Miyakogusa Predicted Gene
- Lj1g3v3768350.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3768350.1 tr|G7ILV8|G7ILV8_MEDTR Bromodomain-containing
factor OS=Medicago truncatula GN=MTR_2g018270 PE=4
SV=,40,0.000000000000001,Bromodomain,Bromodomain; seg,NULL; no
description,Bromodomain; BROMODOMAIN,Bromodomain;
BROMODOMAIN_,CUFF.31235.1
(692 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G27260.1 | Symbols: GTE8 | global transcription factor group ... 407 e-113
AT3G27260.2 | Symbols: GTE8 | global transcription factor group ... 367 e-101
AT5G14270.1 | Symbols: ATBET9, BET9 | bromodomain and extratermi... 347 2e-95
AT5G14270.2 | Symbols: BET9 | bromodomain and extraterminal doma... 346 3e-95
AT3G01770.1 | Symbols: ATBET10, BET10 | bromodomain and extrater... 321 1e-87
AT5G63320.1 | Symbols: NPX1 | nuclear protein X1 | chr5:25374413... 263 3e-70
AT5G63320.3 | Symbols: NPX1 | nuclear protein X1 | chr5:25377180... 262 6e-70
AT5G63320.2 | Symbols: NPX1 | nuclear protein X1 | chr5:25377180... 262 6e-70
AT1G73150.1 | Symbols: GTE3 | global transcription factor group ... 145 6e-35
AT1G06230.3 | Symbols: GTE4 | global transcription factor group ... 145 8e-35
AT1G06230.2 | Symbols: GTE4 | global transcription factor group ... 145 8e-35
AT1G06230.1 | Symbols: GTE4 | global transcription factor group ... 145 8e-35
AT1G17790.1 | Symbols: | DNA-binding bromodomain-containing pro... 144 2e-34
AT5G46550.1 | Symbols: | DNA-binding bromodomain-containing pro... 135 8e-32
AT5G65630.1 | Symbols: GTE7 | global transcription factor group ... 132 7e-31
AT5G10550.1 | Symbols: GTE2 | global transcription factor group ... 130 3e-30
AT2G34900.1 | Symbols: GTE01, IMB1, GTE1 | Transcription factor ... 103 4e-22
AT2G34900.2 | Symbols: IMB1 | Transcription factor GTE6 | chr2:1... 101 2e-21
AT3G52280.1 | Symbols: GTE6 | general transcription factor group... 82 9e-16
AT3G52280.2 | Symbols: GTE6 | general transcription factor group... 82 1e-15
AT5G55040.2 | Symbols: | DNA-binding bromodomain-containing pro... 64 4e-10
AT5G55040.1 | Symbols: | DNA-binding bromodomain-containing pro... 64 4e-10
AT1G58025.1 | Symbols: | DNA-binding bromodomain-containing pro... 62 1e-09
AT1G58025.3 | Symbols: | DNA-binding bromodomain-containing pro... 62 1e-09
AT1G58025.2 | Symbols: | DNA-binding bromodomain-containing pro... 62 1e-09
AT3G54610.1 | Symbols: HAT1, GCN5, HAG1, HAC3, HAG01, BGT | hist... 60 5e-09
AT1G20670.1 | Symbols: | DNA-binding bromodomain-containing pro... 60 7e-09
AT1G76380.1 | Symbols: | DNA-binding bromodomain-containing pro... 55 2e-07
AT1G76380.2 | Symbols: | DNA-binding bromodomain-containing pro... 55 2e-07
AT1G76380.3 | Symbols: | DNA-binding bromodomain-containing pro... 54 4e-07
>AT3G27260.1 | Symbols: GTE8 | global transcription factor group E8
| chr3:10068411-10072403 FORWARD LENGTH=813
Length = 813
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 251/568 (44%), Positives = 323/568 (56%), Gaps = 44/568 (7%)
Query: 8 GGYSGNAVETASESDGSGVSGRMDADSTVLEDSSMPVRKCTGLNSSRRDAFRVPVQVIPM 67
GGY N E ES+GSG S ++D + T E+SS P RKC LNS+ D + V QVI +
Sbjct: 9 GGYYRNTFEAPEESEGSGSSAQIDTEVTASENSSTPARKCIMLNSNDEDPYGVQRQVISL 68
Query: 68 SNLSEIKRKGLVRRLKSELEQIRLIQKKVEVRKTNGAMLSPSSVIQSFSNGHNNGPWTEN 127
N+S+ +RK L+ RLK ELEQ +++ K E+++ N A +S +S FS G N
Sbjct: 69 YNMSQSERKDLIYRLKLELEQTKIVLKNAELQRMNPAAVSSTSDRVGFSTGQKISSRVSN 128
Query: 128 PREPSISNSVPGNGLKPSGQSQKPRGWNRGSAEKFXXXXXXXXXXXXXXLLMKDCEPLLK 187
++PS + G+G K Q+ RGWNRG++ KF L MK C+ LL+
Sbjct: 129 SKKPS--DFAVGSGKKVRHQNGTSRGWNRGTSGKFESSKETMTSTPNITL-MKQCDTLLR 185
Query: 188 RLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKLAKGVYRDPLEFAGDVRLT 247
+L +H +WVF+ PVDVVKLN+PDY + IKHPMDLGTVK LA GVY P EFA DVRLT
Sbjct: 186 KLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSPHEFAADVRLT 245
Query: 248 FSNAMTYNPRGNDVHIMADTLSKYFEVRWKSIEKKLPRKDAQRLPTKPAT-SDDVETIRP 306
F+NAMTYNP G+DVHIM D LSK FE RWK+I+KKLP Q LP +D+ +
Sbjct: 246 FTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKLPPCSMQTLPAVTLEPNDERKAAIS 305
Query: 307 VPPSKKRKLISLSPQPEVMP-PAKQVMSDQEKXXXXXXXXXXXXXXPVHIIDFLKEHCSN 365
VPP+KKRK+ S P E +P P K +M++ E+ P HIIDFLK+H SN
Sbjct: 306 VPPAKKRKMAS--PVRESVPEPVKPLMTEVERHRLGRQLESLLDELPAHIIDFLKKHNSN 363
Query: 366 GGECAXXXXXXXXXXLSNDTLFTLRKLLDDFKQEKQKDKAKVEACEIELLNDSGPSNSSM 425
GGE A LS++ L TLR LLD++ Q K+ + VE CEIEL+N S PSNSS+
