 176
FPN +T+ LI G + G + ++ + G + + +LI+ + N
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 453
Query: 177 ARKLFDEIPVTD-----VVTWNSMVIGYLRNGGLDNALDLF----RKMNGKNIISWNSII 227
A+ +F ++ V+D ++T+N+++ G +NG L+ A+ +F R I ++N +I
Sbjct: 454 AQMVFKQM-VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 512
Query: 228 TGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNG 285
G+ + G ++ +LF + VKPD I +++S + G + + +R +G
Sbjct: 513 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 94/185 (50%), Gaps = 13/185 (7%)
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGA 140
P++ YN +I + +D+ + L+++M G+ N +T+ LI G + D
Sbjct: 398 PNVVTYNTLINGFCKAKRIDE-----GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 452
Query: 141 SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTD----VVTWNSMV 196
+ ++V Q+V G ++ N+L++ G L A +F+ + + + T+N M+
Sbjct: 453 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 512
Query: 197 IGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQISVK 252
G + G +++ DLF ++ K ++I +N++I+G + GL +EA LF +M++
Sbjct: 513 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPL 572
Query: 253 PDKIT 257
PD T
Sbjct: 573 PDSGT 577
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 143/322 (44%), Gaps = 22/322 (6%)
Query: 200 LRNG----GLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQISV 251
LRNG LD+A+ LF M +I +N +++ + + + L +MQ++ +
Sbjct: 57 LRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI 116
Query: 252 KPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFE 311
+ T +++ + I + + + G E +V ++L+N Y + A
Sbjct: 117 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 312 IFEEMPE----KDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACA 367
+ ++M E DT +T +I LH +A M + G +PN VT+ +++
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 368 HSGLVEQGRWCFDVMKRVYL--IEPQVYHYACMVDLLSRARLFDESVILIRSMP---MEP 422
G ++ F+++ ++ IE V Y+ ++D L + R D+++ L M + P
Sbjct: 237 KRGDID---LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293
Query: 423 DVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAFYMN-LCDIYGKAGRFDAAKRIR 481
+V + +L+ + ++ +I+ + + + N L D + K G+ A+++
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 482 NLLKERRVQKKIPGCSMIEING 503
+ + +R + I S + ING
Sbjct: 354 DEMIKRSIDPDIFTYSSL-ING 374
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 170/370 (45%), Gaps = 25/370 (6%)
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGA 140
P +R YN ++ A+ V+ + + + L+ G+ PN T+ LIK + +
Sbjct: 112 PAIRSYNTLLNAF-----VEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFE 166
Query: 141 SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP----VTDVVTWNSMV 196
+ K GF DVF+ +++IN G L +A +LFDE+ DV +N ++
Sbjct: 167 KARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILI 226
Query: 197 IGYLRNGGLDNALDLFRKMNGK-----NIISWNSIITGLVQGGLAKEALELFHEMQQISV 251
G+L+ A++L+ ++ N+ + N +I+GL + G + L+++ M+Q
Sbjct: 227 DGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNER 286
Query: 252 KPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFE 311
+ D T +S++ G +D + V + L DVV ++ + +CG ++++ E
Sbjct: 287 EKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLE 346
Query: 312 IFEEMPEKDT---SAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAH 368
++ M K++ ++ +I +G +A + M G + T+ +
Sbjct: 347 LWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCV 406
Query: 369 SGLVEQGRWCFDVMKRVYLI--EPQVYHYACMVDLLSRARLFDESVILIRSMP---MEPD 423
+G V + VM+ V VY YA ++D L + + +E+ L++ M +E +
Sbjct: 407 NGYVNKA---LGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELN 463
Query: 424 VYVWGALLGG 433
+V AL+GG
Sbjct: 464 SHVCNALIGG 473
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 103/247 (41%), Gaps = 19/247 (7%)
Query: 261 VLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMP--- 317
+L ++ ++H + +R +CD + +++ YGK + QA ++F+ M
Sbjct: 49 ILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIF 108
Query: 318 --EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQG 375
E ++ +++ F K F E AGV PN T+ L+ E+
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 376 RWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP---MEPDVYVWGALLG 432
R D M + +P V+ Y+ +++ L++A D+++ L M + PDV + L+
Sbjct: 169 RGFLDWMWKEGF-KPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILID 227
Query: 433 GCQMHGNVELGEKVALHLIDLEPHNHAFYMN------LCDIYGKAGRFDAAKRIRNLLKE 486
G E K A+ L D + + Y N + K GR D +I +K+
Sbjct: 228 GFLK----EKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQ 283
Query: 487 RRVQKKI 493
+K +
Sbjct: 284 NEREKDL 290
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 144/336 (42%), Gaps = 24/336 (7%)
Query: 79 NNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKG-CTR-W 136
N+ ++ YNI+I+ +D+ A ++++ M G + T+ I G C +
Sbjct: 355 NSVNIVSYNILIKGLLENGKIDE-----ATMIWRLMPAKGYAADKTTYGIFIHGLCVNGY 409
Query: 137 MDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVV----TW 192
++ A G V +V G DV+ S+I+ L A L E+ V
Sbjct: 410 VNKALG--VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC 467
Query: 193 NSMVIGYLRNGGLDNALDLFRKMNGKN-----IISWNSIITGLVQGGLAKEALELFHEMQ 247
N+++ G +R+ L A R+M GKN ++S+N +I GL + G EA EM
Sbjct: 468 NALIGGLIRDSRLGEASFFLREM-GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEML 526
Query: 248 QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQ 307
+ KPD T + +L + ID + ++G+E DV++ L++ G +
Sbjct: 527 ENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLD 586
Query: 308 QAFEIFEEMPEKDTSA----WTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLL 363
A + M ++ +A + ++ F G +A + M + G++P+ +++ ++
Sbjct: 587 DAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIM 646
Query: 364 SACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMV 399
V FD R + I P VY + +V
Sbjct: 647 KGLCMCRGVSYAMEFFDD-ARNHGIFPTVYTWNILV 681
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 183/416 (43%), Gaps = 34/416 (8%)
Query: 63 SKYGSFTYATNVFHMIN-------NPDLRVYNIMIRAYAGMDGVDDRH--FCRAMVLYKK 113
S Y S F ++N +P + YN +I +H + RA ++ +
Sbjct: 278 SAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC-------KHGKYERAKEVFAE 330
Query: 114 MLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGL 173
ML G+ P+ T+ L+ + D E V + + + D+ +S+++L+ G
Sbjct: 331 MLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGN 390
Query: 174 LSNARKLFDEIP----VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISWNS 225
L A F+ + + D V + ++ GY R G + A++L +M + +++++N+
Sbjct: 391 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 226 IITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNG 285
I+ GL + + EA +LF+EM + ++ PD T+ ++ +LG + + + ++
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR 510
Query: 286 IECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKD----TSAWTAMISVFALHGLGWKAF 341
I DVV L++ +GK G + A EI+ +M K+ +++ +++ G +AF
Sbjct: 511 IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAF 570
Query: 342 DCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDL 401
+ EM +KP + ++ SG G + M + P Y ++
Sbjct: 571 RVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV-PDCISYNTLIYG 629
Query: 402 LSRARLFDESVILIRSMPME-----PDVYVWGALLGGCQMHGNVELGEKVALHLID 452
R ++ L++ M E PDV+ + ++L G ++ E V +I+
Sbjct: 630 FVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIE 685
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/437 (20%), Positives = 190/437 (43%), Gaps = 31/437 (7%)
Query: 85 VYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEI 144
V++++IR Y + + H ++ K N L + G W++ A G
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIG---WVELAWG-- 221
Query: 145 VHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP----VTDVVTWNSMVIGYL 200
V+ ++ + G +V+ N ++N G + ++ D+VT+N+++ Y
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 201 RNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKI 256
G ++ A +L M GK + ++N++I GL + G + A E+F EM + + PD
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 257 TIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEM 316
T S+L + G + + V S +R + D+V +++++++ + G + +A F +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 317 PE----KDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLV 372
E D +T +I + G+ A + EM + G + VT+ +L ++
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 373 EQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP---MEPDVYVWGA 429
+ F+ M L P Y ++D + ++ L + M + DV +
Sbjct: 462 GEADKLFNEMTERALF-PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 430 LLGGCQMHGNVELGEKVALHLIDLE----PHNHAFYMN-LCDIYGKAGRFDAAKRIRNLL 484
LL G G+++ +++ ++ E P +++ +N LC G A R+ + +
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS----KGHLAEAFRVWDEM 576
Query: 485 KERRVQKKIPGC-SMIE 500
+ ++ + C SMI+
Sbjct: 577 ISKNIKPTVMICNSMIK 593
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 114/252 (45%), Gaps = 15/252 (5%)
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGA 140
PD I+I + + + + AM L++KM I + +T+ L+ G + D
Sbjct: 478 PDSYTLTILIDGHCKLGNLQN-----AMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 141 SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTD----VVTWNSMV 196
+ + + A +V L + + L+N + G L+ A +++DE+ + V+ NSM+
Sbjct: 533 TAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592
Query: 197 IGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQ--QIS 250
GY R+G + KM + + IS+N++I G V+ +A L +M+ Q
Sbjct: 593 KGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGG 652
Query: 251 VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAF 310
+ PD T S+L + + + V + G+ D T ++N + + +AF
Sbjct: 653 LVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAF 712
Query: 311 EIFEEMPEKDTS 322
I +EM ++ S
Sbjct: 713 RIHDEMLQRGFS 724
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 106/262 (40%), Gaps = 28/262 (10%)
Query: 51 HLITRLLFSCSFS---------KYGSFTYATNVFHMINNPDLRV----YNIMIRAYAGMD 97
+ R LF S++ K G+ A +F + +R+ YN ++ + +
Sbjct: 470 EMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVG 529
Query: 98 GVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSD 157
+D A ++ M+ I P +++ L+ A V +++
Sbjct: 530 DIDT-----AKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT 584
Query: 158 VFNGNSLINLYMTCGLLSNAR----KLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFR 213
V NS+I Y G S+ K+ E V D +++N+++ G++R + A L +
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVK 644
Query: 214 KMNGK------NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQ 267
KM + ++ ++NSI+ G + KEA + +M + V PD+ T +++
Sbjct: 645 KMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVS 704
Query: 268 LGAIDHGKWVHSYLRRNGIECD 289
+ +H + + G D
Sbjct: 705 QDNLTEAFRIHDEMLQRGFSPD 726
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 119/505 (23%), Positives = 201/505 (39%), Gaps = 94/505 (18%)
Query: 62 FSKYGSFTYATNVFHMINN----PDLRVYNIMIRAY--AGMDGVDDRHFCRAM------- 108
F K G A ++F ++ PDL Y+ +I Y AGM G+ + F +A+
Sbjct: 296 FCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355
Query: 109 ---------------------VLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEI--V 145
V+YK+MLC GI PN +T+ LIKG + DG E +
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ--DGRIYEAFGM 413
Query: 146 HAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEI-----PVTDVVTWNSMVIGYL 200
+ Q++K G + +SLI+ + CG L + L++++ P DVV + +V G
Sbjct: 414 YGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP-PDVVIYGVLVDGLS 472
Query: 201 RNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKI 256
+ G + +A+ KM G+ N++ +NS+I G + EAL++F M +KPD
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 257 TIASVLSACAQLGAIDH-----------------------------------GKWVHSYL 281
T +V+ G ++ G + +
Sbjct: 533 TFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM 592
Query: 282 RRNGIECDVVIGTALVNMYGKCGLVQQAFEIF----EEMPEKDTSAWTAMISVFALHGLG 337
+RN I D+ + ++++ KC ++ A + F E E D + MI +
Sbjct: 593 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 652
Query: 338 WKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYAC 397
+A F ++ PN VT L+ + ++ F +M +P Y C
Sbjct: 653 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG-SKPNAVTYGC 711
Query: 398 MVDLLSRARLFDESVILIRSMP---MEPDVYVWGALLGGCQMHGNVELGEKVALHLID-- 452
++D S++ + S L M + P + + ++ G G V+ + ID
Sbjct: 712 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 771
Query: 453 LEPHNHAFYMNLCDIYGKAGRFDAA 477
L P A Y L Y K GR A
Sbjct: 772 LLPDVVA-YAILIRGYCKVGRLVEA 795
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 196/456 (42%), Gaps = 41/456 (8%)
Query: 68 FTYATNVFHMINNPDLRVYNIMIRAYAGMDGVD--DRHF---CRAMVLYKKMLCDGIFPN 122
F Y+T + +I P VY M+ + G D VD HF CR + + G +
Sbjct: 169 FVYSTQLGVVI--PQDSVYR-MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLD 225
Query: 123 CLTFPFLIKGCTRWMDGASGEIVHAQVVKFGF------LSDVFNGNSLINLYMTCGLLSN 176
L F T+ +D H V++ GF + V G S+ + + LLS
Sbjct: 226 AL---FCKGEVTKALD------FHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLS- 275
Query: 177 ARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNI----ISWNSIITGLVQ 232
+ D P +VVT+ +++ G+ + G +D A DLF+ M + I I+++++I G +
Sbjct: 276 --LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFK 333
Query: 233 GGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVI 292
G+ +LF + VK D + +S + + G + V+ + GI +VV
