Miyakogusa Predicted Gene

Lj1g3v3740570.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3740570.1 Non Chatacterized Hit- tr|I1MLQ8|I1MLQ8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5536
PE=,82.04,0,Fer2_3,Succinate dehydogenase/fumarate reductase
N-terminal; Fer4_17,NULL; dhsB: succinate dehydroge,CUFF.31151.1
         (282 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G40650.1 | Symbols: SDH2-2 | succinate dehydrogenase 2-2 | ch...   435   e-122
AT3G27380.2 | Symbols: SDH2-1 | succinate dehydrogenase 2-1 | ch...   433   e-122
AT3G27380.1 | Symbols: SDH2-1 | succinate dehydrogenase 2-1 | ch...   433   e-122
AT5G65165.1 | Symbols: SDH2-3 | succinate dehydrogenase 2-3 | ch...   315   2e-86

>AT5G40650.1 | Symbols: SDH2-2 | succinate dehydrogenase 2-2 |
           chr5:16281462-16283296 FORWARD LENGTH=280
          Length = 280

 Score =  435 bits (1118), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 204/245 (83%), Positives = 216/245 (88%)

Query: 35  TQDQQGEPKASETTRMKKFQIYRWNPENPTKPELKEYTIKLKDSGPMVLDALIKIKNEVD 94
           ++ Q           +K FQIYRWNP+NP KPEL++Y I LKD GPMVLDALIKIKNE+D
Sbjct: 33  SEAQSKASTGGGGASLKTFQIYRWNPDNPGKPELQDYKIDLKDCGPMVLDALIKIKNEMD 92

Query: 95  QTLTFRRSCREGICGSCAMNIDGCNGLACLTEIPSEAKETTVTPLPHMFGIKDLVVDMTN 154
            +LTFRRSCREGICGSCAMNIDGCNGLACLT+I S +KETT+TPLPHMF IKDLVVDMTN
Sbjct: 93  PSLTFRRSCREGICGSCAMNIDGCNGLACLTKIESGSKETTITPLPHMFVIKDLVVDMTN 152

Query: 155 FYQQYKSIEPWLKRKSPPPVPGKEILQSKKDREKLDGMYECILCACCSTSCPSYWWNPES 214
           FY QYKSIEPWLKRK+P  VPGKEILQSKKDR KLDGMYECILCACCSTSCPSYWWNPES
Sbjct: 153 FYNQYKSIEPWLKRKNPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPES 212

Query: 215 YLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQIQQ 274
           YLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQI  
Sbjct: 213 YLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITH 272

Query: 275 IKSAQ 279
           IK  Q
Sbjct: 273 IKQLQ 277


>AT3G27380.2 | Symbols: SDH2-1 | succinate dehydrogenase 2-1 |
           chr3:10131209-10132673 REVERSE LENGTH=279
          Length = 279

 Score =  433 bits (1114), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 206/246 (83%), Positives = 216/246 (87%), Gaps = 3/246 (1%)

Query: 34  ETQDQQGEPKASETTRMKKFQIYRWNPENPTKPELKEYTIKLKDSGPMVLDALIKIKNEV 93
           ET+   G  + S    +K FQIYRWNP+NP KPEL+ Y I LKD GPMVLDALIKIKNE+
Sbjct: 36  ETKASSGGGRGSN---LKTFQIYRWNPDNPGKPELQNYQIDLKDCGPMVLDALIKIKNEM 92

Query: 94  DQTLTFRRSCREGICGSCAMNIDGCNGLACLTEIPSEAKETTVTPLPHMFGIKDLVVDMT 153
           D +LTFRRSCREGICGSCAMNIDGCNGLACLT+I  EA ETT+TPLPHMF IKDLVVDMT
Sbjct: 93  DPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIQDEASETTITPLPHMFVIKDLVVDMT 152

Query: 154 NFYQQYKSIEPWLKRKSPPPVPGKEILQSKKDREKLDGMYECILCACCSTSCPSYWWNPE 213
           NFY QYKSIEPWLKRK+P  VP KEILQSKKDR KLDGMYECILCACCSTSCPSYWWNPE
Sbjct: 153 NFYNQYKSIEPWLKRKTPASVPAKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPE 212