Sbjct: 364 GGEIAEDEIEIDIDVLSDEVLVTLRNLLDEYIQNKEAKQTNVEPCEIELINGSRPSNSSL 423
Query: 426 QAFKGNDSADEEDIGRNEPPV---------------------------SRYPA---AETE 455
Q +GN+ ADE G NEPP+ S+ P +E +
Sbjct: 424 Q--RGNEMADEYVDG-NEPPISRSSSDSDSGSSEDQSDDAKPMVQGDSSKMPETANSEAQ 480
Query: 456 KDKTYKMDKHXXXXXXXXXXDLNKLKDDSQQKLSSFNSDCYEDGECAPTERQIPDKLYRA 515
+D+ ++D L ++ SQQKLSS SD +G T +K YRA
Sbjct: 481 RDENTRIDDLFVGSQSTGA--LEQMDICSQQKLSSDESDGQHEGNILETPAS-SEKRYRA 537
Query: 516 ALLKNRFADTILKAREKTLAHVE-KGDP 542
ALLKNRFAD ILKAREK L KGDP
Sbjct: 538 ALLKNRFADIILKAREKPLPQNGIKGDP 565
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 46/60 (76%)
Query: 606 TVEINENSRILKDLEMLRAVPGEQLPSSIYETSPDQSQDAVDCFTFDGSNPLEQLGLYIK 665
TVEINENSR L+DLEML + EQLPSS ETSP++ DA+ F GSNPLEQLGLY+K
Sbjct: 633 TVEINENSRFLEDLEMLSSSAPEQLPSSAEETSPERPLDALGSFNLRGSNPLEQLGLYMK 692
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 636 ETSPDQSQDAVDCFTFDGSNPLEQLGLYIKXXXXXXXXXXPQCAPNPLSDVEEGEID 692
ETS ++ DA F GSNPLEQLGLY+K P PN +DVEEGEID
Sbjct: 758 ETSLERPVDAFGSFNLKGSNPLEQLGLYMKQDDDEEEPEAP-AVPNLANDVEEGEID 813
>AT3G27260.2 | Symbols: GTE8 | global transcription factor group E8
| chr3:10068558-10072403 FORWARD LENGTH=764
Length = 764
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 231/526 (43%), Positives = 298/526 (56%), Gaps = 44/526 (8%)
Query: 50 LNSSRRDAFRVPVQVIPMSNLSEIKRKGLVRRLKSELEQIRLIQKKVEVRKTNGAMLSPS 109
LNS+ D + V QVI + N+S+ +RK L+ RLK ELEQ +++ K E+++ N A +S +
Sbjct: 2 LNSNDEDPYGVQRQVISLYNMSQSERKDLIYRLKLELEQTKIVLKNAELQRMNPAAVSST 61
Query: 110 SVIQSFSNGHNNGPWTENPREPSISNSVPGNGLKPSGQSQKPRGWNRGSAEKFXXXXXXX 169
S FS G N ++PS + G+G K Q+ RGWNRG++ KF
Sbjct: 62 SDRVGFSTGQKISSRVSNSKKPS--DFAVGSGKKVRHQNGTSRGWNRGTSGKFESSKETM 119
Query: 170 XXXXXXXLLMKDCEPLLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKL 229
L MK C+ LL++L +H +WVF+ PVDVVKLN+PDY + IKHPMDLGTVK L
Sbjct: 120 TSTPNITL-MKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNL 178
Query: 230 AKGVYRDPLEFAGDVRLTFSNAMTYNPRGNDVHIMADTLSKYFEVRWKSIEKKLPRKDAQ 289
A GVY P EFA DVRLTF+NAMTYNP G+DVHIM D LSK FE RWK+I+KKLP Q
Sbjct: 179 ASGVYSSPHEFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKLPPCSMQ 238
Query: 290 RLPTKPAT-SDDVETIRPVPPSKKRKLISLSPQPEVMP-PAKQVMSDQEKXXXXXXXXXX 347
LP +D+ + VPP+KKRK+ S P E +P P K +M++ E+
Sbjct: 239 TLPAVTLEPNDERKAAISVPPAKKRKMAS--PVRESVPEPVKPLMTEVERHRLGRQLESL 296
Query: 348 XXXXPVHIIDFLKEHCSNGGECAXXXXXXXXXXLSNDTLFTLRKLLDDFKQEKQKDKAKV 407
P HIIDFLK+H SNGGE A LS++ L TLR LLD++ Q K+ + V
Sbjct: 297 LDELPAHIIDFLKKHNSNGGEIAEDEIEIDIDVLSDEVLVTLRNLLDEYIQNKEAKQTNV 356
Query: 408 EACEIELLNDSGPSNSSMQAFKGNDSADEEDIGRNEPPV--------------------- 446
E CEIEL+N S PSNSS+Q +GN+ ADE G NEPP+
Sbjct: 357 EPCEIELINGSRPSNSSLQ--RGNEMADEYVDG-NEPPISRSSSDSDSGSSEDQSDDAKP 413
Query: 447 ------SRYPA---AETEKDKTYKMDKHXXXXXXXXXXDLNKLKDDSQQKLSSFNSDCYE 497
S+ P +E ++D+ ++D L ++ SQQKLSS SD
Sbjct: 414 MVQGDSSKMPETANSEAQRDENTRIDDLFVGSQSTGA--LEQMDICSQQKLSSDESDGQH 471
Query: 498 DGECAPTERQIPDKLYRAALLKNRFADTILKAREKTLAHVE-KGDP 542
+G T +K YRAALLKNRFAD ILKAREK L KGDP
Sbjct: 472 EGNILETPAS-SEKRYRAALLKNRFADIILKAREKPLPQNGIKGDP 516
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 46/60 (76%)
Query: 606 TVEINENSRILKDLEMLRAVPGEQLPSSIYETSPDQSQDAVDCFTFDGSNPLEQLGLYIK 665
TVEINENSR L+DLEML + EQLPSS ETSP++ DA+ F GSNPLEQLGLY+K
Sbjct: 584 TVEINENSRFLEDLEMLSSSAPEQLPSSAEETSPERPLDALGSFNLRGSNPLEQLGLYMK 643
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 636 ETSPDQSQDAVDCFTFDGSNPLEQLGLYIKXXXXXXXXXXPQCAPNPLSDVEEGEID 692
ETS ++ DA F GSNPLEQLGLY+K P PN +DVEEGEID
Sbjct: 709 ETSLERPVDAFGSFNLKGSNPLEQLGLYMKQDDDEEEPEAP-AVPNLANDVEEGEID 764
>AT5G14270.1 | Symbols: ATBET9, BET9 | bromodomain and extraterminal
domain protein 9 | chr5:4605173-4608517 FORWARD
LENGTH=688
Length = 688
Score = 347 bits (890), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 222/542 (40%), Positives = 284/542 (52%), Gaps = 77/542 (14%)
Query: 45 RKCTGLNSSRR---DAFRVPVQVIPMSNLSEIKRKGLVRRLKSELEQIRLIQKKVEVRKT 101
R G N S+R + F V V+P+S LS RK L+RRL+ ELEQIR+ QK E+ +T
Sbjct: 29 RVSEGSNCSKRKVGETFGVSKMVLPLSGLSSSDRKELIRRLRQELEQIRVFQKNFELSRT 88
Query: 102 NGAMLSPSS---VIQSFSNGHNNGPWTENPREPSISNSVPGNGLKPSGQSQKPRGWNRGS 158
S +S ++SF S ++ PG + P + KP
Sbjct: 89 VALTSSSASGLTRVKSFGM--------------SRCSTGPGKTVNPISAASKP------- 127
Query: 159 AEKFXXXXXXXXXXXXXXLLMKDCEPLLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKH 218