Sbjct: 334 AGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVT 393
Query: 293 GTALVNMYGKCGLVQQAF----EIFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEME 348
T L+ + G + +AF +I + E ++++I F G F + +M
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 349 RAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLF 408
+ G P+ V + L+ + GL+ F V I V + ++D R F
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMR-FSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 409 DESVILIRSM---PMEPDVYVWGALLGGCQMHGNVELGEKVALHL--IDLEPHNHAFYMN 463
DE++ + R M ++PDV + ++ M G +E + + + LEP A Y
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALA-YCT 571
Query: 464 LCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMI 499
L D + K + ++ +L++ ++ I C+++
Sbjct: 572 LIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVV 607
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 140/329 (42%), Gaps = 21/329 (6%)
Query: 68 FTYATNVFHMIN----NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNC 123
F A VF ++ PD+ + ++R + M+G A+ L+ +M G+ P+
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRV-SIMEG----RLEEALFLFFRMFKMGLEPDA 566
Query: 124 LTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDE 183
L + LI + M G + + + +D+ N +I+L C + +A K F+
Sbjct: 567 LAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 626
Query: 184 I----PVTDVVTWNSMVIGYLRNGGLDNALDLFRKMN----GKNIISWNSIITGLVQGGL 235
+ D+VT+N+M+ GY LD A +F + G N ++ +I L +
Sbjct: 627 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 686
Query: 236 AKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTA 295
A+ +F M + KP+ +T ++ ++ I+ + ++ GI +V +
Sbjct: 687 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 746
Query: 296 LVNMYGKCGLVQQAFEIFEEMPE----KDTSAWTAMISVFALHGLGWKAFDCFLEMERAG 351
+++ K G V +A IF + + D A+ +I + G +A + M R G
Sbjct: 747 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 806
Query: 352 VKPNHVTFVGLLSACAHSGLVEQGRWCFD 380
VKP+ + L L+ +G W D
Sbjct: 807 VKPDDLLQRALSEYNPPKWLMSKGVWVHD 835
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 118/280 (42%), Gaps = 47/280 (16%)
Query: 25 CKNLRELKRIHTQILTSPNLHSSDQY--HLITRLLFSCSFSKYGSFTYATNVFHMINNPD 82
CK+++ + L N S+D +++ LLF C + S + N+ PD
Sbjct: 577 CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS-KFFNNLIEGKMEPD 635
Query: 83 LRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRW--MDGA 140
+ YN MI Y + +D+ A +++ + PN +T LI + MDGA
Sbjct: 636 IVTYNTMICGYCSLRRLDE-----AERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA 690
Query: 141 SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYL 200
+ F +++ G NA VT+ ++ +
Sbjct: 691 --------IRMFSIMAEK-------------GSKPNA------------VTYGCLMDWFS 717
Query: 201 RNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKI 256
++ ++ + LF +M K +I+S++ II GL + G EA +FH+ + PD +
Sbjct: 718 KSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVV 777
Query: 257 TIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTAL 296
A ++ ++G + ++ ++ RNG++ D ++ AL
Sbjct: 778 AYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 179/396 (45%), Gaps = 38/396 (9%)
Query: 68 FTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFP 127
F + N+ + N PD+ +IR + + +A + + + G P+ +T+
Sbjct: 122 FKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTR-----KAAKILEILEGSGAVPDVITYN 176
Query: 128 FLIKGCTRWMDGASGEIVHAQVV--KFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEI- 184
+I G + +GEI +A V + DV N+++ G L A ++ D +
Sbjct: 177 VMISGYCK-----AGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 185 ---PVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAK 237
DV+T+ ++ R+ G+ +A+ L +M + +++++N ++ G+ + G
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 238 EALELFHEMQQISVKPDKITIASVL-SACAQLGAIDHGKWVHSYLRRNGIECDVVIGTAL 296
EA++ ++M +P+ IT +L S C+ +D K + LR+ G VV L
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK-GFSPSVVTFNIL 350
Query: 297 VNMYGKCGLVQQAFEIFEEMPE----KDTSAWTAMISVFALHGLGWKAFDCFLEMERAGV 352
+N + GL+ +A +I E+MP+ ++ ++ ++ F +A + M G
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 353 KPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRA------- 405
P+ VT+ +L+A G VE + + P + Y ++D L++A
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG-CSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 406 RLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVE 441
+L DE +R+ ++PD + +L+GG G V+
Sbjct: 470 KLLDE----MRAKDLKPDTITYSSLVGGLSREGKVD 501
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 177/419 (42%), Gaps = 30/419 (7%)
Query: 52 LITRLLFSCSFSKYGSFTYATNVF-HMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVL 110
+IT + + K G A +V M +PD+ YN ++R+ D +AM +
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLC-----DSGKLKQAMEV 226
Query: 111 YKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVH--AQVVKFGFLSDVFNGNSLINLY 168
+ML +P+ +T+ LI+ R D G + ++ G DV N L+N
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCR--DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 169 MTCGLLSNARKLFDEIPVT----DVVTWNSMVIGYLRNGGLDNA----LDLFRKMNGKNI 220
G L A K +++P + +V+T N ++ G +A D+ RK ++
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 221 ISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSY 280
+++N +I L + GL A+++ +M Q +P+ ++ +L + +D
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 281 LRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTS----AWTAMISVFALHGL 336
+ G D+V ++ K G V+ A EI ++ K S + +I A G
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 337 GWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYA 396
KA EM +KP+ +T+ L+ + G V++ F +R+ I P +
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG-IRPNAVTFN 523
Query: 397 CMVDLLSRARLFDESV---ILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLID 452
++ L ++R D ++ + + + +P+ + L+ G G K AL L++
Sbjct: 524 SIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMA----KEALELLN 578
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 145/325 (44%), Gaps = 64/325 (19%)
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKG-CT--RWM 137
PD+ YN+++ +D+ A+ M G PN +T +++ C+ RWM
Sbjct: 272 PDVVTYNVLVNGICKEGRLDE-----AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 138 DGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP------------ 185
D E + A +++ GF V N LIN GLL A + +++P
Sbjct: 327 DA---EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383
Query: 186 ---------------------------VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK 218
D+VT+N+M+ ++G +++A+++ +++ K
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Query: 219 N----IISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHG 274
+I++N++I GL + G +A++L EM+ +KPD IT +S++ ++ G +D
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 275 -KWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQ--QAFEIFEEMPEK----DTSAWTAM 327
K+ H + R GI + V ++ M G C Q +A + M + + +++T +
Sbjct: 504 IKFFHEF-ERMGIRPNAVTFNSI--MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560
Query: 328 ISVFALHGLGWKAFDCFLEMERAGV 352
I A G+ +A + E+ G+
Sbjct: 561 IEGLAYEGMAKEALELLNELCNKGL 585
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 175/400 (43%), Gaps = 26/400 (6%)
Query: 76 HMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTF-PFLIKGCT 134
M + PDL N ++ + G + AM+L KM+ G PN +T+ P L C
Sbjct: 186 EMGHKPDLITINTLVNGLC-LSGKE----AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCK 240
Query: 135 RWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPV----TDVV 190
+ E++ ++ + D + +I+ G L NA LF+E+ + T+++
Sbjct: 241 SGQTALAMELLR-KMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 191 TWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEM 246
T+N ++ G+ G D+ L R M + N+++++ +I V+ G +EA EL EM
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 247 QQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLV 306
+ PD IT S++ + +D + + G + ++ L+N Y K +
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 419
Query: 307 QQAFEIFEEMPEK----DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGL 362
E+F +M + DT + +I F G A + F EM V PN VT+ L
Sbjct: 420 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKIL 479
Query: 363 LSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM-- 420
L +G E+ F+ +++ + E + Y ++ + A D++ L S+P+
Sbjct: 480 LDGLCDNGESEKALEIFEKIEKSKM-ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 421 -EPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHA 459
+P V + ++GG G + E L +E HA
Sbjct: 539 VKPGVKTYNIMIGGLCKKGPLSEAE---LLFRKMEEDGHA 575
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 123/267 (46%), Gaps = 13/267 (4%)
Query: 219 NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVH 278
N I+++++I GL G EALEL M ++ KPD ITI ++++ G +
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 279 SYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFALH 334
+ G + + V ++N+ K G A E+ +M E+ D ++ +I H
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276
Query: 335 GLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQG-RWCFDVMKRVYLIEPQVY 393
G AF+ F EME G+ N +T+ L+ ++G + G + D++KR I P V
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK--INPNVV 334
Query: 394 HYACMVDLLSRARLFDESVILIRSM---PMEPDVYVWGALLGGCQMHGNVELGEKVALHL 450
++ ++D + E+ L + M + PD + +L+ G +++ ++ +
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 451 ID--LEPHNHAFYMNLCDIYGKAGRFD 475
+ +P+ F + L + Y KA R D
Sbjct: 395 VSKGCDPNIRTFNI-LINGYCKANRID 420
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 137/293 (46%), Gaps = 19/293 (6%)
Query: 80 NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKG-CTRWMD 138
NP++ ++++I ++ V + A L+K+M+ GI P+ +T+ LI G C
Sbjct: 330 NPNVVTFSVLIDSF-----VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384
Query: 139 GASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP----VTDVVTWNS 194
+ ++V V K G ++ N LIN Y + + +LF ++ V D VT+N+
Sbjct: 385 DKANQMVDLMVSK-GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 195 MVIGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQIS 250
++ G+ G L+ A +LF++M + NI+++ ++ GL G +++ALE+F ++++
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 251 VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAF 310
++ D ++ +D + L G++ V ++ K G + +A
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 311 EIFEEMPEKD--TSAWTAMISVFALHGLG--WKAFDCFLEMERAGVKPNHVTF 359
+F +M E WT I + A G G K+ E++R G + T
Sbjct: 564 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTI 616
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 170/421 (40%), Gaps = 51/421 (12%)
Query: 80 NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDG 139
P R Y ++I+A +D +A L+ +M+ G PN T+ LI G R
Sbjct: 298 QPSTRTYTVLIKALCDRGLID-----KAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKI 352
Query: 140 ASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPV----TDVVTWNSM 195
V ++VK V N+LIN Y G + A +L + +V T+N +
Sbjct: 353 EEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 196 VIGYLRNGGLDNALDLFRKM--NG--KNIISWNSIITGLVQGGLAKEALELFHEMQQISV 251
+ G R G A+ L ++M NG +I+S+N +I GL + G A +L M +
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 252 KPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFE 311
+PD +T ++++A + G D + R GI D V GT L++ K G + A
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 312 IFEEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGL 371
I E + M + H L + L+M G K + +L GL
Sbjct: 533 ILETL--------VKMRILTTPHSL-----NVILDMLSKGCKVKEE--LAMLGKINKLGL 577
Query: 372 VEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME---PDVYVWG 428
V P V Y +VD L R+ S ++ M + P+VY +
Sbjct: 578 V-----------------PSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYT 620
Query: 429 ALLGGCQMHGNVELGEKVALHLID--LEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKE 486
++ G G VE EK+ + D + P NH Y + Y G+ D A + E
Sbjct: 621 IIINGLCQFGRVEEAEKLLSAMQDSGVSP-NHVTYTVMVKGYVNNGKLDRALETVRAMVE 679
Query: 487 R 487
R
Sbjct: 680 R 680
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 129/307 (42%), Gaps = 14/307 (4%)
Query: 107 AMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLIN 166
A V Y++M DG + + ++ + + E+ ++++K GF+ D G SL+
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 167 LYMTCGLLSNARKLFDEIP-----VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK--- 218
+ L +A K+FD + + V+++ ++ G G L+ A L +M K
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298
Query: 219 -NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWV 277
+ ++ +I L GL +A LF EM KP+ T ++ + G I+ V
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 278 HSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFAL 333
+ ++ I V+ AL+N Y K G V AFE+ M ++ + + ++
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 334 HGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVY 393
G +KA M G+ P+ V++ L+ G + M + IEP
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN-CFDIEPDCL 477
Query: 394 HYACMVD 400
+ +++
Sbjct: 478 TFTAIIN 484
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 102/230 (44%), Gaps = 9/230 (3%)
Query: 219 NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVH 278
N ++S++ L + L A + M+ I ++++A + G + +
Sbjct: 159 NYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM 218