Query: 214 SYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQIQ 273
           SYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQI 
Sbjct: 213 SYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQIT 272

Query: 274 QIKSAQ 279
            IK  Q
Sbjct: 273 HIKQLQ 278


>AT3G27380.1 | Symbols: SDH2-1 | succinate dehydrogenase 2-1 |
           chr3:10131209-10132673 REVERSE LENGTH=279
          Length = 279

 Score =  433 bits (1114), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 206/246 (83%), Positives = 216/246 (87%), Gaps = 3/246 (1%)

Query: 34  ETQDQQGEPKASETTRMKKFQIYRWNPENPTKPELKEYTIKLKDSGPMVLDALIKIKNEV 93
           ET+   G  + S    +K FQIYRWNP+NP KPEL+ Y I LKD GPMVLDALIKIKNE+
Sbjct: 36  ETKASSGGGRGSN---LKTFQIYRWNPDNPGKPELQNYQIDLKDCGPMVLDALIKIKNEM 92

Query: 94  DQTLTFRRSCREGICGSCAMNIDGCNGLACLTEIPSEAKETTVTPLPHMFGIKDLVVDMT 153
           D +LTFRRSCREGICGSCAMNIDGCNGLACLT+I  EA ETT+TPLPHMF IKDLVVDMT
Sbjct: 93  DPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIQDEASETTITPLPHMFVIKDLVVDMT 152

Query: 154 NFYQQYKSIEPWLKRKSPPPVPGKEILQSKKDREKLDGMYECILCACCSTSCPSYWWNPE 213
           NFY QYKSIEPWLKRK+P  VP KEILQSKKDR KLDGMYECILCACCSTSCPSYWWNPE
Sbjct: 153 NFYNQYKSIEPWLKRKTPASVPAKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPE 212

Query: 214 SYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQIQ 273
           SYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQI 
Sbjct: 213 SYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQIT 272

Query: 274 QIKSAQ 279
            IK  Q
Sbjct: 273 HIKQLQ 278


>AT5G65165.1 | Symbols: SDH2-3 | succinate dehydrogenase 2-3 |
           chr5:26034515-26035922 REVERSE LENGTH=309
          Length = 309

 Score =  315 bits (807), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 154/247 (62%), Positives = 187/247 (75%), Gaps = 4/247 (1%)

Query: 34  ETQDQQGEPKASETTRMKKFQIYRWNPENP-TKPELKEYTIKLKDSGPMVLDALIKIKNE 92
           ++QD   E +       K+F+IYRWNP+ P +KP L+ + + L   GPMVLD L KIK E
Sbjct: 50  KSQDITKEKEGQHKEVKKEFKIYRWNPDKPNSKPFLQSFFVDLSSCGPMVLDVLQKIKAE 109

Query: 93  VDQTLTFRRSCREGICGSCAMNIDGCNGLACLTEI-PSEAKETTVTPLPHMFGIKDLVVD 151
            D +L++RRSCREGICGSC+MNIDG N +ACL  I P+ +K T +TPLPHM+ IKDLVVD
Sbjct: 110 DDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINPNTSKPTIITPLPHMYVIKDLVVD 169

Query: 152 MTNFYQQYKSIEPWLKRKSPPPVPGKEILQSKKDREKLDGMYECILCACCSTSCPSYWWN 211
           +TNFYQQYKS+EPWLK + PP   G+E  QS KDR+KLDG+YECILCACC+TSCPSYWWN
Sbjct: 170 LTNFYQQYKSMEPWLKTRKPPK-DGREHRQSPKDRKKLDGLYECILCACCTTSCPSYWWN 228

Query: 212 PESYLGPAALLHANRWISDSRDEYTKERLEAI-DDEFKLYRCHTILNCARACPKGLNPGK 270
           PE + GPAALL A RWISDSRDEY +ERL+AI + E K+YRC  I NC   CPKGLNP  
Sbjct: 229 PEEFPGPAALLQAYRWISDSRDEYREERLQAITESETKVYRCRAIKNCTATCPKGLNPAS 288

Query: 271 QIQQIKS 277
            I ++KS
Sbjct: 289 AILKMKS 295