LLMK CE LLKRLM+HQ+ WVF TPVDVVKLN+ DYF+VI+H
Sbjct: 128 ----------TPVTTAVMLLMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEH 177
Query: 219 PMDLGTVKTKLAKGVYRDPLEFAGDVRLTFSNAMTYNPRGNDVHIMADTLSKYFEVRWKS 278
PMDLGTVK KL G Y P EFA DVRLTFSNAMTYNP GNDV++MADTL K+FEVRWK+
Sbjct: 178 PMDLGTVKNKLTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKT 237
Query: 279 IEKKLPRKDAQRLPTKPATSDDVETIRPVPPSKKRKLISLSPQPEVMPPAKQVMSDQEKX 338
+EKKL P+ + + PVP +KKRK ++ + V+ PAK+VM+D+++
Sbjct: 238 LEKKLSGTKVHTEPSNLDAHKEKHIVIPVPMAKKRKTTAVDCE-NVVDPAKRVMTDEDR- 295
Query: 339 XXXXXXXXXXXXXPVHIIDFLKEHCSNGGECAXXXXXXXXXXLSNDTLFTLRKLLDDFKQ 398
P +I+FL++H SN G LS+ LF LR LLD+ +
Sbjct: 296 LKLGKDLESLTEFPAQLINFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLRDLLDEHLR 355
Query: 399 EKQKDKAKVEACEIELLNDSGPSNSSMQAFKGNDSADE-EDIGRNEPPVSRYPAAETEKD 457
E Q K+ VE CEIELL+ S P NSSMQ G++ DE DIG NE P S EKD
Sbjct: 356 EIQNKKSSVEPCEIELLHGSVPGNSSMQHCDGSELDDEVVDIGENEHPTSSISPVTIEKD 415
Query: 458 KTY---------------KMDKHXXXXXXXXXXD---------------------LNKLK 481
KM D L++L+
Sbjct: 416 LVLGNSNGNSLGSVSGDPKMSSLPRASKGLGTIDLEPMLDGATSASPTRGSSVGGLDQLE 475
Query: 482 DDSQQKLSSFNSDCYEDGECAPTERQI-PDKLYRAALLKNRFADTILKAREKTLAHVEKG 540
S +K+SS +DC +DG A E+Q+ P+K YRAA+LKNRFAD ILKAREK L +
Sbjct: 476 SASPEKISSVEADCQQDGNSAQNEKQLPPEKSYRAAILKNRFADIILKAREKPLNQNDTR 535
Query: 541 DP 542
DP
Sbjct: 536 DP 537
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 606 TVEINENSRILKDLEMLRAVPGEQLPSSIYETSPDQSQDAVDCFTFDGSNPLEQLGLYIK 665
+VE+NEN++ L+DLE+L+ V + L ++I E D + F+F GSNPLEQLGL++K
Sbjct: 605 SVELNENAKFLEDLELLKTVDTDHLTNTIEEE--DGPDVGLRSFSFGGSNPLEQLGLFMK 662
Query: 666 XXXXXXXXXXPQCAPNPLSDVEEGEID 692
P +P P D+EEGEID
Sbjct: 663 -QDEDEEEADPLTSPAPEIDIEEGEID 688
>AT5G14270.2 | Symbols: BET9 | bromodomain and extraterminal domain
protein 9 | chr5:4605173-4608517 FORWARD LENGTH=689
Length = 689
Score = 346 bits (887), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 222/543 (40%), Positives = 284/543 (52%), Gaps = 78/543 (14%)
Query: 45 RKCTGLNSSRR---DAFRVPVQVIPMSNLSEIKRKGLVRRLKSELEQIRLIQKKVEVRKT 101
R G N S+R + F V V+P+S LS RK L+RRL+ ELEQIR+ QK E+ +T
Sbjct: 29 RVSEGSNCSKRKVGETFGVSKMVLPLSGLSSSDRKELIRRLRQELEQIRVFQKNFELSRT 88
Query: 102 NGAMLSPSS---VIQSFSNGHNNGPWTENPREPSISNSVPGNGLKPSGQSQKPRGWNRGS 158
S +S ++SF S ++ PG + P + KP
Sbjct: 89 VALTSSSASGLTRVKSFGM--------------SRCSTGPGKTVNPISAASKP------- 127
Query: 159 AEKFXXXXXXXXXXXXXXLLMKDCEPLLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKH 218
LLMK CE LLKRLM+HQ+ WVF TPVDVVKLN+ DYF+VI+H
Sbjct: 128 ----------TPVTTAVMLLMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEH 177
Query: 219 PMDLGTVKTKLAKGVYRDPLEFAGDVRLTFSNAMTYNPRGNDVHIMADTLSKYFEVRWKS 278
PMDLGTVK KL G Y P EFA DVRLTFSNAMTYNP GNDV++MADTL K+FEVRWK+
Sbjct: 178 PMDLGTVKNKLTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKT 237
Query: 279 IEKKLPRKDAQRLPTKPATSDDVETIRPVPPSKKRKLISLSPQPEVMPPAKQVMSDQEKX 338
+EKKL P+ + + PVP +KKRK ++ + V+ PAK+VM+D+++
Sbjct: 238 LEKKLSGTKVHTEPSNLDAHKEKHIVIPVPMAKKRKTTAVDCE-NVVDPAKRVMTDEDR- 295
Query: 339 XXXXXXXXXXXXXPVHIIDFLKEHCSNGGECAXXXXXXXXXXLSNDTLFTLRKLLDDFKQ 398
P +I+FL++H SN G LS+ LF LR LLD+ +
Sbjct: 296 LKLGKDLESLTEFPAQLINFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLRDLLDEHLR 355
Query: 399 EKQKDKAKVEACEIELLNDSGPSNSSMQAFKGNDSADE-EDIGRNEPPVSRYPAAETEKD 457
E Q K+ VE CEIELL+ S P NSSMQ G++ DE DIG NE P S EKD
Sbjct: 356 EIQNKKSSVEPCEIELLHGSVPGNSSMQHCDGSELDDEVVDIGENEHPTSSISPVTIEKD 415
Query: 458 KTY---------------KMDKHXXXXXXXXXXD----------------------LNKL 480
KM D L++L
Sbjct: 416 LVLGNSNGNSLGSVSGDPKMSSLPRASKGLGTIDLEPMLDGATSASPTRGLASVGGLDQL 475
Query: 481 KDDSQQKLSSFNSDCYEDGECAPTERQI-PDKLYRAALLKNRFADTILKAREKTLAHVEK 539
+ S +K+SS +DC +DG A E+Q+ P+K YRAA+LKNRFAD ILKAREK L +
Sbjct: 476 ESASPEKISSVEADCQQDGNSAQNEKQLPPEKSYRAAILKNRFADIILKAREKPLNQNDT 535
Query: 540 GDP 542
DP
Sbjct: 536 RDP 538
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 606 TVEINENSRILKDLEMLRAVPGEQLPSSIYETSPDQSQDAVDCFTFDGSNPLEQLGLYIK 665
+VE+NEN++ L+DLE+L+ V + L ++I E D + F+F GSNPLEQLGL++K
Sbjct: 606 SVELNENAKFLEDLELLKTVDTDHLTNTIEEE--DGPDVGLRSFSFGGSNPLEQLGLFMK 663
Query: 666 XXXXXXXXXXPQCAPNPLSDVEEGEID 692
P +P P D+EEGEID
Sbjct: 664 -QDEDEEEADPLTSPAPEIDIEEGEID 689
>AT3G01770.1 | Symbols: ATBET10, BET10 | bromodomain and
extraterminal domain protein 10 | chr3:275582-278386
REVERSE LENGTH=620
Length = 620