Query: 279 SYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLG- 337
S + + G D IGT+L+ + + ++ A ++F+ M ++ T A ++ +HGL
Sbjct: 219 SKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCE 278
Query: 338 ----WKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVY 393
+AF +M G +P+ T+ L+ A GL+++ FD M +P V+
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIP-RGCKPNVH 337
Query: 394 HYACMVDLLSRARLFDESVILIRSMPME---PDVYVWGALLGGCQMHGNV 440
Y ++D L R +E+ + R M + P V + AL+ G G V
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRV 387
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 168/393 (42%), Gaps = 65/393 (16%)
Query: 117 DGIFPNCLTFPFLIKGCTRWMDGASGEIVHA-----QVVKFGFLSDVFNGNSLINLYMTC 171
DG FP+ TF L+ G + +G + HA +++ G+ DV+ NS+I+
Sbjct: 289 DGFFPDQYTFNTLVNGLCK-----AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 343
Query: 172 GLLSNARKLFDEIPVTD----VVTWNSMVIGYLRNGGLDNALDLFRKMNGKNII----SW 223
G + A ++ D++ D VT+N+++ + ++ A +L R + K I+ ++
Sbjct: 344 GEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 403
Query: 224 NSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRR 283
NS+I GL + A+ELF EM+ +PD+ T ++ + G +D + +
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 284 NGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGWKAFDC 343
+G V+ L++ + K ++A EIF+
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFD----------------------------- 494
Query: 344 FLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIE---PQVYHYACMVD 400
EME GV N VT+ L+ S VE D M ++E P Y Y ++
Sbjct: 495 --EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM----IMEGQKPDKYTYNSLLT 548
Query: 401 LLSRARLFDESVILIRSMPM---EPDVYVWGALLGGCQMHGNVELGEK----VALHLIDL 453
R ++ ++++M EPD+ +G L+ G G VE+ K + + I+L
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
Query: 454 EPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLKE 486
P HA+ + ++ K +A R +L++
Sbjct: 609 TP--HAYNPVIQGLFRKRKTTEAINLFREMLEQ 639
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 137/313 (43%), Gaps = 22/313 (7%)
Query: 64 KYGSFTYATNVF-HMIN---NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGI 119
K G A V MI +P+ YN +I + V++ A L + + GI
Sbjct: 342 KLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE-----ATELARVLTSKGI 396
Query: 120 FPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARK 179
P+ TF LI+G + + ++ G D F N LI+ + G L A
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 180 LFDEIPVT----DVVTWNSMVIGYLRNGGLDNALDLFRKMN----GKNIISWNSIITGLV 231
+ ++ ++ V+T+N+++ G+ + A ++F +M +N +++N++I GL
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516
Query: 232 QGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVV 291
+ ++A +L +M KPDK T S+L+ + G I + + NG E D+V
Sbjct: 517 KSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIV 576
Query: 292 IGTALVNMYGKCGLVQQAFEIFEEMPEKDTS----AWTAMISVFALHGLGWKAFDCFLEM 347
L++ K G V+ A ++ + K + A+ +I +A + F EM
Sbjct: 577 TYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636
Query: 348 -ERAGVKPNHVTF 359
E+ P+ V++
Sbjct: 637 LEQNEAPPDAVSY 649
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 151/352 (42%), Gaps = 34/352 (9%)
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKG-CTRW-MD 138
PD+ +N +I+ R+ AM L+++M G P+ T+ LI C++ +D
Sbjct: 398 PDVCTFNSLIQGLCLT-----RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452
Query: 139 GASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDV----VTWNS 194
A + ++ G V N+LI+ + A ++FDE+ V V VT+N+
Sbjct: 453 EALNMLKQMELS--GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 195 MVIGYLRNGGLDNALDLFRKM----NGKNIISWNSIITGLVQGGLAKEALELFHEMQQIS 250
++ G ++ +++A L +M + ++NS++T +GG K+A ++ M
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 251 VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAF 310
+PD +T +++S + G ++ + ++ GI ++ + +A
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAI 630
Query: 311 EIFEEMPEKDTSAWTAMISVFALHGLG------WKAFDCFLEMERAGVKPNHVTFV---- 360
+F EM E++ + A+ GL +A D +E+ G P +
Sbjct: 631 NLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAE 690
Query: 361 GLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESV 412
GLL+ LV + VM++ E +V MV L + R F +++
Sbjct: 691 GLLTLSMEETLV---KLVNMVMQKARFSEEEV----SMVKGLLKIRKFQDAL 735
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 124/320 (38%), Gaps = 62/320 (19%)
Query: 143 EIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP----VTDVVTWNSMVIG 198
EI HA++ +G DV N LI L A + +++P V D T+ +++ G
Sbjct: 174 EISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQG 233
Query: 199 YLRNGGLDNALDLFRKM-----NGKNIISWNSIITGLVQGGLAKEALELFHEM-QQISVK 252
Y+ G LD AL + +M + N+ S N I+ G + G ++AL EM Q
Sbjct: 234 YIEEGDLDGALRIREQMVEFGCSWSNV-SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292
Query: 253 PDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEI 312
PD+ T LVN K G V+ A EI
Sbjct: 293 PDQYTF-----------------------------------NTLVNGLCKAGHVKHAIEI 317
Query: 313 FEEMPEK----DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAH 368
+ M ++ D + ++IS G +A + +M PN VT+ L+S
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 377
Query: 369 SGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRAR-------LFDESVILIRSMPME 421
VE+ V+ ++ P V + ++ L R LF+E +RS E
Sbjct: 378 ENQVEEATELARVLTSKGIL-PDVCTFNSLIQGLCLTRNHRVAMELFEE----MRSKGCE 432
Query: 422 PDVYVWGALLGGCQMHGNVE 441
PD + + L+ G ++
Sbjct: 433 PDEFTYNMLIDSLCSKGKLD 452
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 147/318 (46%), Gaps = 23/318 (7%)
Query: 82 DLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIK---GCTRWMD 138
D+ +Y+ +I + VDD A+ L+ +M GI P+ T+ LI RW D
Sbjct: 239 DVVIYSTVIDSLCKYRHVDD-----ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 293
Query: 139 GASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPV----TDVVTWNS 194
+ + + +++ +V NSLI+ + G L A KLFDE+ ++VT+NS
Sbjct: 294 ASR---LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 350
Query: 195 MVIGYLRNGGLDNALDLFRKMNGKN----IISWNSIITGLVQGGLAKEALELFHEMQQIS 250
++ G+ + LD A +F M K+ ++++N++I G + + +ELF +M +
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410
Query: 251 VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAF 310
+ + +T +++ Q D+ + V + +G+ +++ L++ K G +++A
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 311 EIFEEMP----EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSAC 366
+FE + E D + M G +D F + GVKP+ + + ++S
Sbjct: 471 VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGF 530
Query: 367 AHSGLVEQGRWCFDVMKR 384
GL E+ F MK
Sbjct: 531 CKKGLKEEAYTLFIKMKE 548
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 146/308 (47%), Gaps = 18/308 (5%)
Query: 80 NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDG 139
NP++ +N +I A+A + A L+ +M+ I PN +T+ LI G
Sbjct: 307 NPNVVTFNSLIDAFA-----KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 140 ASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP----VTDVVTWNSM 195
+ + +V L DV N+LIN + + + +LF ++ V + VT+ ++
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 196 VIGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQISV 251
+ G+ + DNA +F++M NI+++N+++ GL + G ++A+ +F +Q+ +
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 252 KPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFE 311
+PD T + + G ++ G + L G++ DV+ +++ + K GL ++A+
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541
Query: 312 IF----EEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACA 367
+F E+ P D+ + +I G + + EM + T+ GL++
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDML 600
Query: 368 HSGLVEQG 375
H G +++G
Sbjct: 601 HDGRLDKG 608
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 172/417 (41%), Gaps = 66/417 (15%)
Query: 82 DLRVYNIMIRAYAGMDGVDDRHFCR------AMVLYKKMLCDGIFPNCLTFPFLIKGCTR 135
+L YNIMI CR A+ + KM+ G P+ +T L+ G
Sbjct: 99 NLYTYNIMINC-----------LCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCH 147
Query: 136 WMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVT----DVVT 191
+ + Q+V+ G+ D +L++ S A L + + V D+VT
Sbjct: 148 GNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 207
Query: 192 WNSMVIGYLRNGGLDNALDLFRKM-NGK---NIISWNSIITGLVQGGLAKEALELFHEMQ 247
+ +++ G + G D AL+L KM GK +++ ++++I L + +AL LF EM
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 248 QISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQ 307
++PD T +S++S G + S + I +VV +L++ + K G +
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327
Query: 308 QAFEIFEEMPEKDTS----AWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLL 363
+A ++F+EM ++ + ++I+ F +H +A F M P+ VT+ L+
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 364 SACAHSGLVEQGRWCFDVMKRVYLI----------------------------------E 389
+ + V G F M R L+
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447
Query: 390 PQVYHYACMVDLLSRARLFDESVIL---IRSMPMEPDVYVWGALLGGCQMHGNVELG 443
P + Y ++D L + ++++++ ++ MEPD+Y + + G G VE G
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 126/275 (45%), Gaps = 22/275 (8%)
Query: 188 DVVTWNSMVIGYLRNGGLDNALDLFRKM----NGKNIISWNSIITGLVQGGLAKEALELF 243
++ T+N M+ R L AL + KM G +I++ NS++ G G EA+ L
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 244 HEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKC 303
+M ++ +PD +T +++ Q + + G + D+V A++N K
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218
Query: 304 GLVQQAFEIFEEMP----EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
G A + +M E D ++ +I + A + F EM+ G++P+ T+
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 360 VGLLSA-CAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVD-------LLSRARLFDES 411
L+S C + + R D+++R I P V + ++D L+ +LFDE
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERK--INPNVVTFNSLIDAFAKEGKLIEAEKLFDE- 335
Query: 412 VILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKV 446
++ RS+ +P++ + +L+ G MH ++ +++
Sbjct: 336 -MIQRSI--DPNIVTYNSLINGFCMHDRLDEAQQI 367
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/412 (20%), Positives = 180/412 (43%), Gaps = 40/412 (9%)
Query: 48 DQYHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRA 107
D Y +IT L++C+ + P + +I + G+D+ A
Sbjct: 695 DAYKIITNFLYNCA-----------------DQPANLFWEDLIGSILAEAGIDN-----A 732
Query: 108 MVLYKKMLCDGIFP--NCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLI 165
+ ++++ +GI + + P + C + + G + N LI
Sbjct: 733 VSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLI 792
Query: 166 NLYMTCGLLSNARKLFDEIPVT----DVVTWNSMVIGYLRNGGLDNALDLFRKMNG---- 217
+ ++ A+ +F ++ T DV T+N ++ Y ++G +D +L+++M+
Sbjct: 793 GGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECE 852
Query: 218 KNIISWNSIITGLVQGGLAKEALELFHE-MQQISVKPDKITIASVLSACAQLGAIDHGKW 276
N I+ N +I+GLV+ G +AL+L+++ M P T ++ ++ G + K
Sbjct: 853 ANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQ 912
Query: 277 VHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFA 332
+ + G + I L+N +GK G A +F+ M ++ D ++ ++
Sbjct: 913 LFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLC 972
Query: 333 LHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQV 392
+ G + F E++ +G+ P+ V + +++ S +E+ F+ MK I P +
Sbjct: 973 MVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDL 1032
Query: 393 YHYACMVDLLSRARLFDESVIL---IRSMPMEPDVYVWGALLGGCQMHGNVE 441
Y Y ++ L A + +E+ + I+ +EP+V+ + AL+ G + G E
Sbjct: 1033 YTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPE 1084
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 170/395 (43%), Gaps = 36/395 (9%)
Query: 79 NNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMD 138
+ PD Y ++ ++ D+R + +M DG P+ +TF L+ +
Sbjct: 324 HKPDRVTYITLLDRFS-----DNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKA-- 376
Query: 139 GASGEIVHAQVV--KFGFLSDVFNGNSLINLYMTCGLL-----SNARKLFDEIPVTDV-- 189
G GE V G L ++ N+LI CGLL +A +LF + V
Sbjct: 377 GNFGEAFDTLDVMRDQGILPNLHTYNTLI-----CGLLRVHRLDDALELFGNMESLGVKP 431
Query: 190 --VTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELF 243
T+ + Y ++G +AL+ F KM K NI++ N+ + L + G +EA ++F
Sbjct: 432 TAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF 491
Query: 244 HEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKC 303
+ ++ I + PD +T ++ +++G ID + S + NG E DV++ +L+N K
Sbjct: 492 YGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKA 551
Query: 304 GLVQQAFEIFEEMPE----KDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTF 359
V +A+++F M E + +++ +G +A + F M + G PN +TF
Sbjct: 552 DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF 611
Query: 360 VGLLSA-CAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSM 418
L C + + + F +M + P V+ Y ++ L + E++ M
Sbjct: 612 NTLFDCLCKNDEVTLALKMLFKMMDMGCV--PDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669
Query: 419 P--MEPDVYVWGALLGGCQMHGNVELGEKVALHLI 451
+ PD LL G +E K+ + +
Sbjct: 670 KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFL 704
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 182/476 (38%), Gaps = 87/476 (18%)
Query: 103 HFC-RAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNG 161
FC AM +Y++M+ +G P+ T+ L+ G G D+ +
Sbjct: 202 RFCTEAMEVYRRMILEGFRPSLQTYSSLMVG-------------------LGKRRDIDSV 242
Query: 162 NSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMN----G 217
