Miyakogusa Predicted Gene

Lj1g3v3750670.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3750670.1 Non Chatacterized Hit- tr|I3T233|I3T233_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,77.19,3e-19,SUBFAMILY NOT NAMED,NULL; CYSTINOSIN,Lysosomal cystine
transporter; PQ-loop,NULL; Repeated motif pre,CUFF.31137.1
         (59 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G40670.1 | Symbols:  | PQ-loop repeat family protein / transm...    96   3e-21

>AT5G40670.1 | Symbols:  | PQ-loop repeat family protein /
          transmembrane family protein | chr5:16285968-16287591
          FORWARD LENGTH=270
          Length = 270

 Score = 96.3 bits (238), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 42/57 (73%), Positives = 51/57 (89%)

Query: 3  SSWNSEPLHVSYEALGWFAFVCWSISFYPQVILNFRRKSVVGLNFDFIVLNLTKHTA 59
          +SWNS PL +SYE +GW AF  WSISFYPQ+ILNFRR+SVVGLNFDF++LNLTKH++
Sbjct: 2  ASWNSIPLEISYEIVGWIAFASWSISFYPQLILNFRRRSVVGLNFDFVMLNLTKHSS 58