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 206/496 (41%), Positives = 279/496 (56%), Gaps = 50/496 (10%)
Query: 51 NSSRRD-AFRVPVQVIPMSNLSEIKRKGLVRRLKSELEQIRLIQKKVEVRKTNGAMLSPS 109
N+S+ D F VP V+P+S+LS +R+ + L+ ELEQ+R QK V G +L S
Sbjct: 28 NASKDDETFGVPRIVLPLSDLSSSERRKWIHTLRQELEQLRSFQKSV------GDLLPIS 81
Query: 110 SVIQSFSNGHNNGPWTENPREPSISNSVPGNGLKPSGQSQKPRGWNRGSAEKFXXXXXXX 169
++ S + + P + S ++ PG + P + KP +
Sbjct: 82 KIVTSTPASNVSRPKSFGM---SRCSTGPGKRVLPF-TATKPEPVTTSTM---------- 127
Query: 170 XXXXXXXLLMKDCEPLLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKL 229
L MK CE LLKRLM+ Q W+F TPVDVVKLN+PDYF++IKHPMDLGTVK+KL
Sbjct: 128 -------LRMKQCESLLKRLMSQQHCWLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKL 180
Query: 230 AKGVYRDPLEFAGDVRLTFSNAMTYNPRGNDVHIMADTLSKYFEVRWKSIEKKLPRKDAQ 289
G Y P EF+ DVRLTF NAMTYNP N+V+ ADTLSK+FEVRWK+IEKK ++
Sbjct: 181 TSGTYSSPSEFSADVRLTFRNAMTYNPSDNNVYRFADTLSKFFEVRWKTIEKKSSGTKSE 240
Query: 290 RLPTKPATSDDVETIRPVPPSKKRKLISLSPQPEVMPPAKQVMSDQEKXXXXXXXXXXXX 349
P+ AT + P P +KKRK+ ++ + ++ PAK+VM+D+++
Sbjct: 241 --PSNLATLAHKDIAIPEPVAKKRKMNAVK-RNSLLEPAKRVMTDEDR-VKLGRDLGSLT 296
Query: 350 XXPVHIIDFLKEHCSNGGECAXXXXXXXXXXLSNDTLFTLRKLLDDFKQEKQKDKAKVEA 409
PV II+FL++H S LS+D LF LR L D+F +E QK + E
Sbjct: 297 EFPVQIINFLRDHSSKEERSGDDEIEIDINDLSHDALFQLRDLFDEFLRENQKKDSNGEP 356
Query: 410 CEIELLNDSGPSNSSMQAFKGNDSADEE-DIGRNEPPVSRYPAAETEKDKTYKMDKHXXX 468
C +ELL+ SGP NS Q G++ DE+ DIG E P+S TEKD
Sbjct: 357 CVLELLHGSGPGNSLTQHCDGSELEDEDVDIGNYEHPISHISTVRTEKDSV--------- 407
Query: 469 XXXXXXXDLNKLKDDSQQKLSSF-NSDCYEDGECAPTERQI-PDKLYRAALLKNRFADTI 526
LN+++D S+ KLS +D ++DG AP E+++ P+K YRAALLKNRFAD I
Sbjct: 408 ------GGLNQMEDASRGKLSLIEGADGHQDGNSAPKEKELPPEKRYRAALLKNRFADII 461
Query: 527 LKAREKTLAHVEKGDP 542
LKA+E TL EK DP
Sbjct: 462 LKAQEITLNQNEKRDP 477
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Query: 606 TVEINENSRILKDLEMLRAVPGEQLPSSIYETSPDQSQDAVDCFTFDGSNPLEQLGLYIK 665
+VEINEN+R LKDLE+L+ V +QL ++ + + D + F F GSNPLEQLGL++K
Sbjct: 538 SVEINENTRFLKDLELLKTVNTDQL-RNLRDVGSE--SDGLAVFGFGGSNPLEQLGLFMK 594
Query: 666 XXXXXXXXXXPQCAPNPLSDVEEGEID 692
P+P ++VEEGEID
Sbjct: 595 HEEDEDESDM-LAFPDPGNEVEEGEID 620
>AT5G63320.1 | Symbols: NPX1 | nuclear protein X1 |
chr5:25374413-25378783 REVERSE LENGTH=1061
Length = 1061
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 163/419 (38%), Positives = 233/419 (55%), Gaps = 27/419 (6%)
Query: 45 RKCTGLNSSRRDAFRVPVQVIPMSNLSEIKRKGLVRRLKSELEQIRLIQKKVEVRKTNGA 104
R+ GLN D V +V+ +S +S +RK LV +LK EL+Q+R + KK+ ++
Sbjct: 44 RRRFGLNG---DNNGVSKEVLSLSKMSRSERKNLVHKLKMELQQVRDLSKKIASFSSDTV 100
Query: 105 MLSPSSVIQSFSNGHNNGPWTENPREP---SISNSVPGNGLK-PSGQSQKPRGWNRGSAE 160
+LSP +N+ ++ PR P + + V G K P +S K R N+
Sbjct: 101 LLSP----------YNDHSCSDGPRRPPPENFATFVGSQGKKRPPVRSDKQR--NKKGPS 148
Query: 161 KFXXXXXXXXXXXXXXLLMKDCEPLLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPM 220
+ +MK+CE LL RL +H+ W F+TPVD V LN+PDYF+VIKHPM
Sbjct: 149 RLNVPTSYTVAS-----VMKECETLLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPM 203
Query: 221 DLGTVKTKLAKGVYRDPLEFAGDVRLTFSNAMTYNPRGNDVHIMADTLSKYFEVRWKSIE 280
DLGT++++L KG Y PL+FA DVRLTFSN++ YNP GN H MA +SKYFE WKSIE
Sbjct: 204 DLGTIRSRLCKGEYSSPLDFAADVRLTFSNSIAYNPPGNQFHTMAQGISKYFESGWKSIE 263
Query: 281 KKLPRKDAQRLPTKPATSDDVETIRPVPPSKKRKLISLSPQPEVMPPAKQVMSDQEKXXX 340
KK+P +P + S + E V P +K++ +++ + PAK VM+D EK
Sbjct: 264 KKIPMSKPPVIPLTSSASLESEIPFEVAPMRKKE-AAMNDNKLRVEPAKLVMTDGEKKKL 322
Query: 341 XXXXXXXXXXXPVHIIDFLKEHCSNGGECAXXXXXXXXXXLSNDTLFTLRKLLDDFKQEK 400
P I D L+E + G+ LS++ LF +RKLLDD+ +EK
Sbjct: 323 GQDLMALEEDFPQKIADLLREQSGSDGQSGEGEIEIDIEALSDEILFMVRKLLDDYLREK 382
Query: 401 QKDKAKVEACEIELLNDSGPSNSSMQAFKGNDSADE--EDIGRNEPPVSRYPAAETEKD 457
+K K E CE+E+++DSG SNS +Q KG+ DE + +G N+P VS +P + EKD
Sbjct: 383 KKSMEKSEPCEMEIVHDSGFSNSPLQPSKGDLQIDEDVDIVGGNDPSVSSHPPLKIEKD 441
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 78/177 (44%), Gaps = 9/177 (5%)
Query: 498 DGECAPTERQI----PDKLYRAALLKNRFADTILKAREKTLAHVEKGDPXXXXXXXXXXX 553
D E AP ERQI PDK YRAA LKNRFADTI+KAREK EKGDP
Sbjct: 540 DEETAPPERQISPDSPDKRYRAAFLKNRFADTIMKAREKAFTKGEKGDPEKLRIEREEFE 599
Query: 554 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVEINENS 613
TVEINE
Sbjct: 600 KRLREEKERLQAEAKAAEEARRKAKAEAAEKARREREQEREAARQALQKMEKTVEINEGI 659
Query: 614 RILKDLEMLRA--VPGEQLPSSIYETSPDQSQDAVDCFTF---DGSNPLEQLGLYIK 665