L+ T GL N V T+ + R G ++ A ++ ++M+ G
Sbjct: 243 MGLLKEMETLGLKPN------------VYTFTICIRVLGRAGKINEAYEILKRMDDEGCG 290
Query: 218 KNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWV 277
+++++ +I L A E+F +M+ KPD++T ++L + +D K
Sbjct: 291 PDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQF 350
Query: 278 HSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK------------------ 319
S + ++G DVV T LV+ K G +AF+ + M ++
Sbjct: 351 WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLR 410
Query: 320 -------------------DTSAWT--AMISVFALHGLGWKAFDCFLEMERAGVKPNHVT 358
+A+T I + G A + F +M+ G+ PN V
Sbjct: 411 VHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 470
Query: 359 FVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSM 418
L + A +G + + F +K + L+ P Y M+ S+ DE++ L+ M
Sbjct: 471 CNASLYSLAKAGRDREAKQIFYGLKDIGLV-PDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Query: 419 ---PMEPDVYVWGALLGGCQMHGNVELGEKVALHL--IDLEPHNHAFYMNLCDIYGKAGR 473
EPDV V +L+ V+ K+ + + + L+P Y L GK G+
Sbjct: 530 MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP-TVVTYNTLLAGLGKNGK 588
Query: 474 FDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQEFSAGGSSELPMKDLVLILDRLC 529
A L E VQK P + I N + L +K L ++D C
Sbjct: 589 IQEAIE----LFEGMVQKGCPP-NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC 639
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 159/386 (41%), Gaps = 55/386 (14%)
Query: 152 FGFLSDVFNGNSLINLYMTC----------GLLSNARKLFD----EIPVTDVVTWNSMVI 197
F + V +L++ TC G L +FD I D T+ ++
Sbjct: 102 FSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFK 161
Query: 198 GYLRNGGLDNALDLFRKMNG----KNIISWNSIITGLVQGGLAKEALELFHEMQQISVKP 253
GGL A RKM N S+N +I L++ EA+E++ M +P
Sbjct: 162 SLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRP 221
Query: 254 DKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIF 313
T +S++ + ID + + G++ +V T + + G+ G + +A+EI
Sbjct: 222 SLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEIL 281
Query: 314 EEMPEK----DTSAWTAMISVFALHGLGWKAFDC----FLEMERAGVKPNHVTFVGLLSA 365
+ M ++ D +T +I + DC F +M+ KP+ VT++ LL
Sbjct: 282 KRMDDEGCGPDVVTYTVLIDALCTA----RKLDCAKEVFEKMKTGRHKPDRVTYITLLDR 337
Query: 366 CAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDE---SVILIRSMPMEP 422
+ + ++ + + M++ + P V + +VD L +A F E ++ ++R + P
Sbjct: 338 FSDNRDLDSVKQFWSEMEKDGHV-PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396
Query: 423 DVYVWGALLGG----------CQMHGNVE-LGEKVALHLIDLEPHNHAFYMNLCDIYGKA 471
+++ + L+ G ++ GN+E LG K + Y+ D YGK+
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYT----------YIVFIDYYGKS 446
Query: 472 GRFDAAKRIRNLLKERRVQKKIPGCS 497
G +A +K + + I C+
Sbjct: 447 GDSVSALETFEKMKTKGIAPNIVACN 472
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 104/480 (21%), Positives = 198/480 (41%), Gaps = 74/480 (15%)
Query: 61 SFSKYGSFTYATNVFHMINN----PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLC 116
S +K G A +F+ + + PD YN+M++ Y+ + +D+ A+ L +M+
Sbjct: 477 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDE-----AIKLLSEMME 531
Query: 117 DGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSN 176
+G P+ + LI + + ++ + V N+L+ G +
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591
Query: 177 ARKLFDEIP----VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNG----KNIISWNSIIT 228
A +LF+ + + +T+N++ +N + AL + KM ++ ++N+II
Sbjct: 592 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651
Query: 229 GLVQGGLAKEALELFHEMQQISVKPDKITIASVLSA--------------------CAQL 268
GLV+ G KEA+ FH+M+++ V PD +T+ ++L CA
Sbjct: 652 GLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQ 710
Query: 269 GA----------------IDHGKWVHSYLRRNGI--ECDVVIGTALVNMYGKCGLVQQAF 310
A ID+ L NGI + D ++ ++ K V A
Sbjct: 711 PANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSIL-VPIIRYSCKHNNVSGAR 769
Query: 311 EIFEEMP-----EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSA 365
+FE+ + + +I + A D FL+++ G P+ T+ LL A
Sbjct: 770 TLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDA 829
Query: 366 CAHSGLVEQGRWCFDVMKRV--YLIEPQVYHYACMVDLLSRARLFDESVIL----IRSMP 419
SG +++ F++ K + + E + ++ L +A D+++ L +
Sbjct: 830 YGKSGKIDE---LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 886
Query: 420 MEPDVYVWGALLGGCQMHGNVELGEKVALHLIDL--EPHNHAFYMNLCDIYGKAGRFDAA 477
P +G L+ G G + +++ ++D P N A Y L + +GKAG DAA
Sbjct: 887 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP-NCAIYNILINGFGKAGEADAA 945
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 91/189 (48%), Gaps = 9/189 (4%)
Query: 106 RAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLI 165
A L++ ML G PNC + LI G + + + + ++VK G D+ + L+
Sbjct: 909 EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968
Query: 166 NLYMTCGLLSNARKLFDEIPVT----DVVTWNSMVIGYLRNGGLDNALDLFRKMNGK--- 218
+ G + F E+ + DVV +N ++ G ++ L+ AL LF +M
Sbjct: 969 DCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGI 1028
Query: 219 --NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKW 276
++ ++NS+I L G+ +EA ++++E+Q+ ++P+ T +++ + G +H
Sbjct: 1029 TPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYA 1088
Query: 277 VHSYLRRNG 285
V+ + G
Sbjct: 1089 VYQTMVTGG 1097
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 144/320 (45%), Gaps = 22/320 (6%)
Query: 61 SFSKYGSFTYATNVFHMINN----PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLC 116
S KY A ++F + P++ YN +I D A L ML
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSD-----ASRLLSNMLE 321
Query: 117 DGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSN 176
I PN +TF LI + E +H ++++ D N LIN + L
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 177 ARKLF------DEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSI 226
A+++F D +P ++ T+N+++ G+ + +++ ++LFR+M+ + N +++ +I
Sbjct: 382 AKQMFKFMVSKDCLP--NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 227 ITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGI 286
I G Q G A +F +M V D +T + +L G +D + YL+++ +
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 287 ECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK-DTSAWTAMISVFALHGLGWKAFDCFL 345
E ++ I ++ K G V +A+++F + K D + MIS L +A D F
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFR 559
Query: 346 EMERAGVKPNHVTFVGLLSA 365
+M+ G PN T+ L+ A
Sbjct: 560 KMKEDGTLPNSGTYNTLIRA 579
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 188/448 (41%), Gaps = 57/448 (12%)
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGA 140
P + +N ++ A A M+ F + L ++M GI + T+ I R +
Sbjct: 81 PSIVEFNKLLSAVAKMN-----KFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLS 135
Query: 141 SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEI------PVT------- 187
V A+++K G+ D+ +SL+N Y +S+A L D++ P T
Sbjct: 136 LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195
Query: 188 --------------------------DVVTWNSMVIGYLRNGGLDNALDLFRKMNG---- 217
D+VT+ ++V G + G +D AL+L KM
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIK 255
Query: 218 KNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWV 277
N++ +N+II L + + A++LF EM+ ++P+ +T S+++ G +
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
Query: 278 HSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFAL 333
S + I +VV AL++ + K G + +A ++ EEM ++ DT + +I+ F +
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 334 HGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVY 393
H +A F M PN T+ L++ VE G F M + L+ V
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV- 434
Query: 394 HYACMVDLLSRARLFDESVILIRSM---PMEPDVYVWGALLGGCQMHGNVELGEKVALHL 450
Y ++ +A D + ++ + M + D+ + LL G +G ++ + +L
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 451 IDLEPHNHAF-YMNLCDIYGKAGRFDAA 477
E + F Y + + KAG+ A
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEA 522
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 151/349 (43%), Gaps = 31/349 (8%)
Query: 106 RAMVLYKKMLCDGIFPNCLTFPFLIKG-CTR--------WMDGASGEIVHAQVVKFGFLS 156
A+ L +M+ G P+ +T+ ++ G C R ++ + A VV F
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF---- 261
Query: 157 DVFNGNSLINLYMTCGLLSNARKLFDEIPVT----DVVTWNSMVIGYLRNGGLDNALDLF 212
N++I+ + A LF E+ +VVT+NS++ G +A L
Sbjct: 262 -----NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 213 RKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQL 268
M K N++++N++I + G EA +L EM Q S+ PD IT +++
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Query: 269 GAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAW 324
+D K + ++ ++ L+N + KC V+ E+F EM ++ +T +
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Query: 325 TAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKR 384
T +I F G A F +M V + +T+ LL G ++ F +++
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK 496
Query: 385 VYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGG 433
+ E ++ Y M++ + +A E+ L S+ ++PDV + ++ G
Sbjct: 497 SEM-ELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISG 544
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 118/246 (47%), Gaps = 14/246 (5%)
Query: 28 LRELKRIHTQILTSPNLHSSDQYHLITRLLFSCSFSKYGSFTYATNVFHMINN----PDL 83
+E K + + L + S IT L F + A +F + + P++
Sbjct: 339 FKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNI 398
Query: 84 RVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGE 143
+ YN +I + V+D + L+++M G+ N +T+ +I+G + D S +
Sbjct: 399 QTYNTLINGFCKCKRVED-----GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQ 453
Query: 144 IVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTD----VVTWNSMVIGY 199
+V Q+V +D+ + L++ + G L A +F + ++ + +N+M+ G
Sbjct: 454 MVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGM 513
Query: 200 LRNGGLDNALDLFRKMNGK-NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITI 258
+ G + A DLF ++ K +++++N++I+GL L +EA +LF +M++ P+ T
Sbjct: 514 CKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTY 573
Query: 259 ASVLSA 264
+++ A
Sbjct: 574 NTLIRA 579
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/297 (19%), Positives = 134/297 (45%), Gaps = 13/297 (4%)
Query: 205 LDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIAS 260
+D+A+DLF M +I+ +N +++ + + + + L +MQ + + D T +
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 261 VLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPE-- 318
++ + + V + + + G E D+V ++L+N Y + A + ++M E
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 319 --KDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGR 376
DT +T +I LH +A +M + G +P+ VT+ +++ G ++
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 377 WCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP---MEPDVYVWGALLGG 433
+ M+ I+ V + ++D L + R + +V L M + P+V + +L+
Sbjct: 244 NLLNKMEAAR-IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 434 CQMHGNVELGEKVALHLIDLEPHNHAFYMN-LCDIYGKAGRFDAAKRIRNLLKERRV 489
+G ++ ++++ + + + N L D + K G+ A+++ + +R +
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 178/415 (42%), Gaps = 26/415 (6%)
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGA 140
PD R YNI+I + + ++ RA +K+M DG+ P+ +++ L+ +
Sbjct: 365 PDTRTYNILISLHTKNNDIE-----RAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVE 419
Query: 141 SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVT---WNSMVI 197
E + A++ D + ++L +Y+ +L + F V ++ +++ +
Sbjct: 420 EAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANID 479
Query: 198 GYLRNGGLDNALDLF---RKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPD 254
Y G L A +F +++N + +I +N +I ++A ELF M V PD
Sbjct: 480 AYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPD 539
Query: 255 KITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFE 314
K T +++ A G+ +R G D + A+++ + K G + A E+++
Sbjct: 540 KCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYK 599
Query: 315 EMP----EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSG 370
EM E D + +I+ FA G +A M+ AG+ N V + L+ G
Sbjct: 600 EMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVG 659
Query: 371 LVEQGRWCFDVM-----KRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM--EPD 423
+++ + + K Y P VY CM++L S + ++ + SM E +
Sbjct: 660 YLDEAEAIYRKLLQSCNKTQY---PDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEAN 716
Query: 424 VYVWGALLGGCQMHGNVELGEKVALHLIDLEPHNHAF-YMNLCDIYGKAGRFDAA 477
+ + +L + +G E ++A + +++ Y ++ ++ GRF A
Sbjct: 717 EFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEA 771
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 154/375 (41%), Gaps = 48/375 (12%)
Query: 159 FNGNSLINLYMTCGLLSNA----RKLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRK 214
+ N++I+ Y G + A +++ +E V VT+N+M+ Y NG L L +
Sbjct: 299 YTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKT 358
Query: 215 MN---GKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAI 271
M + ++N +I+ + + A F EM+ +KPD ++ ++L A + +
Sbjct: 359 MKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMV 418
Query: 272 DHGKWVHSYLRRNGIECDVVIGTALVNMY------------------------------- 300
+ + + + + + +E D +AL MY
Sbjct: 419 EEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANI 478
Query: 301 ---GKCGLVQQAFEIF---EEMPEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKP 354
G+ G + +A +F +E+ ++ + MI + + KA + F M GV P
Sbjct: 479 DAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTP 538