R ++DL+MLRA G+QLP+S+ SP S+D + +F SNPLE LGLY+K
Sbjct: 660 RFMEDLQMLRATGTEGDQLPTSMEVMSPKFSEDMLGLGSFKMESNSNPLEHLGLYMK 716
>AT5G63320.3 | Symbols: NPX1 | nuclear protein X1 |
chr5:25377180-25378783 REVERSE LENGTH=477
Length = 477
Score = 262 bits (670), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 163/419 (38%), Positives = 233/419 (55%), Gaps = 27/419 (6%)
Query: 45 RKCTGLNSSRRDAFRVPVQVIPMSNLSEIKRKGLVRRLKSELEQIRLIQKKVEVRKTNGA 104
R+ GLN D V +V+ +S +S +RK LV +LK EL+Q+R + KK+ ++
Sbjct: 44 RRRFGLNG---DNNGVSKEVLSLSKMSRSERKNLVHKLKMELQQVRDLSKKIASFSSDTV 100
Query: 105 MLSPSSVIQSFSNGHNNGPWTENPREP---SISNSVPGNGLK-PSGQSQKPRGWNRGSAE 160
+LSP +N+ ++ PR P + + V G K P +S K R N+
Sbjct: 101 LLSP----------YNDHSCSDGPRRPPPENFATFVGSQGKKRPPVRSDKQR--NKKGPS 148
Query: 161 KFXXXXXXXXXXXXXXLLMKDCEPLLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPM 220
+ +MK+CE LL RL +H+ W F+TPVD V LN+PDYF+VIKHPM
Sbjct: 149 RLNVPTSYTVAS-----VMKECETLLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPM 203
Query: 221 DLGTVKTKLAKGVYRDPLEFAGDVRLTFSNAMTYNPRGNDVHIMADTLSKYFEVRWKSIE 280
DLGT++++L KG Y PL+FA DVRLTFSN++ YNP GN H MA +SKYFE WKSIE
Sbjct: 204 DLGTIRSRLCKGEYSSPLDFAADVRLTFSNSIAYNPPGNQFHTMAQGISKYFESGWKSIE 263
Query: 281 KKLPRKDAQRLPTKPATSDDVETIRPVPPSKKRKLISLSPQPEVMPPAKQVMSDQEKXXX 340
KK+P +P + S + E V P +K++ +++ + PAK VM+D EK
Sbjct: 264 KKIPMSKPPVIPLTSSASLESEIPFEVAPMRKKE-AAMNDNKLRVEPAKLVMTDGEKKKL 322
Query: 341 XXXXXXXXXXXPVHIIDFLKEHCSNGGECAXXXXXXXXXXLSNDTLFTLRKLLDDFKQEK 400
P I D L+E + G+ LS++ LF +RKLLDD+ +EK
Sbjct: 323 GQDLMALEEDFPQKIADLLREQSGSDGQSGEGEIEIDIEALSDEILFMVRKLLDDYLREK 382
Query: 401 QKDKAKVEACEIELLNDSGPSNSSMQAFKGNDSADE--EDIGRNEPPVSRYPAAETEKD 457
+K K E CE+E+++DSG SNS +Q KG+ DE + +G N+P VS +P + EKD
Sbjct: 383 KKSMEKSEPCEMEIVHDSGFSNSPLQPSKGDLQIDEDVDIVGGNDPSVSSHPPLKIEKD 441
>AT5G63320.2 | Symbols: NPX1 | nuclear protein X1 |
chr5:25377180-25378783 REVERSE LENGTH=477
Length = 477
Score = 262 bits (670), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 163/419 (38%), Positives = 233/419 (55%), Gaps = 27/419 (6%)
Query: 45 RKCTGLNSSRRDAFRVPVQVIPMSNLSEIKRKGLVRRLKSELEQIRLIQKKVEVRKTNGA 104
R+ GLN D V +V+ +S +S +RK LV +LK EL+Q+R + KK+ ++
Sbjct: 44 RRRFGLNG---DNNGVSKEVLSLSKMSRSERKNLVHKLKMELQQVRDLSKKIASFSSDTV 100
Query: 105 MLSPSSVIQSFSNGHNNGPWTENPREP---SISNSVPGNGLK-PSGQSQKPRGWNRGSAE 160
+LSP +N+ ++ PR P + + V G K P +S K R N+
Sbjct: 101 LLSP----------YNDHSCSDGPRRPPPENFATFVGSQGKKRPPVRSDKQR--NKKGPS 148
Query: 161 KFXXXXXXXXXXXXXXLLMKDCEPLLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPM 220
+ +MK+CE LL RL +H+ W F+TPVD V LN+PDYF+VIKHPM
Sbjct: 149 RLNVPTSYTVAS-----VMKECETLLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPM 203
Query: 221 DLGTVKTKLAKGVYRDPLEFAGDVRLTFSNAMTYNPRGNDVHIMADTLSKYFEVRWKSIE 280
DLGT++++L KG Y PL+FA DVRLTFSN++ YNP GN H MA +SKYFE WKSIE
Sbjct: 204 DLGTIRSRLCKGEYSSPLDFAADVRLTFSNSIAYNPPGNQFHTMAQGISKYFESGWKSIE 263
Query: 281 KKLPRKDAQRLPTKPATSDDVETIRPVPPSKKRKLISLSPQPEVMPPAKQVMSDQEKXXX 340
KK+P +P + S + E V P +K++ +++ + PAK VM+D EK
Sbjct: 264 KKIPMSKPPVIPLTSSASLESEIPFEVAPMRKKE-AAMNDNKLRVEPAKLVMTDGEKKKL 322
Query: 341 XXXXXXXXXXXPVHIIDFLKEHCSNGGECAXXXXXXXXXXLSNDTLFTLRKLLDDFKQEK 400
P I D L+E + G+ LS++ LF +RKLLDD+ +EK
Sbjct: 323 GQDLMALEEDFPQKIADLLREQSGSDGQSGEGEIEIDIEALSDEILFMVRKLLDDYLREK 382
Query: 401 QKDKAKVEACEIELLNDSGPSNSSMQAFKGNDSADE--EDIGRNEPPVSRYPAAETEKD 457
+K K E CE+E+++DSG SNS +Q KG+ DE + +G N+P VS +P + EKD
Sbjct: 383 KKSMEKSEPCEMEIVHDSGFSNSPLQPSKGDLQIDEDVDIVGGNDPSVSSHPPLKIEKD 441
>AT1G73150.1 | Symbols: GTE3 | global transcription factor group E3
| chr1:27504327-27505996 REVERSE LENGTH=461
Length = 461
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 121/216 (56%), Gaps = 44/216 (20%)
Query: 65 IPMSNLSEIKRKGLVRRLKSELEQIRLIQKKVEVRKTNGAMLSPSSVIQSFSNGHNNGPW 124
I +S++S+++ + L R+L++ELE++R + K++E G+N P
Sbjct: 50 ISLSSISKLEVRNLKRKLQAELEEVRSLIKRLE------------------PQGNNFAP- 90
Query: 125 TENPREPSISNSVPGNGLKPSGQSQKPRGWNRGSAEKFXXXXXXXXXXXXXXLLMKDCEP 184
VP LK + +K G + +A+K ++K C
Sbjct: 91 ------------VPNKKLKTANGGKKG-GVHGAAADKGTVQ------------ILKSCNN 125
Query: 185 LLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKLAKGVYRDPLEFAGDV 244
LL +LM H+ W+F TPVDVV L L DY ++IK PMDLGTVKT+L+K +Y+ PLEFA DV
Sbjct: 126 LLTKLMKHKSGWIFNTPVDVVTLGLHDYHNIIKEPMDLGTVKTRLSKSLYKSPLEFAEDV 185
Query: 245 RLTFSNAMTYNPRGNDVHIMADTLSKYFEVRWKSIE 280
RLTF+NAM YNP G+DV+ MA+ L FE +W +E