Query: 355 NHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDL--LSRARLFDESV 412
+ T+ L+ A + + +GR + M+ + + + A + L + + +E
Sbjct: 539 DKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVY 598
Query: 413 ILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLE-PHNHAFYMNLCDIYGKA 471
+ +EPDV V+G L+ GNV+ + + P N Y +L +Y K
Sbjct: 599 KEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKV 658
Query: 472 GRFDAAKRI-RNLLK 485
G D A+ I R LL+
Sbjct: 659 GYLDEAEAIYRKLLQ 673
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 148/326 (45%), Gaps = 27/326 (8%)
Query: 58 FSCSFSKYGSFTY---ATNVF---HMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLY 111
+S + YG Y A VF +N + YN+MI+AY + +A L+
Sbjct: 474 YSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCE-----KACELF 528
Query: 112 KKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTC 171
+ M+ G+ P+ T+ L++ G ++ + G++SD ++I+ ++
Sbjct: 529 ESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKL 588
Query: 172 GLLSNARKLFDEIPV----TDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISW 223
G L+ A +++ E+ DVV + ++ + G + A+ M N + +
Sbjct: 589 GQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIY 648
Query: 224 NSIITGLVQGGLAKEALELFHEMQQISVK---PDKITIASVLSACAQLGAIDHGKWVHSY 280
NS+I + G EA ++ ++ Q K PD T +++ ++ + + +
Sbjct: 649 NSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDS 708
Query: 281 LRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPE----KDTSAWTAMISVFALHGL 336
+++ G E + ++ MY K G ++A +I ++M E D ++ +++ +FAL G
Sbjct: 709 MKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGR 767
Query: 337 GWKAFDCFLEMERAGVKPNHVTFVGL 362
+A + F EM +G++P+ TF L
Sbjct: 768 FKEAVETFKEMVSSGIQPDDSTFKSL 793
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 23/225 (10%)
Query: 61 SFSKYGSFTYATNVF-HMIN---NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLC 116
SF K G A V+ M+ PD+ VY ++I A+A V +AM + M
Sbjct: 584 SFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQ-----QAMSYVEAMKE 638
Query: 117 DGIFPNCLTFPFLIKGCTR--WMDGASGEIVHAQVVKF---GFLSDVFNGNSLINLYMTC 171
GI N + + LIK T+ ++D A E ++ ++++ DV+ N +INLY
Sbjct: 639 AGIPGNSVIYNSLIKLYTKVGYLDEA--EAIYRKLLQSCNKTQYPDVYTSNCMINLYSER 696
Query: 172 GLLSNARKLFDEIPV---TDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNII----SWN 224
++ A +FD + + T+ M+ Y +NG + A + ++M I+ S+N
Sbjct: 697 SMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYN 756
Query: 225 SIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLG 269
S++ G KEA+E F EM ++PD T S+ + +LG
Sbjct: 757 SVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLG 801
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 178/398 (44%), Gaps = 26/398 (6%)
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKG-CTRWMDG 139
P +R Y ++I++ G + + A+ L K+M GI PN T+ LI C++
Sbjct: 321 PTVRTYTVLIKSLCGSERKSE-----ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFE 375
Query: 140 ASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPV----TDVVTWNSM 195
+ E++ Q+++ G + +V N+LIN Y G++ +A + + + + T+N +
Sbjct: 376 KARELL-GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
Query: 196 VIGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEMQQISV 251
+ GY ++ + A+ + KM + +++++NS+I G + G A L M +
Sbjct: 435 IKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Query: 252 KPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFE 311
PD+ T S++ + + ++ + L + G+ +VV+ TAL++ Y K G V +A
Sbjct: 494 VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHL 553
Query: 312 IFEEMPEK----DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACA 367
+ E+M K ++ + A+I G +A +M + G++P T L+
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL 613
Query: 368 HSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSR-ARLFDESVIL--IRSMPMEPDV 424
G + F M +P + Y + R RL D ++ +R + PD+
Sbjct: 614 KDGDFDHAYSRFQQMLSSG-TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 672
Query: 425 YVWGALLGGCQMHGNVELGEKVALHLIDL--EPHNHAF 460
+ + +L+ G G V + D EP H F
Sbjct: 673 FTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTF 710
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 175/409 (42%), Gaps = 45/409 (11%)
Query: 62 FSKYGSFTYATNVFHMINN----PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCD 117
+ K G A +V ++ + P+ R YN +I+ Y + +AM + KML
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC------KSNVHKAMGVLNKMLER 456
Query: 118 GIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNA 177
+ P+ +T+ LI G R + S + + + G + D + S+I+ + A
Sbjct: 457 KVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEA 516
Query: 178 RKLFDEIPVT----DVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNII----SWNSIITG 229
LFD + +VV + +++ GY + G +D A + KM KN + ++N++I G
Sbjct: 517 CDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHG 576
Query: 230 LVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECD 289
L G KEA L +M +I ++P T ++ + G DH + +G + D
Sbjct: 577 LCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPD 636
Query: 290 VVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTS----AWTAMISVFALHGLGWKAFDCFL 345
T + Y + G + A ++ +M E S ++++I + G AFD
Sbjct: 637 AHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLK 696
Query: 346 EMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRA 405
M G +P+ TF+ L+ +Q EP++ + M++
Sbjct: 697 RMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGS-----------EPELCAMSNMME----- 740
Query: 406 RLFDESVILIRSM---PMEPDVYVWGAL-LGGCQMHGNVELGEKVALHL 450
FD V L+ M + P+ + L LG C++ GN+ + EKV H+
Sbjct: 741 --FDTVVELLEKMVEHSVTPNAKSYEKLILGICEV-GNLRVAEKVFDHM 786
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/437 (20%), Positives = 181/437 (41%), Gaps = 66/437 (15%)
Query: 64 KYGSFTYATNVFHMINNPDLRV-YNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPN 122
K+ ++YA+ + +INN + V + I + D V D + + L +KM D F
Sbjct: 120 KHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALY--VLDLCRKMNKDERFE- 176
Query: 123 CLTFPFLIKGCTRWMDGASGEI--------VHAQVVKFGFLSDVFNGNSLINLYMTCGLL 174
L + +I GC + + V+ ++++ +++ N ++N Y G +
Sbjct: 177 -LKYKLII-GCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNV 234
Query: 175 SNARKLFDEIPVT----DVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSI 226
A + +I D T+ S+++GY + LD+A +F +M K N +++ +
Sbjct: 235 EEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHL 294
Query: 227 ITGLVQGGLAKEALELF-----------------------------------HEMQQISV 251
I GL EA++LF EM++ +
Sbjct: 295 IHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGI 354
Query: 252 KPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFE 311
KP+ T ++ + + + + + G+ +V+ AL+N Y K G+++ A +
Sbjct: 355 KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD 414
Query: 312 IFEEMPEK----DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACA 367
+ E M + +T + +I + + KA +M V P+ VT+ L+
Sbjct: 415 VVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 368 HSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPME---PDV 424
SG + +M L+ P + Y M+D L +++ +E+ L S+ + P+V
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLV-PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNV 532
Query: 425 YVWGALLGGCQMHGNVE 441
++ AL+ G G V+
Sbjct: 533 VMYTALIDGYCKAGKVD 549
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 140/332 (42%), Gaps = 56/332 (16%)
Query: 209 LDLFRKMNGKN---------IISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIA 259
LDL RKMN I +N+++ L + GL E +++ EM + V P+ T
Sbjct: 163 LDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYN 222
Query: 260 SVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMP-- 317
+++ +LG ++ S + G++ D T+L+ Y + + AF++F EMP
Sbjct: 223 KMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLK 282
Query: 318 --EKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQG 375
++ A+T +I + +A D F++M+ P T+ L+ + S E+
Sbjct: 283 GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS---ERK 339
Query: 376 RWCFDVMKRVYL--IEPQVYHYACMVDLLSRARLFDESVILIRSM---PMEPDVYVWGAL 430
+++K + I+P ++ Y ++D L F+++ L+ M + P+V + AL
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL 399
Query: 431 LGGCQMHGNVELGEKVA--LHLIDLEPHNHAF---------------------------- 460
+ G G +E V + L P+ +
Sbjct: 400 INGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVL 459
Query: 461 -----YMNLCDIYGKAGRFDAAKRIRNLLKER 487
Y +L D ++G FD+A R+ +L+ +R
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR 491
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 163/361 (45%), Gaps = 29/361 (8%)
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGA 140
PD+ YN +I+ Y G+D+ A + ++M GI P+ T+ LI G + +
Sbjct: 46 PDVITYNTLIKGYTRFIGIDE-----AYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLN 100
Query: 141 SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDE-------IPVTDVVTWN 193
+ +++ G D+++ N+L++ Y G A K+ E +P D T+N
Sbjct: 101 RVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGID--TYN 158
Query: 194 SMVIGYLRNGGLDNALDLFRKMNGK---NIISWNSIITGLVQGGLAKEALELFHEMQQIS 250
++ ++G DNA++LF+ + + ++++N +I GL + + E+++
Sbjct: 159 ILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSG 218
Query: 251 VKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAF 310
P+ +T ++L + I+ G + +++ G D A+V+ K G ++A+
Sbjct: 219 YTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAY 278
Query: 311 EIFEEM-----PEKDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPN---HVTFVGL 362
E E+ +D ++ +++++ G D E+E G+KP+ H V
Sbjct: 279 ECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNG 338
Query: 363 LSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPMEP 422
L ++G E+ C M ++P V C++D L +A D ++ L SM +
Sbjct: 339 LLNIGNTGGAEKHLACIGEMG----MQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVRD 394
Query: 423 D 423
+
Sbjct: 395 E 395
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 187/401 (46%), Gaps = 32/401 (7%)
Query: 102 RHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNG 161
R+ RA L + G+ P+ +T+ LIKG TR++ V ++ + G DV
Sbjct: 27 RNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTY 86
Query: 162 NSLINLYMTCGLLSNARKLFDEIPVT----DVVTWNSMVIGYLRNGGLDNALDLFRK--- 214
NSLI+ +L+ +LFDE+ + D+ ++N+++ Y + G A + +
Sbjct: 87 NSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIH 146
Query: 215 MNG--KNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKIT---IASVLSACAQLG 269
+ G I ++N ++ L + G A+ELF ++ VKP+ +T + + L ++G
Sbjct: 147 LAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVG 205
Query: 270 AIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWT 325
++D W+ L+++G + V T ++ MY K +++ ++F +M ++ D A
Sbjct: 206 SVD---WMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANC 262
Query: 326 AMISVFALHGLGWKAFDCFLEMERAGVKPNH-VTFVGLLSACAHSGLVEQGRWCFDVMKR 384
A++S G +A++C E+ R+G + V++ LL+ G ++ D+++
Sbjct: 263 AVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDA---VDDLLEE 319
Query: 385 VYL--IEPQVYHYACMVDLL---SRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGN 439
+ + ++P Y + +V+ L ++ + I M M+P V L+ G G+
Sbjct: 320 IEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGH 379
Query: 440 VELGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRI 480
V+ ++ +E + Y ++ K GR A ++
Sbjct: 380 VDRAMRL---FASMEVRDEFTYTSVVHNLCKDGRLVCASKL 417
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 163/389 (41%), Gaps = 23/389 (5%)
Query: 4 ISLIESKSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLIT--RLLFSCS 61
+ L+ES+ + ++ + LI+ ++R ++ N H S + +T
Sbjct: 179 VQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGL 238
Query: 62 FSKYGSFTYATNVFHMIN----NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCD 117
+ G+ A +VF + P YN+MI Y G + + + LY +M
Sbjct: 239 MKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLY----GKASKSYM-SWKLYCEMRSH 293
Query: 118 GIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNA 177
PN T+ L+ R E + Q+ + G DV+ N+L+ Y G A
Sbjct: 294 QCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGA 353
Query: 178 RKLFDEIP----VTDVVTWNSMVIGYLRNGGLDNALDLFRKMN----GKNIISWNSIITG 229
++F + D ++N MV Y R G +A +F +M + S +++
Sbjct: 354 AEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSA 413
Query: 230 LVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECD 289
+ + + EM + V+PD + S+L+ +LG + + + + D
Sbjct: 414 YSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTAD 473
Query: 290 VVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFALHGLGWKAFDCFL 345
+ L+N+YGK G +++ E+F E+ EK D WT+ I ++ L K + F
Sbjct: 474 ISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFE 533
Query: 346 EMERAGVKPNHVTFVGLLSACAHSGLVEQ 374
EM +G P+ T LLSAC+ VEQ
Sbjct: 534 EMIDSGCAPDGGTAKVLLSACSSEEQVEQ 562
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 171/371 (46%), Gaps = 37/371 (9%)
Query: 151 KFGFLSDVFNGNSLINLYMTCGLLSNARKLFDE------IPVTDVVTWNSMVIGYLRNGG 204
K F DV N LI+ Y A L+ + +P D T+ ++ Y G
Sbjct: 148 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTED--TYALLIKAYCMAGL 205
Query: 205 LDNALDLFRKMNGKNI-------ISWNSIITGLVQ-GGLAKEALELFHEMQQISVKPDKI 256
++ A + +M ++ +N+ I GL++ G +EA+++F M++ KP
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 257 TIASVLSACAQLGAIDHGKW-VHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEE 315
T +++ + + + W ++ +R + + ++ TALVN + + GL ++A EIFE+