Sbjct: 186 RLTFNNAMLYNPVGHDVYHMAEILLNLFEEKWVPLE 221
>AT1G06230.3 | Symbols: GTE4 | global transcription factor group E4
| chr1:1907626-1910183 FORWARD LENGTH=766
Length = 766
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 78/109 (71%)
Query: 178 LMKDCEPLLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKLAKGVYRDP 237
+ K+C LL+RLM H+ WVF PVDV L L DY+++I+HPMDLGT+K+ L K +Y+ P
Sbjct: 421 VFKNCSALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMKNLYKSP 480
Query: 238 LEFAGDVRLTFSNAMTYNPRGNDVHIMADTLSKYFEVRWKSIEKKLPRK 286
EFA DVRLTF NAMTYNP G DVH+MA TL + FE RW IE R+
Sbjct: 481 REFAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERWAVIEADYNRE 529
>AT1G06230.2 | Symbols: GTE4 | global transcription factor group E4
| chr1:1907626-1910183 FORWARD LENGTH=766
Length = 766
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 78/109 (71%)
Query: 178 LMKDCEPLLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKLAKGVYRDP 237
+ K+C LL+RLM H+ WVF PVDV L L DY+++I+HPMDLGT+K+ L K +Y+ P
Sbjct: 421 VFKNCSALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMKNLYKSP 480
Query: 238 LEFAGDVRLTFSNAMTYNPRGNDVHIMADTLSKYFEVRWKSIEKKLPRK 286
EFA DVRLTF NAMTYNP G DVH+MA TL + FE RW IE R+
Sbjct: 481 REFAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERWAVIEADYNRE 529
>AT1G06230.1 | Symbols: GTE4 | global transcription factor group E4
| chr1:1907626-1910183 FORWARD LENGTH=766
Length = 766
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 78/109 (71%)
Query: 178 LMKDCEPLLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKLAKGVYRDP 237
+ K+C LL+RLM H+ WVF PVDV L L DY+++I+HPMDLGT+K+ L K +Y+ P
Sbjct: 421 VFKNCSALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMKNLYKSP 480
Query: 238 LEFAGDVRLTFSNAMTYNPRGNDVHIMADTLSKYFEVRWKSIEKKLPRK 286
EFA DVRLTF NAMTYNP G DVH+MA TL + FE RW IE R+
Sbjct: 481 REFAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERWAVIEADYNRE 529
>AT1G17790.1 | Symbols: | DNA-binding bromodomain-containing
protein | chr1:6125532-6127276 REVERSE LENGTH=487
Length = 487
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 129/244 (52%), Gaps = 44/244 (18%)
Query: 65 IPMSNLSEIKRKGLVRRLKSELEQIRLIQKKVEVRKTNGAMLSPSSVIQSFSNGHNNGPW 124
I +S++S+++ + L R+LKSEL+++R + K+ + G ++ S V+
Sbjct: 58 ISLSSISKLEVRNLKRKLKSELDEVRSLIKRFDPEANPGGSMAKSGVVG----------- 106
Query: 125 TENPREPSISNSVPGNGLKPSGQSQKPRGWNRGSAEKFXXXXXXXXXXXXXXLLMKDCEP 184
R + GNG G + G ++G+ + F K+C
Sbjct: 107 ----RSKKVKT---GNG----GGKKSGHGADKGTVQIF-----------------KNCNS 138
Query: 185 LLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKLAKGVYRDPLEFAGDV 244
LL +LM H+ AWVF PVD L L DY +++K PMDLGTVKTKL K +Y+ PL+FA DV
Sbjct: 139 LLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKEPMDLGTVKTKLGKSLYKSPLDFAEDV 198
Query: 245 RLTFSNAMTYNPRGNDVHIMADTLSKYFEVRWKSIEKKLPRKDAQRLPTKPATSDDVETI 304
RLTF+NA+ YNP G+DV+ A+ L FE +W SIE + + PT+ D+E
Sbjct: 199 RLTFNNAILYNPIGHDVYRFAELLLNMFEDKWVSIEMQYDNLHRKFKPTR-----DIEFP 253
Query: 305 RPVP 308
P P
Sbjct: 254 APAP 257
>AT5G46550.1 | Symbols: | DNA-binding bromodomain-containing
protein | chr5:18884439-18886503 REVERSE LENGTH=494
Length = 494
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 77/101 (76%)
Query: 182 CEPLLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKLAKGVYRDPLEFA 241
C LL+ LM H+ W+FK PVD VK+ +PDYF+VI+ PMDLGTVK+KL K VY + EFA
Sbjct: 73 CLALLRFLMEHRGGWLFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLKNVYSNADEFA 132
Query: 242 GDVRLTFSNAMTYNPRGNDVHIMADTLSKYFEVRWKSIEKK 282
DVRLTF+NAM YNP N+VH +A +++ FEVRW+S+ KK
Sbjct: 133 ADVRLTFANAMHYNPLWNEVHTIAKEINEIFEVRWESLMKK 173
>AT5G65630.1 | Symbols: GTE7 | global transcription factor group E7
| chr5:26226311-26228257 REVERSE LENGTH=590
Length = 590
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 126/232 (54%), Gaps = 38/232 (16%)
Query: 68 SNLSEIKRKGLVRRLKSELEQIRLIQKKVE--VRKTNGAMLSP------SSVIQSFSNGH 119
S L E+K+ R SEL+QIR++++++E +T P S+ + +F+
Sbjct: 78 SQLRELKK-----RFTSELKQIRILRERIESGTFETQQGYTIPEVPAVRSAPLNNFTGEK 132
Query: 120 NNGPWTENPREPSISNSVPGNGLKPSGQSQKPRGWNRGSAEKFXXXXXXXXXXXXXXLLM 179
N+ P++ +V +GLK S Q G + +EK ++
Sbjct: 133 ND----LGPKKKKQKKNV--SGLKRSNQF----GPSDPESEKLLAG------------ML 170
Query: 180 KDCEPLLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKLAKGVYRDPLE 239
C +L +LM H++AWVF TPVDVV L L DY V+K PMDLGTVK L KG Y P++
Sbjct: 171 NTCSQILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKGFYVSPID 230