Sbjct: 266 TYNLMINLYGK-ASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 324
Query: 316 MPE----KDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGL 371
+ E D + A++ ++ G + A + F M+ G +P+ ++ ++ A +GL
Sbjct: 325 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 384
Query: 372 VEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP---MEPDVYVWG 428
F+ MKR+ I P + + ++ S+AR + +++ M +EPD +V
Sbjct: 385 HSDAEAVFEEMKRLG-IAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLN 443
Query: 429 ALLGGCQMHGNVELGEKVALHLIDLEPHNH------AFYMNLCDIYGKAGRFDAAKRIRN 482
++L ++G LG+ + I E N + Y L +IYGKAG + + +
Sbjct: 444 SML---NLYGR--LGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFV 498
Query: 483 LLKERRVQKKI 493
LKE+ + +
Sbjct: 499 ELKEKNFRPDV 509
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/376 (20%), Positives = 146/376 (38%), Gaps = 73/376 (19%)
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
P+ + F LI + E ++ Q+++ ++ LI Y GL+ A +
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 212
Query: 181 FDEI------PVT-DVVTWNSMVIGYL-RNGGLDNALDLFRKMN---------------- 216
E+ P T V +N+ + G + R G + A+D+F++M
Sbjct: 213 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 272
Query: 217 --GK---------------------NIISWNSIITGLVQGGLAKEALELFHEMQQISVKP 253
GK NI ++ +++ + GL ++A E+F ++Q+ ++P
Sbjct: 273 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 332
Query: 254 DKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIF 313
D +++ + ++ G + S ++ G E D +V+ YG+ GL A +F
Sbjct: 333 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 392
Query: 314 EEMPEKDTSAWTAMISVFALHGLGWKAFDC------FLEMERAGVKPNHVTFVGLLSACA 367
EEM K M S L KA D EM GV+P+ +L+
Sbjct: 393 EEM--KRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYG 450
Query: 368 HSGLVEQGRWCFDVMKRVYLIEPQ-------VYHYACMVDLLSRARLF---DESVILIRS 417
G F M+++ L E + + Y ++++ +A +E + ++
Sbjct: 451 RLGQ-------FTKMEKI-LAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKE 502
Query: 418 MPMEPDVYVWGALLGG 433
PDV W + +G
Sbjct: 503 KNFRPDVVTWTSRIGA 518
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 163/389 (41%), Gaps = 23/389 (5%)
Query: 4 ISLIESKSLTLKNALSRLIEQCKNLRELKRIHTQILTSPNLHSSDQYHLIT--RLLFSCS 61
+ L+ES+ + ++ + LI+ ++R ++ N H S + +T
Sbjct: 201 VQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGL 260
Query: 62 FSKYGSFTYATNVFHMIN----NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCD 117
+ G+ A +VF + P YN+MI Y G + + + LY +M
Sbjct: 261 MKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLY----GKASKSYM-SWKLYCEMRSH 315
Query: 118 GIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNA 177
PN T+ L+ R E + Q+ + G DV+ N+L+ Y G A
Sbjct: 316 QCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGA 375
Query: 178 RKLFDEIP----VTDVVTWNSMVIGYLRNGGLDNALDLFRKMN----GKNIISWNSIITG 229
++F + D ++N MV Y R G +A +F +M + S +++
Sbjct: 376 AEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSA 435
Query: 230 LVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECD 289
+ + + EM + V+PD + S+L+ +LG + + + + D
Sbjct: 436 YSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTAD 495
Query: 290 VVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFALHGLGWKAFDCFL 345
+ L+N+YGK G +++ E+F E+ EK D WT+ I ++ L K + F
Sbjct: 496 ISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFE 555
Query: 346 EMERAGVKPNHVTFVGLLSACAHSGLVEQ 374
EM +G P+ T LLSAC+ VEQ
Sbjct: 556 EMIDSGCAPDGGTAKVLLSACSSEEQVEQ 584
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 172/369 (46%), Gaps = 33/369 (8%)
Query: 151 KFGFLSDVFNGNSLINLYMTCGLLSNARKLFDE------IPVTDVVTWNSMVIGYLRNGG 204
K F DV N LI+ Y A L+ + +P D T+ ++ Y G
Sbjct: 170 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTED--TYALLIKAYCMAGL 227
Query: 205 LDNALDLFRKMNGKNI-------ISWNSIITGLVQ-GGLAKEALELFHEMQQISVKPDKI 256
++ A + +M ++ +N+ I GL++ G +EA+++F M++ KP
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 257 TIASVLSACAQLGAIDHGKW-VHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEE 315
T +++ + + + W ++ +R + + ++ TALVN + + GL ++A EIFE+
Sbjct: 288 TYNLMINLYGK-ASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 346
Query: 316 MPE----KDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGL 371
+ E D + A++ ++ G + A + F M+ G +P+ ++ ++ A +GL
Sbjct: 347 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 406
Query: 372 VEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMP---MEPDVYVWG 428
F+ MKR+ I P + + ++ S+AR + +++ M +EPD +V
Sbjct: 407 HSDAEAVFEEMKRLG-IAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLN 465
Query: 429 ALLGGCQMHGNVELGEKVALHLIDLE----PHNHAFYMNLCDIYGKAGRFDAAKRIRNLL 484
++L ++G + K+ L ++E + + Y L +IYGKAG + + + L
Sbjct: 466 SML---NLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 522
Query: 485 KERRVQKKI 493
KE+ + +
Sbjct: 523 KEKNFRPDV 531
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/376 (20%), Positives = 146/376 (38%), Gaps = 73/376 (19%)
Query: 121 PNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKL 180
P+ + F LI + E ++ Q+++ ++ LI Y GL+ A +
Sbjct: 175 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 234
Query: 181 FDEI------PVT-DVVTWNSMVIGYL-RNGGLDNALDLFRKMN---------------- 216
E+ P T V +N+ + G + R G + A+D+F++M
Sbjct: 235 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 294
Query: 217 --GK---------------------NIISWNSIITGLVQGGLAKEALELFHEMQQISVKP 253
GK NI ++ +++ + GL ++A E+F ++Q+ ++P
Sbjct: 295 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 354
Query: 254 DKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIF 313
D +++ + ++ G + S ++ G E D +V+ YG+ GL A +F
Sbjct: 355 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 414
Query: 314 EEMPEKDTSAWTAMISVFALHGLGWKAFDC------FLEMERAGVKPNHVTFVGLLSACA 367
EEM K M S L KA D EM GV+P+ +L+
Sbjct: 415 EEM--KRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYG 472
Query: 368 HSGLVEQGRWCFDVMKRVYLIEPQ-------VYHYACMVDLLSRARLF---DESVILIRS 417
G F M+++ L E + + Y ++++ +A +E + ++
Sbjct: 473 RLGQ-------FTKMEKI-LAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKE 524
Query: 418 MPMEPDVYVWGALLGG 433
PDV W + +G
Sbjct: 525 KNFRPDVVTWTSRIGA 540
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 167/355 (47%), Gaps = 34/355 (9%)
Query: 118 GIFPNCLTFPFLIKGCTRWMDGASGEIVH--AQVVKFGFLSDVFNGNSLINLYMTCGLLS 175
G P+ +TF L+ G ++G E V ++V+ D+ ++LIN G +S
Sbjct: 135 GYEPDTITFSTLVNGFC--LEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 176 NARKLFDEIP----VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNI----ISWNSII 227
A L D + D VT+ ++ ++G ALDLFRKM +NI + ++ +I
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 228 TGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHG-KWVHSYLRRNGI 286
L + G +AL LF+EM+ +K D +T +S++ G D G K + + RN I
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 287 ECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFALHGLGWKAFD 342
DVV +AL++++ K G + +A E++ EM + DT + ++I F +A
Sbjct: 313 P-DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 371
Query: 343 CFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMV--- 399
F M G +P+ VT+ L+++ + V+ G F + LI P Y +V
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI-PNTITYNTLVLGF 430
Query: 400 ----DLLSRARLFDESVILIRSMPMEPDVYVWGALLGGC----QMHGNVELGEKV 446
L + LF E V R +P P V +G LL G +++ +E+ EK+
Sbjct: 431 CQSGKLNAAKELFQEMV--SRGVP--PSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 158/341 (46%), Gaps = 29/341 (8%)
Query: 64 KYGSFTYATNVFHMINNPDLRV----YNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGI 119
K G+ A ++F + +++ Y+I+I + DD A+ L+ +M GI
Sbjct: 222 KSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDD-----ALSLFNEMEMKGI 276
Query: 120 FPNCLTFPFLIKG-CT--RWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSN 176
+ +T+ LI G C +W DGA + +++ + DV ++LI++++ G L
Sbjct: 277 KADVVTYSSLIGGLCNDGKWDDGAK---MLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333
Query: 177 ARKLFDEIPV----TDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSIIT 228
A++L++E+ D +T+NS++ G+ + L A +F M K +I++++ +I
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 229 GLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIEC 288
+ + + LF E+ + P+ IT +++ Q G ++ K + + G+
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453
Query: 289 DVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSAWTAMISVFALHGLGW-----KAFDC 343
VV L++ G + +A EIFE+M + + + ++ +HG+ A+
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII-IHGMCNASKVDDAWSL 512
Query: 344 FLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKR 384
F + GVKP+ VT+ ++ G + + F MK
Sbjct: 513 FCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 154/348 (44%), Gaps = 23/348 (6%)
Query: 104 FCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNS 163
FC+ M L +GI + T +I R V + K G+ D ++
Sbjct: 92 FCKGMEL------NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFST 145
Query: 164 LINLYMTCGLLSNARKLFDEI----PVTDVVTWNSMVIGYLRNGGLDNALDLFRKMN--- 216
L+N + G +S A L D + D+VT ++++ G G + AL L +M
Sbjct: 146 LVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 205
Query: 217 -GKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGK 275
+ +++ ++ L + G + AL+LF +M++ ++K + + V+ + + G+ D
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265
Query: 276 WVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVF 331
+ + + GI+ DVV ++L+ G ++ EM + D ++A+I VF
Sbjct: 266 SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 325
Query: 332 ALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQ 391
G +A + + EM G+ P+ +T+ L+ + + FD+M EP
Sbjct: 326 VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG-CEPD 384
Query: 392 VYHYACMVDLLSRARLFDESVILIRSMPME---PDVYVWGAL-LGGCQ 435
+ Y+ +++ +A+ D+ + L R + + P+ + L LG CQ
Sbjct: 385 IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 145/327 (44%), Gaps = 18/327 (5%)
Query: 61 SFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDG--VDDRHFCRAMVLYKKMLCDG 118
S K GSF A ++F N +++ + Y+ + G +D + + ++M+
Sbjct: 254 SLCKDGSFDDALSLF---NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 119 IFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNAR 178
I P+ +TF LI + + ++ +++ G D NSLI+ + L A
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 179 KLFDEIPVT----DVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGL 230
++FD + D+VT++ ++ Y + +D+ + LFR+++ K N I++N+++ G
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 231 VQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDV 290
Q G A ELF EM V P +T +L G ++ + ++++ + +
Sbjct: 431 CQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGI 490
Query: 291 VIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFALHGLGWKAFDCFLE 346
I +++ V A+ +F + +K D + MI G +A F +
Sbjct: 491 GIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRK 550
Query: 347 MERAGVKPNHVTFVGLLSA-CAHSGLV 372
M+ G P+ T+ L+ A SGL+
Sbjct: 551 MKEDGCTPDDFTYNILIRAHLGGSGLI 577
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 157/361 (43%), Gaps = 24/361 (6%)
Query: 64 KYGSFTYATNVFHMIN----NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGI 119
K GS A N+F+ + D+ +Y +IR + DD L + M+ I
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD-----GAKLLRDMIKRKI 313
Query: 120 FPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARK 179
P+ + F LI + E +H ++++ G D SLI+ + L A
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 180 LFDEIPVT----DVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNII----SWNSIITGLV 231
+ D + ++ T+N ++ GY + +D+ L+LFRKM+ + ++ ++N++I G
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 232 QGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVV 291
+ G + A ELF EM V+PD ++ +L G + + + ++ +E D+
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG 493
Query: 292 IGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFALHGLGWKAFDCFLEM 347
I +++ V A+++F +P K D + MI G +A F +M
Sbjct: 494 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553
Query: 348 ERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRV-YLIEPQVYHYACMVDLLSRAR 406
E G PN T+ L+ A G + + +KR + ++ +VD+LS R
Sbjct: 554 EEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKM--VVDMLSDGR 611
Query: 407 L 407
L
Sbjct: 612 L 612
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 170/381 (44%), Gaps = 23/381 (6%)
Query: 76 HMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTF-PFLIKGCT 134
M + P L N ++ V D A++L +M+ G PN +T+ P L C
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSD-----AVLLIDRMVETGFQPNEVTYGPVLKVMCK 224
Query: 135 RWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPV----TDVV 190
+ E++ ++ + D + +I+ G L NA LF+E+ + D++
Sbjct: 225 SGQTALAMELLR-KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 283
Query: 191 TWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEALELFHEM 246
+ +++ G+ G D+ L R M + ++++++++I V+ G +EA EL EM
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 247 QQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLV 306
Q + PD +T S++ + +D + + G ++ L+N Y K L+
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLI 403
Query: 307 QQAFEIFEEMPEK----DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGL 362
E+F +M + DT + +I F G A + F EM V+P+ V++ L