Query: 240 FAGDVRLTFSNAMTYNPRGNDVHIMADTLSKYFEVRWKSIEKKLPRKDAQRL 291
FA DVRLTF NAMTYNP+G DV+ MAD L +F+ + KK +AQ+L
Sbjct: 231 FATDVRLTFDNAMTYNPKGQDVYFMADKLLDHFDGMFNPAFKKF---EAQQL 279
>AT5G10550.1 | Symbols: GTE2 | global transcription factor group E2
| chr5:3332855-3335232 REVERSE LENGTH=678
Length = 678
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 130/240 (54%), Gaps = 28/240 (11%)
Query: 78 LVRRLKSELEQIRLIQKKVEVRKTNGAMLSPS---SVIQSFSNGHNN-GPWTENPREPSI 133
L +RL SELE++R +++++E +G +S S + +SF+ N+ G ++ I
Sbjct: 160 LKKRLNSELEEVRFLRERIE----SGTFVSGSVYTTQARSFAGETNDVGVKKTKTKKKKI 215
Query: 134 SNSVPGNGLKPSGQSQKPRGWNRGSAEKFXXXXXXXXXXXXXXLLMKDCEPLLKRLMNHQ 193
G+G K S P + S ++ +M C +L +LM H+
Sbjct: 216 -----GHGQKRSN----PFATDEPSLKRHVALDLMSEKVLKS--MMTTCGQILVKLMKHK 264
Query: 194 FAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKLAKGVYRDPLEFAGDVRLTFSNAMT 253
++WVF PVDVV L L DY ++ PMDLGTVK L KG+YR P++FA DVRLTF+NAM+
Sbjct: 265 WSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKMNLEKGLYRSPIDFASDVRLTFTNAMS 324
Query: 254 YNPRGNDVHIMADTLSKYFEVRWKSIEKKLPRKDAQRLPTKPATSDDVETIRPVPPSKKR 313
YNP+G DV++MA+ L F+V W L R +AQ + ++S RP P +R
Sbjct: 325 YNPKGQDVYLMAEKLLSQFDV-W--FNPTLKRFEAQEVKVMGSSS------RPGPEDNQR 375
>AT2G34900.1 | Symbols: GTE01, IMB1, GTE1 | Transcription factor
GTE6 | chr2:14723333-14725562 REVERSE LENGTH=386
Length = 386
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 70/114 (61%)
Query: 178 LMKDCEPLLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKLAKGVYRDP 237
LM+ + +++ H++AW F PVDV L L DY+ VI+ PMDLGT+K K+ Y +
Sbjct: 110 LMRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNV 169
Query: 238 LEFAGDVRLTFSNAMTYNPRGNDVHIMADTLSKYFEVRWKSIEKKLPRKDAQRL 291
E DVRL F NAM YN DV++MA++L + FE +W I KL ++ +++
Sbjct: 170 REIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQV 223
>AT2G34900.2 | Symbols: IMB1 | Transcription factor GTE6 |
chr2:14723333-14724800 REVERSE LENGTH=276
Length = 276
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%)
Query: 179 MKDCEPLLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKLAKGVYRDPL 238
M+ + +++ H++AW F PVDV L L DY+ VI+ PMDLGT+K K+ Y +
Sbjct: 1 MRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVR 60
Query: 239 EFAGDVRLTFSNAMTYNPRGNDVHIMADTLSKYFEVRWKSIEKKLPRKDAQRL 291
E DVRL F NAM YN DV++MA++L + FE +W I KL ++ +++
Sbjct: 61 EIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQV 113
>AT3G52280.1 | Symbols: GTE6 | general transcription factor group E6
| chr3:19389103-19391289 REVERSE LENGTH=369
Length = 369
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 178 LMKDCEPLLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKL-AK-GV-Y 234
LM+ + +++ H+ AW F PV+V L L DYF VI PMD T+K ++ AK G Y
Sbjct: 94 LMRQFGTIFRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKDGTGY 153
Query: 235 RDPLEFAGDVRLTFSNAMTYNPRGNDVHIMADTLSKYFEVRW 276
+ ++ D+RL F NAM YN +DV+ MA L + FE +W
Sbjct: 154 KHVMQIYADMRLVFENAMNYNEETSDVYSMAKKLLEKFEEKW 195
>AT3G52280.2 | Symbols: GTE6 | general transcription factor group E6
| chr3:19389103-19391289 REVERSE LENGTH=386
Length = 386
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 178 LMKDCEPLLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKL-AK-GV-Y 234
LM+ + +++ H+ AW F PV+V L L DYF VI PMD T+K ++ AK G Y
Sbjct: 111 LMRQFGTIFRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKDGTGY 170
Query: 235 RDPLEFAGDVRLTFSNAMTYNPRGNDVHIMADTLSKYFEVRW 276
+ ++ D+RL F NAM YN +DV+ MA L + FE +W
Sbjct: 171 KHVMQIYADMRLVFENAMNYNEETSDVYSMAKKLLEKFEEKW 212
>AT5G55040.2 | Symbols: | DNA-binding bromodomain-containing
protein | chr5:22327727-22331703 REVERSE LENGTH=916
Length = 916
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 180 KDCEPLLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKLAKGVYRDPLE 239
K E +L +L V+ PVD +L PDY +I+HPMD TV+ KLA G Y E
Sbjct: 189 KSLELILDKLQKKDIYGVYAEPVDPEEL--PDYHDMIEHPMDFSTVRKKLANGSYSTLEE 246
Query: 240 FAGDVRLTFSNAMTYNPRGNDVHIMADTLSKYFEVRWKSIEKKLPRKD 287
DV L SNAM YN + A T+ + + +++ K+ R +
Sbjct: 247 LESDVLLICSNAMQYNSSDTVYYKQARTIQEMGKRKFEKARLKIKRAE 294
>AT5G55040.1 | Symbols: | DNA-binding bromodomain-containing
protein | chr5:22327727-22331703 REVERSE LENGTH=916
Length = 916
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 180 KDCEPLLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKLAKGVYRDPLE 239
K E +L +L V+ PVD +L PDY +I+HPMD TV+ KLA G Y E
Sbjct: 189 KSLELILDKLQKKDIYGVYAEPVDPEEL--PDYHDMIEHPMDFSTVRKKLANGSYSTLEE 246
Query: 240 FAGDVRLTFSNAMTYNPRGNDVHIMADTLSKYFEVRWKSIEKKLPRKD 287
DV L SNAM YN + A T+ + + +++ K+ R +
Sbjct: 247 LESDVLLICSNAMQYNSSDTVYYKQARTIQEMGKRKFEKARLKIKRAE 294
>AT1G58025.1 | Symbols: | DNA-binding bromodomain-containing
protein | chr1:21458219-21461757 REVERSE LENGTH=572
Length = 572
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 179 MKDCEPLLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKLAKG-VYRDP 237
++D ++K++M + A F PV+ L +PDYF +IK PMD GT+ KG Y +
Sbjct: 216 LEDSLIVIKKIMKMEAADPFNVPVNPEALGIPDYFDIIKTPMDFGTICNNFEKGNKYMNS 275
Query: 238 LEFAGDVRLTFSNAMTYNPRGNDVHIMADTLSKYFEVRWKS 278
+ DV ++N YN +G+ + + + K F W S
Sbjct: 276 EDVYKDVNYIWNNCSKYNKKGDYIVDLMKRVKKNFMKYWTS 316
>AT1G58025.3 | Symbols: | DNA-binding bromodomain-containing
protein | chr1:21458219-21461757 REVERSE LENGTH=573
Length = 573
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 179 MKDCEPLLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKLAKG-VYRDP 237
++D ++K++M + A F PV+ L +PDYF +IK PMD GT+ KG Y +
Sbjct: 216 LEDSLIVIKKIMKMEAADPFNVPVNPEALGIPDYFDIIKTPMDFGTICNNFEKGNKYMNS 275
Query: 238 LEFAGDVRLTFSNAMTYNPRGNDVHIMADTLSKYFEVRWKS 278
+ DV ++N YN +G+ + + + K F W S
Sbjct: 276 EDVYKDVNYIWNNCSKYNKKGDYIVDLMKRVKKNFMKYWTS 316
>AT1G58025.2 | Symbols: | DNA-binding bromodomain-containing
protein | chr1:21457755-21461757 REVERSE LENGTH=582
Length = 582
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 179 MKDCEPLLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKLAKG-VYRDP 237
++D ++K++M + A F PV+ L +PDYF +IK PMD GT+ KG Y +
Sbjct: 216 LEDSLIVIKKIMKMEAADPFNVPVNPEALGIPDYFDIIKTPMDFGTICNNFEKGNKYMNS 275
Query: 238 LEFAGDVRLTFSNAMTYNPRGNDVHIMADTLSKYFEVRWKS 278
+ DV ++N YN +G+ + + + K F W S
Sbjct: 276 EDVYKDVNYIWNNCSKYNKKGDYIVDLMKRVKKNFMKYWTS 316
>AT3G54610.1 | Symbols: HAT1, GCN5, HAG1, HAC3, HAG01, BGT | histone
acetyltransferase of the GNAT family 1 |
chr3:20213593-20217375 FORWARD LENGTH=568
Length = 568
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 8/134 (5%)
Query: 141 GLKPSGQSQKPRGWNRGSAEKFXXXXXXXXXXXXXXLLMKDCEPLLKRLMNHQFAWVFKT 200
GL+ +G + P W + F LM+ LLK + +H AW FK
Sbjct: 428 GLREAGWT--PDQWGHTRFKLFNGSADMVTNQKQLNALMR---ALLKTMQDHADAWPFKE 482
Query: 201 PVDVVKLNLPDYFSVIKHPMDLGTVKTKLAKGVYRDPLE-FAGDVRLTFSNAMTYNPRGN 259
PVD ++PDY+ +IK P+DL + ++ Y L+ F D R F+N TYN
Sbjct: 483 PVD--SRDVPDYYDIIKDPIDLKVIAKRVESEQYYVTLDMFVADARRMFNNCRTYNSPDT 540
Query: 260 DVHIMADTLSKYFE 273
+ A L +F
Sbjct: 541 IYYKCATRLETHFH 554
>AT1G20670.1 | Symbols: | DNA-binding bromodomain-containing
protein | chr1:7164537-7167933 REVERSE LENGTH=652
Length = 652
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 185 LLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKLAKGVYRDPLEFAGDV 244
+L RL V+ PVD +L PDYF +IK+PMD T++ KL G Y +F DV
Sbjct: 183 ILDRLQKKDTYGVYSDPVDPEEL--PDYFEIIKNPMDFSTLRNKLDSGAYSTLEQFERDV 240
Query: 245 RLTFSNAMTYN 255
L +NAM YN
Sbjct: 241 FLICTNAMEYN 251
>AT1G76380.1 | Symbols: | DNA-binding bromodomain-containing
protein | chr1:28651416-28654536 REVERSE LENGTH=579
Length = 579
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 185 LLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKLAKGVYRDPLEFAGDV 244
+L R+ V+ P D +L PDY+ +IK+PMD T++ KL G Y +F DV
Sbjct: 152 ILDRVQKKDTYGVYSDPADPEEL--PDYYEIIKNPMDFTTLRKKLESGAYTTLEQFEQDV 209
Query: 245 RLTFSNAMTYN 255
L +NAM YN
Sbjct: 210 FLICTNAMEYN 220
>AT1G76380.2 | Symbols: | DNA-binding bromodomain-containing
protein | chr1:28651416-28654536 REVERSE LENGTH=580
Length = 580
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 185 LLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKLAKGVYRDPLEFAGDV 244
+L R+ V+ P D +L PDY+ +IK+PMD T++ KL G Y +F DV
Sbjct: 153 ILDRVQKKDTYGVYSDPADPEEL--PDYYEIIKNPMDFTTLRKKLESGAYTTLEQFEQDV 210
Query: 245 RLTFSNAMTYN 255
L +NAM YN
Sbjct: 211 FLICTNAMEYN 221
>AT1G76380.3 | Symbols: | DNA-binding bromodomain-containing
protein | chr1:28651416-28654536 REVERSE LENGTH=579
Length = 579
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 185 LLKRLMNHQFAWVFKTPVDVVKLNLPDYFSVIKHPMDLGTVKTKLAKGVYRDPLEFAGDV 244
+L R+ V+ P D +L PDY+ +IK+PMD T++ KL G Y +F +V
Sbjct: 152 ILDRVQKKDTYGVYSDPADPEEL--PDYYEIIKNPMDFTTLRKKLESGAYTTLEQFEANV 209
Query: 245 RLTFSNAMTYN 255
L +NAM YN
Sbjct: 210 FLICTNAMEYN 220