Sbjct: 404 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKIL 463
Query: 363 LSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM-- 420
L +G E+ F+ +++ + E + Y ++ + A D++ L S+P+
Sbjct: 464 LDGLCDNGEPEKALEIFEKIEKSKM-ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 421 -EPDVYVWGALLGGCQMHGNV 440
+PDV + ++GG G++
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSL 543
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 162/359 (45%), Gaps = 20/359 (5%)
Query: 110 LYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYM 169
L K+M GI N T +I C R + +++K G+ D ++LIN
Sbjct: 94 LCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLC 153
Query: 170 TCGLLSNARKLFDEI------PVTDVVTWNSMVIGYLRNGGLDNALDLFRKM--NG--KN 219
G +S A +L D + P ++T N++V G NG + +A+ L +M G N
Sbjct: 154 LEGRVSEALELVDRMVEMGHKPT--LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211
Query: 220 IISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHS 279
+++ ++ + + G A+EL +M++ +K D + + ++ + G++D+ + +
Sbjct: 212 EVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 271
Query: 280 YLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFALHG 335
+ G + D++I T L+ + G ++ +M ++ D A++A+I F G
Sbjct: 272 EMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEG 331
Query: 336 LGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHY 395
+A + EM + G+ P+ VT+ L+ +++ D+M P + +
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG-CGPNIRTF 390
Query: 396 ACMVDLLSRARLFDESVILIRSMPME---PDVYVWGALLGGCQMHGNVELGEKVALHLI 451
+++ +A L D+ + L R M + D + L+ G G +E+ +++ ++
Sbjct: 391 NILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 145/329 (44%), Gaps = 26/329 (7%)
Query: 96 MDGV-DDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKG---CTRWMDGASGEIVHAQVVK 151
+DG+ D A L+ +M G + + + LI+G RW DGA + ++K
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAK---LLRDMIK 310
Query: 152 FGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP----VTDVVTWNSMVIGYLRNGGLDN 207
DV ++LI+ ++ G L A +L E+ D VT+ S++ G+ + LD
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370
Query: 208 A---LDLF-RKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLS 263
A LDL K G NI ++N +I G + L + LELF +M V D +T +++
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430
Query: 264 ACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTSA 323
+LG ++ K + + + D+V L++ G ++A EIFE++ EK
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI-EKSKME 489
Query: 324 WTAMISVFALHGLGW-----KAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWC 378
I +HG+ A+D F + GVKP+ T+ ++ G + +
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549
Query: 379 FDVMKRVYLIEPQVYHYACMVDLLSRARL 407
F M+ E C ++L RA L
Sbjct: 550 FRKME-----EDGHSPNGCTYNILIRAHL 573
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 109/243 (44%), Gaps = 14/243 (5%)
Query: 219 NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVH 278
+ ++++++I GL G EALEL M ++ KP IT+ ++++ G + +
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200
Query: 279 SYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFALH 334
+ G + + V ++ + K G A E+ +M E+ D ++ +I
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD 260
Query: 335 GLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQG-RWCFDVMKRVYLIEPQVY 393
G AF+ F EME G K + + + L+ ++G + G + D++KR I P V
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK--ITPDVV 318
Query: 394 HYACMVDLLSRARLFDESVILIRSM---PMEPDVYVWGALLGGCQMHGNVELGEKVALHL 450
++ ++D + E+ L + M + PD + +L+ G ++ A H+
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD----KANHM 374
Query: 451 IDL 453
+DL
Sbjct: 375 LDL 377
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 159/381 (41%), Gaps = 60/381 (15%)
Query: 80 NPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDG 139
P + Y +I Y + + +A+ + + M +G+ N T+ +I G + D
Sbjct: 481 TPTVVTYGCLINLYTKVGKI-----SKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDW 535
Query: 140 ASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEI------PVTDVVTWN 193
A+ V +VK G DV N++I+ + G + A + E+ P T T+
Sbjct: 536 ANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR--TFM 593
Query: 194 SMVIGYLRNGGLDNALDLFRKMNG----KNIISWNSIITGLVQGGLAKEALELFHEMQQI 249
++ GY ++G + +L++F M + ++N +I GLV+ ++A+E+ EM
Sbjct: 594 PIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLA 653
Query: 250 SVKPDKITIASVLSACAQLGAIDHGKWVHSYLR--RNGIECDVVIGTALVNMYGKCGLVQ 307
V ++ T ++ A +G D GK + R G++ D+ AL+ K G +Q
Sbjct: 654 GVSANEHTYTKIMQGYASVG--DTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQ 711
Query: 308 QAFEIFEEMPEK---------------------------------------DTSAWTAMI 328
A + +EM + D +T+ I
Sbjct: 712 SALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFI 771
Query: 329 SVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLI 388
S + G +A EME GVKPN T+ L+ A + L E+ C++ MK + +
Sbjct: 772 SACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIK 831
Query: 389 EPQVYHYACMVDLLSRARLFD 409
+ ++ + LLSRA + +
Sbjct: 832 PDKAVYHCLLTSLLSRASIAE 852
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 134/315 (42%), Gaps = 52/315 (16%)
Query: 49 QYHLITRLLFSCSFSKYGSFTYATNVFH-MIN---NPDLRVYNIMIRAYAGMDGVDDRHF 104
+++L T + F K + A VF M+ PD+ +YN +I A+ GM +D
Sbjct: 516 KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMD---- 571
Query: 105 CRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSL 164
RA+ K+M P TF +I G + D V + + G + V N L
Sbjct: 572 -RAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGL 630
Query: 165 INLYMTCGLLSNARKLFDEIPVTDVV----TWNSMVIGY---------------LRNGGL 205
IN + + A ++ DE+ + V T+ ++ GY L+N GL
Sbjct: 631 INGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 690
Query: 206 D--------------------NALDLFRKMNGKNI----ISWNSIITGLVQGGLAKEALE 241
D +AL + ++M+ +NI +N +I G + G EA +
Sbjct: 691 DVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAAD 750
Query: 242 LFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYG 301
L +M++ VKPD T S +SAC++ G ++ + G++ ++ T L+ +
Sbjct: 751 LIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWA 810
Query: 302 KCGLVQQAFEIFEEM 316
+ L ++A +EEM
Sbjct: 811 RASLPEKALSCYEEM 825
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 158/362 (43%), Gaps = 22/362 (6%)
Query: 73 NVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKG 132
+ F I+ P + +M++ Y G G D H RA +++M GI P + LI
Sbjct: 299 SAFEKISKPSRTEFGLMVKFY-GRRG--DMH--RARETFERMRARGITPTSRIYTSLIHA 353
Query: 133 CT--RWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIP----V 186
R MD A + ++ + G + + ++ + G A FDE
Sbjct: 354 YAVGRDMDEALSCV--RKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKT 411
Query: 187 TDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNIIS----WNSIITGLVQGGLAKEALEL 242
+ + ++ + + ++ A L R+M + I + +++++ G K+ L +
Sbjct: 412 LNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVV 471
Query: 243 FHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGK 302
F +++ P +T +++ ++G I V ++ G++ ++ + ++N + K
Sbjct: 472 FKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVK 531
Query: 303 CGLVQQAFEIFEEMPEK----DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVT 358
AF +FE+M ++ D + +IS F G +A EM++ +P T
Sbjct: 532 LKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRT 591
Query: 359 FVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSM 418
F+ ++ A SG + + FD+M+R + P V+ + +++ L R +++V ++ M
Sbjct: 592 FMPIIHGYAKSGDMRRSLEVFDMMRRCGCV-PTVHTFNGLINGLVEKRQMEKAVEILDEM 650
Query: 419 PM 420
+
Sbjct: 651 TL 652
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 101/225 (44%), Gaps = 22/225 (9%)
Query: 296 LVNMYGKCGLVQQAFEIFEEMPEKDTSA----WTAMISVFALHGLGWKAFDCFLEMERAG 351
+V YG+ G + +A E FE M + + +T++I +A+ +A C +M+ G
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 352 VKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYL-----IEPQVYHYACMVDLLSRAR 406
++ + VT+ ++ + +G E + FD KR++ I ++ + C + RA
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 434
Query: 407 LFDESVILIRSMPME---PDVYVWGALLGGCQMHGNVELGEKVALHLID--LEPHNHAFY 461
L+R M E + ++ ++ G M + + G V L + P Y
Sbjct: 435 ------ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP-TVVTY 487
Query: 462 MNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPGCSMIEINGVVQ 506
L ++Y K G+ A + ++KE V+ + SM+ ING V+
Sbjct: 488 GCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMM-INGFVK 531
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 202/460 (43%), Gaps = 41/460 (8%)
Query: 61 SFSKYGSFTYATNVFHMINN----PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLC 116
+F K G A +F + P++ +N +I GM G D F + +KM+
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL-GMCGRYDEAF----MFKEKMVE 323
Query: 117 DGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSN 176
G+ P +T+ L+KG TR V ++ K GF +V N+LI+ ++ G L+
Sbjct: 324 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 177 ARKLFDEIPVTDV----VTWNSMVIGYLRNGGLDNALDLFRKM--NGKNII--SWNSIIT 228
A ++ D + + T+N+++ GY +NG DNA L ++M G N+ S+ S+I
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 229 GLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLR--RNGI 286
L + AL EM ++ P + +++S + G H K + + + G
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK--HSKALELWFQFLNKGF 501
Query: 287 ECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFALHGLGWKAFD 342
D AL++ + G + +AF I +E+ + D ++ +IS +AF
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 343 CFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLL 402
EM + G+KP++ T+ L+ + VE+ +D KR ++ P VY Y+ M+D
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML-PDVYTYSVMIDGC 620
Query: 403 SRARLFDESVILIRSM---PMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPH--- 456
+A +E M ++P+ V+ L+ G + + AL L + H
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM----ALELREDMKHKGI 676
Query: 457 --NHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIP 494
N A Y +L R + AK L +E R++ P
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKL---LFEEMRMEGLEP 713
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 175/405 (43%), Gaps = 37/405 (9%)
Query: 61 SFSKYGSFTYATNVFHMINNPDLRV----YNIMIRAYAGMDGVDDRHFCRAMVLYKKMLC 116
SF + GS A + ++ + L + YN +I+ Y D+ A L K+ML
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADN-----AERLLKEMLS 428
Query: 117 DGIFPNCLTFPFLI-KGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLS 175
G N +F +I C+ M ++ V + L ++ G L+ ++ GL
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML-----LRNMSPGGGLLTTLIS-GLCK 482
Query: 176 NAR---------KLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIIS 222
+ + + ++ V D T N+++ G G LD A + +++ G+ + +S
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 542
Query: 223 WNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLR 282
+N++I+G EA EM + +KPD T + ++ + ++ +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 283 RNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKD----TSAWTAMISVFALHGLGW 338
RNG+ DV + +++ K ++ E F+EM K+ T + +I + G
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 339 KAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACM 398
A + +M+ G+ PN T+ L+ + VE+ + F+ M R+ +EP V+HY +
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTAL 721
Query: 399 VDLLSRARLFDESVILIRSM---PMEPDVYVWGALLGGCQMHGNV 440
+D + + L+R M + P+ + ++GG GNV
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 138/317 (43%), Gaps = 31/317 (9%)
Query: 64 KYGSFTYATNV-FHMINNP---DLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGI 119
K+G + A + F +N D R N ++ +D+ A + K++L G
Sbjct: 482 KHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE-----AFRIQKEILGRGC 536
Query: 120 FPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLS---- 175
+ +++ LI GC + ++VK G D + + LI CGL +
Sbjct: 537 VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI-----CGLFNMNKV 591
Query: 176 -NARKLFDEIP----VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNI----ISWNSI 226
A + +D+ + DV T++ M+ G + + + F +M KN+ + +N +
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 227 ITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGI 286
I + G ALEL +M+ + P+ T S++ + + ++ K + +R G+
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Query: 287 ECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTS----AWTAMISVFALHGLGWKAFD 342
E +V TAL++ YGK G + + + EM K+ +T MI +A G +A
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 771
Query: 343 CFLEMERAGVKPNHVTF 359
EM G+ P+ +T+
Sbjct: 772 LLNEMREKGIVPDSITY 788
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 171/432 (39%), Gaps = 39/432 (9%)
Query: 107 AMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLIN 166
A+ ++ + G+FP+ T L+ R + V K G DV+ + IN
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAIN 268
Query: 167 LYMTCGLLSNARKLFDEIP----VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK---- 218
+ G + A KLF ++ +VVT+N+++ G G D A KM +
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 219 NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVH 278
+I+++ ++ GL + +A + EM + P+ I +++ + + G+++ +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 279 SYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPE----KDTSAWTAMISVFALH 334
+ G+ L+ Y K G A + +EM + ++T++I + H
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 335 GLGWKAFDCFLEMERAGVKPNHVTFVGLLSA-CAHSGLVEQGRWCFDVMKRVYLIEPQ-- 391
+ A EM + P L+S C H + F + + ++++ +
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 392 --VYHYACMVDLLSRA-RLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVAL 448
+ H C L A R+ E IL R M D + L+ GC G +L E A
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKE--ILGRGCVM--DRVSYNTLISGC--CGKKKLDE--AF 560
Query: 449 HLID------LEPHNHAFYMNLCDIYG-----KAGRF-DAAKRIRNLLKERRVQKKIPGC 496
+D L+P N+ + + +C ++ +A +F D KR L I GC
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620
Query: 497 SMIEINGVVQEF 508
E QEF
Sbjct: 621 CKAERTEEGQEF 632
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 92/214 (42%), Gaps = 28/214 (13%)
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGA 140
PD+ Y++MI + ++ + +M+ + PN + + LI+ R +
Sbjct: 608 PDVYTYSVMIDGCCKAERTEE-----GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 141 SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPV----TDVVTWNSMV 196
+ + G + SLI + A+ LF+E+ + +V + +++
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 197 IGYLRNGGLDNALDLFRKMNGKNI----ISWNSIITGLVQGGLAKEALELFHEMQQISVK 252
GY + G + L R+M+ KN+ I++ +I G + G EA L +EM++ +
Sbjct: 723 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Query: 253 PDKITIASVLSACAQLGAIDHGKWVHSYLRRNGI 286
PD IT + ++++ YL++ G+
Sbjct: 783 PDSIT---------------YKEFIYGYLKQGGV 801
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 202/460 (43%), Gaps = 41/460 (8%)
Query: 61 SFSKYGSFTYATNVFHMINN----PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLC 116
+F K G A +F + P++ +N +I GM G D F + +KM+
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL-GMCGRYDEAF----MFKEKMVE 323
Query: 117 DGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSN 176
G+ P +T+ L+KG TR V ++ K GF +V N+LI+ ++ G L+
Sbjct: 324 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 177 ARKLFDEIPVTDV----VTWNSMVIGYLRNGGLDNALDLFRKM--NGKNII--SWNSIIT 228
A ++ D + + T+N+++ GY +NG DNA L ++M G N+ S+ S+I
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 229 GLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLR--RNGI 286
L + AL EM ++ P + +++S + G H K + + + G
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK--HSKALELWFQFLNKGF 501
Query: 287 ECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFALHGLGWKAFD 342
D AL++ + G + +AF I +E+ + D ++ +IS +AF
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 343 CFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACMVDLL 402
EM + G+KP++ T+ L+ + VE+ +D KR ++ P VY Y+ M+D
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML-PDVYTYSVMIDGC 620
Query: 403 SRARLFDESVILIRSM---PMEPDVYVWGALLGGCQMHGNVELGEKVALHLIDLEPH--- 456
+A +E M ++P+ V+ L+ G + + AL L + H
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM----ALELREDMKHKGI 676
Query: 457 --NHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIP 494
N A Y +L R + AK L +E R++ P
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKL---LFEEMRMEGLEP 713
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 175/405 (43%), Gaps = 37/405 (9%)
Query: 61 SFSKYGSFTYATNVFHMINNPDLRV----YNIMIRAYAGMDGVDDRHFCRAMVLYKKMLC 116
SF + GS A + ++ + L + YN +I+ Y D+ A L K+ML
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADN-----AERLLKEMLS 428
Query: 117 DGIFPNCLTFPFLI-KGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLS 175
G N +F +I C+ M ++ V + L ++ G L+ ++ GL
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML-----LRNMSPGGGLLTTLIS-GLCK 482
Query: 176 NAR---------KLFDEIPVTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIIS 222
+ + + ++ V D T N+++ G G LD A + +++ G+ + +S
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 542
Query: 223 WNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLR 282
+N++I+G EA EM + +KPD T + ++ + ++ +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 283 RNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKD----TSAWTAMISVFALHGLGW 338
RNG+ DV + +++ K ++ E F+EM K+ T + +I + G
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 339 KAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYLIEPQVYHYACM 398
A + +M+ G+ PN T+ L+ + VE+ + F+ M R+ +EP V+HY +
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTAL 721
Query: 399 VDLLSRARLFDESVILIRSM---PMEPDVYVWGALLGGCQMHGNV 440
+D + + L+R M + P+ + ++GG GNV
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 138/317 (43%), Gaps = 31/317 (9%)
Query: 64 KYGSFTYATNV-FHMINNP---DLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGI 119
K+G + A + F +N D R N ++ +D+ A + K++L G
Sbjct: 482 KHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE-----AFRIQKEILGRGC 536
Query: 120 FPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLS---- 175
+ +++ LI GC + ++VK G D + + LI CGL +
Sbjct: 537 VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI-----CGLFNMNKV 591
Query: 176 -NARKLFDEIP----VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGKNI----ISWNSI 226
A + +D+ + DV T++ M+ G + + + F +M KN+ + +N +
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 227 ITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGI 286
I + G ALEL +M+ + P+ T S++ + + ++ K + +R G+
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Query: 287 ECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEKDTS----AWTAMISVFALHGLGWKAFD 342
E +V TAL++ YGK G + + + EM K+ +T MI +A G +A
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 771
Query: 343 CFLEMERAGVKPNHVTF 359
EM G+ P+ +T+
Sbjct: 772 LLNEMREKGIVPDSITY 788
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 171/432 (39%), Gaps = 39/432 (9%)
Query: 107 AMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLIN 166
A+ ++ + G+FP+ T L+ R + V K G DV+ + IN
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAIN 268
Query: 167 LYMTCGLLSNARKLFDEIP----VTDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK---- 218
+ G + A KLF ++ +VVT+N+++ G G D A KM +
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 219 NIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVH 278
+I+++ ++ GL + +A + EM + P+ I +++ + + G+++ +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 279 SYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPE----KDTSAWTAMISVFALH 334
+ G+ L+ Y K G A + +EM + ++T++I + H
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 335 GLGWKAFDCFLEMERAGVKPNHVTFVGLLSA-CAHSGLVEQGRWCFDVMKRVYLIEPQ-- 391
+ A EM + P L+S C H + F + + ++++ +
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 392 --VYHYACMVDLLSRA-RLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVAL 448
+ H C L A R+ E IL R M D + L+ GC G +L E A
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKE--ILGRGCVM--DRVSYNTLISGC--CGKKKLDE--AF 560
Query: 449 HLID------LEPHNHAFYMNLCDIYG-----KAGRF-DAAKRIRNLLKERRVQKKIPGC 496
+D L+P N+ + + +C ++ +A +F D KR L I GC
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620
Query: 497 SMIEINGVVQEF 508
E QEF
Sbjct: 621 CKAERTEEGQEF 632
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 92/214 (42%), Gaps = 28/214 (13%)
Query: 81 PDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGA 140
PD+ Y++MI + ++ + +M+ + PN + + LI+ R +
Sbjct: 608 PDVYTYSVMIDGCCKAERTEE-----GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 141 SGEIVHAQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPV----TDVVTWNSMV 196
+ + G + SLI + A+ LF+E+ + +V + +++
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 197 IGYLRNGGLDNALDLFRKMNGKNI----ISWNSIITGLVQGGLAKEALELFHEMQQISVK 252
GY + G + L R+M+ KN+ I++ +I G + G EA L +EM++ +
Sbjct: 723 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Query: 253 PDKITIASVLSACAQLGAIDHGKWVHSYLRRNGI 286
PD IT + ++++ YL++ G+
Sbjct: 783 PDSIT---------------YKEFIYGYLKQGGV 801
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/482 (21%), Positives = 208/482 (43%), Gaps = 53/482 (10%)
Query: 50 YHLITRLLFSCSFSKYGSFTYATNVFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMV 109
+H + RL SC YG+ + + PD R++N +I + V D+ +
Sbjct: 61 FHTLFRLYLSCE-RLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQ----VSL 115
Query: 110 LYKKMLCDGIFPNCLTFPFLIKG----------------------CTRWMDGASGEIVH- 146
+Y KM+ G+ P+ LI + SG H
Sbjct: 116 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHG 175
Query: 147 ---------AQVVKFGFLSDVFNGNSLINLYMTCGLLSNARKLFDEIPVTDVVTWNSMVI 197
+++VK G L D + N+LI+ + G A+ L DEI +++T ++
Sbjct: 176 LADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLS 235
Query: 198 GYLRNGGLDNAL-DLFRKMNGKNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKI 256
Y ++ A D+ ++++++SII L +GG E L EM+++SV P+ +
Sbjct: 236 SYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHV 295
Query: 257 TIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEM 316
T +++ + + H ++S + GI D+V+ T L++ K G +++A + F+ +
Sbjct: 296 TYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKML 355
Query: 317 PEK----DTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLV 372
E + +TA++ G A +M V PN VT+ +++ G++
Sbjct: 356 LEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGML 415
Query: 373 EQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVILIRSMPM---EPDVYVWGA 429
E+ M+ ++ P + Y ++D L +A + ++ L + M + E + Y+ A
Sbjct: 416 EEAVSLLRKMEDQNVV-PNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDA 474
Query: 430 LLGGCQMHGNVE----LGEKVALHLIDLEPHNHAFYMNLCDIYGKAGRFDAAKRIRNLLK 485
L+ + G ++ L + + + L+ N Y +L D++ K G +AA ++
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDQIN---YTSLIDVFFKGGDEEAALAWAEEMQ 531
Query: 486 ER 487
ER
Sbjct: 532 ER 533
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 106/236 (44%), Gaps = 12/236 (5%)
Query: 106 RAMVLYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLI 165
A+ + +M+ I PN T+ + ++ + H ++ +G N+LI
Sbjct: 626 EAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLI 685
Query: 166 NLYMTCGLLSNARKLFDEIP----VTDVVTWNSMVIGYLRNGGLDNALDLFRKMN----G 217
G+ A + ++ + D VT+NS++ GY + AL + M
Sbjct: 686 ATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGIS 745
Query: 218 KNIISWNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWV 277
N+ ++N+II GL GL KE + EM+ ++PD T +++S A++G + +
Sbjct: 746 PNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTI 805
Query: 278 HSYLRRNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMIS 329
+ + +G+ L++ + G + QA E+ +EM ++ +TS + MIS
Sbjct: 806 YCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMIS 861
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/405 (19%), Positives = 161/405 (39%), Gaps = 50/405 (12%)
Query: 110 LYKKMLCDGIFPNCLTFPFLIKGCTRWMDGASGEIVHAQVVKFGFLSDVFNGNSLINLYM 169
L K M+ G+ + + + LI + D + ++ + G DV + N LI+ +
Sbjct: 491 LVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGML 550
Query: 170 TCGLLSN--ARKLFDEIPV-TDVVTWNSMVIGYLRNGGLDNALDLFRKMNG----KNIIS 222
G + A K E + D+ T+N M+ + G + L L+ KM +++S
Sbjct: 551 KFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMS 610
Query: 223 WNSIITGLVQGGLAKEALELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLR 282
N ++ L + G +EA+ + ++M + + P+ T L ++ D H L
Sbjct: 611 CNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLL 670
Query: 283 RNGIECDVVIGTALVNMYGKCGLVQQAFEIFEEMPEK----DTSAWTAMISVFALHGLGW 338
GI+ + L+ K G+ ++A + +M + DT + +++ + +
Sbjct: 671 SYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVR 730
Query: 339 KAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQ-GRWCFDVMKRVYLIEPQVYHYAC 397
KA + M AG+ PN T+ ++ + +GL+++ +W +
Sbjct: 731 KALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSE----------------- 773
Query: 398 MVDLLSRARLFDESVILIRSMPMEPDVYVWGALLGGCQMHGNVELGEKVALHLI--DLEP 455
++S M PD + + AL+ G GN++ + +I L P
Sbjct: 774 -----------------MKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVP 816
Query: 456 HNHAFYMNLCDIYGKAGRFDAAKRIRNLLKERRVQKKIPG-CSMI 499
+ + L + G+ A+ + + +R V C+MI
Sbjct: 817 KTSTYNV-LISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMI 860
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 164/387 (42%), Gaps = 36/387 (9%)
Query: 74 VFHMINNPDLRVYNIMIRAYAGMDGVDDRHFCRAMVLYKKMLCDGIFPNCLTFPFLIKG- 132
+ PD+ YN +I + M+ +DD A + +M P+ +T+ +I
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDD-----ATRVLDRMRSKDFSPDTVTYNIMIGSL 203
Query: 133 CTRWMDGASGEIVHAQVVKFGFLSD-----VFNGNSLINLYMTCGLLSNARKLFDEIPV- 186
C+R G++ A V LSD V LI M G + A KL DE+
Sbjct: 204 CSR------GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 257
Query: 187 ---TDVVTWNSMVIGYLRNGGLDNALDLFRKMNGK----NIISWNSIITGLVQGGLAKEA 239
D+ T+N+++ G + G +D A ++ R + K ++IS+N ++ L+ G +E
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG 317
Query: 240 LELFHEMQQISVKPDKITIASVLSACAQLGAIDHGKWVHSYLRRNGIECDVVIGTALVNM 299
+L +M P+ +T + +++ + G I+ + ++ G+ D L+
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 300 YGKCGLVQQAFEIFEEMPE----KDTSAWTAMISVFALHGLGWKAFDCFLEMERAGVKPN 355
+ + G + A E E M D + +++ +G +A + F ++ G PN
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437
Query: 356 HVTFVGLLSACAHSG-LVEQGRWCFDVMKRVYLIEPQVYHYACMVDLLSRARLFDESVIL 414
++ + SA SG + ++M I+P Y M+ L R + DE+ L
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEMMSNG--IDPDEITYNSMISCLCREGMVDEAFEL 495
Query: 415 I---RSMPMEPDVYVWG-ALLGGCQMH 437
+ RS P V + LLG C+ H
Sbjct: 496 LVDMRSCEFHPSVVTYNIVLLGFCKAH 522